prot_E-siliculosus-1a_F_contig1.10.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig1.10.1
Unique Nameprot_E-siliculosus-1a_F_contig1.10.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length111
Homology
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BLAST of mRNA_E-siliculosus-1a_F_contig1.10.1 vs. uniprot
Match: D7G6Y5_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G6Y5_ECTSI)

HSP 1 Score: 182 bits (463), Expect = 7.490e-58
Identity = 106/110 (96.36%), Postives = 107/110 (97.27%), Query Frame = 0 
Query:    1 MVRTAFVSVVALSASANAFLAPVPGYSLARTSRASAPIQMVTSATPAVSTSGGNMVSNEDTYTAALKKMEAESLAELEKAFEETAKKAKAESDKIWGDLEAEFAQDVDEA 110
            MVRTAFVSVVALSASANAFLAPVPGYSLARTSRASAPIQMVTSATPAVST  G MVSNE+TYTAALKKMEAESLAELEKAFEETAKKAKAESDKIWGDLEAEFAQDVDEA
Sbjct:    1 MVRTAFVSVVALSASANAFLAPVPGYSLARTSRASAPIQMVTSATPAVSTGEGKMVSNEETYTAALKKMEAESLAELEKAFEETAKKAKAESDKIWGDLEAEFAQDVDEA 110
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1.10.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G6Y5_ECTSI7.490e-5896.36Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 71..94
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 13..20
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..20
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 21..110
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 4..12
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..3
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..18
score: 0.553

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig1contigE-siliculosus-1a_F_contig1:93386..94775 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig1.10.1mRNA_E-siliculosus-1a_F_contig1.10.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig1 93386..94775 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig1.10.1 ID=prot_E-siliculosus-1a_F_contig1.10.1|Name=mRNA_E-siliculosus-1a_F_contig1.10.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=111bp
MVRTAFVSVVALSASANAFLAPVPGYSLARTSRASAPIQMVTSATPAVST
SGGNMVSNEDTYTAALKKMEAESLAELEKAFEETAKKAKAESDKIWGDLE
AEFAQDVDEA*
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