prot_E-siliculosus-1a_F_contig1230.1447.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig1230.1447.1
Unique Nameprot_E-siliculosus-1a_F_contig1230.1447.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length238
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1230.1447.1 vs. uniprot
Match: D7FZH3_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FZH3_ECTSI)

HSP 1 Score: 432 bits (1111), Expect = 1.090e-151
Identity = 223/238 (93.70%), Postives = 228/238 (95.80%), Query Frame = 0
Query:    1 MGRMSAFRMCLPLALSALAFSTTTGDALVSSAGAGRWSGGHGQHHLQSHSSGWHRVAALGKVETTMTNAAAALPADASPFQAGGASGGGVEDADKIKGRGVSRMWGQYLHALENRPLLTKSLSSGVISGTANLIEQTLSPAAFSLVDWTAFTLVGAVFIGTVLHHWYGFLERMGNSEAITSRIKSKWGRIVLQVVLDQTIGASLVNSGYFACHTVFLAGLTGRAFPLPELGSSIVEKV 238
            MGRMSA RMCL +ALSALAFSTTTGDALVSSAGAGRWSGGH +HHLQS SSGWHR AALGKVETTMTNAA ALPADAS FQAGGASGGGVEDA KIKGRGVSRMWG+YLHALENRPLLTKSLSSGVISGTANLIEQTLSPAAFSLVDW+AFTLVGAVFIGTVLHHWYGFLERMGNSE ITSRIKSKWGR+VLQVVLDQTIGASLVNSGYFACHTV LAGLTGRAFPLPELGSSIVEKV
Sbjct:    1 MGRMSALRMCLLVALSALAFSTTTGDALVSSAGAGRWSGGHCRHHLQSRSSGWHRAAALGKVETTMTNAAEALPADASRFQAGGASGGGVEDAGKIKGRGVSRMWGRYLHALENRPLLTKSLSSGVISGTANLIEQTLSPAAFSLVDWSAFTLVGAVFIGTVLHHWYGFLERMGNSEVITSRIKSKWGRVVLQVVLDQTIGASLVNSGYFACHTVCLAGLTGRAFPLPELGSSIVEKV 238          
BLAST of mRNA_E-siliculosus-1a_F_contig1230.1447.1 vs. uniprot
Match: A0A6H5L3N7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L3N7_9PHAE)

HSP 1 Score: 182 bits (462), Expect = 7.390e-53
Identity = 117/253 (46.25%), Postives = 152/253 (60.08%), Query Frame = 0
Query:    7 FRMCLPLALSALAFSTTTGDALVSSAGAGRWSGGHGQHHLQSHS-SGWHRVAALGKVETTMTNAAA--------------ALPADASPFQAGGASGGG------VEDADKIKGRGVSRMWGQYLHALENRPLLTKSLSSGVISGTANLIEQTLSPAAFSLVDWTAFTLVGAVFIGTVLHHWYGFLERMGNSEAITSRIKSKWGRIVLQVVLDQTIGASLVNSGYFACHTVFLAGLTGRAFPLPELGSSIVEKV 238
            F+M +PL L+AL  ST + +A  +SAG  R S    Q HL   S +G HR AAL  V   M N                 ALP +A   + G  S          ED  +   R +S +WG+YL AL ++PLLTK+LSSGV+SGTAN+IEQTLS A F+   W  F+L G VF G  LH+WY  L+R+GN++A+TSR+  KWGR+  QV++D  IGA+L+N GYFA H +F +  TGR FPLP LG  IVEK+
Sbjct:   24 FKMLVPLGLTALVLSTAS-EAFFTSAGRLRASS---QRHLLLPSCAGRHRGAALDTV-AKMANVTVGDCVDPMLPCASRVALP-NALQTRGGTISSSSSNSSVVAEDKGRSARRRLSVVWGRYLGALNDQPLLTKALSSGVVSGTANIIEQTLSAAKFNWEGWVVFSLTGIVFKGMFLHYWYNILDRLGNAKAVTSRVPGKWGRVSFQVLVDTIIGATLLNCGYFAVHEIFSSITTGRLFPLPGLGLRIVEKI 270          
BLAST of mRNA_E-siliculosus-1a_F_contig1230.1447.1 vs. uniprot
Match: D7FZH5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZH5_ECTSI)

