mRNA_E-siliculosus-1a_F_contig1008.110.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female
You are viewing an mRNA, more information available on the corresponding polypeptide page
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1008.110.1 vs. uniprot
Match: A0A6H5L1S6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L1S6_9PHAE) HSP 1 Score: 2491 bits (6457), Expect = 0.000e+0 Identity = 2131/2801 (76.08%), Postives = 2166/2801 (77.33%), Query Frame = 1 Query: 3235 MARKGGGSGGRVQHVRGNSYDKDSRGGRGACRHRAGPGRSKDFEAGDPYGRDPRGGGSSSGDRNRSKSSERRGRGRDIDEDVMRARRKYSGGEVRSPEATPRRHDARRRPETPASGSTKSKPSPRGRASLTPLKSAGSSTDHHLDGASDGSASRGRGTKGHQPVHAPNTICAQFDQVPLPPSIGYNGMGGDDFISSLEDPLSDSFMCGAFPNVGSPVRRSSRSSSITSPSRANHVSSPAITAGGGDAAAMASPDAGTPGPNTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGKSGCGRDIAPMEGGVVQREREQVCNDTMTTTKDDKHGAPYSSALSCLPPAPEEPSAVLPTQLAAVEVGGPTASPLPTE-QSPQEGVAAARPSVPPLPPADGGVEHAGTAEEGSASPAAAALAGTETVAVRKEDAEKDPTTACASEETRGSAAANDTGPSPAGGGAVGEAVGNGSRQDGVSDRRRSEVGXXXXXXXXXXXXXXXPNEGEGGEQGKEEDGIQEDEQSAGDKTPRRSTDVKSSWYSKGTMVVLHCHSPAQVRSTSNPVLPLSDLLGRPARVIREPTHRMGQRYHLVEFQPWEGGPDTVVTLRAKAKLLKPAPLDPVSAPAVVSDGRDSGVSTDGGSASARLSTARAESTPAGAGTAQRVSRKTVAATRPRRRSTRGAIKATKQSVSVDAGEAGGEQPPLATARVVKREGKGNEEAEEDDMEVGVEGEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAEERVGKXXXXXXXXXXKGQE-----------EGVATKAVLDTMAIPKEGEPLDDPRKPMLIPVGTRVVVKQAPAESSRPRGCQLKTSDLVGRTGVVTKMATHVQGTRHHMVSFEPWPGGLSTTTSWNFARKRLALCPSGIRSGGASVSGTXXXXXXXXXXXXGKVXXXXXXXXXXXXXXXXXXXXXXXXXXXVEGAKEGGAARPTPPNTENLPAGTVVVVRSVETDPGRTLKFARDETYEAGFQEVLGREGIVVSGPTSTTKGFRYHLVQYEPWEGGPTRPFTWNVKVASLEVLRRPPTDFASGDSVQETDANMAEAGTPLEEXXXXXXXXXXPTQGGNAAEAGAEAEAEPDSAEVPAAGGPPAAETSTKTVAWEEPLSPRGRSRAQRHPSSLYGTIADGGEQGDPGVEEQKSSESEARVLLXXXXXXXXXXXXXXXXXXXSRSKEASXXXXXXXXXXAGRGTISNDSGQAPGSDKDIPQGASSSSSGEAQENLPSHRAAADGLGCGSVSPPTRTTRSSSISVESAADVAESGGAVPAVTDHEASRSEGKRGAAEMAANGEPGRLRVEVEEGETEMGAGLDSPSSAVKRRRSQATLPPSDDPLPEESGALNSDSPARAGPADEGAVVSGRCETEEPLSATQIATAESERVAAEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAKKQAQDALDAQAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXS----------------------------------------------------------------------------TAAGAAGDAQAAPRTSS----------------------------