mRNA_E-siliculosus-1a_F_contig1223.1405.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female
|
Overview
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1223.1405.1 vs. uniprot
Match: D7FUN3_ECTSI (Arsenite translocating ATPase like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUN3_ECTSI) HSP 1 Score: 877 bits (2265), Expect = 0.000e+0 Identity = 467/496 (94.15%), Postives = 469/496 (94.56%), Query Frame = 2
Query: 170 MPHPPALRMCQSLPTALLSLAYLTASSTTAFVLGPLRASRVTSANNRXXXXXXXXXXXXXXXXXXXXXXXXXRCPTSTRLLAGSASSALTPTAPQAGLRKARSSRSGGVRSLKSVAAPAGLEKGVSARGLGELLEARNGVNERFVFFGGKGGVGKTSTAAAVAIQCADAGLRTLVISTDPAHSLGDALDQDVSGGEPVRIIGLDNLSAMEVDTVEAVKEFEEALSSFDISGMAEEMGVPKDMVESLGLSEFSEVLANPPPGIDELVALSRVLKLARSEEQKFDRIIIDTAPTGHTLRLLGFPDFLDNFLEKVIQLRGRMGGILNLLTGMFGGGTNVVEKADMAVEKLQGYKETMMELRDLFKNQDATEFCIVTIPTQLAIAESKRLLEALNTQGVAVRNIVVNQIVSPDSGPEYVARLHKGQSACIGRLQKLADGAGGGAADGALDISPVPYFDMEVAGVYPLRYLGTAAYGGGNEGNWKQLSSDAEQRFIILGGK 1657
MPHPPALRMCQSLPTALLSLAYLTASSTTAFVLGPLRASRVTSA+NR RCPTSTRLLAGSASSALTPTAPQAGLRKARSSRSGGVRSLKSVAAPAGLEKGVSARGLGELLEARNGVNERFVFFGGKGGVGKTSTAAAVAIQCADAGLRTLVISTDPAHSLGDALDQDVSGGEPVRIIGLDNLSAMEVDTVEAVKEFEEALSSFDISGMAEEMGVPKDMVESLGLSEFSEVLANPPPGIDELVALSRVLKLARSEEQKFDRIIIDTAPTGHTLRLLGFPDFL+NFLEKVIQLRGRMGGILNLLTGMFGGGTNVVEKADMAVEKLQGYKE MMELRDLFKNQDATEFCIVTIPTQLAIAESKRLLEALNTQGVAVRNIVVNQIVSPDSGPEYVARLHKGQSACIGRLQKLADGA GGAADGALDISPVPYFDMEVAGVYPLRYLGTAAYGGGNEGNWKQLSSDAEQRFIILGGK
Sbjct: 1 MPHPPALRMCQSLPTALLSLAYLTASSTTAFVLGPLRASRVTSASNRRALLPAAAAYRRLTSASQHQQRPQRRCPTSTRLLAGSASSALTPTAPQAGLRKARSSRSGGVRSLKSVAAPAGLEKGVSARGLGELLEARNGVNERFVFFGGKGGVGKTSTAAAVAIQCADAGLRTLVISTDPAHSLGDALDQDVSGGEPVRIIGLDNLSAMEVDTVEAVKEFEEALSSFDISGMAEEMGVPKDMVESLGLSEFSEVLANPPPGIDELVALSRVLKLARSEEQKFDRIIIDTAPTGHTLRLLGFPDFLENFLEKVIQLRGRMGGILNLLTGMFGGGTNVVEKADMAVEKLQGYKERMMELRDLFKNQDATEFCIVTIPTQLAIAESKRLLEALNTQGVAVRNIVVNQIVSPDSGPEYVARLHKGQSACIGRLQKLADGAAGGAADGALDISPVPYFDMEVAGVYPLRYLGTAAYGGGNEGNWKQLSSDAEQRFIILGGK 496
BLAST of mRNA_E-siliculosus-1a_F_contig1223.1405.1 vs. uniprot
Match: A0A7S0NW41_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0NW41_9EUKA) HSP 1 Score: 332 bits (851), Expect = 3.260e-103 Identity = 176/380 (46.32%), Postives = 255/380 (67.11%), Query Frame = 2
