mRNA_E-siliculosus-1a_F_contig1013.139.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female
You are viewing an mRNA, more information available on the corresponding polypeptide page
|
Overview
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1013.139.1 vs. uniprot
Match: D8LEF3_ECTSI (Putative hUPF2 n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LEF3_ECTSI) HSP 1 Score: 824 bits (2128), Expect = 1.340e-276 Identity = 723/785 (92.10%), Postives = 724/785 (92.23%), Query Frame = 1 Query: 214 MSSSGGGEGRSRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXS-RSNRTSKPASSTPSTTEATXXXXXXXXXXXXXXXXXXXXXXXX-GKRDDGLVPGSGLLALQALAPAQKKSKADPKTPTAAPVPQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRDTGGKTAATTATQQERSGKALGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRKPSGKGTGARQLSEEEERXXXXXXXXXXXXXXXXXXXXXEERXXKAXXXXKAAEEQCARREXXXXXXXXXXXXXXXXXXXXXXXXXEVKRKXXXXXXXXXXXXXXXXXXXXXXXXXAERKAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFEAQLEAVSQLDLLQKEERARRELREKHTPEALKASRDAHEANKPKLKSDLKKTTAFTKKVKALSEDQRSALTKDVETLNLNRYVSEVVDAVAENRLKNADVSVAVHLCCLMHQRYAEFAEDLIPKLAAPFLSAPSGEEEREEKELLRRKRSNLRLLTELHASGVFDGSRLIVRIVRSLCGLEGKDGKRQRPGPGDAARRRDHQTVTAAPPPLRETDVTLLAGFVRAAGEDMVGVLQRKTVGMLKLAGEMGKLEREPVVDADVKGRLRSLVDGVFDSLCSHLERGHEQLGRLEKKMEKDRLTNGTLTEEKERNLEESRKGYEALLGNVTSLASSLNRDMPQLPEHEAEEEGSGGISLWEGGVGGDGTGYTGPFEESER 2562
MSSSGGGEGRSRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX RSNRTSKPASSTPSTTEATXXXXXXXXXXXXXXXXXXXXX GKRDDGLVPGSGLLALQALAPAQKKSKADPKTPTAA VPQXXXXXXX XXXXXXXXX RDTGGKTAATTATQQERSGKALG XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRKPSGKGTGARQLSEEEE X XX XXXX AAEEQ ARRE XXXXXXXXXXXXXXXXXXXXXXXEVKRK XXXXXXXXXXXXXXXXXXXXXXXAERKAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFEAQLEAVSQLDLLQKEERARRELREKHTPEALKASRDAHEANKPKLKSDLKKTTAFTKKVKALSEDQRSALTKDVETLNLNRYVSEVVDAVAENRLKNADVSVAVHLCCLMHQRYAEFAEDLIPKLAAPFLSAP GEEEREEKELLRRKRSNLRLLTELHASGVFDGSRLIVRIVRSLCGLEGKDGKRQRPGPGDAARR DHQTVTAAPPPLRE DVTLLAGFVRAAGEDMVGVLQRKT GMLKLAGEMGKLEREPVVDADVKGRLRSLVDGVFD+LCSHLERGHEQLGRLEKKMEKDRLTNGTLTEEKERNLEESRKGYEALLGNVTSLASSLNRDMPQLPEHEAEEEGSGGISLWEGGVGGDGTGYTGPFEESER
