mRNA_E-siliculosus-1a_F_contig123.1444.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female
|
Overview
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig123.1444.1 vs. uniprot
Match: D7G6T5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6T5_ECTSI) HSP 1 Score: 216 bits (551), Expect = 1.140e-63 Identity = 134/267 (50.19%), Postives = 164/267 (61.42%), Query Frame = 1
Query: 310 QELYLLVFSTRFLGFFVHSRHFVYHGMTVASSIIPAALTVGI-KYRPCLKASYDASLDRFRLWMHGIVPSFVLAVIVYSWQGLLQYFIGIYHPSAVQFAWIFSEVLEPLAVVPQLLVSRGSADAGRLVWAYVILMGVYRLLYLLDWMYRAHYDHIIKLSPLVAASVFMQTGMYIVFVGNRRVRVSSHLPPHETGDGDIMELTPSARGQLLPDKESDTDSRRNRKRGLDGEVHGESSRETA*RIPKAWRHRAVNIQDDGTVNEIEGVM 1107
QELYL+VF TR+L F VY+ + II ALT+G+ KYRP LKASYDASL YS S V F W FSEVLEPLA+VPQLLV RGS DAGRL W YV LMG YR Y+L+W+YR+HY++ PLV A+ +QTGMY++F+ +R VRVS HLPP ETGD DIME T SAR +LLPD+++DT+ RNR+RGLDGEVHG A A R + + D TV++IE V+
Sbjct: 2 QELYLVVFLTRYLDLFFRFIS-VYNSVMKVVFIILTALTIGMFKYRPSLKASYDASLP-------------------YS------------QTSLVNFLWTFSEVLEPLALVPQLLVFRGSTDAGRLAWTYVTLMGAYRAFYILNWVYRSHYEYGYIHHPLVYAAGIIQTGMYLMFLVDRGVRVSPHLPPDETGDVDIMEPTSSARERLLPDQDTDTEPSRNRERGLDGEVHGRKLSGVA-DAASATSRRGEHQRGDETVSKIESVL 235
BLAST of mRNA_E-siliculosus-1a_F_contig123.1444.1 vs. uniprot
Match: D7FRR1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRR1_ECTSI) HSP 1 Score: 172 bits (437), Expect = 6.790e-48 Identity = 109/220 (49.55%), Postives = 134/220 (60.91%), Query Frame = 1
Query: 205 MNV-SFLASMCRLAAMVLLPCKLHVSRSAAGVSLKTQELYLLVFSTRFLGF-FVHSRHFVYHGMTVASSIIPAALTVG-IKYRPCLKASYDASLDRFRLWMHGIVPSFVLAVIVYSWQGLLQYFIGIYHPSAVQFAWIFSEVLEPLAVVPQLLVSRGSADAGRLVWAYVILMGVYRLLYLLDWMYRAHYDHIIKLSPLVAASVFMQTGMYIVFVGNRRVR 855
MN+ FL M LAA VLLP KLH SRSAAGVSLK QELY++VF TR+ +V S Y+ + + I LT+G +K RP LKASYDASL Y P ++FAW FSEVLEPLAVVPQLLV RGS DAGRL W YV LMG YR LY+L+W+Y ++ D+ + PLV A+ +QTGMY++F+ +RRVR
Sbjct: 2 MNIFEFLGDMSHLAATVLLPYKLHTSRSAAGVSLKMQELYMVVFLTRYSDLLYVFSSW--YNSVMKIAHIFLTGLTIGMLKSRPSLKASYDASLHY-------------------------------YLPGVLRFAWNFSEVLEPLAVVPQLLVFRGSTDAGRLGWTYVTLMGAYRALYILNWVYLSYNDYAYRHHPLVYAAGIVQTGMYLMFLVDRRVR 188
BLAST of mRNA_E-siliculosus-1a_F_contig123.1444.1 vs. uniprot
Match: D8LJM2_ECTSI (PGPS/D6 n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LJM2_ECTSI) HSP 1 Score: 131 bits (329), Expect = 6.550e-32 Identity = 79/211 (37.44%), Postives = 120/211 (56.87%), Query Frame = 1
Query: 205 MNVSFLAS-MCRLAAMVLLPCKLHVSRSAAGVSLKTQELYLLVFSTRFLGFFVHSRHFVYHGMTVASSIIPAALTVGIKYRPCLKASYDASLDRFRLWMHGIVPSFVLAVIVYSWQGLLQYFIGIYHPSAVQFAWIFSEVLEPLAVVPQLLVSRGSADAGRLVWAYVILMGVYRLLYLLDWMYRAHYDHIIKLSPLVAASVFMQTGMYIVF 834
