mRNA_E-siliculosus-1a_F_contig1232.1454.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	mRNA_E-siliculosus-1a_F_contig1232.1454.1
Unique Name	mRNA_E-siliculosus-1a_F_contig1232.1454.1
Type	mRNA
Organism	Ectocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)

Homology

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BLAST of mRNA_E-siliculosus-1a_F_contig1232.1454.1 vs. uniprot
Match: A0A6H5JNZ2_9PHAE (VWFA domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNZ2_9PHAE)

HSP 1 Score: 1113 bits (2880), Expect = 0.000e+0
Identity = 584/700 (83.43%), Postives = 604/700 (86.29%), Query Frame = 1

Query:   97 MGRSSLFAAGALSLFLGSVTGQDSCVQVASPTWAATCPCDSDGQYSFTMEGKTTVTANTVNVAVIIDSSGSVDDDEWDMSMAFAKNAISSFADQNLFTNGGSASIAQFSSSASEGGTFYSLEDFNAFVDGSTKYSSGGTDIIDGIAKGRELLKASPATTSFMIVTTDGKSSSPKAEADAARDEGTIVYAVGVGTGPTQEILLDIGGEEANVFDVDGFDELDVALAGILSVSGSSVPCAATGATVTVEFNGMVTGATVDGGSATYXXXXXXXXXXXXEATPTDFEVSLDWCGEPEGGEIIASVSYADDEGNTPDLSSLEGSAVVPTCG---------------------------------------------------------------------VICPKGSHICDDPHMKGLLGQSIDWFGVDGEWYSFVKDPDMDLHVNVRLTAPLPEEFPDRQLVTGLSIISEGHSLVLEVTNPYSTDMNDGCPDGIPTPCLANGGLSVTVDGEKNAGLLHPNRGEILPGGIQVSADNLPVQCWQFGGHKIWARHYEAILARRKLRAQSFEDWVLSFTDMAAHDWCTEYINEKGLTDVQSSHAIYQIVTPAVVVRLNVGIGHQDGDEVDWDGRVLPDLDVWQMDVGLTGLSLENEALTGILGETARPVYDEDGHAVMEGDDAYRGTPEDYRVSGPLGIDFALLHQK 1989
            MGRSSLFAAGALSLFLGSVTGQDSCVQVASPTWAATCPCDSDGQYSFTMEGKTTVTANTVNVAVIIDSSGSV+ DEWDMS+AFAKNA+SSFADQNLFTNGGSASIAQFS+SASEGGTFYSLEDFN FVDGSTKY S GT+II GIAKGRELL ASP TTSFMIV TDG+SSSPK EADAAR EGTIVYAVGVG+GPT+ +LLDI G+++N F VD FDELD    GILS SGSSVPCAATGATVTVEFNGMVTGATVDGGSATYXXXXXXXXXXXXEATPTDFEVSLDWCGEPEGGEIIASVSY DDEGNTPDLSSLEGSAVVPTCG                                                                     VICPKGSHICDDPHMKGLLGQSIDWFGVDGEWYSFVKDPDMDL VNVRLTAPLP++FPDRQLVTGLS+ISEGHSLVLEVTNPYSTD+NDGCPDG PTPCLANGGLSVTVDGEKN GL+HP RGEILPGGI+VSADNLPVQCWQFGGHKIWARHYEAILARRKLRAQSFEDWVLSFTDMAAHDWCTEYI+EKGLT VQSSHAIYQIVTPAVVVRLNVGIGHQDGDEVDWDGRVLPDLDVWQMDVGLTGLSLENEALTGILGETARPVYDEDGHAVM GDDAYRGTPEDYRVSGPLG+DFALLHQK
Sbjct:    1 MGRSSLFAAGALSLFLGSVTGQDSCVQVASPTWAATCPCDSDGQYSFTMEGKTTVTANTVNVAVIIDSSGSVNSDEWDMSIAFAKNAVSSFADQNLFTNGGSASIAQFSNSASEGGTFYSLEDFNDFVDGSTKYQSQGTNIIAGIAKGRELLNASPTTTSFMIVITDGQSSSPKDEADAARAEGTIVYAVGVGSGPTESVLLDIAGDDSNKFSVDDFDELD----GILSASGSSVPCAATGATVTVEFNGMVTGATVDGGSATYXXXXXXXXXXXXEATPTDFEVSLDWCGEPEGGEIIASVSYTDDEGNTPDLSSLEGSAVVPTCGKHARDRVIDDHVGVHVASKGCGDDDVHVSTIFRMERTTDGRCRGQFLHPLQDLGGRALELQKSVKNLGGVICPKGSHICDDPHMKGLLGQSIDWFGVDGEWYSFVKDPDMDLRVNVRLTAPLPDDFPDRQLVTGLSVISEGHSLVLEVTNPYSTDLNDGCPDGSPTPCLANGGLSVTVDGEKNVGLIHPIRGEILPGGIEVSADNLPVQCWQFGGHKIWARHYEAILARRKLRAQSFEDWVLSFTDMAAHDWCTEYISEKGLTGVQSSHAIYQIVTPAVVVRLNVGIGHQDGDEVDWDGRVLPDLDVWQMDVGLTGLSLENEALTGILGETARPVYDEDGHAVMAGDDAYRGTPEDYRVSGPLGMDFALLHQK 696

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BLAST of mRNA_E-siliculosus-1a_F_contig1232.1454.1 vs. uniprot
Match: D8LLU2_ECTSI (Similar to integrin alpha Hr1-like n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLU2_ECTSI)

HSP 1 Score: 587 bits (1513), Expect = 7.990e-201
Identity = 322/327 (98.47%), Postives = 326/327 (99.69%), Query Frame = 1

Query:   97 MGRSSLFAAGALSLFLGSVTGQDSCVQVASPTWAATCPCDSDGQYSFTMEGKTTVTANTVNVAVIIDSSGSVDDDEWDMSMAFAKNAISSFADQNLFTNGGSASIAQFSSSASEGGTFYSLEDFNAFVDGSTKYSSGGTDIIDGIAKGRELLKASPATTSFMIVTTDGKSSSPKAEADAARDEGTIVYAVGVGTGPTQEILLDIGGEEANVFDVDGFDELDVALAGILSVSGSSVPCAATGATVTVEFNGMVTGATVDGGSATYXXXXXXXXXXXXEATPTDFEVSLDWCGEPEGGEIIASVSYADDEGNTPDLSSLEGSAVVPTCG 1077
            MGRSSLFAAGALSLFLGSVTGQDSCVQVASPTWAATCPCDSDGQYSFTMEGKTTVTANTVNVAVIIDSSGSVDDDEWDMSMAFAK+A+SSFADQNLFTNGGSASIAQFSSSASEGGTFYSLEDFNAFVDG+TKYSSGGTDIIDGIAKGRELLKASPATTSFMIVTTDG+SSSPKAEADAARDEGTIVYAVGVGTGPTQEILLDIGGEEANVFDVDGFDELDVALAGILS SGSSVPCAATGATVTVEFNGMVTGATVDGGSATYXXXXXXXXXXXXEATPTDFEVSLDWCGEPEGGEIIASVSYADDEGNTPDLSSLEGSAVVPTCG
Sbjct:    1 MGRSSLFAAGALSLFLGSVTGQDSCVQVASPTWAATCPCDSDGQYSFTMEGKTTVTANTVNVAVIIDSSGSVDDDEWDMSMAFAKDAVSSFADQNLFTNGGSASIAQFSSSASEGGTFYSLEDFNAFVDGNTKYSSGGTDIIDGIAKGRELLKASPATTSFMIVTTDGQSSSPKAEADAARDEGTIVYAVGVGTGPTQEILLDIGGEEANVFDVDGFDELDVALAGILSASGSSVPCAATGATVTVEFNGMVTGATVDGGSATYXXXXXXXXXXXXEATPTDFEVSLDWCGEPEGGEIIASVSYADDEGNTPDLSSLEGSAVVPTCG 327

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BLAST of mRNA_E-siliculosus-1a_F_contig1232.1454.1 vs. uniprot
Match: D7FY49_ECTSI (Similar to collagen, partial n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FY49_ECTSI)

HSP 1 Score: 465 bits (1197), Expect = 2.410e-153
Identity = 253/336 (75.30%), Postives = 280/336 (83.33%), Query Frame = 1