DGEKTREESSPTVVGSDVEGVQPQQRPXXXXXXXXXXXXXXXXXXXXXXXXXXXGAAGATWDGARENVRAIRSTRKAAAVATQKIRKRXXXXXXXXXXXXXXXXXXXXXXXXXSHGNELSPDNDNAPREDEGGAGRAEKGSEDNE-------------------------------GRAEVAVEEEEEGEA--RPPPLETGKRSGDGLPDSSSNLAEPATAAVAAVPAEAAVPCEPTDTGAVPSGGTHSAERPPSXXXXXXXXXXXXXXXXXXXXXXXDAASDPADAEANATLDAVEAPPPGAEEXXXXXXXXXXXXAGAVAAAPXXXXXXXXXXXX-DAVSVPATIEAPACGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDVVVTADTVXXPAASAXXXXXXXXXXXXXXXXXFPAVERQVRALXXXXXXXXXXXXXXXXXATSGPVEGVTGAGGVDMQRLLAMVQGLQEDMQGVKTQLKRRRSSAANEEVGRARHRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDRSDCSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPARRIHAADQGYYPYAAXXXXXXXXXXPPPPGYFHYPGGAPLQGGAVPGYPSMYPGLVYGQGQGRPDGSGRGPVEWEGXXXXXXXXXXXXXXXESEHSQQRDHRLLGDDGARGRSASSPVKDDEDDVNTPRAAATSGPRAADLPDPAVAEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRAAGGPSRRHSDGSYGLHDGSGYRGAGGVAEQQGGFGYPLGGAPPGGLVDPRFAPPAAPMGRGGYPAASSPYMIPPSHPPRGVYHEHYGEATGWAAGGAHHPYHAPVHPXPPHHKLYEGGNVSRRRRTRSPAAESVEGEREGGGSDDSGGSARAERGKGSRSRSGSWESEHGAT 11187
MAR GGG GGRVQHVRGNSYDKDSRGGRGACR AGPGRSKDFEA DPYGRDPRGGGSSSGDRNRSK G RDIDEDVMRARRKYSG EVRSPEAT RR DARRRPETPASGSTKSKPSPRGRAS TPLKS GSSTDHHL+GASDGSASRGRGTKGHQPVHAPNTICAQFDQVPLPPSIGYNGMGGDDFISSLEDPLSDSFM GAFP+VGSPVRRSSRSSSITSPSRANHV SPAITAGGGDAAAMASPDA TPGPN P GKS CGRDIAPMEGGV+QRER QVCND MTTT D HGAPYSSA+SCLPPAPEEPSAVLPTQLAA EVGGPTASPLPT QSPQEG AARPS+PP PADGGVEH GTAE+GSASPAAAALAGTE VAVRKEDAEKDPTT CASEET GSAAA+D PSPA GGAVGEAVGNGSRQD VSD RRSE+G XXXXXXXXXXXXXX GIQEDEQSAGDKTPRRSTDVKSSWYSKGTMVVLHC SPAQVRSTSNPVLPLSDLLGRPARVI+EPTHRMGQRYHLVEFQPWEGGPDTVVTLRAKAKLLKPAPLD VSAPAVVSDGRDSGVSTDGGSA ARLSTARAE TP+GAG AQRVSRKTVAATRPRRRSTRG IKATKQSVSVDAGEAGGEQPP ATARVVKREGKGN+EAEE+DMEV VEGEXXXXXXXXXXXXXXX +ERVGK XXX EGVA AVLDTMA+PKEGEPLDDPRKPMLIPVGTRVVVKQAPAESSRPRGCQLKTSDLVGRTGVVTKMATHVQGTRHHMVSFEPWPGG STTTSWNFARKRLALCPSGI SGGASVSGT G XXXXXXXXXXXXXXXXXXXX GGAARPTPPNTENLPAGTVVVVRSVETDPGRTLKFARDETYEAGFQEVLGREGIVVSGPTSTTKGFRYHLVQYEPWEGGPTRPFTWNVKVASLEVLR PPTDF+SGD+VQE D NMAEA TP EE PTQ GNAAEAGAE EPDSAEVPAAGGPPAAETSTKTVA EEP PRGRSRA+RHPSSLYGT ADGGEQGDPGVEEQKSSESEARVLLXXXXXXXXXXXXXXXXXXXSRSKE XXXXXXXX AGRGTI NDSGQAPGSDK+IPQ ASSSSSG AQENLPS RAAADGLGCGSVSPPTRTTRSSSIS