Sbjct: 1 MSSSGGGEGRSRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRSNRTSKPASSTPSTTEATXXXXXXXXXXXXXXXXXXXXXATAAGKRDDGLVPGSGLLALQALAPAQKKSKADPKTPTAAAVPQXXXXXXXKGRAGGSASXXXXXXXXXRGAKGAGGRDTGGKTAATTATQQERSGKALGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRKPSGKGTGARQLSEEEEGERSREAAKQLAAQKEARKRAXXXXXXXXXXXXXAAEEQRARREAEXXXXXXXXXXXXXXXXXXXXXXXEVKRKAEXXXXXXXXXXXXXXXXXXXXXXXAERKAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFEAQLEAVSQLDLLQKEERARRELREKHTPEALKASRDAHEANKPKLKSDLKKTTAFTKKVKALSEDQRSALTKDVETLNLNRYVSEVVDAVAENRLKNADVSVAVHLCCLMHQRYAEFAEDLIPKLAAPFLSAPGGEEEREEKELLRRKRSNLRLLTELHASGVFDGSRLIVRIVRSLCGLEGKDGKRQRPGPGDAARRPDHQTVTAAPPPLREADVTLLAGFVRAAGEDMVGVLQRKTAGMLKLAGEMGKLEREPVVDADVKGRLRSLVDGVFDALCSHLERGHEQLGRLEKKMEKDRLTNGTLTEEKERNLEESRKGYEALLGNVTSLASSLNRDMPQLPEHEAEEEGSGGISLWEGGVGGDGTGYTGPFEESER 785
BLAST of mRNA_E-siliculosus-1a_F_contig1013.139.1 vs. uniprot
Match: A0A835YRH9_9STRA (Armadillo-type protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YRH9_9STRA) HSP 1 Score: 311 bits (796), Expect = 6.480e-87 Identity = 182/363 (50.14%), Postives = 241/363 (66.39%), Query Frame = 1 Query: 1471 QKEERARRELREKHTPEALKASRDAHEANKPKLKSDLKKTTAFTKKVKALSEDQRSALTKDVETLNLNRYVSEVVDAVAENRLKNADVSVAVHLCCLMHQRYAEFAEDLIPKLAAPFLSAPSGEEEREEKELLRRKRSNLRLLTELHASGVFDGSRLIVRIVRSLCGLEGKDGKRQRPGPGDAARRRDHQTVTAAPPPLRETDVTLLAGFVRAAGEDMVGVLQRKTVGMLKLAGEMGKLEREPVVDADVKGRLRSLVDGVFDSLCSHLERGHEQLGRLEKKMEKDRLTNGTLTEEKERNLEESRKGYEALLGNVTSLASSLNRDMPQLPEHEAEEEGSGGISLWEGGVGGDGTGYTGPFEESE 2559
Q+++ RR LR ++TP A+ ASR +H ANK KLKSDLKKT+ FT KV+ L+E QR+ +TKD+ETLNL+ YVSE+VDAVAE +LK +DVSVAVHLCC+MHQRYA F EDLIPKL APF P+ ++K+ LR++RSNLRLLTELH GVFDGS+ ++ ++R L G R H TV AAP LR DV+L+ F + AG+++ G++ R++ G L + + ER VV A+ + ++ GV L HL H+ L +LE++MEKDRL G+LTEEKERNLE S Y LL NV +L+ +L+ DMP LPE + EEE GG+ LW GVG G G GP+++ E
Sbjct: 8 QRKDEERRALRARNTPGAVAASRASHNANKSKLKSDLKKTSTFTSKVRTLTEAQRATITKDIETLNLSHYVSEIVDAVAEAKLKTSDVSVAVHLCCMMHQRYAGFTEDLIPKLLAPFREDPA----EDDKDALRKRRSNLRLLTELHLCGVFDGSQWLLNVLRRLAGERRXXXXXXXXXXXXXXHRSAHATVEAAPADLRPNDVSLVVAFAKHAGQELAGIVPRRS-GRLAVF-QRSSQERLRVVSAEGQALFLGVLQGVLRRLRGHLVTAHKALQKLERRMEKDRLLCGSLTEEKERNLELSAGAYNKLLSNVVALSDALDEDMPDLPEDKEEEE-LGGVELWSSGVG-LGEGDLGPWDDLE 362
BLAST of mRNA_E-siliculosus-1a_F_contig1013.139.1 vs. uniprot