MN+ LA M A++++L KL S+SAAG+SLKTQEL+L+VF TR++ F + M V + + + I+ +KA+YD S D F W + P L ++++SW + + + S + F W FSEVLEP A+VPQL+V + + L YV L+G YR LY+++W+YRAHY+ + LV + +QT +Y F
Sbjct: 1 MNIFRLAGDMSHTASILMLLLKLRASKSAAGISLKTQELFLVVFVTRYVDLFFRFISWYNSIMKVLYITLTSLIIYMIREHIPIKATYDKSQDSFLHWQFAVAPCAALGLLIHSWSW---WTVSMPFSSLINFFWTFSEVLEPFAIVPQLMVLQRYREVENLTGHYVFLLGAYRSLYIVNWVYRAHYEAGYQHHVLVYIAGLVQTLLYADF 208
BLAST of mRNA_E-siliculosus-1a_F_contig123.1444.1 vs. uniprot
Match: A0A3R6V7F2_9STRA (Uncharacterized protein n=4 Tax=Aphanomyces TaxID=100860 RepID=A0A3R6V7F2_9STRA) HSP 1 Score: 118 bits (295), Expect = 4.630e-27 Identity = 74/240 (30.83%), Postives = 123/240 (51.25%), Query Frame = 1
Query: 229 MCRLAAMVLLPCKLHVSRSAAGVSLKTQELYLLVFSTRFLGFFVHSRHFVYHGMTVASSIIPAALTVGIKYRPCLKASYDASLDRFRLWMHGIVPSFVLAVIVYSWQGLLQYFIGIYHPSAVQFAWIFSEVLEPLAVVPQLLVSRGSADAGRLVWAYVILMGVYRLLYLLDWMYRAHYD-HIIKLSPLVAASVFMQTGMYIVFVGNRRVR--VSSHLPPHETGDGDIMELTPSARGQLLP 939
M L + +++ +L SRSA G+SLK+QEL+ LVF+TR+L F H M + + A+ I+++ K+SYD S+D F W ++P +LA+I + ++ W FS LE +A++PQL++ + + L YV+L+G+YR YL++W+YRA + H + P+ A + +QTG+Y+ F VR ++ PP + S + LP
Sbjct: 1 MTHLLSFLVMILRLQASRSATGISLKSQELFFLVFATRYLDLFTHYVSLYNTTMKLLYLGLSGAIVYYIRFKEPFKSSYDKSIDSFLHWKFAVLPCAILALIFHE------------RLEVMEILWTFSLYLEAVAIIPQLILLQRHGEVENLTSNYVVLLGIYRAFYLINWIYRAATETHYHTIWPMFIAGL-VQTGLYVDFFYYYAVRFVAIAYFPPISLTSSTFLSSKYSGKKMTLP 227
BLAST of mRNA_E-siliculosus-1a_F_contig123.1444.1 vs. uniprot
Match: A0A6V1VUP9_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1VUP9_HETAK) HSP 1 Score: 115 bits (289), Expect = 2.650e-26 Identity = 74/211 (35.07%), Postives = 114/211 (54.03%), Query Frame = 1
Query: 205 MNVSFLAS-MCRLAAMVLLPCKLHVSRSAAGVSLKTQELYLLVFSTRFLGFFVHSRHFVYHGMTVASSIIPAALTVGIKYRPCLKASYDASLDRFRLWMHGIVPSFVLAVIVYSWQGLLQYFIGIYHPSAVQFAWIFSEVLEPLAVVPQLLVSRGSADAGRLVWAYVILMGVYRLLYLLDWMYRAHYDHIIKLSPLVAASVFMQTGMYIVF 834
MN+ LA + A++ +L +LH S+SA G+SLKTQEL+L+VF R+L F H M + +A+ ++ +P +A+YDAS D F W + PS VL GL+ I S +++ W FS VLE A++PQL+V + + L Y+ +G+YR LYL +W+YRA+++ + S + QT +YI F
Sbjct: 1 MNIYRLAGDLSHAASIWILLWRLHKSKSALGISLKTQELFLVVFMARYLDLFTHFISLYNSFMKIMYLTSTSAIIYLMRMKPTYRATYDASQDSFLHWQFAVAPSVVL--------GLIISLISAGGFSFMEWMWTFSIVLEATAIIPQLIVLQRYREVENLTGNYIFALGLYRALYLCNWVYRAYHEPNYQHSYVAYLCGVAQTALYIDF 203
BLAST of mRNA_E-siliculosus-1a_F_contig123.1444.1 vs. uniprot
Match: A0A485KUM3_9STRA (Aste57867_12067 protein n=2 Tax=Aphanomyces TaxID=100860 RepID=A0A485KUM3_9STRA) HSP 1 Score: 115 bits (288), Expect = 3.400e-26 Identity = 69/212 (32.55%), Postives = 116/212 (54.72%), Query Frame = 1
