prot_E-siliculosus-1a_F_contig12256.1423.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig12256.1423.1
Unique Nameprot_E-siliculosus-1a_F_contig12256.1423.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length106
Homology
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BLAST of mRNA_E-siliculosus-1a_F_contig12256.1423.1 vs. uniprot
Match: D8LEP5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEP5_ECTSI)

HSP 1 Score: 145 bits (365), Expect = 2.940e-38
Identity = 72/102 (70.59%), Postives = 86/102 (84.31%), Query Frame = 0 
Query:    3 VDVDKLSATCQRLLREARAKVLKDSKEAPKKTGEGTIDPEEPSELAAKSSLEYHTALAVRYGDYAKEQGMSKGKVAKEHTLWAGSTRNGSTEDLFVARGGRG 104
            V +DKL  TCQRL+R+A+ K+ K+ ++APKKTGEGT+DPEEPSE A KSSLE+HTALAV+Y  YAKEQ MSKGKVAKEH  WAGSTRN +T+D+F  RGGRG
Sbjct:  156 VAMDKLVDTCQRLVRDAKKKIEKEQRDAPKKTGEGTVDPEEPSEEAMKSSLEHHTALAVQYDLYAKEQSMSKGKVAKEHAEWAGSTRNSNTDDIFSLRGGRG 257
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BLAST of mRNA_E-siliculosus-1a_F_contig12256.1423.1 vs. uniprot
Match: A0A6H5JTZ7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTZ7_9PHAE)

HSP 1 Score: 139 bits (351), Expect = 1.130e-36
Identity = 73/102 (71.57%), Postives = 82/102 (80.39%), Query Frame = 0 
Query:    3 VDVDKLSATCQRLLREARAKVLKDSKEAPKKTGEGTIDPEEPSELAAKSSLEYHTALAVRYGDYAKEQGMSKGKVAKEHTLWAGSTRNGSTEDLFVARGGRG 104
            V +DKL  TCQRLLREA+ K+ K+ K+A KKTGEGT DP+EPSE A KSSLE+HTALAV+Y  YAKEQGMSKGKV KEH  WAGS  N +TEDLF  RGGRG
Sbjct:   67 VAIDKLVDTCQRLLREAKKKIEKEQKDALKKTGEGTEDPKEPSEEAEKSSLEHHTALAVQYDLYAKEQGMSKGKVGKEHAEWAGSMSNSNTEDLFSLRGGRG 168
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig12256.1423.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LEP5_ECTSI2.940e-3870.59Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JTZ7_9PHAE1.130e-3671.57Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig12256contigE-siliculosus-1a_F_contig12256:562..1492 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig12256.1423.1mRNA_E-siliculosus-1a_F_contig12256.1423.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig12256 560..1492 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig12256.1423.1 ID=prot_E-siliculosus-1a_F_contig12256.1423.1|Name=mRNA_E-siliculosus-1a_F_contig12256.1423.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=106bp
GAVDVDKLSATCQRLLREARAKVLKDSKEAPKKTGEGTIDPEEPSELAAK
SSLEYHTALAVRYGDYAKEQGMSKGKVAKEHTLWAGSTRNGSTEDLFVAR
GGRGAG
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