Query: 545 SARGLGELLEARNGVNERFVFFGGKGGVGKTSTAAAVAIQCADAGLRTLVISTDPAHSLGDALDQDVSGGEPVRIIGLDNLSAMEVDTVEAVKEFEEALSSFDISGMAEEMG-VPKDMVESLGLSEFSEVLANPPPGIDELVALSRVLKLARSEEQK--------FDRIIIDTAPTGHTLRLLGFPDFLDNFLEKVIQLRGRMGGILNLLTGMFGGGTNVVEKADMAVEKLQGYKETMMELRDLFKNQDATEFCIVTIPTQLAIAESKRLLEALNTQGVAVRNIVVNQIVSPDSGPEYVARLHKGQSACIGRLQKLADGAGGGAADGALDISPVPYFDMEVAGVYPLRYLGTAAYGGGNEGNWKQLSSDAEQRFIILGGK 1657
+ R L +LLE R+ +R +F GGKGGVGKTST++A+A++CAD GL TL++STDPAHSL DAL QDVSGG PV ++G LSAMEV+T +AV+ F EA+ F + + +G V ++ + LGL EF+++L N PPG+DEL+AL+ VL R E FDR+I DTAPTGHTLRLL FPDF+ L K++ L+GR+ G L LL G+ G G N +K ++AVE+LQ ++E + L+ L K++D T+F +V+IP++LA+AES RLL +L Q + VR++VVNQ+++ + P Y+ R+ + Q+ + + G + L S VP+FDME+ G+Y L++LG A+ G N W L + E+RF+++GGK
Sbjct: 35 ATRPLAQLLE-RDSTQQRLIFVGGKGGVGKTSTSSAIALRCADKGLSTLIVSTDPAHSLSDALVQDVSGGSPVLVMGCMGLSAMEVETDKAVERFREAVGGFRAADLG--LGSVAEEAIGKLGLDEFADILDNTPPGLDELLALTEVLSFVRPPEADGGEMEAATFDRVIFDTAPTGHTLRLLAFPDFIQKLLSKLVALKGRLLGALGLLQGVLGAGVNPAQKLELAVERLQRWRERVERLQALLKDEDVTDFIVVSIPSRLAVAESARLLSSLVEQDIPVRHLVVNQLLTERAPPGYLQRVREEQARALSSVDA------GASPLSTLSTSRVPFFDMEMRGIYALQFLGKMAFDGVNAAAWSNLLNAREERFVLVGGK 405
BLAST of mRNA_E-siliculosus-1a_F_contig1223.1405.1 vs. uniprot
Match: A0A0G4FEQ3_VITBC (Uncharacterized protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4FEQ3_VITBC) HSP 1 Score: 304 bits (778), Expect = 2.570e-90 Identity = 175/397 (44.08%), Postives = 248/397 (62.47%), Query Frame = 2
Query: 557 LGELLEARNG-VNERFVFFGGKGGVGKTSTAAAVAIQCADAGLRTLVISTDPAHSLGDALDQDVSG--GEPVRIIGLDNLSAMEVDTVEAVKEFEEALSSFDISGMAEEMGVPKDMVESLGLSEFSEVLANPPPGIDELVALSRVLKLAR------SEEQKFDRIIIDTAPTGHTLRLLGFPDFLDNFLEKVIQLRGRMGGILNLLTGMFG---GGTNVVEKA---DMAVEKLQGYKETMMELRDLFKNQDATEFCIVTIPTQLAIAESKRLLEALNTQGVAVRNIVVNQIVSPDSGPE---------------YVARLHKGQSACIGRLQKLADGAGGGAADGALDISPVPYFDMEVAGVYPLRYLGTAAYGGGNEGNWKQLSSDAEQRFIILGGK 1657
L +LL+A G + R + FGGKGGVGKT+TAAA A++ AD GLRTL+ISTDPAHSLGDAL Q + E + G+DNL A+EVD +AV E + AL +FD ++ ++G+ ++E +G+ + ++ NPPPGIDELVA+++VL+L R S +FDR++IDTAPTGHTLRLL P FLD FL KVI+L+ ++ + L M GGT E D A+++++ K+ ++ LR L +N + TEFC+VTIPT++AIAESKRLL +L +G+AV++++VN++++ S + +V +L Q + RL LA A L +S VPYFD+EV G LRY G A+G N W L D ++R II+GGK