Match: A0A7S2WVG7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WVG7_9STRA) HSP 1 Score: 184 bits (467), Expect = 4.270e-47 Identity = 148/407 (36.36%), Postives = 206/407 (50.61%), Query Frame = 1 Query: 1489 RRELREKHTPEALKASRDAHEANKPKLKSDLKKTTAFTKKVKA-LSEDQRSALTKDVETLNLNRYVSEVVDAV----AENRLKNADVSVAVHLCCLMHQRYAEFAEDLIPKLA----------------APFLSAPSGEEEREEKELLRRKRSNLRLLTELHASGVFDGSRLIVRIVRSLCGLEGKDGKRQRPGPGDAARRRDHQTVTAAPPPLRETDVTLLAGFVRAAGEDMVGVLQR---KTVGMLKLAGEMGKL-----EREPVVDA---------------DVKGRLRSLVDGVFDSLCSHLERGHEQLGRLEKKMEKDRLTNGTLTEEKERNLEESRKGYEALLGNVTSLASSLNRDMPQ--LPEHEAEEEGSG----GISLWEGGVGGDGTGYTGPFEESE 2559
R+ LRE PEAL+A R H ANK KLKSDL+K TAFTKKVKA + E + L KD+ETLNL+ Y+SE+V A+ A RLK +D+ V +C +H RY FAE L P L + L PSG E+ +KEL +RKR LR L EL G+F +++VR +R R G A +RD + A+ P + D +LL F + E +VG +R G+ + AG L PV A +++G LRS++ +++ L G L ++ ++ KD L +G+L+EEK LE ++K E L NV +LA +L++D P P E E+E +G GISLW GG G D + GPF + E
Sbjct: 35 RQRLREASLPEALEAFRAQHAANKSKLKSDLRKATAFTKKVKAGVVERDVTGLLKDIETLNLSMYISEIVAAIVSPEALQRLKTSDIHSVVRICVALHLRYPSFAEGLFPGLVPVATDDSVYSASGGHGSAVLILPSGGEDYSDKELAKRKRIALRFLAELFLCGIFRDGQILVRALR-------------RAYRGTAGLKRDANS--ASEPSSSQIDQSLLVSFAKMGSEALVGTPRRIKDAEAGLSRQAGPNAALGATAASAAPVHGAXXXXXGGSHSGWDPSEIRGILRSVLGMAHETMARALRDGQRDLAKMMRRFAKDELNHGSLSEEKTARLENAKKSVEKLHSNVAALADALDQDPPAEFQPPDEDEDEEAGMEGEGISLWTGGEGKDSAEF-GPFGDDE 425
BLAST of mRNA_E-siliculosus-1a_F_contig1013.139.1 vs. uniprot
Match: A0A8K1CPI5_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CPI5_PYTOL) HSP 1 Score: 170 bits (431), Expect = 9.620e-40 Identity = 119/360 (33.06%), Postives = 199/360 (55.28%), Query Frame = 1 Query: 1453 SQLDLLQKEERARRELREKHTPEALKASRDAHEANKPKLKSDLKKTTAFTKKVKALSEDQRSALTKDVETLNLNRYVSEVVDAVAENRLKNADVSVAVHLCCLMHQRYAEFAEDLIPKLAAPFLSAPSGEEEREEKELLRRKRSNLRLLTELHASGVFDGSRLIVRIVRSLCGLEGKDGKRQRPGPGDAARRRDHQTVTAAPPPLRETDVTLLAGFVRAAGEDMVGVLQRKTVGMLKLAG-EMGKLER--EPVVDADVKGRLRSLVDGVFDSLCSHLERGHEQLGRLEKKMEKDRLTNGTLTEEKERNLEESRKGYEALLGNVTSLASSLNRDMPQLPEHEAEEEGSG-GISLWEGGVGG 2520
+Q++ L K+ + R LR ++ EA++ R KLKSD+KK++AF KK++ L+E L KD + LNL RYV+E V ++AE LK AD+ AV + L+HQRYAEF+ L+ L F G E+K L ++R LRLL+EL+ +GVF ++I IV+ + EG GP ++ + + ++ + + +V LL F ++ G + +GVL +K + G E + R + +V V+ + + +D +C + H L +L K+ +++ + G ++E+ + LE ++ +E L +V +LA +L++D+P LP + ++E G GISLWEGG GG
Sbjct: 12 AQMEELHKQTQMRMALRRSNSVEAVEQLRADIATGVVKLKSDIKKSSAFGKKLRMLTEHNADVLAKDTKELNLTRYVTECVASIAEAPLKMADLPAAVRVISLLHQRYAEFSTLLVDALTTAF----DGSYGTEDKHKLVKRRILLRLLSELYLAGVFHDVQVIATIVQRVVRREG--------GPAGKSKSKGNMSLAGSSSSSAQLEVPLLVSFAKSVGAEFLGVLPKKYKEITAAFGDEFAPVVRFQQGLVPQSVQNQCLACFQEAYDLICKYYLTQHGALVKLRKRNDREEINRGEISEQHVQELENAKLLFEKLQTSVNALADALDKDVPALPVEKTDDELLGSGISLWEGGEGG 359
