mRNA_E-siliculosus-1a_F_contig1233.1458.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1233.1458.1 vs. uniprot
Match: A0A6H5JCW2_9PHAE (Endo/exonuclease/phosphatase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCW2_9PHAE) HSP 1 Score: 889 bits (2297), Expect = 0.000e+0 Identity = 536/606 (88.45%), Postives = 541/606 (89.27%), Query Frame = 3
Query: 153 MSTXXXXXXXXVAILPAKAPLPLLDDGLTVVSFNVLLPNGNDGWWMYKSYQPHVPEEHRVWPFRKALMREYLLSKDADIVCVQEASAETFETDFDFMKDAGYDHVLHTKFRFRSATFFKTSRLELASEKHKDRVLVTGLRTLPPATSVPSSQAPXXXXXXXXXXXXXXXXXXXXXXXXXX---DALPRNSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSNSGKGRLVMVVNCHLTGGPAPERRMRQVLDGLDAARKDAAKLLSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALGTSVPVVVCGDLNSNNGHTAVCELLSAGVVGASFREGGYPETAITSKDKRQGFGPFGDVYEEAYGGGDPAGPGVGGGIGGEPTSTGPPPTFLVPLLHPHFLSEDGKGVSPRLQVALSEAFHSLVRAYGNTARAEDNDXXXXXXXXXXXAGDPATPGAEPEAFLPREGVEAWLMKINRSLGRGSEFRAAEAIMGPGPGGGLTLEDFFSIYASELRGGKFWGVAHDLHALGVELPGGVPWVGPYTARFDRVFYSKATLEAVGAMEPLCEEERELVAGGDCLPNSWHPSDHLAVAGAFRFR 1961
MST VAILPAKAPLPLLDDGLTVVSFNVLLPNGNDGWWMYKSYQPHVPEEHRVWPFRKALMREYLLSKDADIVCVQEASAETFETDFDFMKDAGYDHVLHTKFRFRSATFFKTSRLELASEKHKDRVLVTGLRTLPPATSVPSSQA XXXXXX DA P N G XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX S SGKGRLVMVVNCHLTGGPAPERRMRQVLDGLDAARKDA KLLS XXXXXXXXXXXXXXXXXXXXXXX A GTSVPVVVCGDLNSN+GHTAVCELLS GVVGASFREGGYPETAITSKDKRQGFGPFGD+YEEAYGGGDPAGPGVGGG+GGEPTS GPPPTFLVPLLHPHFLSEDG+GVS RLQVALSEAF+SLV A GNTARAEDND XXXXXXX GDP TPGAEPEAFLPREGVEAWLMKINRSLGRGSEFRAAEAIMGPGPGGGLTLEDFFSIYASELRGGKFWGVAHDLHALGVELPGGVPWVGPYTARFDRVFYSKATLEAVGAMEPLCEEERELVAGGDCLPNSWHPSDHLAVAGAFRFR
Sbjct: 1 MSTSSAAPAPAVAILPAKAPLPLLDDGLTVVSFNVLLPNGNDGWWMYKSYQPHVPEEHRVWPFRKALMREYLLSKDADIVCVQEASAETFETDFDFMKDAGYDHVLHTKFRFRSATFFKTSRLELASEKHKDRVLVTGLRTLPPATSVPSSQAXXXXXXXPPPGNERTEVQEPSEDVDPSSKTDAQPSNRGGSTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXS---SRSGKGRLVMVVNCHLTGGPAPERRMRQVLDGLDAARKDAVKLLSEEAEAAXXXXXXXXXXXXXXXXXXXXXXX---APGTSVPVVVCGDLNSNSGHTAVCELLSTGVVGASFREGGYPETAITSKDKRQGFGPFGDIYEEAYGGGDPAGPGVGGGMGGEPTSNGPPPTFLVPLLHPHFLSEDGEGVSARLQVALSEAFYSLVGACGNTARAEDNDPSPXXXXXXX--GDPTTPGAEPEAFLPREGVEAWLMKINRSLGRGSEFRAAEAIMGPGPGGGLTLEDFFSIYASELRGGKFWGVAHDLHALGVELPGGVPWVGPYTARFDRVFYSKATLEAVGAMEPLCEEERELVAGGDCLPNSWHPSDHLAVAGAFRFR 598
BLAST of mRNA_E-siliculosus-1a_F_contig1233.1458.1 vs. uniprot
Match: D8LJ73_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJ73_ECTSI) HSP 1 Score: 313 bits (803), Expect = 8.180e-98 Identity = 162/219 (73.97%), Postives = 168/219 (76.71%), Query Frame = 3