Sbjct: 62 LNDLLQAPGGSTSTRLILFGGKGGVGKTTTAAATAVRFADEGLRTLIISTDPAHSLGDALGQQLHAPPDEMTAVEGVDNLWALEVDAGQAVIEMKAALETFDAIELSRKLGIGTTVLEGIGIGDMVKLFENPPPGIDELVAIAKVLQLTRGKGGGSSGGSRFDRLVIDTAPTGHTLRLLAAPQFLDGFLGKVIKLKNQLDALTRSLKKMLASVSGGTEGAEPLLDQDAALQRIEALKDRLLGLRGLLRNSETTEFCVVTIPTEMAIAESKRLLASLKKEGIAVKHLIVNKLMTAGSAEQVGEIQETRRVATLASFVEQLQSDQVKSLQRLHTLAQEAN-------LRLSFVPYFDVEVTGPLGLRYFGEEAFGRANAPMWSDLFEDPKRRCIIMGGK 451
BLAST of mRNA_E-siliculosus-1a_F_contig1223.1405.1 vs. uniprot
Match: A0A4D9DG36_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9DG36_9STRA) HSP 1 Score: 301 bits (771), Expect = 2.020e-89 Identity = 172/373 (46.11%), Postives = 244/373 (65.42%), Query Frame = 2
Query: 578 RNGVNERFVFFGGKGGVGKTSTAAAVAIQCADAGLRTLVISTDPAHSLGDALDQDVSGGEPVRIIGLDNLSAMEVDTVEAVKEFEEALSSFDISGMAEEMGVPKDMVESLGLSEFSEVLANPPPGIDELVALSRVLKLARSEEQK------FDRIIIDTAPTGHTLRLLGFPDFLDNFLEKVIQLRGRMGGILNLLTGMFGGGT----NVVEKADMAVEKLQGYKETMMELRDLFKNQDATEFCIVTIPTQLAIAESKRLLEALNTQGVAVRNIVVNQIVSPDSGPEYVARLHKGQSACIGRLQKLADGAGGGAADGALDISPVPYFDMEVAGVYPLRYLGTAAYG---GGNEGNWKQLSSDAEQRFIILGGK 1657
+ G+ +RF+FFGGKGGVGKTST+ A+A+ AD GL+TL+ISTDPAHSLGD L+Q VSGG+PVR+ G DNL AMEVDT A+ F D+S +A + GV + E+LA G+ ++V LS+ K + S+E FDR++IDTAPTGHTLRLL FPDFLD FL K+++L+ R+ +L+ L+ +FGGG+ + D + K++ K M+ELR+LF++QDATEFCIVTI TQLA+AESKRLL AL + +AVR++VVN++V + +++AR+ +GQ+ C+ R+++ G AD L VPY D+EV GV+ L+++ AA+ G G+ + RF++ GGK
Sbjct: 101 KTGLTQRFIFFGGKGGVGKTSTSTAIAVHLADKGLKTLIISTDPAHSLGDLLEQKVSGGDPVRVEGCDNLWAMEVDTTRALDRFRALFKELDVSALAAQFGVSE------------EILA----GLADVVRLSKG-KGSTSKEGAAVNGLTFDRVVIDTAPTGHTLRLLSFPDFLDGFLGKLVKLQLRLSKVLSSLSSLFGGGSVESQERLRATDELLAKVERAKLQMVELRELFRDQDATEFCIVTIATQLAVAESKRLLAALRKEKIAVRHLVVNKLVQDEDQSQHMARIGRGQALCLQRVER------GLVADHGLSTVQVPYLDVEVKGVFGLKFMADAAFETSPGSVFGDLFESGGPIATRFVLFGGK 450
BLAST of mRNA_E-siliculosus-1a_F_contig1223.1405.1 vs. uniprot
Match: R1FYY7_EMIHU (Uncharacterized protein n=2 Tax=Emiliania huxleyi TaxID=2903 RepID=R1FYY7_EMIHU) HSP 1 Score: 293 bits (749), Expect = 1.470e-87 Identity = 159/369 (43.09%), Postives = 237/369 (64.23%), Query Frame = 2
Query: 578 RNGVNERFVFFGGKGGVGKTSTAAAVAIQCADAGLRTLVISTDPAHSLGDALDQDVSGGEPVRIIGLDNLSAMEVDTVEAVKEFEEALSSFDISGMAEEMGVPKDMVESLGLSEFSEVLANPPPGIDELVALSRVLKLARSEEQK---------FDRIIIDTAPTGHTLRLLGFPDFLDNFLEKVIQLRGRMGGILNLLTGMFGGGTNVVEKADMAVEKLQGYKETMMELRDLFKNQDATEFCIVTIPTQLAIAESKRLLEALNTQGVAVRNIVVNQIVSPDSGPEYVARLHKGQSACIGRLQKLADGAGGGAADGALDISPVPYFDMEVAGVYPLRYLGTAAYGGGNEGNWKQLSSDAEQRFIILGGK 1657