HSP 1 Score: 158 bits (399), Expect = 5.200e-44
Identity = 80/164 (48.78%), Postives = 103/164 (62.80%), Query Frame = 0
Query:   99 RGVSRMWGQYLHALENRPLLTKSLSSGVISGTANLIEQTLSPAAFSLVDWTAFTLVGAVFIGTVLHHWYGFLERM------------------------GNSEAITSRIKSKWGRIVLQVVLDQTIGASLVNSGYFACHTVFLAGLTGRAFPLPELGSSIVEKV 238
            R  S +WG+YL+AL ++PLLTK+LSSGV+SGTAN+IEQTLS A F    W  F+L G VF G  LH+WY  L+R                         GN++ +TSR+  KWGR+  Q ++D  IGA+L+N GYFA H +F A  TGR FPLPELG  IV+K+
Sbjct:   57 RRFSVVWGRYLNALNDQPLLTKALSSGVVSGTANIIEQTLSAAKFDWGGWVVFSLTGIVFKGMFLHYWYNILDRALACCTRWPSLPLLLRGVKSHGQVEGNAKGVTSRVPGKWGRVSFQGMVDTIIGATLLNCGYFAVHEIFSAITTGRLFPLPELGLRIVKKI 220          
BLAST of mRNA_E-siliculosus-1a_F_contig1230.1447.1 vs. uniprot
Match: A0A835YMP8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YMP8_9STRA)

HSP 1 Score: 94.7 bits (234), Expect = 9.780e-20
Identity = 57/159 (35.85%), Postives = 88/159 (55.35%), Query Frame = 0
Query:   87 GGGVEDADKIKGRGVSRMWGQYLHALENRPLLTKSLSSGVISGTANLIEQTLS------PAAFSLVDWTAFTLVGAVFIG-TVLHHWYGFLERMGNSEAITSRIKSKWGRIVLQVVLDQTIGASLVNSGYFACHTVFLAGLTGRAFPLPELGSSIVEKV 238
            GGG  DA   +G    ++W +YL  L+ RPL+TK+ +S +I    + I Q L       P  F     TA  +  AV IG T +H+WY FL++     A  + +K KW R+  Q+ +DQT+G +++N+G++  HT+  A + GR FPL  L  +I  K+
Sbjct:   61 GGG--DAKPSRGA-PQQLWNKYLGQLDRRPLITKAWTSTIIGCIGDTIAQVLEARTKGIPFVFD-TQRTAIYIFCAVAIGSTAVHYWYNFLDQ---KVANPNTVKGKWNRVFRQLAVDQTVGCTVLNAGFYIVHTIVSAVVMGRVFPLGALADTITGKL 212          
BLAST of mRNA_E-siliculosus-1a_F_contig1230.1447.1 vs. uniprot
Match: A0A4D9CLF4_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CLF4_9STRA)

HSP 1 Score: 86.7 bits (213), Expect = 6.300e-17
Identity = 53/150 (35.33%), Postives = 86/150 (57.33%), Query Frame = 0
Query:   83 GGASGGGVEDADKIKGRGVSRMWGQYLHALENRPLLTKSLSSGVISGTANLIEQTL--SPAAFSLVDWT---AFTLVGAVFIGTVLHHWYGFLERMGNSEAITSRIKS-KWGRIVLQVVLDQTIGASLVNSGYFACHTVFLAGLTGRAFP 226
            GGA     E +++  GRG+      YL+AL+ RP+LTKSLSSG+I    +++ Q +   P    +VD      F+ +GA+++G  +H+W+  L+ +  S A+  R+ + K   I+ Q+ +DQ++GASLVNSG+        A +  R FP
Sbjct:   91 GGAFASSSEPSEQ--GRGLLE---GYLNALDTRPILTKSLSSGIICALGDVLSQYIVRPPGIDFVVDMKRLGVFSAMGAIYVGPAIHYWFALLDSLVKSPAVAKRLPNHKTAPILFQLAIDQSLGASLVNSGFLITLWCAQAFVAHRFFP 235          
BLAST of mRNA_E-siliculosus-1a_F_contig1230.1447.1 vs. uniprot
Match: F0Y6G4_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y6G4_AURAN)

