prot_E-siliculosus-1a_F_contig11919.1226.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig11919.1226.1
Unique Nameprot_E-siliculosus-1a_F_contig11919.1226.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length86
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig11919.1226.1 vs. uniprot
Match: D7FUA1_ECTSI (Putative Leucine Rich Repeat Protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUA1_ECTSI)

HSP 1 Score: 145 bits (367), Expect = 9.660e-39
Identity = 74/86 (86.05%), Postives = 81/86 (94.19%), Query Frame = 0
Query:    1 ISSFSALSTLCGGSKASLEQIRKLVEALGINRSSPSTGLSETGTLRELDRLVAMAEDLGDIVSRHVVNEDIQRRELALPPGPKAYY 86
            ISSFS+LSTLCGGS+ASLEQ+ +LVEALGINRSSP TGL+ TGTL EL+RLVAMAEDLGD+VSRHV NEDIQRRELALPPGPKAYY
Sbjct:  441 ISSFSSLSTLCGGSQASLEQVGQLVEALGINRSSPGTGLNGTGTLGELNRLVAMAEDLGDMVSRHVTNEDIQRRELALPPGPKAYY 526          
BLAST of mRNA_E-siliculosus-1a_F_contig11919.1226.1 vs. uniprot
Match: D7FUA0_ECTSI (Leucine Rich Repeat Protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUA0_ECTSI)

HSP 1 Score: 145 bits (366), Expect = 1.330e-38
Identity = 74/86 (86.05%), Postives = 80/86 (93.02%), Query Frame = 0
Query:    1 ISSFSALSTLCGGSKASLEQIRKLVEALGINRSSPSTGLSETGTLRELDRLVAMAEDLGDIVSRHVVNEDIQRRELALPPGPKAYY 86
            ISSFSALSTLCGG   SLEQ+R+LVEALGINRSSP TGLSETGTL E++RLVAMAEDLG +VSRHV+NEDIQRRELALPPGPKAYY
Sbjct:  626 ISSFSALSTLCGGRHKSLEQVRQLVEALGINRSSPGTGLSETGTLGEVNRLVAMAEDLGGMVSRHVMNEDIQRRELALPPGPKAYY 711          
BLAST of mRNA_E-siliculosus-1a_F_contig11919.1226.1 vs. uniprot
Match: D7FUA2_ECTSI (Leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUA2_ECTSI)

HSP 1 Score: 144 bits (363), Expect = 3.340e-38
Identity = 74/86 (86.05%), Postives = 79/86 (91.86%), Query Frame = 0
Query:    1 ISSFSALSTLCGGSKASLEQIRKLVEALGINRSSPSTGLSETGTLRELDRLVAMAEDLGDIVSRHVVNEDIQRRELALPPGPKAYY 86
            ISSFSALSTLCGGS   LEQ+R+LVEAL INR SP TGLSETGTL EL+RLVAMAEDLGD+VSRHV+NEDIQRRELALPPGPKAYY
Sbjct:  414 ISSFSALSTLCGGSHKRLEQVRQLVEALDINRFSPGTGLSETGTLGELNRLVAMAEDLGDMVSRHVMNEDIQRRELALPPGPKAYY 499          
BLAST of mRNA_E-siliculosus-1a_F_contig11919.1226.1 vs. uniprot
Match: A0A6H5K9X6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9X6_9PHAE)

HSP 1 Score: 98.6 bits (244), Expect = 3.000e-25
Identity = 51/62 (82.26%), Postives = 57/62 (91.94%), Query Frame = 0
Query:    1 ISSFSALSTLCGGSKASLEQIRKLVEALGINRSSPSTGLSETGTLRELDRLVAMAEDLGDIV 62
            +SSFSALSTLCGGS++SLEQ+R+LVEALGINRSSP TGL ET TL EL+RLVAMAEDL DIV
Sbjct:    6 VSSFSALSTLCGGSRSSLEQVRQLVEALGINRSSPGTGLGETATLGELNRLVAMAEDLDDIV 67          
BLAST of mRNA_E-siliculosus-1a_F_contig11919.1226.1 vs. uniprot
Match: A0A6H5JSF6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSF6_9PHAE)

HSP 1 Score: 51.6 bits (122), Expect = 6.970e-6
Identity = 23/24 (95.83%), Postives = 23/24 (95.83%), Query Frame = 0
Query:   63 SRHVVNEDIQRRELALPPGPKAYY 86
            SRHVVNE IQRRELALPPGPKAYY
Sbjct:    8 SRHVVNEAIQRRELALPPGPKAYY 31          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig11919.1226.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D7FUA1_ECTSI9.660e-3986.05Putative Leucine Rich Repeat Protein n=1 Tax=Ectoc... [more]
D7FUA0_ECTSI1.330e-3886.05Leucine Rich Repeat Protein n=1 Tax=Ectocarpus sil... [more]
D7FUA2_ECTSI3.340e-3886.05Leucine rich repeat protein n=1 Tax=Ectocarpus sil... [more]
A0A6H5K9X6_9PHAE3.000e-2582.26Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JSF6_9PHAE6.970e-695.83Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig11919contigE-siliculosus-1a_F_contig11919:1243..1752 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig11919.1226.1mRNA_E-siliculosus-1a_F_contig11919.1226.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig11919 1241..1752 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig11919.1226.1 ID=prot_E-siliculosus-1a_F_contig11919.1226.1|Name=mRNA_E-siliculosus-1a_F_contig11919.1226.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=86bp
ISSFSALSTLCGGSKASLEQIRKLVEALGINRSSPSTGLSETGTLRELDR
LVAMAEDLGDIVSRHVVNEDIQRRELALPPGPKAYY
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