++G +R + GGKGGVGKTS+++A+A++ AD GL TL++STDPAHSL DAL QDVSGG PV + G +NL AMEV+T +AV F A+S F + + G+ ++++ LGL EF+++L N PPG+DEL+AL+ L + R E F+R++ DTAPTGHTLRLL FP+FLD+ L KV+ L+ R+ + LL G+ GG + +K + AV +LQ +++ + LR+L ++D T+F +V IP++LA+AE RLL AL QGV V +++VNQ GR K DG+ + G L +S +P+FD+E+ GV+PL+Y+ + A+ G N W+ L +D + RF+++GGK
Sbjct: 3 QSGAAQRLILVGGKGGVGKTSSSSAIAVRLADTGLSTLIVSTDPAHSLSDALMQDVSGGSPVGVAGCENLQAMEVETADAVDRFRAAVSGFRAADLGLG-GLAEEVLGQLGLDEFADILDNVPPGLDELLALAETLAVVRGAEPDSDGAASLTGFERVVFDTAPTGHTLRLLAFPEFLDSLLGKVVALKARLLAAIGLLKGVLGG-NDPTDKIEAAVARLQRWRDRVASLRELLTDEDVTDFVVVGIPSRLAVAECARLLSALADQGVPVSHLIVNQ----------------------GRELKRLDGS---SPLGELALSRLPFFDLEMRGVFPLQYVASQAFRGTNADAWEDLLADQKDRFVLVGGK 344
BLAST of mRNA_E-siliculosus-1a_F_contig1223.1405.1 vs. uniprot
Match: A0A7S2B6R7_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2B6R7_9STRA) HSP 1 Score: 291 bits (744), Expect = 5.100e-86 Identity = 163/378 (43.12%), Postives = 238/378 (62.96%), Query Frame = 2
Query: 563 ELLEARNGVNERFVFFGGKGGVGKTSTAAAVAIQCADAGLRTLVISTDPAHSLGDALDQDVSGGE--PVRIIGLD-NLSAMEVDTVEAVKEFEEALSSFDISGMAEEMG--VPKDMVESLGLSEFSEVLANPPPGIDELVALSRVLKLARSEE----QKFDRIIIDTAPTGHTLRLLGFPDFLDNFLEKVIQLRGRMGGILNLLTGMFGGGTNVVE-KADMAVEKLQGYKETMMELRDLFKNQDATEFCIVTIPTQLAIAESKRLLEALNTQGVAVRNIVVNQIVSPDSGPEYVARLHKGQSACIGRLQKLADGAGGGAADGALDISPVPYFDMEVAGVYPLRYLGTAAYGGGNEGN-WKQLS--SDAEQRFIILGGK 1657
ELL G RFVF GGKGGVGKTS ++A+A+ ADAGLRTLV+S DPAHSLGD L D+ G V I G D NL AME+D ++KEF +A++ FD++ +A+E+G D +LGL EF+ +L NPPPG+DELVAL+ V++LAR + Q FDR+IIDTAPTGH LRLL P+FL++FL+K++ R ++ +L L T M G + K D AV Y+ + LRDL + AT+F +V PT LA+AE++RL+ +L GV R+++VN+++ ++ ++ +L KGQ++ + R+ +D++ VP+FD E+ G Y LRY+ A+ +G+ W L+ +QR +++GGK
Sbjct: 52 ELLSPPAGEGLRFVFVGGKGGVGKTSCSSAIAVTLADAGLRTLVVSVDPAHSLGDVLATDLPRGSNNAVPIFGCDDNLYAMEIDAEASLKEFTDAIAGFDLAAVAKEIGGQAGADFASNLGLDEFAGILRNPPPGVDELVALNAVVRLARGTDASGMQSFDRVIIDTAPTGHALRLLSAPEFLEDFLDKLLSFRSKLDSVLGLATTMLGLNAGALTAKLDAAVIAADNYRTQIKSLRDLLTDPTATQFVVVAGPTALAVAETERLVSSLEDSGVTTRSLIVNKVLGANTNEKFTDQLKKGQTSAMERVDSRLSKK--------VDVTSVPFFDTELVGTYALRYMAQNAFEPTAQGSSWDTLAHGDSGDQRLVLVGGK 421
BLAST of mRNA_E-siliculosus-1a_F_contig1223.1405.1 vs. uniprot