Query:   73 SSGGG-GTTMGRSSLFAAGALSLFLG-SVTGQDSCVQVASPTWAATCPCDSDGQYSFTMEGKTTVTANTVNVAVIIDSSGSVDDDEWDMSMAFAKNAISSFADQNLFTNGGSASIAQFSSSASEGGTFYSLEDFNAFVDGSTKYSSGGTDIIDGIAKGRELLKASPATTSFMIVTTDGKSSSPKAEADAARDEGTIVYAVGVGTGPTQEILLDIGGEEANVFDVDGFDELDVALAGILSVSGSSVPCAATGATVTVEFNGMVTGATVDGGSATYXXXXXXXXXXXXEATPTDFEVSLDWCGEPEGGEIIASVSYADDEGNTPDLSSLEGSAVVPTC 1074
            SSGGG GTTM R SL A GALSLFLG  V GQ+SCVQVA PTWAA CPC++  QYSFTMEG+TTVTANTVNVAVIID+SGSV   +W++S  FAKN ++SFA+QNLFTNGGSAS AQF+S ASEGGTFYSLEDFNAFVD   K+S GGTDIIDGIAKGRELL ASPA TSFMIVTTDG +  P+ EADAAR EGTI+YAVGVG+GP+QE LL IGG+EANVFDVD F+ELD+AL  I+S SG SVPCAATGATVTV+FNGMVT ATVDGG ATY            EATPT+FEV LDWCG+PEG E+IASVSYADDEGNTPDLS+LEG AVVP C
Sbjct:    5 SSGGGIGTTMDRFSLLATGALSLFLGRGVYGQESCVQVADPTWAANCPCEAGSQYSFTMEGQTTVTANTVNVAVIIDASGSVGTADWELSKEFAKNTVASFAEQNLFTNGGSASFAQFASDASEGGTFYSLEDFNAFVDADVKHS-GGTDIIDGIAKGRELLSASPAATSFMIVTTDGAAPDPQDEADAARAEGTILYAVGVGSGPSQENLLAIGGDEANVFDVDNFEELDLALDDIVSTSGGSVPCAATGATVTVQFNGMVTEATVDGGVATYDGGDVVFTVDDLEATPTNFEVWLDWCGQPEGAEVIASVSYADDEGNTPDLSALEGEAVVPVC 339

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BLAST of mRNA_E-siliculosus-1a_F_contig1232.1454.1 vs. uniprot
Match: A0A6H5JRK3_9PHAE (VWFA domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRK3_9PHAE)

HSP 1 Score: 477 bits (1228), Expect = 1.460e-152
Identity = 258/339 (76.11%), Postives = 284/339 (83.78%), Query Frame = 1

Query:   73 SSGGGGTTMGRSSLFAAGALSLFLG-SVTGQDSCVQVASPTWAATCPCDSDGQYSFTMEGKTTVTANTVNVAVIIDSSGSVDDDEWDMSMAFAKNAISSFADQNLFTNGGSASIAQFSSSASEGGTFYSLEDFNAFVDGSTKYSSGGTDIIDGIAKGRELLKASPATTSFMIVTTDGKSSSPKAEADAARDEGTIVYAVGVGTGPTQEILLDIGGEEANVFDVDGFDELDVALAGILSVSGSSVPCAATGATVTVEFNGMVTGATVDGGSATYXXXXXXXXXXXXEATPTDFEVSLDWCGEPEGGEIIASVSYADDEGNTPDLSSLEGSAVVPTCGVIC 1086
            SSGG GTTMGRSSLFA GALSLFLG SV+GQ+SCVQVA PTW   CPC++  QYSFTMEG+TTVTANTVNVAVIID+SGSV   +W++S  FAKN ++SFA+QNLFTNGGSAS AQFSSSASEGGTFYSLEDFNAFVD   KYS GGTDIIDGIAKGRELL ASPA TSFMIVTTDG +  P+ EADAAR EGTI+YAVGVG+GP+QE LL IGG+EANVFDVD F+ELD+AL  I+S SG SVPCAATGATVTV+FNGMVT ATVDGG ATY            EATPT+FEV LDWCG+PEG E+IASVSYADDEGNTPDLS+LEG AVVP C   C
Sbjct:   23 SSGGIGTTMGRSSLFATGALSLFLGGSVSGQESCVQVAYPTWGTNCPCEAGSQYSFTMEGQTTVTANTVNVAVIIDASGSVSTADWELSKEFAKNTVASFAEQNLFTNGGSASFAQFSSSASEGGTFYSLEDFNAFVDADAKYS-GGTDIIDGIAKGRELLSASPAATSFMIVTTDGAAPDPQDEADAARAEGTILYAVGVGSGPSQENLLAIGGDEANVFDVDNFEELDLALEDIVSASGGSVPCAATGATVTVQFNGMVTEATVDGGVATYDGGDVVFTVDDLEATPTNFEVWLDWCGQPEGAEVIASVSYADDEGNTPDLSALEGWAVVPVCDGKC 360

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BLAST of mRNA_E-siliculosus-1a_F_contig1232.1454.1 vs. uniprot
Match: A0A6H5JP35_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JP35_9PHAE)

HSP 1 Score: 444 bits (1141), Expect = 4.770e-145
Identity = 219/300 (73.00%), Postives = 242/300 (80.67%), Query Frame = 1

Query: 1105 CDDPHMKGLLGQSIDWFGVDGEWYSFVKDPDMDLHVNVRLTAPLPEEFPDRQLVTGLSIISEGHSLVLEVTNPYSTDMNDGCPDGIPTPCLANGGLSVTVDGEKNAG---LLHPNRGEILPGGIQVSADNLPVQCWQFGGHKIWARHYEAIL--ARRKLRAQSFEDWVLSFTDMAAHDWCTEYINEKGLTDVQSSHAIYQIVTPAVVVRLNVGIGHQDGDEVDWDGRVLPDLDVWQMDVGLTGLSLENEALTGILGETARPVYDEDGHAVMEGDDAYRGTPEDYRVSGPLGIDFALLHQK 1989
            C D +   LLGQSIDWFG+DG WYS V+DPD+DL+VNVRLTAP PEEFPDRQLVTGLS+++ GHSLV+EVT PY TD   GCPDG P PCLANGGLSV VDGEK A    LLH  R E LPGGIQVSA NLPVQCWQFGG KI ARHY   +   RR L +++FE+WVLSF  MAAHDWCTEYI  K L+DVQS+ AIYQI+TP VVVR NVGIGHQ G  V+ DGR++PDLDVW+MDVGL GLSLENE LTGILGETARPV DE G AVM+G+ AYRGTPEDYRVSG LG DFALL QK
Sbjct:   54 CTDTYAV-LLGQSIDWFGIDGGWYSLVQDPDIDLNVNVRLTAPPPEEFPDRQLVTGLSVMAGGHSLVIEVTKPYDTDTAGGCPDGAPAPCLANGGLSVIVDGEKEADDSPLLHTIRDETLPGGIQVSAANLPVQCWQFGGDKISARHYANTIMEGRRHLLSETFEEWVLSFQHMAAHDWCTEYIAHKDLSDVQSAQAIYQIITPEVVVRFNVGIGHQTGGHVEMDGRIVPDLDVWEMDVGLAGLSLENETLTGILGETARPVLDEHGRAVMKGNKAYRGTPEDYRVSGALGTDFALLRQK 352

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BLAST of mRNA_E-siliculosus-1a_F_contig1232.1454.1 vs. uniprot
Match: D7FHN6_ECTSI (Glycin-rich protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHN6_ECTSI)

HSP 1 Score: 470 bits (1210), Expect = 2.080e-144
Identity = 258/346 (74.57%), Postives = 284/346 (82.08%), Query Frame = 1