Query: 205 MNV-SFLASMCRLAAMVLLPCKLHVSRSAAGVSLKTQELYLLVFSTRFLGFFVHSRHFVYHGMTVASSIIPAALTVGIKYRPCLKASYDASLDRFRLWMHGIVPSFVLAVIVYSWQGLLQYFIGIYHPSAVQFAWIFSEVLEPLAVVPQLLVSRGSADAGRLVWAYVILMGVYRLLYLLDWMYRAHYD-HIIKLSPLVAASVFMQTGMYIVF 834
MN+ + M L + +++ +L SRSA G+SLK+QEL+ L + TR+L F H M + + A+ I+++ K+SYD SLD F W ++P VLA+I + ++ W FS LE +A++PQL++ + + + L YV+L+G+YR YL++W+YRA + H + P++ A + +QTG+Y+ F
Sbjct: 1 MNIFRLIGDMTHLLSFLVMILRLQASRSATGISLKSQELFFLCYVTRYLDLFTHYVSLYNSVMKLLYLGLSGAIVYYIRFKEPFKSSYDKSLDAFLHWKFAVLPCAVLALIFHE------------RLEVMEILWTFSLYLEAVAIIPQLILLQRTGEVENLTSNYVVLLGIYRAFYLINWIYRAATEPHYHTIWPMLIAGL-VQTGLYVDF 199
BLAST of mRNA_E-siliculosus-1a_F_contig123.1444.1 vs. uniprot
Match: B7G303_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7G303_PHATC) HSP 1 Score: 115 bits (288), Expect = 4.360e-26 Identity = 70/212 (33.02%), Postives = 116/212 (54.72%), Query Frame = 1
Query: 202 NMNVSFLAS-MCRLAAMVLLPCKLHVSRSAAGVSLKTQELYLLVFSTRFLGFFVHSRHFVYHGMTVASSIIPAALTVGIKYRPCLKASYDASLDRFRLWMHGIVPSFVLAVIVYSWQGLLQYFIGIYHPSAVQFAWIFSEVLEPLAVVPQLLVSRGSADAGRLVWAYVILMGVYRLLYLLDWMYRAHYDHIIKLSPLVAASVFMQTGMYIVF 834
+MN+ LA MC + ++++L +L V+++A G+SL+T EL+LLVF TR+L F + M V + A++ I+++ +K++Y+ S D F W + P F +A L+ + IG V+ W FS LE +A++PQL+V + + L Y+ MG YR LY+++W+YRAH + K +V +QT +Y F
Sbjct: 2 SMNIFRLAGDMCHVFSIIVLLLRLRVAKNAQGISLRTNELFLLVFVTRYLDLFFNFFSIYNSVMKVLYIVSTASIVYTIRFKEPIKSTYEKSQDTFLHWKFAVAPCFAIA--------LITHLIGSKRFDMVELLWTFSIYLESIAILPQLIVLQRYREVENLTGNYIFFMGAYRALYIVNWIYRAHTEKGYKHHWVVYFCGVVQTLLYADF 205
BLAST of mRNA_E-siliculosus-1a_F_contig123.1444.1 vs. uniprot
Match: W4G348_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=W4G348_9STRA) HSP 1 Score: 113 bits (283), Expect = 1.710e-25 Identity = 68/212 (32.08%), Postives = 114/212 (53.77%), Query Frame = 1
Query: 205 MNV-SFLASMCRLAAMVLLPCKLHVSRSAAGVSLKTQELYLLVFSTRFLGFFVHSRHFVYHGMTVASSIIPAALTVGIKYRPCLKASYDASLDRFRLWMHGIVPSFVLAVIVYSWQGLLQYFIGIYHPSAVQFAWIFSEVLEPLAVVPQLLVSRGSADAGRLVWAYVILMGVYRLLYLLDWMYRAHYD-HIIKLSPLVAASVFMQTGMYIVF 834
MN+ + M L + +++ +L SRSA G+SLK+QEL+ LVF TR+L F H M + + A+ I+++ K+SYD S+D F W ++P +LA+I + ++ W FS LE +A++PQL++ + + L YV+L+G+YR YL++W+YRA + + P+ A + +QTG+Y+ F
Sbjct: 1 MNIFRLIGDMTHLLSFLVMILRLQASRSATGISLKSQELFFLVFITRYLDLFTHYVSLYNTSMKLLYLGLSGAIVYFIRFKEPFKSSYDKSIDSFLHWKFAVLPCAILALIFHE------------RLEVMEILWTFSLYLEAVAIIPQLILLQRHGEVENLTSNYVVLLGIYRAFYLINWIYRAATETQYHTIWPMFIAGL-VQTGLYVDF 199
BLAST of mRNA_E-siliculosus-1a_F_contig123.1444.1 vs. uniprot
Match: A0A067CH71_SAPPC (Uncharacterized protein n=4 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067CH71_SAPPC) HSP 1 Score: 113 bits (282), Expect = 2.370e-25 Identity = 71/211 (33.65%), Postives = 112/211 (53.08%), Query Frame = 1