Match: A0A8J6C886_DIALT (Uncharacterized protein n=4 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J6C886_DIALT) HSP 1 Score: 287 bits (734), Expect = 1.220e-83 Identity = 177/454 (38.99%), Postives = 253/454 (55.73%), Query Frame = 2
Query: 557 LGELLEARNGVNERFVFFGGKGGVGKTSTAAAVAIQCADAGLRTLVISTDPAHSLGDALDQDVSGGEPVRIIGLDNLSAMEVDTVEAVKEFEEALSSF-----DISGMAEEMGVPKDMVESLGLSEFSEVLANPPPGIDELVALSRVLKLARS------------------EEQKFD------------------------------------RIIIDTAPTGHTLRLLGFPDFLDNFLEKVIQLRGRMGGILNLLTGMFGGGTNVVEKADMAVEKLQGYKETMMELRDLFKNQDATEFCIVTIPTQLAIAESKRLLEALNTQGVAVRNIVVNQIVSPDSGPEYVARLHKGQSACIGRLQKLA---DGAGGGAADGALD-------ISPVPYFDMEVAGVYPLRYLGTAAYGGGNEGNWKQLSSD------------------AEQRFIILGGK 1657
L ++L+ +G +RFV GGKGGVGKTSTA+A+AI+CA +GLRTLV STDPAHSLGDAL D++GG+PV + GLD L A+E+D EA+ F AL++F + G+AEE+ + LGL EF+++L PPPG+DEL+AL+ V++L R E FD R+I+DTAPTGHTLRLL P F+D+ L K++ LR R+GG+L+ + G+ + + A +++ + + LR L + D EFC+VT+PT++A+AE+ RL+ L Q V+VR++VVNQ+V S P Y++RL KGQ + RL A + A GGA GA +SPV Y+D+E+ GVYPLR+L A+ G W +++ AE RF+++GGK
Sbjct: 57 LADVLDT-SGAAQRFVLVGGKGGVGKTSTASALAIRCAQSGLRTLVASTDPAHSLGDALQLDLAGGKPVAVPGLDGLDALEIDPSEAIGRFRAALAAFRPADLGLGGLAEEL------LSQLGLDEFADILDEPPPGLDELLALAEVIELTRGGPATGRGEAHASAAAAQDELDDFDARLAARSGXXXXXXXXXXXXXXXXXXXXXXXSISYARVILDTAPTGHTLRLLSLPQFIDSLLGKLVALRARLGGVLSAAAALGLVGSGIDARLSEATARVEDVRMRVQALRALLVDADRAEFCVVTVPTEVAMAETARLVGTLREQRVSVRHLVVNQLVEQTSAPAYLSRLRKGQDSIARRLLGRASATEAAAGGAQPGAAGSEWAGVCVSPVRYYDVELRGVYPLRFLADKAFSGAE---WAPITAADAGAADAAGAGAGGLAPRAECRFVVMGGK 500
BLAST of mRNA_E-siliculosus-1a_F_contig1223.1405.1 vs. uniprot
Match: A0A7S3E7S7_9RHOD (Hypothetical protein n=2 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3E7S7_9RHOD) HSP 1 Score: 276 bits (706), Expect = 3.990e-83 Identity = 162/378 (42.86%), Postives = 233/378 (61.64%), Query Frame = 2
Query: 548 ARGLGELLEARNGVNERFVFFGGKGGVGKTSTAAAVAIQCADAGLRTLVISTDPAHSLGDALDQDVSGGEPVRIIGLDNLSAMEVDTVEAVKEFEEALSSF-DISGMAEEMGVPKDMVESLGLSEFSEVLANPPPGIDELVALSRVLKLARSEEQKFDRIIIDTAPTGHTLRLLGFPDFLDNFLEKVIQLRGRMGGI---LNLLTGMFGGGTNVVEKA-DMAVEKLQGYKETMMELRDLFKNQDATEFCIVTIPTQLAIAESKRLLEALNTQGVAVRNIVVNQIVSPDSGPEYVARLHKGQSACIGRLQKLADGAGGGAADGALDISPVPYFDMEVAGVYPLRYLGTAAYGGGN-EGNWKQL--SSDAEQRFIILGGK 1657