Query:   58 NPYVCSSGGG-GTTMGRSSLFAAGALSLFLGS-VTGQDSCVQVASPTWAATCPCDSDGQYSFTMEGKTTVTANTVNVAVIIDSSGSVDDDEWDMSMAFAKNAISSFADQNLFTNGGSASIAQFSSSASEGGTFYSLEDFNAFVDGSTKYSSGGTDIIDGIAKGRELLKASPATTSFMIVTTDGKSSSPKAEADAARDEGTIVYAVGVGTGPTQEILLDIGGEEANVFDVDGFDELDVALAGILSVSGSSVPCAATGATVTVEFNGMVTGATVDGGSATYXXXXXXXXXXXXEATPTDFEVSLDWCGEPEGGEIIASVSYADDEGNTPDLSSLEGSAVVPTCGVICP 1089
            N +  SSGGG GTTMGRSSLFA GALSLFLG  V+GQ+SCVQVA PTW A CPC++  QYSFTMEG+TTVTANTVNVAVIID+S SV   +W++S  FAKN ++SFA QNLFTNGGSAS AQFSS ASEGGTFYSLEDFNAFVD   KYS GGTDIIDGIAKGRELL ASP TTSFMIVTTDG +  P+ EADAAR EGTI+YAVGVG+GP+QE LL IGG+EANVFDVD F+ELD+AL  I+S SG SVPCAATGATVTV+FNGMVT ATVDGG ATY            EATPT+FEV LDWCG+PEG E+IASVSYADDEGNTPDLS+LEG AVVP C    P
Sbjct:    7 NAHQRSSGGGIGTTMGRSSLFATGALSLFLGGRVSGQESCVQVAYPTWGANCPCEAGSQYSFTMEGQTTVTANTVNVAVIIDASVSVGTADWELSKEFAKNTVASFAQQNLFTNGGSASFAQFSSDASEGGTFYSLEDFNAFVDADAKYS-GGTDIIDGIAKGRELLSASPTTTSFMIVTTDGVAPDPQDEADAARAEGTILYAVGVGSGPSQENLLAIGGDEANVFDVDNFEELDLALDDIVSASGGSVPCAATGATVTVQFNGMVTEATVDGGVATYDGGDVVFTIDDLEATPTNFEVWLDWCGQPEGAEVIASVSYADDEGNTPDLSALEGWAVVPVCVPAAP 351

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BLAST of mRNA_E-siliculosus-1a_F_contig1232.1454.1 vs. uniprot
Match: A0A6H5JR61_9PHAE (VWFA domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JR61_9PHAE)

HSP 1 Score: 432 bits (1110), Expect = 1.010e-139
Identity = 244/377 (64.72%), Postives = 275/377 (72.94%), Query Frame = 1

Query:   97 MGRSSLFAAGALSLFLGS-VTGQDSCVQVASPTWAATCPCDSDGQYSFTMEGKTTVTANT-----------------------------------------------VNVAVIIDSSGSVDDDEWDMSMAFAKNAISSFADQNLFTNGGSASIAQFSSSASEGGTFYSLEDFNAFVDGSTKYSS--GGTDIIDGIAKGRELLKASPATTSFMIVTTDGKSSSPKAEADAARDEGTIVYAVGVGTGPTQEILLDIGGEEANVFDVDGFDELDVALAGILSVSGSSVPCAATGATVTVEFNGMVTGATVDGGSATYXXXXXXXXXXXXEATPTDFEVSLDWCGEPEGGEIIASVSYADDEGNTPDLSSLEGSAVVPTCG 1077
            M R SLFA GALSLFLGS V GQ+SCVQVA PTWAA CPC++  QYSFTMEG+TT++ANT                                               VNVAVIIDSSGSV   +W++SM FAKN ++SFA+QNLFTNGGSAS AQFSSSASEGGTFYSLEDF+AFVD  TKY++  G T+II GIAKGRELL ASP TTS+MIVTTDG++ SP+ EADAAR EGTI+YAVGVG+ PT E LL IGG+EANVFDVD F+ELDV L  I+S SG SVPCAAT ATVTV+FNGMVT ATV+GG ATY            EATPT+FEV LDWCG+PEG E+IASVSYADDEGNTPDLS+LEG AVVP CG
Sbjct:    1 MDRFSLFATGALSLFLGSSVYGQESCVQVADPTWAANCPCEAGSQYSFTMEGQTTLSANTDQQAERVDCCVCNTECPWWLDSSCTCGHVTSPDTHLIHPLSRMPMTQVNVAVIIDSSGSVSTADWELSMEFAKNTVASFAEQNLFTNGGSASFAQFSSSASEGGTFYSLEDFDAFVDAETKYATFGGSTNIISGIAKGRELLGASPTTTSYMIVTTDGEADSPQDEADAARAEGTIMYAVGVGSVPTAETLLAIGGDEANVFDVDNFEELDVVLEDIVSASGGSVPCAATAATVTVQFNGMVTEATVEGGVATYDGSDVIFTVDDLEATPTNFEVWLDWCGQPEGAEVIASVSYADDEGNTPDLSALEGEAVVPVCG 377

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BLAST of mRNA_E-siliculosus-1a_F_contig1232.1454.1 vs. uniprot
Match: A0A6H5JS96_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JS96_9PHAE)

HSP 1 Score: 362 bits (930), Expect = 6.900e-113
Identity = 173/307 (56.35%), Postives = 230/307 (74.92%), Query Frame = 1

Query: 1081 ICPKGSHICDDPHMKGLLGQSIDWFGVDGEWYSFVKDPDMDLHVNVRLTAPLPEEFPDRQLVTGLSIISEGHSLVLEVTNPYSTDMNDGCPDGIPTPCLANGGLSVTVDGEKNAGLLHPNRG-EILPGGIQVSADNLPVQCWQFGGHKIWARHYEAIL-ARRKLRA-QSFEDWVLSFTD-MAAHDWCTEYINEKGLTDVQSSHAIYQIVTPAVVVRLNVGIGHQDGDEVDWDGRVLPDLDVWQMDVGLTGLSLENEALTGILGETARPVYDEDGHAVMEGDDAYRGTPEDYRVSGPLGIDFALLHQK 1989
            +CP G  +C DPHM+GL GQ IDW GVDG WYS +KD ++D+++NVRLTAPLP+EFPDRQL+T L+++S+GHS+V+EV NPY T + +GCP+G+ +PCLANGGL + VD ++   LL  +R   +  G + VS+ NLPV+C QFGG +IWAR Y+ ++  RR+L   +S E+W+L +   MAA  WC +YI E  L D+QS HAI++I TP V VRLN G+ +Q   E++WDGRVLPDL+ WQM VG+ GL ++N AL+G+LGETARPVYDE+G  VMEG DA+RGT EDYRVS  L + F LL +K
Sbjct:  104 VCPPGDAVCGDPHMQGLRGQRIDWSGVDGGWYSLIKDDNIDININVRLTAPLPDEFPDRQLMTSLAVLSKGHSVVIEVENPY-TVVTNGCPEGV-SPCLANGGLRIIVDSQQVDELLRFSRHVPVADGAMTVSSSNLPVECQQFGGDRIWARMYQDMIEGRRELHGDESLEEWILKYDHGMAAPGWCAKYIAENDLADLQSDHAIFKIQTPTVTVRLNAGVNYQGNGELNWDGRVLPDLEFWQMGVGMDGLDVDNPALSGLLGETARPVYDENGQVVMEGFDAFRGTIEDYRVSDALDVHFPLLDEK 408

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BLAST of mRNA_E-siliculosus-1a_F_contig1232.1454.1 vs. uniprot
Match: D8LMW2_ECTSI (Imm upregulated 3 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMW2_ECTSI)

HSP 1 Score: 358 bits (919), Expect = 1.040e-112
Identity = 176/297 (59.26%), Postives = 227/297 (76.43%), Query Frame = 1

