prot_E-siliculosus-1a_F_contig1171.1117.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig1171.1117.1
Unique Nameprot_E-siliculosus-1a_F_contig1171.1117.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length389
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1171.1117.1 vs. uniprot
Match: D8LHJ5_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LHJ5_ECTSI)

HSP 1 Score: 702 bits (1813), Expect = 1.980e-254
Identity = 371/388 (95.62%), Postives = 377/388 (97.16%), Query Frame = 0
Query:    1 MSVFGNAHWLLYLTHWTFALQTLYYFLALGSAIHLWLNSGRKRRAGWLWSSREIGGGGRELEGVGGGPAIKGGGVGRAENDSTRGRSKEQRKGLGSSAAAAVEAGKGGLPLPKPAXXXXXXXXXXXXXXXXXXXXXXXNGEHIALERWRKLQWGLLIVCADSAIIVTGVYWTFLYNGWTDQLNLQIHLFNALFMAANVFVGGSPFKWEHIGIAYIYGFLYLGFDILYYIFGSVFGYEDSRVVYFFLDWGGAPGRAVTVSLFLLSVGLPLSHGLHVAVAWGRDWVRRVRPGWGWQGTDEEDFERAMEMSGLRDTDVWAPLTGEGFDSEEEEMGGASVFHDYHHATARVPSGNGKRGGASRAVAGLRQQEKKKPDGVGASRGSAAGLYAR 388
            MSVFGNAHWLLYLTHWTFALQTLYYFLALGSAIHLWLNSGRKRRAGWLWSSREIGGGGRELEGVGGGPAIKG GVGRA NDS R RSKE+R+GLG SAAAAV+AGK GLPLPKPA XXXX XXXXXXXXXXXXXXXXXNGEHIALERWRKLQWGLLIVCADSAIIVTGVYWTFLYNGWTDQLNLQIHLFNALFMAANVFVGGSPFKWEHIGIAYIYGFLYLGFDILYYIFGSVFGYEDSRV+YFFLDWGGAPGR+VTVSLFLLSVGLPLSHGLHVAVAWGRDWVRR+RPGWGWQGTDEEDFER MEMSGLRDTDVWAPLTGEGFDSEEEEMGGASVFHDYHHA ARVPSGNGKRGGASRAVAGLRQQEKKKPDGVGASRGSAAG YAR
Sbjct:    1 MSVFGNAHWLLYLTHWTFALQTLYYFLALGSAIHLWLNSGRKRRAGWLWSSREIGGGGRELEGVGGGPAIKGRGVGRAGNDSARDRSKEKREGLGRSAAAAVDAGKEGLPLPKPAGXXXXVXXXXXXXXXXXXXXXXXNGEHIALERWRKLQWGLLIVCADSAIIVTGVYWTFLYNGWTDQLNLQIHLFNALFMAANVFVGGSPFKWEHIGIAYIYGFLYLGFDILYYIFGSVFGYEDSRVIYFFLDWGGAPGRSVTVSLFLLSVGLPLSHGLHVAVAWGRDWVRRMRPGWGWQGTDEEDFERVMEMSGLRDTDVWAPLTGEGFDSEEEEMGGASVFHDYHHAAARVPSGNGKRGGASRAVAGLRQQEKKKPDGVGASRGSAAGFYAR 388          
BLAST of mRNA_E-siliculosus-1a_F_contig1171.1117.1 vs. uniprot
Match: A0A7S2Y4E7_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y4E7_9STRA)

HSP 1 Score: 69.7 bits (169), Expect = 8.530e-10
Identity = 38/123 (30.89%), Postives = 62/123 (50.41%), Query Frame = 0
Query:  151 LQWGLLIVCADSAIIVTGVYWTFLYNGWTDQLNLQIHLFNALFMAANVFVGGSPFKWEHIGIAYIYGFLYLGFDILYYIFGSVFGYEDSRVVYFFLDWGGAPGRAVTVSLFLLSVGLPLSHGL 273
            +QW    +  D  +IVT VYW F+Y G        +H  N+L M  +  +   P    H  +A +YG +YL   ++Y+  G+    + S  +Y  +DW  +PG A   ++ L+ +G+PL H L
Sbjct:  135 VQWIAYYITLDCCVIVTIVYWLFVYEGKFGANTFVLHTINSLVMVFDQLIVAMPCGKMHFWVAQVYGVIYLVQTLIYW--GAD---KTSFPIYDIIDWSNSPGGAALWAIILICIGIPLMHML 252          
BLAST of mRNA_E-siliculosus-1a_F_contig1171.1117.1 vs. uniprot
Match: UPI000F551624 (protein rolling stone-like n=1 Tax=Pocillopora damicornis TaxID=46731 RepID=UPI000F551624)