+ G LLE+++ +RFVF GKGGVGKT++++A+A++ A GL+TLV+STDPAHSLGD LD D+S GE + I DNLSA+EVDT EAV+EF+ +SS ++S K++ LGL EF EVL PPG DE VAL +VL+LA +Q ++R++IDTAPTGHTLRLL FPDFLDNFL K +R + LN L+ + G TN+ +A + A K+ Y+E M EL D+ + TEF +V IPT+L++ E++RL+ +L +G+ VRN+V+NQ+++ Y+ + +GQ+ + +++ L ++ V FDMEV G+Y LR AA E W S + +F +GGK
Sbjct: 56 SNGFNRLLESKD---QRFVFVSGKGGVGKTTSSSAMAVRFAAEGLKTLVLSTDPAHSLGDCLDVDLSSGEIIPIT--DNLSALEVDTAEAVEEFKRTISSLNELSEEDRAKSGAKELANRLGLGEFGEVLTTLPPGADEFVALVKVLRLAEEADQGYERVVIDTAPTGHTLRLLAFPDFLDNFLGKASAMRSSIDTARMALNSLSSVIGANTNISSEAQEKAAVKVSEYRERMQELSDIIHDPSRTEFIVVAIPTRLSVEETRRLVSSLFEEGIWVRNMVINQLITESVSETYMEHIVQGQTESLHHIERSFPD---------LFVTKVSRFDMEVRGIYGLRSFAKAACPDSEKEERWPGWFDPSGPDNKFCFVGGK 419
BLAST of mRNA_E-siliculosus-1a_F_contig1223.1405.1 vs. uniprot
Match: A0A7S3Z2P8_9EUKA (Hypothetical protein n=2 Tax=Lotharella globosa TaxID=91324 RepID=A0A7S3Z2P8_9EUKA) HSP 1 Score: 286 bits (732), Expect = 6.700e-83 Identity = 163/381 (42.78%), Postives = 235/381 (61.68%), Query Frame = 2
Query: 548 ARGLGELLEARNGVNE----RFVFFGGKGGVGKTSTAAAVAIQCADAGLRTLVISTDPAHSLGDALDQDVSGGEPV---RIIGLDNLSAMEVDTVEAVKEFEEALSSFDISGMAEEMGVPKDMVESLG----LSEFSEVLANPPPGIDELVALSRVLKLARSEEQK--------FDRIIIDTAPTGHTLRLLGFPDFLDNFLEKVIQLRGRMGGILNLLTGMFGGGTNVVEKADMAVEKLQGYKETMMELRDLFKNQDATEFCIVTIPTQLAIAESKRLLEALNTQGVAVRNIVVNQIVSPDSGPEYVARLHKGQSACIGRLQKLADGAGGGAADGALDISPVPYFDMEVAGVYPLRYLGTAAYGGGNEGNWKQLSSDAEQ 1633
A+GL EL G + R++F GGKGGVGKT+TA+A+ ++ A+ G TLV+STDPAHSLGDALD+D+SGG V ++GL L AMEVD+ + + F EA+S D+ G+A E G+ + +E+ L + S + NPPPGIDE+VA+++VLKL +S + RI+ DTAPTGHTLRLL P FLD+F+ K I+LR R+G +L L+ G K + V KL+ ++ M +L+ L N ATEF +VTIPT +A+ ES+RLL++L+ +A ++IVVN+I+SP Y+ + + Q C+ RLQ L ++I+ VPYFD EV G+ L ++GT A+ GN NW+ ++ Q
Sbjct: 120 AQGLSELFVDDRGSSSAGKSRYIFCGGKGGVGKTTTASAIGVKLAEQGHTTLVVSTDPAHSLGDALDEDLSGGGIVDVGSVMGLP-LYAMEVDSKQTLDRFSEAVSGLDLVGLAVEAGISVETLETFQVKDLLKDLSSLFENPPPGIDEIVAIAQVLKLVKSSSVENVAKGHGPITRIVFDTAPTGHTLRLLNLPTFLDSFIAKAIKLRARVGNVLTSLSQFLGMENTFESKLNKVVSKLEDFQNDMQQLKSLLTNPKATEFVVVTIPTTMAVRESRRLLDSLDEADIATKHIVVNRILSPQLDVSYLNSIQEAQQECLERLQNLESKG--------IEITKVPYFDREVYGIDGLAHMGTVAFSQGNS-NWEDITQGLPQ 490
BLAST of mRNA_E-siliculosus-1a_F_contig1223.1405.1 vs. uniprot
Match: A0A7S2ZDM4_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S2ZDM4_9RHOD) HSP 1 Score: 273 bits (698), Expect = 1.250e-82 Identity = 150/336 (44.64%), Postives = 225/336 (66.96%), Query Frame = 2
