Homology
BLAST of mRNA_E-siliculosus-1a_F_contig10065.103.1 vs. uniprot
Match:
D8LFI6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFI6_ECTSI)
HSP 1 Score: 215 bits (548), Expect = 9.220e-63
Identity = 105/106 (99.06%), Postives = 106/106 (100.00%), Query Frame = 1
Query: 1 EGKLIIKCMMECYRAHPGQVAMLLDMATVFLYPTPVDFTFLKDFYRFEVPALAGVSEKRALFRVFLETLRDPNLTGEHKVKCLSLVVIPVLTTTLEDPHTNNAEVV 318
EGKLIIKCMMECYRAHPGQVAMLLDMATVFLYPTPVDFTFLKDFYRFEVPALAG+SEKRALFRVFLETLRDPNLTGEHKVKCLSLVVIPVLTTTLEDPHTNNAEVV
Sbjct: 2181 EGKLIIKCMMECYRAHPGQVAMLLDMATVFLYPTPVDFTFLKDFYRFEVPALAGISEKRALFRVFLETLRDPNLTGEHKVKCLSLVVIPVLTTTLEDPHTNNAEVV 2286
BLAST of mRNA_E-siliculosus-1a_F_contig10065.103.1 vs. uniprot
Match:
A0A6H5KAF7_9PHAE (FAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAF7_9PHAE)
HSP 1 Score: 172 bits (437), Expect = 8.330e-48
Identity = 86/88 (97.73%), Postives = 87/88 (98.86%), Query Frame = 1
Query: 55 QVAMLLDMATVFLYPTPVDFTFLKDFYRFEVPALAGVSEKRALFRVFLETLRDPNLTGEHKVKCLSLVVIPVLTTTLEDPHTNNAEVV 318
+VAMLLDMATVFLYPTPVDFTFLKDFYRFEVPAL GVSEKRALFRVFLETLRDPNLTGEHKVKCLSLVVIPVLTTTLEDPHTNNAEVV
Sbjct: 1168 EVAMLLDMATVFLYPTPVDFTFLKDFYRFEVPALTGVSEKRALFRVFLETLRDPNLTGEHKVKCLSLVVIPVLTTTLEDPHTNNAEVV 1255
BLAST of mRNA_E-siliculosus-1a_F_contig10065.103.1 vs. uniprot
Match:
G4YH99_PHYSP (Uncharacterized protein n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4YH99_PHYSP)
HSP 1 Score: 106 bits (264), Expect = 1.800e-24
Identity = 53/105 (50.48%), Postives = 72/105 (68.57%), Query Frame = 1
Query: 1 EGKLIIKCMMECYRAHPGQVAMLLDMATVFLYPTPVDFTFLKDFYRFEVPALAGVSEKRALFRVFLETLRDPNLTGEHKVKCLSLVVIPVLTTTLEDPHTNNAEV 315
E KL+IKC++ RA P V +LLDM +VFL+ TP DF+FL+ FYR EV V+ KR L R+FL LR+P + E KV + L+++PVLTT+ EDP+ NN +V
Sbjct: 2141 ESKLLIKCLITYSRAKPEDVQVLLDMVSVFLHRTPFDFSFLQTFYREEVATKYSVANKRNLIRLFLRMLREPGASEELKVHAVQLLIMPVLTTSFEDPNVNNIDV 2245
BLAST of mRNA_E-siliculosus-1a_F_contig10065.103.1 vs. uniprot
Match:
A0A397ESV8_9STRA (Uncharacterized protein (Fragment) n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397ESV8_9STRA)
HSP 1 Score: 105 bits (262), Expect = 3.230e-24
Identity = 50/105 (47.62%), Postives = 72/105 (68.57%), Query Frame = 1
Query: 1 EGKLIIKCMMECYRAHPGQVAMLLDMATVFLYPTPVDFTFLKDFYRFEVPALAGVSEKRALFRVFLETLRDPNLTGEHKVKCLSLVVIPVLTTTLEDPHTNNAEV 315