Query: 1111 DPHMKGLLGQSIDWFGVDGEWYSFVKDPDMDLHVNVRLTAPLPEEFPDRQLVTGLSIISEGHSLVLEVTNPYSTDMNDGCPDGIPTPCLANGGLSVTVDGEKNAGLLHPNRG-EILPGGIQVSADNLPVQCWQFGGHKIWARHYEAILA-RRKLRA-QSFEDWVLSFT-DMAAHDWCTEYINEKGLTDVQSSHAIYQIVTPAVVVRLNVGIGHQDGDEVDWDGRVLPDLDVWQMDVGLTGLSLENEALTGILGETARPVYDEDGHAVMEGDDAYRGTPEDYRVSGPLGIDFALLHQK 1989
            DPHM+GL GQ I+W GVDG WYS VKD   DL +NVR+TAPLP+EFPDRQL+T L+I+SEG+S+V+EV NPY T +  GCP+G+ +PCLANGGL + VDG++   LL  +R   +  G + +SA NLPV+C QFGGH+IWAR Y+ IL  RR+LR  +S E+W+L +  +M A  WC +YI E  L D+Q++HAI++I TP V VRLN G+ +Q   E++WDGRVLPDL+ WQMDVG+ GL ++N AL+G+LGETARPVY E+G AVMEG DA+RGT EDYRVS  LG+ FALL +K
Sbjct:   15 DPHMRGLRGQRINWSGVDGGWYSLVKDDHADLSINVRVTAPLPDEFPDRQLMTSLAIMSEGYSVVIEVENPY-TIVTGGCPEGV-SPCLANGGLRIIVDGQEVDELLRFSRQMPVADGTMTMSASNLPVECRQFGGHRIWARMYQDILEDRRQLRGGESLEEWILRYDQNMPARRWCAKYIAENDLADLQANHAIFKIQTPTVTVRLNAGVNYQGDGELNWDGRVLPDLEFWQMDVGIDGLDVDNPALSGLLGETARPVYGENGEAVMEGSDAFRGTVEDYRVSSALGVHFALLDEK 309

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BLAST of mRNA_E-siliculosus-1a_F_contig1232.1454.1 vs. uniprot
Match: A0A6H5JP37_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JP37_9PHAE)

HSP 1 Score: 322 bits (826), Expect = 2.740e-99
Identity = 161/299 (53.85%), Postives = 212/299 (70.90%), Query Frame = 1

Query: 1099 HICDDPHMKGLLGQSIDWFGVDGEWYSFVKDPDMDLHVNVRLTAPLPEEFPDRQLVTGLSIISEGHSLVLEVTNPYSTDMNDGCPDGIPTPCLANGGLSVTVDGEKNAGLLHPNRGEILPGGIQVSADNLPVQCWQFGGHKIWARHYEAIL-ARRKLRA-QSFEDWVLSFT-DMAAHDWCTEYINEKGLTDVQSSHAIYQIVTPAVVVRLNVGIGHQDGDEVDWDGRVLPDLDVWQMDVGLTGLSLENEALTGILGETARPVYDEDGHAVMEGDDAYRGTPEDYRVSGPLGIDFALLHQ 1986
            HI  DPHM+GLLGQ ++W G DG WYS +KD + DLH+NVR+TAPLP+EFPDRQL+T L+I+SEG+S+V+EV NPY+TD   GCP+ + +PC ANGGL + VDG +   LL  +R              +P      GG +IWAR Y+ IL  RR+LR  +S E+W+L +  +M A  WC +YI E  L D+Q++HAI++I TP V VRLN G+ +Q   E++WDGRVLPDL+ WQ+DVG+ GL ++  AL+G+ GETA PVYDE+G AVMEG DA+RG  EDYRVS  LG+ FALL +
Sbjct:   16 HIWGDPHMRGLLGQRVNWSGFDGGWYSLIKDDNADLHINVRVTAPLPDEFPDRQLMTSLAIMSEGYSVVIEVKNPYTTDTG-GCPEDV-SPCHANGGLRIIVDGHEVDELLRFSR-------------QMP------GGKRIWARMYQDILEGRRQLRGGESLEEWILRYDQNMPARTWCAKYIAENDLADLQANHAIFKIQTPTVTVRLNAGVNYQSNGELNWDGRVLPDLEFWQIDVGIDGLDVDKPALSGLFGETACPVYDENGKAVMEGYDAFRGAVEDYRVSSALGVHFALLDE 293

The following BLAST results are available for this feature:

BLAST of mRNA_E-siliculosus-1a_F_contig1232.1454.1 vs. uniprot

BLAST of mRNA_E-siliculosus-1a_F_contig1232.1454.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A6H5JNZ2_9PHAE	0.000e+0	83.43	VWFA domain-containing protein n=1 Tax=Ectocarpus ...	[more]
D8LLU2_ECTSI	7.990e-201	98.47	Similar to integrin alpha Hr1-like n=1 Tax=Ectocar...	[more]
D7FY49_ECTSI	2.410e-153	75.30	Similar to collagen, partial n=2 Tax=Ectocarpus si...	[more]
A0A6H5JRK3_9PHAE	1.460e-152	76.11	VWFA domain-containing protein n=1 Tax=Ectocarpus ...	[more]
A0A6H5JP35_9PHAE	4.770e-145	73.00	Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA...	[more]
D7FHN6_ECTSI	2.080e-144	74.57	Glycin-rich protein n=1 Tax=Ectocarpus siliculosus...	[more]
A0A6H5JR61_9PHAE	1.010e-139	64.72	VWFA domain-containing protein n=1 Tax=Ectocarpus ...	[more]
A0A6H5JS96_9PHAE	6.900e-113	56.35	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
D8LMW2_ECTSI	1.040e-112	59.26	Imm upregulated 3 n=1 Tax=Ectocarpus siliculosus T...	[more]
A0A6H5JP37_9PHAE	2.740e-99	53.85	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]

Pages

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
E-siliculosus-1a_F_contig1232	contig	E-siliculosus-1a_F_contig1232:6804..16682 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90	2022-09-19
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female	2021-02-24

Properties


Property Name	Value
Start	1
Stop	1
Cds size	1896
Model size	2854
Exons	9
Hectar predicted targeting category	signal peptide
Best eggNOG OG	NA\|NA\|NA
Best tax level	Eukaryota
COG Functional cat.	O
EggNOG OGs	KOG1217@1,KOG1217@2759
EggNOG free text desc.	calcium ion binding
Seed eggNOG ortholog	2880.D8LLU2
Seed ortholog evalue	5.8e-168
Seed ortholog score	597.8
Taxonomic scope	Eukaryota

Relationships

The following UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1622927750.6017764-UTR-E-siliculosus-1a_F_contig1232:6803..7665	1622927750.6017764-UTR-E-siliculosus-1a_F_contig1232:6803..7665	Ectocarpus siliculosus Ec863f_EcPH12_90f female	UTR	E-siliculosus-1a_F_contig1232 6804..7665 -
1696318666.273972-UTR-E-siliculosus-1a_F_contig1232:6803..7665	1696318666.273972-UTR-E-siliculosus-1a_F_contig1232:6803..7665	Ectocarpus siliculosus Ec863f_EcPH12_90f female	UTR	E-siliculosus-1a_F_contig1232 6804..7665 -
1622927750.6954432-UTR-E-siliculosus-1a_F_contig1232:13548..13570	1622927750.6954432-UTR-E-siliculosus-1a_F_contig1232:13548..13570	Ectocarpus siliculosus Ec863f_EcPH12_90f female	UTR	E-siliculosus-1a_F_contig1232 13549..13570 -
1696318666.3779442-UTR-E-siliculosus-1a_F_contig1232:13548..13570	1696318666.3779442-UTR-E-siliculosus-1a_F_contig1232:13548..13570	Ectocarpus siliculosus Ec863f_EcPH12_90f female	UTR	E-siliculosus-1a_F_contig1232 13549..13570 -
1622927750.7078311-UTR-E-siliculosus-1a_F_contig1232:16608..16682	1622927750.7078311-UTR-E-siliculosus-1a_F_contig1232:16608..16682	Ectocarpus siliculosus Ec863f_EcPH12_90f female	UTR	E-siliculosus-1a_F_contig1232 16609..16682 -
1696318666.3860824-UTR-E-siliculosus-1a_F_contig1232:16608..16682	1696318666.3860824-UTR-E-siliculosus-1a_F_contig1232:16608..16682	Ectocarpus siliculosus Ec863f_EcPH12_90f female	UTR	E-siliculosus-1a_F_contig1232 16609..16682 -

The following CDS feature(s) are a part of this mRNA:

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
mRNA_E-siliculosus-1a_F_contig1232.1454.1	prot_E-siliculosus-1a_F_contig1232.1454.1	Ectocarpus siliculosus Ec863f_EcPH12_90f female	polypeptide	E-siliculosus-1a_F_contig1232 7666..13548 -