BLAST of mRNA_E-siliculosus-1a_F_contig1013.139.1 vs. uniprot
Match: W2QQV7_PHYPN (Uncharacterized protein n=13 Tax=Phytophthora TaxID=4783 RepID=W2QQV7_PHYPN) HSP 1 Score: 169 bits (427), Expect = 2.920e-39 Identity = 127/384 (33.07%), Postives = 210/384 (54.69%), Query Frame = 1 Query: 1432 EAQLEAVSQLDLLQKEERARRELREKHTPEALKASRDAHEANKPKLKSDLKKTTAFTKKVKALSEDQRSALTKDVETLNLNRYVSEVVDAVAENRLKNADVSVAVHLCCLMHQRYAEFAEDLIPKLAAPFLSAPSGEEEREEKELLRRKRSNLRLLTELHASGVFDGSRLIVRIVRSLCGLEGKDGKRQRPGPGDAARRRDHQTVTAAPPPLRETDVTLLAGFVRAAGEDMVGVLQRKTVGMLKLAGEMGKLER-----EPVVDADVKGRLRSLVDGVFDSLCSHLERGHEQLGRLEKKMEKDRLTNGTLTEEKERNLEESRKGYEALLGNVTSLASSLNRDMPQLPEHEAEE-EGSGGISLWEGGVGGDGTGYT----GPFEE 2553
+AQ +A+SQL LQ++ AR LR ++ A + + KLKSD+K+++AF KK++ LSE +L +D LNL RYVSE V A+A+ LK AD+ AV + L+HQRY +FA ++ L + F ++ + E+ K + ++R LRLL EL+ +GVFD ++I I++ + KR++PG A + R + + + + ++ +V LL F ++ G D +GV +K + K+ + E+ PVV +V+ S ++ +C H +L+ + EK+ G +TEE + L+ ++ +E L +V SLA +L+RD+P LP E ++ G+G I +WEGG DG G GPF++
Sbjct: 9 DAQAQALSQLHELQRQSEARSALRSANS--AANVADVRAKLATLKLKSDIKRSSAFVKKLRVLSEANADSLLRDAAELNLTRYVSECVAALADAPLKAADLPAAVKVASLLHQRYEDFAPGMVRALVSSFEASYASED----KSKMLKRRLILRLLCELYLAGVFDDVQVIAHIIQRVA-------KREQPG---AKKGRGNMSTSGSNTGSQQLEVPLLVSFAKSVGVDFLGVQPKKFKELEKILEGNEEFEKFLESQTPVVLQNVQQECLSCYLEAYEMICKFYLAQHATFLKLDARNEKEEANRGEVTEEHVQELKNAKLLFEKLQTSVNSLADALDRDVPPLPVEEKDDGSGNGSILVWEGG---DGAGRELSRDGPFDD 373
BLAST of mRNA_E-siliculosus-1a_F_contig1013.139.1 vs. uniprot
Match: A0A662XN79_9STRA (Uncharacterized protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XN79_9STRA) HSP 1 Score: 168 bits (426), Expect = 4.620e-39 Identity = 129/377 (34.22%), Postives = 208/377 (55.17%), Query Frame = 1 Query: 1447 AVSQLDLLQKEERARRELREKHTPEALKASRDAHEANKPKLKSDLKKTTAFTKKVKALSEDQRSALTKDVETLNLNRYVSEVVDAVAENRLKNADVSVAVHLCCLMHQRYAEFAEDLIPKLAAPFLSAPSGEEEREEKELLRRKRSNLRLLTELHASGVFDGSRLIVRIVRSLCGLE-GKDGKRQRPGPGDAARRRDHQTVTAAPPPLRETDVTLLAGFVRAAGEDMVGVLQRKTVGMLK-LAGE---MGKLEREP--VVDADVKGRLRSLVDGVFDSLCSHLERGHEQLGRLEKKMEKDRLTNGTLTEEKERNLEESRKGYEALLGNVTSLASSLNRDMPQLPEHEAEE-EGSGGISLWEGGVGGDGTGYTGPFEE 2553