E KL++KC+++ RA+P V +LLDM TVFL+ T DF+FL+ FYR EV + KRA+ +FL LRD + + KV + L+++P+L T+ EDPHTNNA+V
Sbjct: 674 ESKLLVKCLIQYCRANPDDVQVLLDMLTVFLHHTSFDFSFLRAFYRDEVACRYSTANKRAIIHLFLRMLRDTTASEDLKVHAIQLLIMPLLNTSFEDPHTNNADV 778
BLAST of mRNA_E-siliculosus-1a_F_contig10065.103.1 vs. uniprot
Match:
A0A6A5AX95_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A5AX95_9STRA)
HSP 1 Score: 105 bits (262), Expect = 3.300e-24
Identity = 50/105 (47.62%), Postives = 72/105 (68.57%), Query Frame = 1
Query: 1 EGKLIIKCMMECYRAHPGQVAMLLDMATVFLYPTPVDFTFLKDFYRFEVPALAGVSEKRALFRVFLETLRDPNLTGEHKVKCLSLVVIPVLTTTLEDPHTNNAEV 315
E KL++KC+++ RA+P V +LLDM TVFL+ T DF+FL+ FYR EV + KRA+ +FL LRD + + KV + L+++P+L T+ EDPHTNNA+V
Sbjct: 842 ESKLLVKCLIQYCRANPDDVQVLLDMLTVFLHHTSFDFSFLRAFYRDEVACRYSTANKRAIIHLFLRMLRDTTASEDLKVHAIQLLIMPLLNTSFEDPHTNNADV 946
BLAST of mRNA_E-siliculosus-1a_F_contig10065.103.1 vs. uniprot
Match:
A0A418C387_9STRA (Uncharacterized protein (Fragment) n=3 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A418C387_9STRA)
HSP 1 Score: 105 bits (262), Expect = 3.340e-24
Identity = 50/105 (47.62%), Postives = 72/105 (68.57%), Query Frame = 1
Query: 1 EGKLIIKCMMECYRAHPGQVAMLLDMATVFLYPTPVDFTFLKDFYRFEVPALAGVSEKRALFRVFLETLRDPNLTGEHKVKCLSLVVIPVLTTTLEDPHTNNAEV 315
E KL++KC+++ RA+P V +LLDM TVFL+ T DF+FL+ FYR EV + KRA+ +FL LRD + + KV + L+++P+L T+ EDPHTNNA+V
Sbjct: 2179 ESKLLVKCLIQYCRANPDDVQVLLDMLTVFLHHTSFDFSFLRAFYRDEVACRYSTANKRAIIHLFLRMLRDTTASEDLKVHAIQLLIMPLLNTSFEDPHTNNADV 2283
BLAST of mRNA_E-siliculosus-1a_F_contig10065.103.1 vs. uniprot
Match:
A0A397DAI0_9STRA (Uncharacterized protein (Fragment) n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397DAI0_9STRA)
HSP 1 Score: 105 bits (262), Expect = 3.350e-24
Identity = 50/105 (47.62%), Postives = 72/105 (68.57%), Query Frame = 1
Query: 1 EGKLIIKCMMECYRAHPGQVAMLLDMATVFLYPTPVDFTFLKDFYRFEVPALAGVSEKRALFRVFLETLRDPNLTGEHKVKCLSLVVIPVLTTTLEDPHTNNAEV 315
E KL++KC+++ RA+P V +LLDM TVFL+ T DF+FL+ FYR EV + KRA+ +FL LRD + + KV + L+++P+L T+ EDPHTNNA+V
Sbjct: 2200 ESKLLVKCLIQYCRANPDDVQVLLDMLTVFLHHTSFDFSFLRAFYRDEVACRYSTANKRAIIHLFLRMLRDTTASEDLKVHAIQLLIMPLLNTSFEDPHTNNADV 2304
BLAST of mRNA_E-siliculosus-1a_F_contig10065.103.1 vs. uniprot
Match:
A0A3R7BKN8_9STRA (Uncharacterized protein n=4 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A3R7BKN8_9STRA)
HSP 1 Score: 105 bits (262), Expect = 3.350e-24