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at E-siliculosus-1a_F_contig1232:6804..16682-
coding sequence from alignment at E-siliculosus-1a_F_contig1232:6804..16682-

protein sequence of mRNA_E-siliculosus-1a_F_contig1232.1454.1

>prot_E-siliculosus-1a_F_contig1232.1454.1 ID=prot_E-siliculosus-1a_F_contig1232.1454.1|Name=mRNA_E-siliculosus-1a_F_contig1232.1454.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=632bp
MGRSSLFAAGALSLFLGSVTGQDSCVQVASPTWAATCPCDSDGQYSFTME
GKTTVTANTVNVAVIIDSSGSVDDDEWDMSMAFAKNAISSFADQNLFTNG
GSASIAQFSSSASEGGTFYSLEDFNAFVDGSTKYSSGGTDIIDGIAKGRE
LLKASPATTSFMIVTTDGKSSSPKAEADAARDEGTIVYAVGVGTGPTQEI
LLDIGGEEANVFDVDGFDELDVALAGILSVSGSSVPCAATGATVTVEFNG
MVTGATVDGGSATYNGGEVVFTVGDLEATPTDFEVSLDWCGEPEGGEIIA
SVSYADDEGNTPDLSSLEGSAVVPTCGVICPKGSHICDDPHMKGLLGQSI
DWFGVDGEWYSFVKDPDMDLHVNVRLTAPLPEEFPDRQLVTGLSIISEGH
SLVLEVTNPYSTDMNDGCPDGIPTPCLANGGLSVTVDGEKNAGLLHPNRG
EILPGGIQVSADNLPVQCWQFGGHKIWARHYEAILARRKLRAQSFEDWVL
SFTDMAAHDWCTEYINEKGLTDVQSSHAIYQIVTPAVVVRLNVGIGHQDG
DEVDWDGRVLPDLDVWQMDVGLTGLSLENEALTGILGETARPVYDEDGHA
VMEGDDAYRGTPEDYRVSGPLGIDFALLHQK*