Query: 1305 GEPTSTGPPPTFLVPLLHPHFLSEDGKGVSPRLQVALSEAFHSLVRAYGNTARAEDNDXXXXXXXXXXXAGDPATPGAEPEAFLPREGVEAWLMKINRSLGRGSEFRAAEAIMGPGPGGGLTLEDFFSIYASELRGGKFWGVAHDLHALGVELPGGVPWVGPYTARFDRVFYSKATLEAVGAMEPLCEEERELVAGGDCLPNSWHPSDHLAVAGAFRFR 1961
G+ GPPP HP E S L +A S ++H R E + DPATPGAEPEAFLPREGVEAWLMKINRSLGRGSEFRAAEAIMGPGPGGGLTLEDFFSIYASELRGGKFWGVAHDLHALGVELPGG+PWVGPYTARFDRVFYSKATLEAVGAMEPLCEEERELVAGGDCLPNSWHPSDHLAVAGAFRFR
Sbjct: 53 GQGARHGPPPP------HPTSGHERAVVASNTLAIATSTSWHRGARTIRRRRPGE-------------ISRDPATPGAEPEAFLPREGVEAWLMKINRSLGRGSEFRAAEAIMGPGPGGGLTLEDFFSIYASELRGGKFWGVAHDLHALGVELPGGIPWVGPYTARFDRVFYSKATLEAVGAMEPLCEEERELVAGGDCLPNSWHPSDHLAVAGAFRFR 252
BLAST of mRNA_E-siliculosus-1a_F_contig1233.1458.1 vs. uniprot
Match: A0A7S4Q6K6_9DINO (Hypothetical protein n=1 Tax=Alexandrium monilatum TaxID=311494 RepID=A0A7S4Q6K6_9DINO) HSP 1 Score: 236 bits (602), Expect = 9.300e-65 Identity = 185/589 (31.41%), Postives = 236/589 (40.07%), Query Frame = 3
Query: 225 DDGLTVVSFNVLLPNGNDGWWMYKSYQPHVPEEHRVWPFRKALMREYLLSKDADIVCVQEASAETFETDFDFMK-DAGYDHVLHTKF-RFRSATFFKTSRLELASEKHKDRVLVTGLRTLPPATSVPSSQAPXXXXXXXXXXXXXXXXXXXXXXXXXXDALPRNSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSNSGKGRLVMVVNCHLTGGPAPERRMRQVLDGLDAARKDAAKLLSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALGTSVPVVVCGDLNSNNGHTAVCELLSAGVVGASFREGGYP------ETAITSKDKRQGFGPFGDVYEEAYGGGDPAGPGVGGGIGGEPTSTGPPPTFLVPLLHPHFLSEDGKGVSPRLQVALSEAFHSLVRAYGNTARAEDNDXXXXXXXXXXXAGDPATPGAEPEAFLPREGVEAWLMKINRSLGRGSEFRAAEAIMGPGPGGGLTLEDFFSIYASELRGGKFWGVAHDLHALGVELPGGVPWVGPYTARFDRVFYSKATLEAVGAMEPLCEEERELVAGG--DCLPNSWHPSDHLAVAGAFRFR 1961
DD +V+S+NVLLPN DGWW+YK Y+ +H WP R+AL++ DI+C+QE S +FE DF F+ D GY+ +LH K R R ATF+K + HKDR L L+ L S GR++ VN HL+ G +RR+RQV + LDA K+ +L A GT PV+ CGD NS G TAV ELL+ G+VG FREGG P + +TSK + Q FGD EEA+ G PP T L + L DG AL EA HS + ++ + + +E WL+ IN LGRGSE+R + L+ EDF +Y EL GKFWGV HDL LG VP GP RFD V+YS+ +L +G EPL EE R V G + LPN+WHPSDHL V AF R
Sbjct: 148 DDVFSVMSYNVLLPNSQDGWWIYKYYRQRG--DHAEWPARQALLKRQFQDASVDILCLQEVSDLSFEDDFGFLSGDLGYEGLLHEKKGRMRPATFWKRGLWQQVGALHKDRTLAVALKRL------------------------------------------------------------------------------------GGSHDGRVIFAVNGHLSAGWNADRRLRQVHEALDALVKECKRL-------------------------------GLEAAGT--PVIFCGDFNSQ-GSTAVRELLTRGIVGPEFREGGDPTERGQEDKPVTSKVRSQAVALFGDAAEEAFAG-------------------SPPATILAADIDSKMLHSDGSPTP-----ALIEAVHSAFKCCSSSGEV-----------------------------MSKGDIERWLVIINGQLGRGSEYRYVMDVCEKAGKDELSAEDFLGLYKEELVEGKFWGVEHDLQVLG-GFGLAVPAEGPCQLRFDYVYYSRGSLRLLGVREPLSEERRGQVFGPPWEILPNAWHPSDHLPVVAAFSLR 562