A++Q+ LQ++ AR ELR +++PE + A R KLKSD+KK++AF KK+K LSE ++ KDVE LNL RYVSE V A+AE LK AD+ AV L+HQRY +FA ++ L F S+ E+ K + ++R LR+L+EL+ +GVFD +++ ++++ + E G +QR G G+ + + ++ +V LL F ++ G + +GV +K + K L G ++ +P V A + L S ++ ++ +C H +LE + EK+ + G +TEE + L+ + +E L +V SLA +L+R++P LP E ++ G GGI +WEG GG GPF++
Sbjct: 356 ALAQVADLQRQLDARLELRAQNSPERVAALRAQISGGALKLKSDIKKSSAFVKKLKLLSESNAESVLKDVEELNLTRYVSECVAALAEAPLKLADLPAAVRAASLLHQRYEDFASGMVRTLVGVFESSYGSED----KSKMVKRRLILRMLSELYLAGVFDDVQVVAQLIQRVARREQGSSASKQR-GKGNMS--------LGSSAASQQLEVPLLVTFAKSVGVEFLGVQPKKFKELAKQLRGNDAFQTLVDNQPTLVPKAVQQECLASFLEA-YEMICKFYLAQHAAFLKLEARNEKEEVNRGEVTEEHVQELKNGKLLFEKLQTSVNSLADALDREVPPLPVEEKDDGSGRGGILVWEGEGGGRELSRDGPFDD 718
BLAST of mRNA_E-siliculosus-1a_F_contig1013.139.1 vs. uniprot
Match: A0A662Y2U6_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662Y2U6_9STRA) HSP 1 Score: 167 bits (423), Expect = 1.050e-38 Identity = 132/377 (35.01%), Postives = 209/377 (55.44%), Query Frame = 1 Query: 1447 AVSQLDLLQKEERARRELREKHTPEALKASRDAHEANKPKLKSDLKKTTAFTKKVKALSEDQRSALTKDVETLNLNRYVSEVVDAVAENRLKNADVSVAVHLCCLMHQRYAEFAEDLIPKLAAPFLSAPSGEEEREEKELLRRKRSNLRLLTELHASGVFDGSRLIVRIVRSLCGLE-GKDGKRQRPGPGDAARRRDHQTVTAAPPPLRETDVTLLAGFVRAAGEDMVGVLQRKTVGMLK-LAGE---MGKLEREP--VVDADVKGRLRSLVDGVFDSLCSHLERGHEQLGRLEKKMEKDRLTNGTLTEEKERNLEESRKGYEALLGNVTSLASSLNRDMPQLPEHEAEE-EGSGGISLWEGGVGGDGTGYTGPFEE 2553
A++Q+ LQ++ AR ELR +++PE + A R KLKSD+KK++AF KK+K LSE ++ KDVE LNL RYVSE V A+AE LK AD+ AV L+HQRY +FA ++ LA F S+ G E+R + + ++R LR+L+EL+ +GVFD +++ ++++ + E G +QR G G+ + + ++ +V LL F ++AG + +GV +K + K L G ++ +P V A + L S +D ++ +C H +LE + EK+ G + EE L+ + +E L +V SLA +L+R++P LP E ++ G GGI +WEG GG GPF++
Sbjct: 222 ALAQVADLQRQLDARLELRAQNSPERVAALRAQIAGGALKLKSDIKKSSAFVKKLKLLSESNAESVLKDVEELNLTRYVSECVAALAEAPLKLADLPAAVRAASLLHQRYEDFASGMVRTLAGVFESS-YGSEDRNK---MVKRRLILRMLSELYLAGVFDDVQVVAQLIQRVARREQGSSASKQR-GKGNMS--------LGSSAASQQLEVPLLVTFAKSAGVEFLGVQPKKFKELAKQLRGNDAFQTLVDNQPTLVPKAVQQECLASFLDA-YEMICKFYLAQHAAFLKLEARNEKEEANRGEVMEEHVLELKNGKLLFEKLQTSVNSLADALDREVPPLPVEEKDDGSGRGGILVWEGEGGGRELSRDGPFDD 584
BLAST of mRNA_E-siliculosus-1a_F_contig1013.139.1 vs. uniprot
Match: A0A2D4BZX6_PYTIN (Uncharacterized protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BZX6_PYTIN) HSP 1 Score: 164 bits (415), Expect = 9.130e-38 Identity = 127/368 (34.51%), Postives = 204/368 (55.43%), Query Frame = 1 Query: 1489 RRELREKHTPEALKASRDAHEANKPKLKSDLKKTTAFTKKVKALSEDQRSALTKDVETLNLNRYVSEVVDAVAENRLKNADVSVAVHLCCLMHQRYAEFAEDLIPKLAAPFLSAPSGEEEREEKELLRRKRSNLRLLTELHASGVFDGSRLIVRI-VRSLCGLEGKDGKRQRPGPGDAARRRDHQTVTAAPPPLRETDVTLLAGFVRAAGEDMVGVLQRKTVGMLKLAGE----MGKLEREPVVDADVKGRLRSLVDGVFDSLCSHLERGHEQLGRLEKKMEKDRLTNGTLTEEKERNLEESRKGYEALLGNVTSLASSLNRDMPQLPEHEAEEEGSG-GISLWEGGVGGDGTGYT-----GPFEESE 2559