Query: 205 MNV-SFLASMCRLAAMVLLPCKLHVSRSAAGVSLKTQELYLLVFSTRFLGFFVHSRHFVYHGMTVASSIIPAALTVGIKYRPCLKASYDASLDRFRLWMHGIVPSFVLAVIVYSWQGLLQYFIGIYHPSAVQFAWIFSEVLEPLAVVPQLLVSRGSADAGRLVWAYVILMGVYRLLYLLDWMYRAHYDHIIKLSPLVAASVFMQTGMYIVF 834
MN+ L + +A+ V++ +L RSA+G+SLK+QEL+ LV TR+L F H M + + A+ I+Y+ K+SYD SLD F W ++P +LA+I +L+ W FS LE +A+VPQL++ + + L YV+L+G+YR YLL+W+YRA + L+ + +QTG+Y+ F
Sbjct: 1 MNIFRMLGDITHVASFVVMLLRLQAGRSASGISLKSQELFFLVCVTRYLDLFTHYVSLYNTTMKLLYLTLTGAIVYLIRYKEPFKSSYDKSLDSFLHWKFAVLPCAILAIIFNERFEVLE------------ILWTFSIYLEAVAIVPQLILLQRHGEVENLTSNYVVLLGMYRGFYLLNWIYRAATESQYHTIWLMFIAGIVQTGLYVDF 199
BLAST of mRNA_E-siliculosus-1a_F_contig123.1444.1 vs. uniprot
Match: F0YI66_AURAN (Uncharacterized protein n=2 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YI66_AURAN) HSP 1 Score: 112 bits (281), Expect = 3.520e-25 Identity = 71/206 (34.47%), Postives = 109/206 (52.91%), Query Frame = 1
Query: 217 FLASMCRLAAMVLLPCKLHVSRSAAGVSLKTQELYLLVFSTRFLGFFVHSRHFVYHGMTVASSIIPAALTVGIKYRPCLKASYDASLDRFRLWMHGIVPSFVLAVIVYSWQGLLQYFIGIYHPSAVQFAWIFSEVLEPLAVVPQLLVSRGSADAGRLVWAYVILMGVYRLLYLLDWMYRAHYDHIIKLSPLVAASVFMQTGMYIVF 834
F M + ++++L +L VS+SA G+SLKTQEL+L+VF TR+L F M VA A++ I+++ K+ YD S D F + + P +LA+ + L + V W FS LE LA+VPQL V + + L YV +G YR LY+L+W+YR++Y+ + + LV S +QT +Y+ F
Sbjct: 6 FAGDMSHVVSIIVLILRLRVSKSAVGISLKTQELFLIVFMTRYLDLFTTFYSMYNSFMKVAYITATASIIYMIRFKEPYKSKYDKSQDSFLHFKFAVAPCAMLALFSCLIKREL---------NPVDVLWTFSIFLEALAIVPQLFVLQRYREVENLTGHYVFFLGAYRFLYILNWVYRSYYEPFYRHNWLVYISGAIQTALYVDF 202 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig123.1444.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig123.1444.1 >prot_E-siliculosus-1a_F_contig123.1444.1 ID=prot_E-siliculosus-1a_F_contig123.1444.1|Name=mRNA_E-siliculosus-1a_F_contig123.1444.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=279bp MTWNMNVSFLASMCRLAAMVLLPCKLHVSRSAAGVSLKTQELYLLVFSTRback to top mRNA from alignment at E-siliculosus-1a_F_contig123:46263..57615+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_F_contig123.1444.1 ID=mRNA_E-siliculosus-1a_F_contig123.1444.1|Name=mRNA_E-siliculosus-1a_F_contig123.1444.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=11353bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig123:46263..57615+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig123:46263..57615+ >mRNA_E-siliculosus-1a_F_contig123.1444.1 ID=mRNA_E-siliculosus-1a_F_contig123.1444.1|Name=mRNA_E-siliculosus-1a_F_contig123.1444.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=1674bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig123:46263..57615+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top |