HSP 1 Score: 67.4 bits (163), Expect = 6.800e-10
Identity = 37/111 (33.33%), Postives = 59/111 (53.15%), Query Frame = 0
Query:  103 RMWGQYLHALENRPLLTKSLSSGVISGTANLIEQTLSPAAFSLVDWTAFTLVGAVFIGTVLHHWYGFL---ERMGNSEAITSRIKSKWGRIVLQVVLDQTIGASLVNSGYF 210
            R+   Y   L   PL TK  SSG+ S   + + Q ++  AF      +F LVGA +   +LH WY  L   ER   ++ +      +W  ++LQ++L+Q++GA  VN+G+F
Sbjct:   47 RLVAWYDAQLRRHPLRTKVASSGLASAVGDAVAQAVTGGAFDARRCASFALVGAAYFAPILHGWYEVLAARERRWRADGM-----GRWPSVLLQLLLNQSLGALTVNAGFF 152          
BLAST of mRNA_E-siliculosus-1a_F_contig1230.1447.1 vs. uniprot
Match: M2Y2T8_GALSU (Peroxisomal membrane protein-related protein n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2Y2T8_GALSU)

HSP 1 Score: 63.5 bits (153), Expect = 2.800e-8
Identity = 39/117 (33.33%), Postives = 61/117 (52.14%), Query Frame = 0
Query:  108 YLHALENRPLLTKSLSSGVISGTANLIEQTLSPAAFSLVDWT-----AFTLVGAVFIGTVLHHWYGFLERMGNSEAITSRIKSKWGRIVLQVVLDQTIGASLVNSGYFACHTVFLAG 219
            Y+ ALE RP+LTK++++ +I+  ++L+ Q L     SL  W      A    G +F+G   H+WY  LER+  S         +W   + +++LDQT  A+  N  +F   T FL G
Sbjct:  119 YISALEERPILTKAITTSLINAFSDLVAQWLEQRGQSLFHWNIRRTFALGFWGFIFMGPFFHNWYLILERLFPS--------GRWA-FLKKIILDQTFAAAFFNITFFL-GTGFLEG 225          
BLAST of mRNA_E-siliculosus-1a_F_contig1230.1447.1 vs. uniprot
Match: W7TG98_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TG98_9STRA)

HSP 1 Score: 58.5 bits (140), Expect = 7.030e-8
Identity = 27/77 (35.06%), Postives = 47/77 (61.04%), Query Frame = 0
Query:  151 FTLVGAVFIGTVLHHWYGFLERMGNSEAITSRIKS-KWGRIVLQVVLDQTIGASLVNSGYFACHTVFLAGLTGRAFP 226
            F+ +GA+++G  +H+W+  L+ +  S A+  R+ + K   I+ Q+ +DQ++GASLVNSG+        A +  R FP
Sbjct:    7 FSAMGALYVGPAIHYWFALLDSLVKSPAVAKRLPNHKTAPILFQLAIDQSLGASLVNSGFLITLWCAQAFVAHRFFP 83          
BLAST of mRNA_E-siliculosus-1a_F_contig1230.1447.1 vs. uniprot
Match: A0A7S1CGT8_9STRA (Hypothetical protein n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CGT8_9STRA)