BLAST of mRNA_E-siliculosus-1a_F_contig1233.1458.1 vs. uniprot
Match: D8LJ74_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJ74_ECTSI) HSP 1 Score: 194 bits (492), Expect = 6.760e-55 Identity = 93/102 (91.18%), Postives = 93/102 (91.18%), Query Frame = 3
Query: 153 MSTXXXXXXXXVAILPAKAPLPLLDDGLTVVSFNVLLPNGNDGWWMYKSYQPHVPEEHRVWPFRKALMREYLLSKDADIVCVQEASAETFETDFDFMKDAGY 458
MST VAILPAK PLPLLDDGLTVVSFNVLLPNGNDGWWMYKSYQPHVPEEHRVWPFRKALMREYLLSKDADIVCVQEASAETFETDFDFMKDAGY
Sbjct: 1 MSTPSSSAAAAVAILPAKTPLPLLDDGLTVVSFNVLLPNGNDGWWMYKSYQPHVPEEHRVWPFRKALMREYLLSKDADIVCVQEASAETFETDFDFMKDAGY 102
BLAST of mRNA_E-siliculosus-1a_F_contig1233.1458.1 vs. uniprot
Match: A0A8J5XUG1_DIALT (Endo/exonuclease/phosphatase domain-containing protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XUG1_DIALT) HSP 1 Score: 181 bits (459), Expect = 8.880e-46 Identity = 182/641 (28.39%), Postives = 232/641 (36.19%), Query Frame = 3
Query: 201 AKAPLPLLDDGL---TVVSFNVLLPNGNDGWWMYKSYQPHVPEE--HRVWPFRKALMREYLLSKDADIVCVQEASAETFETDFDFMKDAGY-DHVLHTKFRFRSATFFKTSRLELASEKHKDRVLVTGLRTLPPATSVPSSQAPXXXXXXXXXXXXXXXXXXXXXXXXXXDALPRNSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSNSGKGRLVMVVNCHLTGGPAPERRMRQVLDGLDAARKDAAKLLSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALGTSVPVVVCGDLNSNNGHTAVCELLSAGVVGASFREGGYPETAITSKDKRQGFGPFGDVYEEAYGGGDPAGPGVGGGIGGEPTSTGPPPTFLVPLLHPHFLSEDGKGVSPRLQVALSEAFHSLVRAYGNTARAEDNDXXXXXXXXXXXAGDPATPGAEPEAFLPREGVEAWLMKINRSLGRGSEFRAAEAIM---------------------------------------GPGPGGG---------LTLEDFFSIYASELRGGKFWGVAHDLHALGVELPGGVPWVGPYTARFDRVFYSKATLEAVGAMEPLCEEERELVAGGDCLPNSWHPSDHLAVAGAFRFR 1961
A +PLP D GL +V+S+NVLLPN DGWW +K Y P E WP R AL+R ++ + DADIVC+QE + +F +DF FM + GY H L+ K RFR ATF++ S + L + H+DR LVT + SG+ + VVNCHL GP RR+RQ+ D +DAA K A K A + V+VCGDLN + +A LL GVV S E G P +TSK K+ GP D PPPT +V L + DG L AY A G P A+ VEAWL++ N LGRGSEFRAA A M P G LT + F +Y +ELR GKFWGVAHD+H LG P +TAR+DR++ S+A L+ + R+ + C PNS PSDHL V R
Sbjct: 14 APSPLPRPDAGLRGVSVLSYNVLLPNSVDGWWTFKMYGPGAIAELSEAEWPARSALLRAHVAAADADIVCLQEVAEVSFASDFAFMAELGYAGHELYKKGRFRPATFWRPS-VALVTASHRDRALVTAF-----------------------------------------------------------------------------------GLAGARSGEVDIT-VVNCHLQAGPEGARRLRQMHDAVDAAVKGARKA--------------------------------GVADAAKMAVIVCGDLNGDE-RSAAIRLLEDGVVDPSHVEDGEP---VTSKPKKLSLGPLTDCAAAVR-------------------ERPPPPTLVVAELISALV--DGGAXXXXXXXXXXXXXXXLRAAYDELA-----------------GGKPHMDAAD---------VEAWLVRTNLKLGRGSEFRAARAEMLGIDSAALSEGDATAASNDAAXXXXXXXXXXXXXXXXXXATAPAGAPLVIPADRVLTWDGFKRVYTAELRAGKFWGVAHDMHVLGHPPPAAPGAPSVFTARYDRIYASEA-LDVIAV--------RDCTSDAPC-PNSLQPSDHLCVGATVVLR 476