Query: 581 NGVNERFVFFGGKGGVGKTSTAAAVAIQCADAGLRTLVISTDPAHSLGDALDQDVSGGEPVRIIGLD-NLSAMEVDTVEAVKEFEEALSSFDISGMAEEMGVPKDMVESLGLSEFSEVLANPPPGIDELVALSRVLKLARSEEQKFDRIIIDTAPTGHTLRLLGFPDFLDNFLEKVIQLRGRMGGILNLLTGMFGGGTNVVEKADMAVEKLQGYKETMMELRDLFKNQDATEFCIVTIPTQLAIAESKRLLEALNTQGVAVRNIVVNQIVSPDSGPEYVARLHKGQSACIGRLQKLADGAGGGAADGALDISPVPYFDMEVAGVYPLRYLGTAAYG 1585
+G + +F F GGKGGVGKTST+AA+ ++ AD+GL+TL+ISTDPAHSL DALD +SG +PV + G + NL AMEVDT A+ EF + L + G G+ D+ GL+EFS++LAN PPGIDELVAL++V+ L +S + F R+I+DTAPTGHTLRLL FPDF+D FL ++++L+ R+ ++ + +F G + V +A ++++ +++ M EL++LF + + T+FC+VTIPT+LA+AES+RL+ +L + + V N++VNQI+ + Y+ R K QS + L+ ++ + + I+ V YFD EV GV LR L +G
Sbjct: 103 SGPDNKFCFVGGKGGVGKTSTSAALGVESADSGLKTLIISTDPAHSLSDALDIQLSG-DPVVVDGTEGNLFAMEVDTKRAIGEFRDLLQQYVNEGT----GIGADLARRFGLAEFSDILANTPPGIDELVALTQVVSLVKSGQ--FKRVIVDTAPTGHTLRLLAFPDFIDQFLGQILRLKRRIDDLVASVKNVFTGASTEVGRA---ADRVETFRKNMTELKELFADSERTQFCVVTIPTELAVAESERLVASLKSSKITVNNLIVNQILPEHATEAYLNRRVKEQSKSVDELESISS------EEFPISIAKVNYFDEEVRGVERLRNLSDKIFG 422 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1223.1405.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig1223.1405.1 >prot_E-siliculosus-1a_F_contig1223.1405.1 ID=prot_E-siliculosus-1a_F_contig1223.1405.1|Name=mRNA_E-siliculosus-1a_F_contig1223.1405.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=496bp MPHPPALRMCQSLPTALLSLAYLTASSTTAFVLGPLRASRVTSANNRRALback to top mRNA from alignment at E-siliculosus-1a_F_contig1223:4233..11026- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_F_contig1223.1405.1 ID=mRNA_E-siliculosus-1a_F_contig1223.1405.1|Name=mRNA_E-siliculosus-1a_F_contig1223.1405.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=6794bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1223:4233..11026- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig1223:4233..11026- >mRNA_E-siliculosus-1a_F_contig1223.1405.1 ID=mRNA_E-siliculosus-1a_F_contig1223.1405.1|Name=mRNA_E-siliculosus-1a_F_contig1223.1405.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=2976bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1223:4233..11026- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top |