HSP 1 Score: 60.5 bits (145), Expect = 1.100e-6
Identity = 30/131 (22.90%), Postives = 67/131 (51.15%), Query Frame = 0
Query:  143 IALERWRKLQWGLLIVCADSAIIVTGVYWTFLYNGWTDQLNLQIHLFNALFMAANVFVGGSPFKWEHIGIAYIYGFLYLGFDILYYIFGSVFGYEDSRVVYFFLDWGGAPGRAVTVSLFLLSVGLPLSHGL 273
            + +  + K  W +  + A++AI+VT +YWT ++ G T  L++  HL N++ + A++ +   P +  H+    + G  YL   ++++   +         +Y ++D+  +PG ++ +    + VG P+   L
Sbjct:  125 VKMSWYHKGLWVVFNIAANTAIMVTLLYWTLIFGGTTSGLDVSTHLINSVMIVADIMLSCVPVRILHVVYPLVLGICYLLTTVIFWAVDAT-NARGEPYIYSYIDYNNSPGFSIGLVCGFILVGQPVVQSL 254          
BLAST of mRNA_E-siliculosus-1a_F_contig1171.1117.1 vs. uniprot
Match: T1IT61_STRMM (Uncharacterized protein n=1 Tax=Strigamia maritima TaxID=126957 RepID=T1IT61_STRMM)

HSP 1 Score: 59.3 bits (142), Expect = 1.660e-6
Identity = 33/116 (28.45%), Postives = 58/116 (50.00%), Query Frame = 0
Query:  150 KLQWGLLIVCADSAIIVTGVYWTFLYNGWTDQL---NLQIHLFNALFMAANVFVGGSPFKWEHIGIAYIYGFLYLGFDILYYIFGSVFGYEDSRVVYFFLDWGGAPGRAVTVSLFL 262
            K+ W    +   ++I++T VYW FLY   T  L   N+QIH  N++ +  ++ +   PF+  H     ++G  YL F+++Y+I         + V+Y  LDW      ++ V + L
Sbjct:   62 KISWVFTNLSTSTSILITAVYWIFLYPDGTSTLDYGNIQIHAINSVVIVLDLIIISIPFRLFHFYQPLLFGLSYLIFNLIYWII-------TNEVIYSILDWQKVTKSSIFVIVML 170          
BLAST of mRNA_E-siliculosus-1a_F_contig1171.1117.1 vs. uniprot
Match: A0A1J1HKH2_9DIPT (CLUMA_CG001695, isoform A n=1 Tax=Clunio marinus TaxID=568069 RepID=A0A1J1HKH2_9DIPT)

HSP 1 Score: 59.3 bits (142), Expect = 3.930e-6
Identity = 35/99 (35.35%), Postives = 51/99 (51.52%), Query Frame = 0
Query:  150 KLQWGLLIVCADSAIIVTGVYWTFLYNGWTDQLNLQIHLFNALFMAANVFVGGSPFKWEHIGIAYIYGFLYLGFDILYYIFGSVFGYEDSRVVYFFLDW 248
            K  W    V   SA+++T VYWT L++G TD L++ IH  N+  M  ++ +   P    H       G LYL F ++YY  G V   + +R +Y  LDW
Sbjct:  108 KFLWFWSNVAVTSALVITIVYWTLLFDGRTDALDILIHGGNSAAMIIDLLIACHPMYIIHFIWPVGLGILYLIFTVIYYFAGGVDA-QGNRYIYDVLDW 205          
BLAST of mRNA_E-siliculosus-1a_F_contig1171.1117.1 vs. uniprot
Match: UPI001CF746A7 (protein rolling stone-like n=1 Tax=Tribolium madens TaxID=41895 RepID=UPI001CF746A7)