BLAST of mRNA_E-siliculosus-1a_F_contig1233.1458.1 vs. uniprot
Match: A0A7S1UNX6_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1UNX6_9STRA) HSP 1 Score: 176 bits (447), Expect = 1.910e-42 Identity = 130/392 (33.16%), Postives = 161/392 (41.07%), Query Frame = 3
Query: 132 SSRPRVVMSTXXXXXXXXVAILPAKAPLPLL-------DDGLTVVSFNVLLPNGNDGWWMYKSYQPHVPEEHRVWPFRKALMREYLLSKDADIVCVQEASAETFETDFDFMKDAGYDHVLHTKFRFRSATFFKTSRLELASEKHKDRVLVTGLRTLPPATSVPSSQAPXXXXXXXXXXXXXXXXXXXXXXXXXXDALPRNSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSNSGKGRLVMVVNCHLTGGPAPERRMRQVLDGL-------DAARKDAAKLLSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALGT--SVPVVVCGDLNSNNGHTAVCELLSAGVVGASFREGGYPETAITSKDKRQGFGPFGDVYEEAY 1259
SS ++ T V ILPA+ PLP D +++S+NVLLPN D WW +K Y V E R WP R L+RE LL ADIVC+QEA +TFE DF FM DAGYDHVLH KFRFR ATFF+ +R + HKDR LVT LR + R++ +VNCHL+GG APERR+RQ+ +GL DA + AKL + ALG + V+V GD NS+ G+TAV +LL G V + E YP +TSK K FG F D E Y
Sbjct: 48 SSTSALLHETDQVDETTSVPILPARQPLPSFFSVDDNDKDQFSLLSWNVLLPNSQDNWWCHKQYASWVDVEKRQWPHRHGLIRERLLESKADIVCIQEADGDTFEDDFAFMSDAGYDHVLHRKFRFRCATFFQRNRFAIEEIAHKDRTLVTSLR------------------------------------------------------------------------------------YTTQQNSSRMLSLVNCHLSGGAAPERRLRQIHEGLEQIRKWTDARERTVAKLRNANRASPKNIAIAEK------------------ALGDFQTGSVIVAGDFNSD-GNTAVRKLLVDGSVEPDWHEPQYPSLRLTSKRKEHSFGSFVDAAELVY 336
BLAST of mRNA_E-siliculosus-1a_F_contig1233.1458.1 vs. uniprot
Match: A0A7S4HMQ6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4HMQ6_9STRA) HSP 1 Score: 170 bits (430), Expect = 1.040e-40 Identity = 139/417 (33.33%), Postives = 170/417 (40.77%), Query Frame = 3
Query: 192 ILPAKAPL--PLLDDG---------LTVVSFNVLLPNGNDGWWMYKSYQPHVPEEHRVWPFRKALMREYLLSKDADIVCVQEASAETFETDFDFMKDAGYDHVLHTKFRFRSATFFKTSRLELASEKHKDRVLVTGLRTLPPATSVPSSQAPXXXXXXXXXXXXXXXXXXXXXXXXXXDALPRNSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSNSGKGRLVMVVNCHLTGGPAPERRMRQVLDGLDAARKDAAKLLSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALGTSVPVVVCGDLNSNNGHTAVCELLSAGVVGASFREGGYPETAITSKDKRQGF-GPFGDVYEEAYGGGDPAGPGVGGGIGGEPTSTGPPPTFLVPLLHPHFLSEDGKGVSPRLQ 1406
ILPA+ PL DD +V+S+N+LLPN D WW +K + P VP E R W R+AL+R+ LL ADIVC+QEA ETFE DF FM++AGY+H LH KFRFR ATFF+ + L HKDR LVT LR S+ S+A + VVNCHL+GG PERR+RQV + LD RK AK+ L V+VCGDLNS+ G T V LL G V +RE YP+ +TSK K F D E AY A G G P+ P T++VP L L G PR Q