mRNA from alignment at E-siliculosus-1a_F_contig1232:6804..16682-

Legend: UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_E-siliculosus-1a_F_contig1232.1454.1 ID=mRNA_E-siliculosus-1a_F_contig1232.1454.1|Name=mRNA_E-siliculosus-1a_F_contig1232.1454.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=9879bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1232:6804..16682- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
CCTCCCCTCTTCATTCCCTCGACTCGGCAACATCAGCAAGATTCTACACA
GATCCCGAACCCCTACGTTTGCAGGTATGGTCTCAACACGCTCCTCCTTG
TAGAACGGCGAGCATGCTGCGTAGCCTACAGCCGTAATAGCCGTCCCTAC
CGTGCTGGGTGCGGCCCTCTCGGGCGTCGGACATTATTTTTTTCCGGCAG
AAGTTGTTGTCGATGAGAACCGACGGAGGAGGGGTTGACGACAATATTTG
CGCTGCTTTGCTGTGGGTCATCTGTGTGTTTTCTCGCGAGCAGTTCGCGT
GAAGAAACACCTGTTGTCTCGCCCATTCATCATGCCTCAAGGAGGCGGTT
GGAGAACGACCGAAACTTATATTTTTGCGTCGGCCTCCCAATGAACGGAA
GATCAGGGATTTGGGGTTGACTGGGGAAGAAGAATCGACCTCAGATGATT
ACTCGACCCGATGAGGACATGATTCGTTGCGATACAGCTTCCGGACGGAT
TTGTAGGAATCCTCTCTGGCTAAGCTAGGCAACGTGTTGATTACGCGTTG
CGTGTTGGCCGTGTTTTGGACGTGGATTGGGGTAGGTAGTGGTTAAGCCC
TGACCAATCAGACATGCCCGAGTTGTCGCCTGAGAGCCCCCTTGATCAAC
CCTCCAGTCTCAGGCATGCCCGACTTGCTTTCTGAGAGGGCTTTTCCTCA
GCAGACGTTTGCCTGAGACATTGTTTTTTCGGACACCACACGTGACAGGG
CCCAAGCACGCAAGGTGCGACTCCTTCCGATGCCTGGACAACCAGGGCAG
GACCTATGTATACAGACTTTTGGGCACGTCTTCACCCCACACACCGCCGC
GGCGCAAATCTAACGCCTCAACAGGTTGCCCAATCTTGTCCGAATTCCGA
CGGGTCCTTGAACCGAAATCTACTCATTTTCCATGTACCCACCATTCTTT
GTCGTACTTTGTGACCTTCTATTGTCCGAAATGTGCTCACTCTTGTCCGA
TTTTATTTTACGAAAATCAACCTCCCGGTCACGGAGTCTTCCACACTTTA
TATACTCTTGCCAAACCGCCCATGGGTGACTCATGGGCTGCCCATTGGCA
CTTTGTTGCCCATGGGGGCACTTTTGGTTGACATGGGCATGTCCATGGGC
ATGCCCATGGGTAGCCCATGGGCAGCCCATGGGCGGCCAATGAGTGTGCC
CTTCAACCGGAACCTGTGTACTCCAAAACATCAGATTTTGAGGTAGGGAA
CGGCCACAGTAACGGCTAATAACCTTAACCCTAACCCCAACCCCAAGCCC
ACACGACACGTGCTAGTGGTGCTGAGTGGCTAAGTTTGTAGGTTGATGTT
CCGATGGCTAAGTTCTTCTTTGATATGCCGGTGGCGAGTTCTAGGTTGAA
GTTCCCACGGTAGGCACTTCGTGGGCAGTTCATGGGCCGCCCATGGGCAG
CCCATGGACGGCCCACGGGTGACCCATGGGTGTAGCAAAACTGTCAGTAG
TGCGGGAGCTTGCCGGTCACCGCACGGGGGAACGTTGGCTCTCACTACGC
TTGTTCAAACAAGCAACCTGAGGAGATAGGCGATTGAAACAACCTTTACC
TCCTTTCATTGGGGAAGATTGCGAAGGGCATGCATGAATACATGAAGGTT
CGCTCCCCGGATTTTTTATCCGTATCGCACCGCCTGCCCTTTGTCCTTCG
AATCCTGTCGTTCGGTCGGGATTGACTACAAAGAAGCGCTTTTTTCTCCC
CGGTGAAAAAAACACTCTCCATAACACCCCACGTGCTCCATTACCGTCTC
TAAACCTGAGCATCGCCGGATAGAAGAGAGAAAGGAAACCTCACACTCTG
GCTGCCTCGGGTGTCACACATCGTGTGCTTACTCTTTTCCTCAGAAATGT
CAACGTGGTCGTCAACTCTGACTGCGCTAGCTAGCGTCCAATTGTTGGCA
GCCTGGAATCCATCGAACACGTTCGCCGCTTGTGGTTTGTCGTGTACAGT
AGTTCACAAATCGTTCGCAACAAACACACGGACGGCAGGCCGCTGAAATA
CCCCGAACATTGTGGCGGTCGTCTTGCTGCGCTGAAACGCTGACTGGTTG
TGCGAGGGTGTCGGATTGTTCCGCCTTTGAGAGATACTTTTAGAGGAGTC
GGCACCCGCCGTCCTCCGTCACTGAAGCTCGCGACATTTCAAAAAAGACT
ATTGTAATCAAGCAGTCCTTGCCCTCTGGCCATTTCCGGGCGCGCGGAAA
TTCTTGGGGTTACCGTAATTGTGCGTGTTATGGTCCGGGGTGCGATCGTT
TTCATTCATTCCTCTCTTGGCTTTATGCCGTACCCCCGGGTGTTCAACAC
CGATGGGCGGCAAAACACCGATACCGGTGCGTAAAACTGGTTTCGATCTA
CATTTTCCACCCTCCCTCCGGTGCGATGACACCGATGGGTGCGATACTGA
ACAAGAGCCACTTACAGGCGCTTCTTGGTACAAGTAGGGCAGCTTTGTGG
TACAGGATCCGTACCAAAGCACCCACTCACACAACCTCGGTAAACACTCG
CCGGTGTCGGCGAATATATGTAGACTATGGCGAATTTCAACTTCTATAGA
AAACTTGGTTTGCCTTCCTCAAGGGGCACGGTACCGGTAGTGCTCCATTT
TGTTCGGTCGGTTGGGGGTGCGGGATGTGTGCTGCGTGCTTGTTTTGGGT
ACCGTAAAAAAAGCCTTGTCTCGCCTCTACGCGTACACCTCGACGGTACG
ATGTGCAAGAAAGTATTGTTGCCCCAATTGATACCTACCGGCACCTCACA
ACCGTTTTTTATTTACGGTTGAAACCGCGCACCGCCAGGGTACCGATACC
TTGCGGGATCATGCAAATTAACGACTTAAGCAGGGTTTCTGTCGTTGATA
TCGATGTCGTCACCGATACCGGTGCTGAACTGCAACAAAAACTCACGTTC
TTTTTTCTTGATTGTGCGAACCCCGGTGCCATATAACCCCGATGGGTGCA
AAATCACCTATGGTTGCCACAACACGTACTCACGTTTGTGTTTCGCACGC
AAGAAGTGATGACCTTGTACACTGTCGTTCTGATCCCACGGCCTCCTACT
ACAACGGCACAGCAGCGGCGGCGGTGGCACAACCATGGGCCGATCTAGTC
TGTTCGCCGCCGGTGCGCTCTCCCTGTTCCTGGGTAGCGTGACCGGCCAG
GACTCGTGCGTCCAGGTGGCGTCCCCGACATGGGCGGCCACCTGCCCCTG
CGACTCGGACGGCCAGTACTCCTTCACGATGGAGGGGAAGACCACGGTGA
CGGCGAACACGGTGAGACCGCTTCTCACCAACCATCCCACACCTACCCCC
GACTTTTGTGCTCCTCTTCCCGTTCGGGGGGCTGCAAGTAACTACCGCAG
CAGCCCCCAGAGTGTGTTCACGGAGTGGTGGTGACGTGTGAAGCTTGGGA
CAGCCCCGACGCTGGCGTACTTTACTGTCGAGTGTCTCGAGCTGCTCGAG
GCCACATATTGTCACAGCAGCAGTGAGTTCCTCCTCGAAAATCTGAATCG
AAAATCTGAATCGTACCTGGGTGGTGAAACGTGTCGGAGAATACTCTGGC
CTGACGTTCGTGGGTTGACGAAAGAAAAGTTGAGTCATCAGCGCTTGCAT
GTATGGTATTGATTTTCTGCATGCGAACAACCGATTGAGTACTACGGTCG
GTTTCTCTGTATAGATGTTGTAGTCAGCAGTGCGTGTGGCATCGCCTGAC
ATCGATCACAGCGGCGTTGACCTTTTCCAAGTCACCACGATCGCCATGCC
GCCGACACACAGGTCAATGTGGCCGTCATTATCGATTCCTCGGGGAGCGT
CGACGACGACGAATGGGACATGTCGATGGCGTTCGCGAAGAACGCTATTT
CTTCCTTCGCCGACCAGAACCTCTTCACCAACGGCGGGAGCGCCTCCATA
GCTCAGTTCTCCAGTTCTGCGTCGGAGGGCGGCACCTTCTACTCTCTCGA
GGACTTCAACGCCTTCGTCGACGGAAGCACCAAGTACTCGTCGGGGGGAA
CCGACATCATCGACGGCATCGCCAAGGGCAGGGAGCTCCTCAAAGCATCT
CCCGCCACCACTTCGTTCATGATCGTCACCACTGACGGAAAATCCTCCAG
TCCTAAGGTCTGCACACAGTCGAAAACCTTACTGGTGTTTCGTTTCATAG
GGCTAGTCTTTACCGAGAACCTCTTCCCGAGCCCGCCGTGTGTGCTACCT
GTCGGGAGTTGTTGCTTGAACCATCGACGTTTCTCGTCCAGCGCAAGGCG
CCTTAGTCTAGGGGGCGGGTATCACATGTGCTACGTAGTACTTTAGTTCC
ATCGAGACGTGGAGGGGGGAGGGAATAGCCACAGATAGGGCCGGATTGGA
TCGGCTAAGTCGATGCTCGCGTTTGCGGGACTGAATCGTCCCGATGCGAA
CTGGGCGAACCAACCATTGCGTCGGGAATCGAATCTACTACCTGCAGAGA
TTCCTTCCACCGAACGAGTTCAGTGAAGTTGACCCTCTCTTGTGTTTTTT
TTTTTGCTCTTGCTCTCGGCGGGTGGACGCTTCTCGATGTACTTCTGTCG
CCGCCAGGCCGAAGCGGACGCCGCCCGAGATGAGGGCACCATCGTGTACG
CCGTCGGGGTGGGTACAGGCCCGACTCAGGAGATCCTTCTCGATATCGGA