ESAADVAESGG VPAVTDHEASR EGKRGAAEMAANGE GRLRVEVEEGET +GAGLDSP+SAVKRRRSQATLP S+DPLP+E GALNSDSPAR GPADEGAVVSGRCETEEPLSATQIATAESERVA EA XXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXX XXXX XXXXXXXXXXXXXXX AKKQAQDALDA XXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX +A A G + P + DGEKTR+ESSPTVVGSDVEGVQPQQ XXXXXXXXX GAAGATWDGARENVRAIRSTRKAAAVATQKIRKR SHGNELSPD DNAPREDEGGAG AEKGSED E R EVAVEE RPPPLETGKRSGDGLPDSSSNLAEPATAAVAAVPAE AVPCEPTDTGA+PSGGTHSAER PS XXXXXXXXXXXXXXXXXXXXDAASDPADAEANATLDAV+APP AEE XXX XXXXXXXXXXXX DAVSV ATIEAPA G XXXXXXXXXXXXXXXXXXXXXXXXX XX XXXXXXXXXXXXXX QVRAL ATSGPVEG+ GAGGVDMQR+LA GLQEDMQGVKTQLKRRRSSAANEEVGRARH XXXXXXXXXXXXXXXXXXXXXXXXXX D SDCSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX ARRIHAA QGYYPYAAXXXXXXXXXXPPPPGYFHYPGG PLQGGAVPGYPSMYPGLVYGQGQGRPDG GRGPVEWEG XXXXXXX HSQQRD RLL D GARGRSASSPVKDD +GPRAADLP PAVAE+ XXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX RA GGPSRRHSDGS+GLH GSGY GAGG+AEQQGGF YPLG AP GG VDPRFAPP APMGRGGYPAASSPYMIPPSHPPRGVYHEHYGEATGWAAGGAHHPYHAPVHP PPHH+LYEGGNVSRRRRTRSPAAESVEGERE GG GSWESEH AT
Sbjct: 1 MARSGGGGGGRVQHVRGNSYDKDSRGGRGACRDCAGPGRSKDFEASDPYGRDPRGGGSSSGDRNRSKXXXXXGXXRDIDEDVMRARRKYSGAEVRSPEATLRRQDARRRPETPASGSTKSKPSPRGRASFTPLKSTGSSTDHHLEGASDGSASRGRGTKGHQPVHAPNTICAQFDQVPLPPSIGYNGMGGDDFISSLEDPLSDSFMSGAFPSVGSPVRRSSRSSSITSPSRANHVPSPAITAGGGDAAAMASPDAATPGPNIPGAPAPTPPFRSSGPGPTTASNEPKAIAASGKSSCGRDIAPMEGGVIQRERGQVCNDAMTTTNHDNHGAPYSSAISCLPPAPEEPSAVLPTQLAASEVGGPTASPLPTAGQSPQEGGTAARPSMPPPLPADGGVEHVGTAEDGSASPAAAALAGTEAVAVRKEDAEKDPTTPCASEETGGSAAADDIRPSPADGGAVGEAVGNGSRQDKVSDSRRSELGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXGIQEDEQSAGDKTPRRSTDVKSSWYSKGTMVVLHCDSPAQVRSTSNPVLPLSDLLGRPARVIQEPTHRMGQRYHLVEFQPWEGGPDTVVTLRAKAKLLKPAPLDSVSAPAVVSDGRDSGVSTDGGSARARLSTARAEITPSGAGAAQRVSRKTVAATRPRRRSTRGTIKATKQSVSVDAGEAGGEQPPPATARVVKREGKGNKEAEENDMEVDVEGEXXXXXXXXXXXXXXXDAISDKKQSAIIHSPGEYSSMTKERVGKGRSEEEKXXXXXXXXXXXXXXXXXXEGVAIAAVLDTMAMPKEGEPLDDPRKPMLIPVGTRVVVKQAPAESSRPRGCQLKTSDLVGRTGVVTKMATHVQGTRHHMVSFEPWPGGPSTTTSWNFARKRLALCPSGIGSGGASVSGTRGVGAAPASRREGNAKGAAAGAXXXXXXXXXXXXXXXXXXXXX-----GGAARPTPPNTENLPAGTVVVVRSVETDPGRTLKFARDETYEAGFQEVLGREGIVVSGPTSTTKGFRYHLVQYEPWEGGPTRPFTWNVKVASLEVLRHPPTDFSSGDNVQEADVNMAEASTPSEERKEEAAA---PTQAGNAAEAGAEXXXEPDSAEVPAAGGPPAAETSTKTVASEEPPLPRGRSRARRHPSSLYGTTADGGEQGDPGVEEQKSSESEARVLLXXXXXXXXXXXXXXXXXXXSRSKEXXXXXXXXXXAAAGRGTIGNDSGQAPGSDKNIPQCASSSSSGGAQENLPSRRAAADGLGCGSVSPPTRTTRSSSISAESAADVAESGGTVPAVTDHEASRGEGKRGAAEMAANGESGRLRVEVEEGETAVGAGLDSPASAVKRRRSQATLPSSNDPLPDEGGALNSDSPARTGPADEGAVVSGRCETEEPLSATQIATAESERVATEAAXXXXXXXXXXXXXXXXXXRVAXXXXXXXXXXXXXXXXXXXQRADRVMATKAANXXXXEQRXXXXXXXXXXXXXXXA-------AKKQAQDALDAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAALXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSAREAQGTEETTPEAQAAXXXXXXXXXXXXXXXXXXXXXXXXXXXDGEKTRKESSPTVVGSDVEGVQPQQXXXXXXXXXXXGATVLPAERRAQEECQQEGAAGATWDGARENVRAIRSTRKAAAVATQKIRKRKSNGGGCTDRAAGREGKRKCAAASSSHGNELSPDIDNAPREDEGGAGCAEKGSEDKEVRPQRTGCKAAIPRNVPRPRCLAFALQKHTKDRVEVAVEEXXXXXXXXRPPPLETGKRSGDGLPDSSSNLAEPATAAVAAVPAEXAVPCEPTDTGALPSGGTHSAERAPSPAVXXXXXXXXXXXXXXXXXXXXDAASDPADAEANATLDAVKAPPADAEEVAVAVSAEAXXXXXXXXXXXXXXXXXXXXXXXXDAVSVLATIEAPAYGSASARSDDAVAATAMVEEPSVAAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--------XXXXXXXXXXXXXXXXXXXXQVRALAASVAAAGAVPAAAGGPATSGPVEGLAGAGGVDMQRILA---GLQEDMQGVKTQLKRRRSSAANEEVGRARH-XXXXXXXXXXXXXXXXXXXXXXXXXXSAPSATDSDHSDCSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXARRIHAAQQGYYPYAAXXXXXXXXXXPPPPGYFHYPGGPPLQGGAVPGYPSMYPGLVYGQGQGRPDGIGRGPVEWEGGGGQHSFEXXXXXXXXXXHSQQRDQRLLSDGGARGRSASSPVKDDXXXXXXXXXXXXAGPRAADLPVPAVAEKQAAXXXXXXXXRCKAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDGSGDGG------RAPGGPSRRHSDGSHGLHVGSGYCGAGGIAEQQGGFRYPLGVAPSGGFVDPRFAPPVAPMGRGGYPAASSPYMIPPSHPPRGVYHEHYGEATGWAAGGAHHPYHAPVHPPPPHHRLYEGGNVSRRRRTRSPAAESVEGEREVGGXXXXXXXXXXXXXXXXXXXXGSWESEHMAT 2768
BLAST of mRNA_E-siliculosus-1a_F_contig1008.110.1 vs. uniprot
Match: D7FW82_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FW82_ECTSI) HSP 1 Score: 2041 bits (5287), Expect = 0.000e+0 Identity = 1603/1885 (85.04%), Postives = 1625/1885 (86.21%), Query Frame = 1 Query: 3235 