RRELRE++ EA ++ R + + KLKSD+KK++AF KK+K LSE A+ KDV LNL RY+SE V ++ + LK D+ V + ++HQRY+EF L+ L A F ++ E+ K L ++R LRLL+EL+ GVFD + I I VR++ GK R G +A+ + ++P + +V LL F +A G + +GVL R+ M GE + +E+E V A V+ S + F+ + + H L +L K+ +++ + G + E+ + LE+S+ +E L +V SLA +L+++ P LP + ++E +G GISLW+GG DG+G + PF++ +
Sbjct: 25 RRELREQNGREAAESLRATIASGRVKLKSDIKKSSAFVKKLKLLSEHNADAIMKDVTELNLTRYLSECVSSLVDAPLKMVDLPATVKIVSMLHQRYSEFGATLVQALLAAFDTSYGTED----KNKLVKRRILLRLLSELYLVGVFDDVQPIASIIVRAVRRENASSGKLAR---GASAKGNMSISNASSPSGSSQLEVPLLVSFAKAVGVEFLGVLPRRYKEMESAYGEEFTSLVSVEQERVPRA-VQESCLSCFNDAFELVSKYYLGQHATLVKLRKRNDREEVNRGEVAEQHVQELEKSKMLFEKLQTSVNSLAEALDKEAPPLPIEKQDDEFTGTGISLWDGG---DGSGRSDQLANSPFDDED 381
BLAST of mRNA_E-siliculosus-1a_F_contig1013.139.1 vs. uniprot
Match: C3YPG4_BRAFL (Uncharacterized protein (Fragment) n=2 Tax=Branchiostoma floridae TaxID=7739 RepID=C3YPG4_BRAFL) HSP 1 Score: 164 bits (414), Expect = 9.910e-38 Identity = 108/324 (33.33%), Postives = 173/324 (53.40%), Query Frame = 1 Query: 1564 KLKSDLKKTTAFTKKVKALSEDQRSALTKDVETLNLNRYVSEVVDAVAENRLKNADVSVAVHLCCLMHQRYAEFAEDLIPKLAAPFLSAPSGEEEREEKELLRRKRSNLRLLTELHASGVF---DGSRLIVRIVRSLCGLEGKDGKRQRPGPGDAARRRDHQTVTAAPPPLRETDVTLLAGFVRAAGEDMVGVLQRKTVGMLKLAGEMGKLEREPVVDADVKGRLRSLVDGVFDSLCSHLERGHEQLGRLEKKMEKDRLTNGTLTEEKERNLEESRKGYEALLGNVTSLASSLNRDMPQLPEHEAEEEGSGGISLWEGGVGGDG 2526
KL S LKK TAF KK+K ++E QR +LTK+ +LNL +Y+ E V++ E +LK +DV+ AVHLC HQRYAEF L+ F + +EE++ KE + R ++RL+ EL +GVF +G L+ +++L DG ++ ++T+L+ F R GED G++ RK + + L + V +++G+ R L+ F SL HL++ H+ L + T G L+EE++++ E+++ Y+ LL N ++LA L+ DMP LPE + +EE G + ++ GGDG
Sbjct: 11 KLDSSLKKNTAFVKKLKTITEQQRESLTKEFNSLNLTKYIGEAVNSFVEAKLKMSDVNCAVHLCSKFHQRYAEFTPQLLQAWNKSFQARRDDKEEKK-KEKGDKLRVDIRLVAELTVAGVFTDKEGLPLVASQLKALI-----DGDKE-----------------------AHNNLTILSSFCRHCGEDYAGLVPRKNRSLADKYNVI--LPKSEVFPCEIQGKCRQLLKDYFTSLVKHLQKDHKALQNQAWNNRRTLQTKGELSEERQKSFEDAQAAYQKLLMNASTLADLLDEDMPDLPEDDFKEEEEGNVDIFLAIKGGDG 303
BLAST of mRNA_E-siliculosus-1a_F_contig1013.139.1 vs. uniprot