GGGGAAGAGGCCAACGTCTTCGACGTCGACGGCTTCGACGAGTTGGACGG
TAAGTGTCTCGCTCCGAAACGTGTGTGTGTAGTTGTTTTTCTTGGTCGCT
CATGATGAGTAGAAAATCTCCCTGTGTCCACGAGAGGGCCGAGGGCGGTG
GGGACACATACGAAAGAAGGACAGCGGTGCACGTTTGACCGTTGTGCGAG
AGCACAGACGGCCTCGGGAACGTTGAGGCGCGCCGCGACCACGACCAAAG
AGCCGGGACTTCCTTCCGCATTGCGCAACCTTCACCCCCCCCATACTCTC
AACCCACGCGTGTTCTCCACCAACGCTTTGCTGCCCCCCACTGACGATCG
TGCCCCCCCCTTCGCCGTCGCCCGCGAACTTGAATCCTCCCACACCTGTA
ACATCTCAGTCGCTCTCGCAGGCATCCTCTCCGTGTCCGGAAGCAGCGTG
CCCTGCGCCGCCACGGGCGCGACGGTGACTGTCGAGTTCAACGGCATGGT
GACGGGGGCCACCGTGGACGGCGGCAGCGCCACCTACAACGGCGGCGAGG
TCGTCTTCACCGTCGGCGACCTCGAGGCTACCCCGACTGACTTCGAGGTC
TCGCTGGACTGGTGCGGAGAGCCCGAGGGCGGCGAGATCATCGCCTCCGT
GTCCTACGCCGACGATGAGGGAAACACGCCCGACCTGTCCTCCCTCGAGG
GGTCGGCAGTCGTGCCCACCTGCGGTAAGCACGCGCATGACAGAGTGATT
GATGATCACGTAGGTGTGCATGTGACGAGCAAGTGCTGCGGTGATGATGA
CGTGCAAATATTTACAATATTTAGGATGGAAAGATCAACATAAGATAGAT
TCGTCTGCTCACACAGGACACATGTTGACACCGCCCGGTTCTCTTGATCT
TCTTGCCGACGGTGAAGGGAAAGGCTGTTGTTCGAATTTATTGTAGCCGT
AGCGCGGTGTTGTATGGTACCCTTTCTGTTCGTTTCCAAACATGCTGCAT
ACATGAAAGTTCACGTGGAACGCAGAGCCGCCCCCATCTTTGAATCTTTC
CAGAACAGTTACTTAACGTGTTGTGGCTGAACTTGGCGCCAGTGCAAGCC
GCGTACGATTTGTGAGACAAGGTCGCACAACGGACCTGCTGCCGCGAATA
ATTTGCTTGTTGCACTTGGTTCTTGCAGCCAGGACAACGCACGAAGCTGT
TGACAACTCGTGACAACCAATTTCTCAACCAGCTTGTCCTCGTACGATCG
TACCTAACGGAACTGCCATCCCTCTTTGGCATATTGGTCCGTCCTCGTTG
TCCGTCCCCATTGATGTACACCCGGCTCGACCACCACTGCCGCACCTGCA
AAACGGAACCAGCCAAACTACAGACCTTGTTCCGCCCTGTGGCCGACGTA
CTACTACTGTAGTCGTCCAAGTCATATACCTACGCGGAATTGCTCCCTGC
CACGTTGGGTAGTCGCGTGGGAGTCAAACCTCTTCTCAGTTTCAAGGAAC
AATCTTTTCGCAGAACTCTGTGGCGTCATCGCTGCAGTAGAGTGATACAC
GGATCTCCTAAGGGTAGATGGACCGTCCTTGCACGTGTCGCGGTCGCCTC
TTCAAGATCTTGGTGGTAGAGAGCTCGAGCTCCAGAAGTCGGTCTGTATC
TAGGGGGTATGTCAGAGCTCGAACATGTGTAGACTATTTGTAGTTACGGC
ACATGGTGGCAATCCGCATCTTGGCCTTCTGTAAGTTGGACAGAAACGCC
ATCTCGACATCGTCACGACCCCCGTCCCTCCGCGCGCGCCCGTACGTACT
GTAGGTGTCATCTGCCCGAAAGGTAGCCACATCTGTGATGACCCCCACAT
GAAGGGCCTGCTCGGCCAGAGTATCGACTGGTTCGGCGTCGACGGTGAGT
GGTACTCCTTTGTTAAGGACCCCGACATGGATCTGCACGTGAACGTGCGG
CTCACGGCGCCTCTCCCCGAAGAGTTTCCTGATCGCCAGCTGGTCACCGG
CCTCTCGATCATTTCTGAGGGACATTCTCTGGTTCTCGAGGTACGACCAT
CAATGCAACACAGCAGGCGGAGCTGTTAGTCGTGGGGCAACCCTTCATCA
GCGTTTCGAAAGTACGTTTGTTTGCAACTTCAGTCTTCGATTTCGGCCTG
ACCATCACGCACAAGGGCACCGTCTTCTTGCGTAGGACAGGGCTCTCCCA
GCTACAGTAGTCGTGCGTCAACTCGCGCGTCATGCGTCGTCTTCCACCAC
CCGTGATATTCACTCGCAATGAAACTCCCTACACATTCGCTGCCATCTGT
CTCGCTTTGGGTCTCTCGTTCACTGTCCGCGTCGCGCGCTTAGGTTCGTG
CATGGTAGGAATGAAGACCTTCCCCACGCTTAAATGGAATGAACCCGCCA
AGTGATCGATCACTGGGCCCACTCGCGGGAATCACGTCCTCCGGTCGTGC
CAACCCATCTCAAATATTTTGCATGTGTCGACCGCATCGAGTTCACTCTT
GAACGGGGCGTCAATGTTGTGTTGCAGCTCGAGATTCGGGGCTCAGCACG
GGGAATCAAGTCTTGGCGGTTAGCTATGGAACGAAGTCGTGATATCCTAC
AGTAAAGGACACAACGAGTGGGAAATTGTCGGGCGTGGAATGCGATTGTT
TAGACGGATATCCAGCGCCATCCAGGTGACCCTTCGAGGGCCGTAATGAT
CTCGGAGAACCTACCTGTTCACACCCACGGTACACACGAAAAACGATCGA
CTCAGGTGACGAACCCCTACTCGACGGACATGAACGACGGCTGCCCCGAC
GGAATCCCGACGCCATGCCTGGCAAACGGCGGACTTAGCGTCACCGTGGA
TGGCGAGAAGAACGCCGGGCTACTGCATCCAAACAGGTACTGTCAGCCGT
ACCGGGAGTGCGTGGGTTAGTTGAAGTAAGTGTCCTATGGATATGCCCCG
GTAACCAGCTTCTTGGTCAGACAGCCACCATGGCTCCCAGCAGAGTCCGG
TAGGAATTGGCATTACTGTACTGTTCACCCGTTGCATCAGTCAAGACTTT
TCCGATCGCAGCGTGACGACTCAGAAACCAGTCACCATCATCGCCCGCAC
CCGCGTGCACATGATATTCTCTGTTTGATCTAGGGGCGAGATTCTACCTG
GCGGCATCCAAGTGTCCGCGGACAACCTCCCGGTACAATGCTGGCAGTTC
GGCGGGCACAAGATCTGGGCCCGCCACTACGAAGCCATTCTGGCGAGGCG
CAAACTGCGCGCCCAGTCCTTCGAAGATTGGGTTTTGAGCTTCACGGACA
TGGCAGCCCACGATTGGTGAGTTGCTCCGCACTTGGCAGCAGCGTGCAAA
GCACCGCAGAGGAAAGGTGCCGTCATTGAACAGATGAAAAGACAGAGATT
TCTGTGCTCGGAGCACGATACCGTACGTGCGTGGCGTGTTTGCGTATGGT
CCAACCACCATCGTCGAGAGAGGATTCGTCGAAGGAGTCGTACATGTATG
CATACTACAGTACGACAGTAGTTGAACGCGCTGTCCCCATGTGTAGGTTA
TCGATAGTAGCAATATCGTGTGCGAACTGGGGAGACTAGGGCACCCCCAA
AAGCTGTCTCTTCCACTGGAGGCTTGGGGCGCGAACGTGACGTTCATCTG
TTCCGTGAACCGACACCATCCCACTTTCCTGCCCTGTCACCACCGACAAG
ACCACGTTCTGTACAACACCCATTCCATAATAAACGGACTGCTGTCACAT
AGTCATGGCATTGCTTTGTGGTCACCTTACACGTGAGTGAGGCAACATGG
TAACCTCATTCTTGCATGCGTAGCTGGCGTGTGTACGGCTTTCGAAGTAT
AACCTGTTCACGACGTTGATCGTTTCACTCGATATCGGCCATGCATGAAC
CGCGGTTCATTCCACATGTCGTGGCCCGTGTCACCGATCGGCCACACCAG
GTGCACCGAATACATCAACGAGAAGGGCCTCACGGACGTCCAGTCGTCCC
ACGCCATATACCAGATCGTCACGCCGGCGGTCGTCGTGCGGCTCAATGTC
GGCATCGGGCACCAGGACGGGGATGAGGTGGACTGGGACGGTCGCGTTCT
CCCAGACCTCGACGTGTGGCAGATGGACGTCGGCCTCACAGGTCTGTCCC
TCGAGAACGAAGCGTTGACCGGAATCCTGGGAGAGACTGCCCGCCCTGTT
TACGACGAGGATGGACACGCCGTGATGGAAGGCGACGACGCCTACCGCGG
GACTCCCGAGGACTACCGTGTGTCCGGTCCCCTGGGGATAGACTTCGCTC
TTCTACACCAGAAGTGATGCGGCGAGGCGACGCCACCGCTGTAGCAGTAG
CATTTCATCGCTTATGCCAAGAGTGTTGGCTTTTAATAGTTTCGGCGTAC
ACATTCCCAACGATGTGACGGTCCCCTTTGCCCCCACGTCAACTCGGTGA
AAAGTTGCGGTGTTTGTGCGGTTGGTCGCCGTTCTTGGGCTTCGGTCCAT
CGAAGGGTGGTGGTCATCATTGCTTCCCGTACAGCAGATAGGGTTATCGA
AGGGCTGCTCATTTTTTCCATCTGTATTGCATGATGAGCCGGCATCGAGT
TATGTAGTTCCGTCCATTGGGTTCTGGTGTTTGTATGTGAACATCCATGT
CTGAAAACTCTTGGTCATGGCTGCATATCCTGTAGGCAATGTCATGTTAC
TGTAGGTCCGAGGTTCGTGCCGGAAATAGATTTCAACATTCATATACTGC
CTACTTACATGTACCATCGTTGGTATTTTCAATTCTCTCTGAATCTTCCA
GCAATGAATGTCCCATCCATTGCTTAAGTATCTCTGTAAAAGAACTATAT
AGATAGTTGTATCGTATGGACATGGCAAAAAGTTAGATGCCATCGCTTAG
ACGCAAGTCAGTGCAAGGGTTGCCAGAACGTACTGGAATTGTTTTGCGTG
CGGGGTACGCGTGAGAACATAGTATACAGCAGCAGTGCTCTATATTTGCC
TGGAACGTACCTCAGCTTGCCAGTGCCGCAATCTGAACACGGTCATTATT
GGTTGATGTTTCTGGGTCGGTGTGAGTCCACAATTTGGGGGATAAGCGCC
CGCCCGCCCTATCCTCTCTTAGAGTTGTTAGCCGTTAGAGTACCCGTTCC
AAAGCAGAGAATCTATTGTTTAGGACTAC

Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig1232:6804..16682-

>mRNA_E-siliculosus-1a_F_contig1232.1454.1 ID=mRNA_E-siliculosus-1a_F_contig1232.1454.1|Name=mRNA_E-siliculosus-1a_F_contig1232.1454.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=3792bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1232:6804..16682- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
ATGGGCCGATCTAGTCTGTTCGCCGCCGGTGCGCTCTCCCTGTTCCTGGG
TAGCGTGACCGGCCAGGACTCGTGCGTCCAGGTGGCGTCCCCGACATGGG
CGGCCACCTGCCCCTGCGACTCGGACGGCCAGTACTCCTTCACGATGGAG
GGGAAGACCACGGTGACGGCGAACACGATGGGCCGATCTAGTCTGTTCGC
CGCCGGTGCGCTCTCCCTGTTCCTGGGTAGCGTGACCGGCCAGGACTCGT
GCGTCCAGGTGGCGTCCCCGACATGGGCGGCCACCTGCCCCTGCGACTCG
GACGGCCAGTACTCCTTCACGATGGAGGGGAAGACCACGGTGACGGCGAA
CACGGTCAATGTGGCCGTCATTATCGATTCCTCGGGGAGCGTCGACGACG
ACGAATGGGACATGTCGATGGCGTTCGCGAAGAACGCTATTTCTTCCTTC
GCCGACCAGAACCTCTTCACCAACGGCGGGAGCGCCTCCATAGCTCAGTT
CTCCAGTTCTGCGTCGGAGGGCGGCACCTTCTACTCTCTCGAGGACTTCA
ACGCCTTCGTCGACGGAAGCACCAAGTACTCGTCGGGGGGAACCGACATC
ATCGACGGCATCGCCAAGGGCAGGGAGCTCCTCAAAGCATCTCCCGCCAC
CACTTCGTTCATGATCGTCACCACTGACGGAAAATCCTCCAGTCCTAAGG
TCAATGTGGCCGTCATTATCGATTCCTCGGGGAGCGTCGACGACGACGAA
TGGGACATGTCGATGGCGTTCGCGAAGAACGCTATTTCTTCCTTCGCCGA
CCAGAACCTCTTCACCAACGGCGGGAGCGCCTCCATAGCTCAGTTCTCCA
GTTCTGCGTCGGAGGGCGGCACCTTCTACTCTCTCGAGGACTTCAACGCC
TTCGTCGACGGAAGCACCAAGTACTCGTCGGGGGGAACCGACATCATCGA
CGGCATCGCCAAGGGCAGGGAGCTCCTCAAAGCATCTCCCGCCACCACTT
CGTTCATGATCGTCACCACTGACGGAAAATCCTCCAGTCCTAAGGCCGAA
GCGGACGCCGCCCGAGATGAGGGCACCATCGTGTACGCCGTCGGGGTGGG
TACAGGCCCGACTCAGGAGATCCTTCTCGATATCGGAGGGGAAGAGGCCA
ACGTCTTCGACGTCGACGGCTTCGACGAGTTGGACGGCCGAAGCGGACGC
CGCCCGAGATGAGGGCACCATCGTGTACGCCGTCGGGGTGGGTACAGGCC
CGACTCAGGAGATCCTTCTCGATATCGGAGGGGAAGAGGCCAACGTCTTC
GACGTCGACGGCTTCGACGAGTTGGACGTCGCTCTCGCAGGCATCCTCTC
CGTGTCCGGAAGCAGCGTGCCCTGCGCCGCCACGGGCGCGACGGTGACTG
TCGAGTTCAACGGCATGGTGACGGGGGCCACCGTGGACGGCGGCAGCGCC
ACCTACAACGGCGGCGAGGTCGTCTTCACCGTCGGCGACCTCGAGGCTAC
CCCGACTGACTTCGAGGTCTCGCTGGACTGGTGCGGAGAGCCCGAGGGCG
GCGAGATCATCGCCTCCGTGTCCTACGCCGACGATGAGGGAAACACGCCC
GACCTGTCCTCCCTCGAGGGGTCGGCAGTCGTGCCCACCTGCGTCGCTCT
CGCAGGCATCCTCTCCGTGTCCGGAAGCAGCGTGCCCTGCGCCGCCACGG
GCGCGACGGTGACTGTCGAGTTCAACGGCATGGTGACGGGGGCCACCGTG
GACGGCGGCAGCGCCACCTACAACGGCGGCGAGGTCGTCTTCACCGTCGG
CGACCTCGAGGCTACCCCGACTGACTTCGAGGTCTCGCTGGACTGGTGCG
GAGAGCCCGAGGGCGGCGAGATCATCGCCTCCGTGTCCTACGCCGACGAT
GAGGGAAACACGCCCGACCTGTCCTCCCTCGAGGGGTCGGCAGTCGTGCC
CACCTGCGGTGTCATCTGCCCGAAAGGTAGCCACATCTGTGATGACCCCC
ACATGAAGGGCCTGCTCGGCCAGAGTATCGACTGGTTCGGCGTCGACGGT
GAGTGGTACTCCTTTGTTAAGGACCCCGACATGGATCTGCACGTGAACGT
GCGGCTCACGGCGCCTCTCCCCGAAGAGTTTCCTGATCGCCAGCTGGTCA
CCGGCCTCTCGATCATTTCTGAGGGACATTCTCTGGTTCTCGAGGTGTCA
TCTGCCCGAAAGGTAGCCACATCTGTGATGACCCCCACATGAAGGGCCTG
CTCGGCCAGAGTATCGACTGGTTCGGCGTCGACGGTGAGTGGTACTCCTT
TGTTAAGGACCCCGACATGGATCTGCACGTGAACGTGCGGCTCACGGCGC
CTCTCCCCGAAGAGTTTCCTGATCGCCAGCTGGTCACCGGCCTCTCGATC
ATTTCTGAGGGACATTCTCTGGTTCTCGAGGTGACGAACCCCTACTCGAC
GGACATGAACGACGGCTGCCCCGACGGAATCCCGACGCCATGCCTGGCAA
ACGGCGGACTTAGCGTCACCGTGGATGGCGAGAAGAACGCCGGGCTACTG
CATCCAAACAGGTGACGAACCCCTACTCGACGGACATGAACGACGGCTGC
CCCGACGGAATCCCGACGCCATGCCTGGCAAACGGCGGACTTAGCGTCAC
CGTGGATGGCGAGAAGAACGCCGGGCTACTGCATCCAAACAGGGGCGAGA
TTCTACCTGGCGGCATCCAAGTGTCCGCGGACAACCTCCCGGTACAATGC
TGGCAGTTCGGCGGGCACAAGATCTGGGCCCGCCACTACGAAGCCATTCT
GGCGAGGCGCAAACTGCGCGCCCAGTCCTTCGAAGATTGGGTTTTGAGCT
TCACGGACATGGCAGCCCACGATTGGGGCGAGATTCTACCTGGCGGCATC
CAAGTGTCCGCGGACAACCTCCCGGTACAATGCTGGCAGTTCGGCGGGCA
CAAGATCTGGGCCCGCCACTACGAAGCCATTCTGGCGAGGCGCAAACTGC
GCGCCCAGTCCTTCGAAGATTGGGTTTTGAGCTTCACGGACATGGCAGCC
CACGATTGGTGCACCGAATACATCAACGAGAAGGGCCTCACGGACGTCCA
GTCGTCCCACGCCATATACCAGATCGTCACGCCGGCGGTCGTCGTGCGGC
TCAATGTCGGCATCGGGCACCAGGACGGGGATGAGGTGGACTGGGACGGT
CGCGTTCTCCCAGACCTCGACGTGTGGCAGATGGACGTCGGCCTCACAGG
TCTGTCCCTCGAGAACGAAGCGTTGACCGGAATCCTGGGAGAGACTGCCC
GCCCTGTTTACGACGAGGATGGACACGCCGTGATGGAAGGCGACGACGCC
TACCGCGGGACTCCCGAGGACTACCGTGTGTCCGGTCCCCTGGGGATAGA
CTTCGCTCTTCTACACCAGAAGTGAGTGCACCGAATACATCAACGAGAAG
GGCCTCACGGACGTCCAGTCGTCCCACGCCATATACCAGATCGTCACGCC
GGCGGTCGTCGTGCGGCTCAATGTCGGCATCGGGCACCAGGACGGGGATG
AGGTGGACTGGGACGGTCGCGTTCTCCCAGACCTCGACGTGTGGCAGATG
GACGTCGGCCTCACAGGTCTGTCCCTCGAGAACGAAGCGTTGACCGGAAT
CCTGGGAGAGACTGCCCGCCCTGTTTACGACGAGGATGGACACGCCGTGA
TGGAAGGCGACGACGCCTACCGCGGGACTCCCGAGGACTACCGTGTGTCC
GGTCCCCTGGGGATAGACTTCGCTCTTCTACACCAGAAGTGA