MARKGGGSGGRVQHVRGNSYDKDSRGGRGACRHRAGPGRSKDFEAGDPYGRDPRGGGSSSGDRNRSKSSERRGRGRDIDEDVMRARRKYSGGEVRSPEATPRRHDARRRPETPASGSTKSKPSPRGRASLTPLKSAGSSTDHHLDGASDGSASRGRGTKGHQPVHAPNTICAQFDQVPLPPSIGYNGMGGDDFISSLEDPLSDSFMCGAFPNVGSPVRRSSRSSSITSPSRANHVSSPAITAGGGDAAAMASPDAGTPGPNTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGKSGCGRDIAPMEGGVVQREREQVCNDTMTTTKDDKHGAPYSSALSCLPPAPEEPSAVLPTQLAAVEVGGPTASPLPT-EQSPQEGVAAARPSVPPLPPADGGVEHAGTAEEGSASPAAAALAGTETVAVRKEDAEKDPTTACASEETRGSAAANDTGPSPAGGGAVGEAVGNGSRQDGVSDRRRSEVGXXXXXXXXXXXXXXXPNEGEGGEQGKEEDGIQEDEQSAGDKTPRRSTDVKSSWYSKGTMVVLHCHSPAQVRSTSNPVLPLSDLLGRPARVIREPTHRMGQRYHLVEFQPWEGGPDTVVTLRAKAKLLKPAPLDPVSAPAVVSDGRDSGVSTDGGSASARLSTARAESTPAGAGTAQRVSRKTVAATRPRRRSTRGAIKATKQSVSVDAGEAGGEQPPLATARVVKREGKGNEEAEEDDMEVGVEGEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAEERVGKXXXXXXXXXX---------KGQEEG--------VATKAVLDTMAIPKEGEPLDDPRKPMLIPVGTRVVVKQAPAESSRPRGCQLKTSDLVGRTGVVTKMATHVQGTRHHMVSFEPWPGGLSTTTSWNFARKRLALCPSGIRSGGASVSGTXXXXXXXXXXXXGKVXXXXXXXXXXXXXXXXXXXXXXXXXXXVEGAKEGGAARPTPPNTENLPAGTVVVVRSVETDPGRTLKFARDETYEAGFQEVLGREGIVVSGPTSTTKGFRYHLVQYEPWEGGPTRPFTWNVKVASLEVLRRPPTDFASGDSVQETDANMAEAGTPLEEXXXXXXXXXXPTQGGNAAEAGAEAEAEPDSAEVPAAGGPPAAETSTKTVAWEEPLSPRGRSRAQRHPSSLYGTIADGGEQGDPGVEEQKSSESEARVLLXXXXXXXXXXXXXXXXXXXSRSKEASXXXXXXXXXXAGRGTISNDSGQAPGSDKDIPQGASSSSSGEAQENLPSHRAAADGLGCGSVSPPTRTTRSSSISVESAADVAESGGAVPAVTDHEASRSEGKRGAAEMAANGEPGRLRVEVEEGETEMGAGLDSPSSAVKRRRSQATLPPSDDPLPEESGALNSDSPARAGPADEGAVVSGRCETEEPLSATQIATAESERVAAEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAKKQAQDALDAQAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSTAAGAAGDAQAAPRTSSD----------------------------GEKTREESSPTVVGSDVEGVQPQQRPXXXXXXXXXXXXXXXXXXXXXXXXXXXGAAGATWDGARENVRAIRSTRKAAAVATQKIRKRXXXXXXXXXXXXXXXXXXXXXXXXXSHGNELSPDNDNAPREDEGGAGRAEKGSEDNE 8751
MARKGGGSGGR QHVRGNSYDKDSRGGRGACR R+GPGRSKDFEA DPYGRDPRGGGSSSGDRNRSKSSERRGRGRDIDEDVMRARRKYSGGEVRSPEATPRR DARRRPETPA+GSTKSKPSPRGRASLTPLKSAGSSTDHHL+GA+DGSASRGRGTKGHQPVHAPNTICAQFDQVPLPPSIGYNGMGGDDFISSLEDPLSDSFMCGAFPNVGSPVRRSSRSSSITSPSRANHVSSPAIT GGGDAAAMASPDA TP XXXXXXXXXXXXXXXXXXXXX GKSGCGRDIAPMEGGV+QREREQVCND MTTTKDD HGAPYSSALSCLPPAPEEPSAVLPTQLAA EVGGPTASPLPT EQSPQEG AA RPSVPPLPPADGGVE AGTAE+GSASPAAAALAGTE VAVRKEDAEKDPTT CASEET GSAAA+D GPSP G GAVGEAVGNGSRQDGVSDRRRSEVG XX PNEGEGGEQGKEEDGIQEDEQSAG++TPRRSTDVKSSWYSKGTMVVLHC SPAQVRSTSNPVLPLSDLLGRPARVIREPTHRMGQRYHLVEFQPWEGGPDTVVTLRAKAKLLKPAPLD V APAVVSDGRDSGVSTDGGSASARLSTARAESTPAGAG AQRVSRKTVAATRPRRRSTRGAIKATKQSVSVDAGEAG