HSP 1 Score: 55.8 bits (133), Expect = 3.570e-5
Identity = 35/137 (25.55%), Postives = 71/137 (51.82%), Query Frame = 0
Query:  147 RWRKLQWGLLIVCADSAIIVTGVYWTFLYNGWT---DQLNLQIHLFNALFMAANVFVGGSPFKWEHIGIAYIYGFLYLGFDILYYIFGSVFGYEDSRVVYFFLDWGGAPGRAVTVSLFLLSVGLPLSHGLHVAVAWG 280
            ++ KL W L ++  D+A+ +T +YW+ +Y+      + +N  +H  N++ M  ++FV   P +  H   + ++G  Y+ F +++Y  G +   + +  +Y  LDW     + +T ++  L+  L L   +HV   WG
Sbjct:  118 KFYKLYWMLNVIATDTALEITILYWSLIYDDKVISFNAMNFFLHANNSVLMMIDLFVVAYPTRLLHCCYSVVFGICYIVFSVIFYAAGGI-SRKGNVYIYKILDWR----KPLTTTVICLAA-LALVVVIHVT-CWG 247          
BLAST of mRNA_E-siliculosus-1a_F_contig1171.1117.1 vs. uniprot
Match: A0A1B0FKF6_GLOMM (Uncharacterized protein n=1 Tax=Glossina morsitans morsitans TaxID=37546 RepID=A0A1B0FKF6_GLOMM)

HSP 1 Score: 53.9 bits (128), Expect = 9.990e-5
Identity = 28/95 (29.47%), Postives = 47/95 (49.47%), Query Frame = 0
Query:  151 LQWGLLIVCADSAIIVTGVYWTFLYNGWTDQL---NLQIHLFNALFMAANVFVGGSPFKWEHIGIAYIYGFLYLGFDILYYIFGSVFGYEDSRVV 242
            + W + ++   S+I+VT +YW FLY    D L   N+  H+ N + M +++ +   P +  HI +   YG +Y  F I+Y   G    Y    V+
Sbjct:  124 IYWAMHVLSLVSSILVTVIYWCFLYEANEDSLSAANILTHILNCVSMLSDLLIVAHPLRLLHIFLPIAYGLIYAFFSIIYQFSGGHNRYNSFHVL 218          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1171.1117.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 7
Match NameE-valueIdentityDescription
D8LHJ5_ECTSI1.980e-25495.62Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A7S2Y4E7_9STRA8.530e-1030.89Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
UPI000F5516241.100e-622.90protein rolling stone-like n=1 Tax=Pocillopora dam... [more]
T1IT61_STRMM1.660e-628.45Uncharacterized protein n=1 Tax=Strigamia maritima... [more]
A0A1J1HKH2_9DIPT3.930e-635.35CLUMA_CG001695, isoform A n=1 Tax=Clunio marinus T... [more]
UPI001CF746A73.570e-525.55protein rolling stone-like n=1 Tax=Tribolium maden... [more]
A0A1B0FKF6_GLOMM9.990e-529.47Uncharacterized protein n=1 Tax=Glossina morsitans... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR12242UNCHARACTERIZEDcoord: 6..288
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 280..388
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 237..255
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 153..173
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..11
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 38..152
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 185..202
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 203..213
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 256..279
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 214..236
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 12..37
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 174..184
NoneNo IPR availableTMHMMTMhelixcoord: 214..236
NoneNo IPR availableTMHMMTMhelixcoord: 185..207
NoneNo IPR availableTMHMMTMhelixcoord: 153..175
NoneNo IPR availableTMHMMTMhelixcoord: 256..278
NoneNo IPR availableTMHMMTMhelixcoord: 15..37
IPR039860Protein rolling stonePANTHERPTHR12242:SF1LD06593P-RELATEDcoord: 6..288

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig1171contigE-siliculosus-1a_F_contig1171:29351..35101 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig1171.1117.1mRNA_E-siliculosus-1a_F_contig1171.1117.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig1171 28963..35224 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig1171.1117.1 ID=prot_E-siliculosus-1a_F_contig1171.1117.1|Name=mRNA_E-siliculosus-1a_F_contig1171.1117.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=389bp
MSVFGNAHWLLYLTHWTFALQTLYYFLALGSAIHLWLNSGRKRRAGWLWS
SREIGGGGRELEGVGGGPAIKGGGVGRAENDSTRGRSKEQRKGLGSSAAA
AVEAGKGGLPLPKPAGGGGEVAAKRGGDGHGAAAAGGGNGEHIALERWRK
LQWGLLIVCADSAIIVTGVYWTFLYNGWTDQLNLQIHLFNALFMAANVFV
GGSPFKWEHIGIAYIYGFLYLGFDILYYIFGSVFGYEDSRVVYFFLDWGG
APGRAVTVSLFLLSVGLPLSHGLHVAVAWGRDWVRRVRPGWGWQGTDEED
FERAMEMSGLRDTDVWAPLTGEGFDSEEEEMGGASVFHDYHHATARVPSG
NGKRGGASRAVAGLRQQEKKKPDGVGASRGSAAGLYAR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR039860Rost