Sbjct: 83 ILPARQPLHSAFADDSSGGMPCKQDFSVLSWNILLPNSQDNWWCHKMFAPWVPMEKREWLHRQALIRDRLLLAGADIVCIQEADGETFERDFAFMEEAGYEHCLHRKFRFRCATFFRKDKFALEQVAHKDRTLVTELR------SIDGSRA---------------------------------------------------------------------------------LNVVNCHLSGGAVPERRLRQVHEALDQIRKWKAKVA---------ITLEKQRNARRPSPRNIAKAEDALRLHVEAGVIVCGDLNSD-GDTGVRRLLVEGSVDPDWREPQYPKVPLTSKRKENSIVHSFVDAAELAY-----ASNVCDGDYGESPSLGSRPATYVVPNLASMLLLPINGGGIPRTQ 397
BLAST of mRNA_E-siliculosus-1a_F_contig1233.1458.1 vs. uniprot
Match: A0A7S1EDE4_HEMAN (Hypothetical protein n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S1EDE4_HEMAN) HSP 1 Score: 163 bits (412), Expect = 3.020e-39 Identity = 102/295 (34.58%), Postives = 144/295 (48.81%), Query Frame = 3
Query: 1083 VVVCGDLNSNNGHTAVCELLSAGVVGASFREGGYPETAITSKDKRQGFGPFGDVYEEAYGGGDPAGPGVGGGIGGEPTSTGPPPTFLVPLLHPHFLSEDGKGVSPRLQVALSEAFHSLVRAYGNTARAEDNDXXXXXXXXXXXAGDPATPGAEPEAFLPREGVEAWLMKINRSLGRGSEFRAAEAIMGPGPGGGLTLEDFFSIYASELRGGKFWGVAHDLH---ALGVELPGGVPWVGPYTARFDRVFYSKATLEAVGAMEPLCEEERELVAGGDCLPNSWHPSDHLAVAGAFRF 1958
VVVCGD N ++ +AV +LL+ G V + E YP ++SK K+Q G F D Y PP TF+ PLL F+ E G+ + A+ EA + +A+ + + ++ RE ++AWL+ IN+ LGRGSE R+A +M G L L+DF +Y SEL+ GKFWGV +DL + GV+ G P+ RFD V+++ TL +PL +E+R L A D LPNSWHPSDHL + AFR+
Sbjct: 261 VVVCGDFNDSSEESAVRQLLTKGEVEGGYVEPAYPHVEMSSKAKKQALGTFEDSIAVGY------------------APNPPPSTFIAPLLDTLFVKEGGEEGKVEMTDAVKEA---VGKAFQKVSGGK--------------------------GYMDREDIDAWLVSINKQLGRGSESRSAARLMEERGEGKLLLQDFEEVYLSELKEGKFWGVDYDLDQALSCGVDKSG----EAPFQTRFDYVWHTSETLSVEAVRDPLTQEQRALAAATDPLPNSWHPSDHLIQSCAFRY 504
BLAST of mRNA_E-siliculosus-1a_F_contig1233.1458.1 vs. uniprot
Match: A0A7S0L717_9EUKA (Hypothetical protein n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0L717_9EUKA) HSP 1 Score: 155 bits (392), Expect = 9.100e-39 Identity = 114/299 (38.13%), Postives = 145/299 (48.49%), Query Frame = 3
Query: 1086 VVCGDLNSNNGHTAVCELLSAGVVGASFREGGYP------ETAITSKDKRQGFGPFGDVYEEAYGGGDPAGPGVGGGIGGEPTSTGPPPTFLVPLLHPHFLSEDGKGVSPRLQVALSEAFHSLVRAYGNTARAEDNDXXXXXXXXXXXAGDPATPGAEPEAFLPREGVEAWLMKINRSLGRGSEFRAAEAIMGPGPGGGLTLEDFFSIYASELRGGKFWGVAHDLHAL-GVELPGGVPWVGPYTARFDRVFYSKATLEAVGAMEPLCEEERELVAGGDCLPNSWHPSDHLAVAGAFRFR 1961
VVCGD NS G +AV +LL G V ASFRE G P E +TSK KRQ G F D YE + GE + PT + P L P +++G+ LQ AL+E F +++ A G + A + EAWL+ +NR LGRGSEFRAA A+ L+L DF +IYA+EL+ GKFWG+ HDL + G L P P+TA FD VFY+ + LE G L E+ +V LPN WHPSDHL VA +R
Sbjct: 36 VVCGDFNSQ-GLSAVRQLLVEGEVAASFRESGDPTEARQAEAQVTSKTKRQSLGAFVDAYEA---------------VEGEMRT----PTLIAPCLAPKMATDEGEPTQALLQ-ALAEMF-AVLSADGESLTAAEQ--------------------------------EAWLLAVNRRLGRGSEFRAAAALR-EARNADLSLADFVAIYAAELQAGKFWGIEHDLALVRGAGLTD--PAEPPFTATFDYVFYTSSCLELQGTRASLSPEQAAVVRS---LPNEWHPSDHLPVAVVLAYR 274