EQPPLATARVVKREGKGNEEAEEDDMEV VEGEXXXXXXXXXXXXXXXXX AEERVGK XXX KGQ VATKAVLDTMA+PKEGEPLDDPRKPMLIPVGTRVVVKQAPAESSRPRGCQLKTSDLVGRTGVVTKMATHVQGTRHHMVSFEPWPGG STTTSWNFARKRLALCPSGI SGGASVSG+ GK XXXXXXXXXXXXXXX GAKEGG ARPTPPNTENLPAGTVVVVRSVETDPGRTLKFARDETYEAGFQEVLGREGIVVSGPTSTTKGFRYHLVQYEPWEGGPTRPFTWNVKVASLEVLRRP TDFASGDSVQE D NMAEAGTP EEXXXXXX PTQGGNAAEAGA AE STKTVA EEPLSPRGRSRA+RHPSSLYGT ADGGEQGDPG+EEQKSSESEARVLLXXXXXXXXXXXXXXXXXXXSRSKEA XXXXXX AGRGTISN SGQAPGS KDIPQGASSSSS EAQENLPSHR AADGLGCGSVSPP+RTTRSSSIS ESAADVAE GGAVPAVTDHEASRSEGKRGAAEMAANGEPGRLRVEVEEGET +GAGLDSP+SAVKRRRSQATL SDDPLPEESGALNSDSPARAGPAD+GAVVSGRCETEEPLSATQ+ATAESERVAAEAXXXXXXXXXXXXXXXXX X XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXX AKKQAQDALDA XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX X XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX +A A G + P + + GEKTREESSPTVVGSDVEGVQPQQ XXXXXXXXXXXXXXXXXXXXXXXXXXXGAAGATWDGARENVRAIRSTRKAAAVATQKIRKR XXXX SH NELSPDNDNAPREDEGGAGRAEKGSED E
Sbjct: 1 MARKGGGSGGRAQHVRGNSYDKDSRGGRGACRDRSGPGRSKDFEASDPYGRDPRGGGSSSGDRNRSKSSERRGRGRDIDEDVMRARRKYSGGEVRSPEATPRRQDARRRPETPAAGSTKSKPSPRGRASLTPLKSAGSSTDHHLEGATDGSASRGRGTKGHQPVHAPNTICAQFDQVPLPPSIGYNGMGGDDFISSLEDPLSDSFMCGAFPNVGSPVRRSSRSSSITSPSRANHVSSPAITVGGGDAAAMASPDAATPXXXXXXXXXXXXXXXXXXXXXXXXXXEPKATAASGKSGCGRDIAPMEGGVIQREREQVCNDAMTTTKDDMHGAPYSSALSCLPPAPEEPSAVLPTQLAAAEVGGPTASPLPTTEQSPQEGDAAVRPSVPPLPPADGGVEDAGTAEDGSASPAAAALAGTEAVAVRKEDAEKDPTTPCASEETGGSAAADDIGPSPTGEGAVGEAVGNGSRQDGVSDRRRSEVGGGGDDAAASXXDATAPNEGEGGEQGKEEDGIQEDEQSAGERTPRRSTDVKSSWYSKGTMVVLHCDSPAQVRSTSNPVLPLSDLLGRPARVIREPTHRMGQRYHLVEFQPWEGGPDTVVTLRAKAKLLKPAPLDSVFAPAVVSDGRDSGVSTDGGSASARLSTARAESTPAGAGAAQRVSRKTVAATRPRRRSTRGAIKATKQSVSVDAGEAGCEQPPLATARVVKREGKGNEEAEEDDMEVDVEGEXXXXXXXXXXXXXXXXXIGAKKQSAIVHSSGGDNSMAEERVGKGRSKEEEXXXXXXXGXXXXKGQXXXXXXXXXXXVATKAVLDTMAMPKEGEPLDDPRKPMLIPVGTRVVVKQAPAESSRPRGCQLKTSDLVGRTGVVTKMATHVQGTRHHMVSFEPWPGGPSTTTSWNFARKRLALCPSGISSGGASVSGSRGAGAAPASRREGKAKGAGAEAXXXXXXXXXXXXXXX-----XXGAKEGGRARPTPPNTENLPAGTVVVVRSVETDPGRTLKFARDETYEAGFQEVLGREGIVVSGPTSTTKGFRYHLVQYEPWEGGPTRPFTWNVKVASLEVLRRPRTDFASGDSVQEADVNMAEAGTPWEEXXXXXXAA--PTQGGNAAEAGAXXXXXXXXXXXXXXXXXXXAEASTKTVASEEPLSPRGRSRARRHPSSLYGTTADGGEQGDPGMEEQKSSESEARVLLXXXXXXXXXXXXXXXXXXXSRSKEAXXXXXXXATAAAGRGTISNGSGQAPGSVKDIPQGASSSSSREAQENLPSHRVAADGLGCGSVSPPSRTTRSSSISAESAADVAEIGGAVPAVTDHEASRSEGKRGAAEMAANGEPGRLRVEVEEGETAVGAGLDSPASAVKRRRSQATLLLSDDPLPEESGALNSDSPARAGPADKGAVVSGRCETEEPLSATQMATAESERVAAEAXXXXXXXXXXXXXXXXXAARVAEENAKAAAXKEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKAMXXXXXXXX-AKKQAQDALDAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHXAKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--SAREAQGTEETTPESQAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGEKTREESSPTVVGSDVEGVQPQQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAAGATWDGARENVRAIRSTRKAAAVATQKIRKRKSDGGGYTDRAAGSEGKRKXXXXSSSHDNELSPDNDNAPREDEGGAGRAEKGSEDKE 1875
BLAST of mRNA_E-siliculosus-1a_F_contig1008.110.1 vs. uniprot
Match: A0A6H5L398_9PHAE (PHD-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L398_9PHAE) HSP 1 Score: 821 bits (2120), Expect = 9.830e-264 Identity = 558/737 (75.71%), Postives = 571/737 (77.48%), Query Frame = 1 Query: 1 MAAMLFSDAGGKEGNMWGDNSANSNGGVSSERNGAGSPTGNGVPAAGAFATCHACTTARVSRSVTCQGCEKTFHWTCMGFYEHKYQRPGPNWRCKDCKTAEGGGGGEVASSAAPATQAVQLPESGEAVDVDDDQSALATPPETVPLAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPTVPPSTGERICPVCKKGLGRKRTMDCSVCRTPSHAGCVNVRGAETPKSWVCRDCKPGAQTTAGGYPGDGAGARAASPPVAAQTRPLVASAPPQAPQAPPPEDLLGHLIHQRPRSRQKQSISPIVSTATLAYRRDESASRGASGSDSVGVLGEDLPDFEESGEETDSDQDRRSPRSSAAAKVAETAAKELVATAKLESLMSQRDKVMGDMGVTTAAASGKEGRERGGSTSSGSGAAAERGEGEDRGRDAPAEGVEESSPSPRRSQRKGTAQXXXXXXXXXEPPSALLPLPPLPGFSSQSSPXNPTATPQASGTTATGAPRXXXXXXXXXXXLPSAGPSVSVQQHVVGDAGVEPPLPXXXXXXXXXPDAPPPSTASTPSSPGVQLSSTANTVPGAEPFSPSAEGWSLGHTGAQPPLXXXXXXXXXXXXXXXXXXXXXXXRSTGGIGWATGASNAEMELIPLGRSSSGGQGKASSETDRSKGAGAKAVGTGRKSFLFSDEEQRAMEDVSGGGGKAAKGKPTAIPAARKKVKKKLGAGIKPKVATVFTDEGQAIAARK 2211
MAAMLFSDAGGKEGNMWGDNSANSNGGV SE+NGAGSPTGNGVPAAGAFATCHACTTARVSRSVTCQGCEKTFHWTCMGFYEHKYQRPGPNWRCKDCKTAE GGG E AS AA ATQAVQL ESGEA+DVDD +LATPPETV L A XXX PTVP STGE +CPVCKKGLGRKRTMDCS+CRTPSHAGCVNVRGAETPKSWVCRDCKP AQ TAGGYPGDGA A+AA+ VAAQT SISPIVSTATLA RRDESASRGASGSDSVGV GEDLPDFE SGEETDSDQDRRSPRSSAAAKVAETAAKELVATAKLE+LMSQRDKVMG MGV TAAASGKEGRERGGSTS+GSG AAERGEGED GRDAPAEGVE SSPSP RSQRKG A XXXXXXXXX P+P LP X XXXXXXXXXXXLPSAGP VSV+QHVVGDAG+E XXXXXXXXX STASTPSS GVQ SSTA+TVPGAEPFSPSAEGWSLG TGAQPPLXXXXXXXXXXXXXXXXXXXXXXXRSTGGIGWA GASNAEMELIPLGRSSS KAVGTGRKSFLFSDEEQRAMEDVSGGGGKAAKGKPT I AARKKVKKKLGAGIKPKVATVFTDEGQA AARK