Match: G4ZXG4_PHYSP (Uncharacterized protein n=6 Tax=Phytophthora TaxID=4783 RepID=G4ZXG4_PHYSP) HSP 1 Score: 162 bits (410), Expect = 3.240e-37 Identity = 117/364 (32.14%), Postives = 196/364 (53.85%), Query Frame = 1 Query: 1432 EAQLEAVSQLDLLQKEERARRELREKHTPEALKASRDAHEANKPKLKSDLKKTTAFTKKVKALSEDQRSALTKDVETLNLNRYVSEVVDAVAENRLKNADVSVAVHLCCLMHQRYAEFAEDLIPKLAAPFLSAPSGEEEREEKELLRRKRSNLRLLTELHASGVFDGSRLIVRIVRSLCGLEGKDGKRQRPGPGDAARRRDHQTVTAAPPPLRETDVTLLAGFVRAAGEDMVGVLQRKTVGMLKLAGEMGKLEREPVVDADVKGRLRSLVDGVFDSLCSHLERGHEQLGRLEKKMEKDRLTNGTLTEEKERNLEESRKGYEALLGNVTSLASSLNRDMPQLPEHEAEE-EGSGGISLWEGGVGG 2520
EAQ++A++QL L++ AR+ LR + E + A+R + KLKSD+K+++AF KK++ LSE +L +D LNL RYVSE V A+A+ LK AD++ AV + L+HQRY EFA + L F ++ + ++ K + R+R LRLL EL+ +GV D ++I I++ + +R++PG G + + +++ ++ +V LL F ++ G D +G PVV V+ + + ++ +C H +L+ + EK+ + G +TEE + L+ ++ +E L +V SLA +L+R++P LP E ++ G GGI +WEGG GG
Sbjct: 9 EAQVQALAQLQELKRLSEARQALRAANCAEGVAAARA--QLASLKLKSDIKRSSAFVKKLRVLSESNADSLLRDAAELNLTRYVSECVAALADAPLKAADLAAAVKVASLLHQRYEEFAPGMERALIGSFEASYASDD----KSKMLRRRLILRLLCELYLAGVLDDVQVIAHIIQRVA-------RREQPGAGKRGSKGNMSMGSSSSSGSQQLEVPLLVSFAKSVGVDFLGA---------------------PVVPKAVQQQCLACYLEAYEMICKFYLAQHATFLKLDTRNEKEEVNRGEVTEEHVQELKNAKLLFEKLQTSVNSLADALDREVPPLPVEEKDDGSGRGGILVWEGGEGG 338 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1013.139.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig1013.139.1 >prot_E-siliculosus-1a_F_contig1013.139.1 ID=prot_E-siliculosus-1a_F_contig1013.139.1|Name=mRNA_E-siliculosus-1a_F_contig1013.139.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=855bp GAPSSSTPRTHHNPPLCLLSLHLVANTLILEYIQQVISLGGNQGRKPACAback to top mRNA from alignment at E-siliculosus-1a_F_contig1013:120..9680- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_F_contig1013.139.1 ID=mRNA_E-siliculosus-1a_F_contig1013.139.1|Name=mRNA_E-siliculosus-1a_F_contig1013.139.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=9561bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1013:120..9680- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig1013:120..9680- >mRNA_E-siliculosus-1a_F_contig1013.139.1 ID=mRNA_E-siliculosus-1a_F_contig1013.139.1|Name=mRNA_E-siliculosus-1a_F_contig1013.139.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=5130bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1013:120..9680- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top |