BLAST of mRNA_E-siliculosus-1a_F_contig1233.1458.1 vs. uniprot
Match: A0A7S3QA10_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3QA10_9STRA) HSP 1 Score: 164 bits (415), Expect = 2.350e-38 Identity = 123/375 (32.80%), Postives = 159/375 (42.40%), Query Frame = 3
Query: 186 VAILPAKAPLPLL----DDGLTVVSFNVLLPNGNDGWWMYKSYQPHV-----------PEEHRVWPFRKALMREYLLSKDADIVCVQEASAETFETDFDFMKDAGYDHVLHTKFRFRSATFFKTSRLELASEKHKDRVLVTGLRTLPPATSVPSSQAPXXXXXXXXXXXXXXXXXXXXXXXXXXDALPRNSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSNSGKGRLVMVVNCHLTGGPAPERRMRQVLDGLDAARKDAAKLLSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALGTSVPVVVCGDLNSNNGHTAVCELLSAGVVGASFREGGYPETAITSKDKRQGFGPFGDVYEEAYGG 1265
V ILPA+ PLP D+ +++S+N+LLPN D WW +K Y H + H W R++L++E +L D+ C+QEA +TF+ DF+FMKDAGYDHVLH KFRFR ATFF + L HKDR LVT LR T+ S+Q R++ VVNCHL+GG APERR+RQV D +D RK L A ++VCGD NS+ G+TAV +LL G V + E YP+ +TSK + Q FG F D E AYGG
Sbjct: 74 VPILPARQPLPSFFGEHDECFSLLSWNILLPNSIDNWWCHKQYA-HAGGIGIDIXXXNDKAHTQWKHRQSLIKERVLHSAPDVFCMQEADGDTFDADFEFMKDAGYDHVLHKKFRFRCATFFLKDKFLLEQVAHKDRTLVTSLRC---RTTPTSTQ--------------------------------------------------------------------------------RILHVVNCHLSGGAAPERRLRQVHDAVDQIRKWTNVL---------ERTVTQLSKGKRPSPKLVAKAEQALAEYQDAAMIVCGDFNSD-GNTAVRKLLVEGSVEPDWHEPQYPDLRLTSKRREQLFGNFIDAAELAYGG 354 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1233.1458.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig1233.1458.1 >prot_E-siliculosus-1a_F_contig1233.1458.1 ID=prot_E-siliculosus-1a_F_contig1233.1458.1|Name=mRNA_E-siliculosus-1a_F_contig1233.1458.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=649bp MQFDTCFLRASTASWFCLAYLHVASGFGPLGLVQRRTTSSRPRVVMSTSSback to top mRNA from alignment at E-siliculosus-1a_F_contig1233:9457..14202+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_F_contig1233.1458.1 ID=mRNA_E-siliculosus-1a_F_contig1233.1458.1|Name=mRNA_E-siliculosus-1a_F_contig1233.1458.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=4746bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1233:9457..14202+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig1233:9457..14202+ >mRNA_E-siliculosus-1a_F_contig1233.1458.1 ID=mRNA_E-siliculosus-1a_F_contig1233.1458.1|Name=mRNA_E-siliculosus-1a_F_contig1233.1458.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=3894bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1233:9457..14202+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top |