Sbjct: 1 MAAMLFSDAGGKEGNMWGDNSANSNGGVCSEKNGAGSPTGNGVPAAGAFATCHACTTARVSRSVTCQGCEKTFHWTCMGFYEHKYQRPGPNWRCKDCKTAEAGGG-EAASPAALATQAVQLRESGEAIDVDD---SLATPPETVRLVAAVPTATVTSSAAVASPSAXXXAATPPVELAAPTTPTVPSSTGEHMCPVCKKGLGRKRTMDCSMCRTPSHAGCVNVRGAETPKSWVCRDCKPRAQATAGGYPGDGAQAKAATLLVAAQT-----------------------------------SISPIVSTATLASRRDESASRGASGSDSVGVPGEDLPDFEGSGEETDSDQDRRSPRSSAAAKVAETAAKELVATAKLEALMSQRDKVMGGMGVATAAASGKEGRERGGSTSAGSGEAAERGEGEDHGRDAPAEGVEGSSPSPSRSQRKGAAXXXXXXXXXXXXXXXXXPVPXLPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLPSAGPPVSVKQHVVGDAGLEXXXXXXXXXXXXXXX----STASTPSSHGVQFSSTASTVPGAEPFSPSAEGWSLGRTGAQPPLXXXXXXXXXXXXXXXXXXXXXXXRSTGGIGWAAGASNAEMELIPLGRSSSSXXXXXXXXXXXXXXXXXKAVGTGRKSFLFSDEEQRAMEDVSGGGGKAAKGKPTTILAARKKVKKKLGAGIKPKVATVFTDEGQAAAARK 694 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1008.110.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90) Total hits: 3 ZOOMx 1POSITION0
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig1008.110.1 >prot_E-siliculosus-1a_F_contig1008.110.1 ID=prot_E-siliculosus-1a_F_contig1008.110.1|Name=mRNA_E-siliculosus-1a_F_contig1008.110.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=3730bp MAAMLFSDAGGKEGNMWGDNSANSNGGVSSERNGAGSPTGNGVPAAGAFAback to top mRNA from alignment at E-siliculosus-1a_F_contig1008:17977..32145- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_F_contig1008.110.1 ID=mRNA_E-siliculosus-1a_F_contig1008.110.1|Name=mRNA_E-siliculosus-1a_F_contig1008.110.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=14169bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1008:17977..32145- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig1008:17977..32145- >mRNA_E-siliculosus-1a_F_contig1008.110.1 ID=mRNA_E-siliculosus-1a_F_contig1008.110.1|Name=mRNA_E-siliculosus-1a_F_contig1008.110.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=22380bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1008:17977..32145- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top |