HSP 1 Score: 61.2 bits (147), Expect = 1.760e-7
Identity = 29/71 (40.85%), Postives = 44/71 (61.97%), Query Frame = 0
Query:  104 MWGQYLHALENRPLLTKSLSSGVISGTANLIEQTL-SPAAFSLVDWTAFTLVGAVFIGTVLHHWYGFLERM 173
            +W +Y   LE RP+LTKSL+S VI+   ++  QT     +F +V +  F+++G V +G  LH WYG L R+
Sbjct:  108 LWERYAELLETRPILTKSLTSLVITAIGDIACQTFFGDGSFDIVRFAQFSILGGVLVGPGLHFWYGTLNRL 178          
BLAST of mRNA_E-siliculosus-1a_F_contig1230.1447.1 vs. uniprot
Match: UPI00035A2330 (peroxisomal membrane protein 2 n=1 Tax=Aplysia californica TaxID=6500 RepID=UPI00035A2330)

HSP 1 Score: 60.1 bits (144), Expect = 1.790e-7
Identity = 29/90 (32.22%), Postives = 56/90 (62.22%), Query Frame = 0
Query:   89 GVEDADKIKGRGVSRMWGQYLHALENRPLLTKSLSSGVISGTANLIEQTLSP--AAFSLVDWT---AFTLVGAVFIGTVLHHWYGFLERM 173
            G  D  K +   +SR   +Y+  L++RP++TK++++GV+SG  NL+ Q L+P  +    ++W    A++  G +  G ++HH+Y +LE++
Sbjct:    2 GTPDERKKQDSALSRALAEYVRLLQDRPVITKAITNGVVSGFGNLLSQVLAPDVSTGGRMNWRSVFAYSSFGFLVNGPLIHHFYVYLEKI 91          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1230.1447.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FZH3_ECTSI1.090e-15193.70Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A6H5L3N7_9PHAE7.390e-5346.25Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FZH5_ECTSI5.200e-4448.78Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835YMP8_9STRA9.780e-2035.85Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A4D9CLF4_9STRA6.300e-1735.33Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
F0Y6G4_AURAN6.800e-1033.33Uncharacterized protein n=1 Tax=Aureococcus anopha... [more]
M2Y2T8_GALSU2.800e-833.33Peroxisomal membrane protein-related protein n=1 T... [more]
W7TG98_9STRA7.030e-835.06Uncharacterized protein n=1 Tax=Nannochloropsis ga... [more]
A0A7S1CGT8_9STRA1.760e-740.85Hypothetical protein n=1 Tax=Bicosoecida sp. CB-20... [more]
UPI00035A23301.790e-732.22peroxisomal membrane protein 2 n=1 Tax=Aplysia cal... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007248Mpv17/PMP22PANTHERPTHR11266PEROXISOMAL MEMBRANE PROTEIN 2, PXMP2 MPV17coord: 85..216
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 148..167
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 10..20
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 26..147
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..25
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 168..238
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..9
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 21..25
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..25
score: 0.734
NoneNo IPR availableTMHMMTMhelixcoord: 148..170

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig1230contigE-siliculosus-1a_F_contig1230:592..3895 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig1230.1447.1mRNA_E-siliculosus-1a_F_contig1230.1447.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig1230 592..3895 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig1230.1447.1 ID=prot_E-siliculosus-1a_F_contig1230.1447.1|Name=mRNA_E-siliculosus-1a_F_contig1230.1447.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=238bp
MGRMSAFRMCLPLALSALAFSTTTGDALVSSAGAGRWSGGHGQHHLQSHS
SGWHRVAALGKVETTMTNAAAALPADASPFQAGGASGGGVEDADKIKGRG
VSRMWGQYLHALENRPLLTKSLSSGVISGTANLIEQTLSPAAFSLVDWTA
FTLVGAVFIGTVLHHWYGFLERMGNSEAITSRIKSKWGRIVLQVVLDQTI
GASLVNSGYFACHTVFLAGLTGRAFPLPELGSSIVEKV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007248Mpv17_PMP22