Identity = 50/105 (47.62%), Postives = 72/105 (68.57%), Query Frame = 1
Query: 1 EGKLIIKCMMECYRAHPGQVAMLLDMATVFLYPTPVDFTFLKDFYRFEVPALAGVSEKRALFRVFLETLRDPNLTGEHKVKCLSLVVIPVLTTTLEDPHTNNAEV 315
E KL++KC+++ RA+P V +LLDM TVFL+ T DF+FL+ FYR EV + KRA+ +FL LRD + + KV + L+++P+L T+ EDPHTNNA+V
Sbjct: 2205 ESKLLVKCLIQYCRANPDDVQVLLDMLTVFLHHTSFDFSFLRAFYRDEVACRYSTANKRAIIHLFLRMLRDTTASEDLKVHAIQLLIMPLLNTSFEDPHTNNADV 2309
BLAST of mRNA_E-siliculosus-1a_F_contig10065.103.1 vs. uniprot
Match:
A0A329SZM8_9STRA (Uncharacterized protein n=2 Tax=Phytophthora TaxID=4783 RepID=A0A329SZM8_9STRA)
HSP 1 Score: 105 bits (261), Expect = 4.580e-24
Identity = 53/105 (50.48%), Postives = 71/105 (67.62%), Query Frame = 1
Query: 1 EGKLIIKCMMECYRAHPGQVAMLLDMATVFLYPTPVDFTFLKDFYRFEVPALAGVSEKRALFRVFLETLRDPNLTGEHKVKCLSLVVIPVLTTTLEDPHTNNAEV 315
E KL+IKCM+ RA P V +LLDM +VFL+ TP DF+FL+ FYR EV A + KR L R+FL LR+P + + KV + L+++PVLTT+ EDP NN +V
Sbjct: 2145 ESKLLIKCMITYSRAKPEDVQVLLDMVSVFLHRTPFDFSFLQTFYREEVAAKYSAANKRNLVRLFLRMLREPGASEDLKVHAVQLLIMPVLTTSFEDPSVNNIDV 2249
BLAST of mRNA_E-siliculosus-1a_F_contig10065.103.1 vs. uniprot
Match:
W4G9L1_9STRA (Uncharacterized protein n=3 Tax=Aphanomyces astaci TaxID=112090 RepID=W4G9L1_9STRA)
HSP 1 Score: 104 bits (260), Expect = 6.250e-24
Identity = 50/105 (47.62%), Postives = 72/105 (68.57%), Query Frame = 1
Query: 1 EGKLIIKCMMECYRAHPGQVAMLLDMATVFLYPTPVDFTFLKDFYRFEVPALAGVSEKRALFRVFLETLRDPNLTGEHKVKCLSLVVIPVLTTTLEDPHTNNAEV 315
E KL++KC+++ RA+P V +LLDM TVFL+ T DF+FL+ FYR EV + KRA+ +FL LRD + + KV + L+++P+L T+ EDPHTNNA+V
Sbjct: 2202 ESKLLVKCLIQYCRANPDDVQVLLDMLTVFLHHTSFDFSFLRAFYRDEVACRYSTANKRAIIHLFLRMLRDTAASEDLKVHAIQLLIMPLLNTSFEDPHTNNADV 2306
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig10065.103.1 vs. uniprot
Analysis Date: 2022-09-19 (
Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90 )
Total hits: 25
0 1 Expect = 9.22e-63 / Id = 99.06 Expect = 8.33e-48 / Id = 97.73 Expect = 1.80e-24 / Id = 50.48 Expect = 3.23e-24 / Id = 47.62 Expect = 3.30e-24 / Id = 47.62 Expect = 3.34e-24 / Id = 47.62 Expect = 3.35e-24 / Id = 47.62 Expect = 3.35e-24 / Id = 47.62 Expect = 4.58e-24 / Id = 50.48 Expect = 6.25e-24 / Id = 47.62 Sequence D8LFI6_ECTSI A0A6H5KAF7_9PHAE G4YH99_PHYSP A0A397ESV8_9STRA A0A6A5AX95_9STRA A0A418C387_9STRA A0A397DAI0_9STRA A0A3R7BKN8_9STRA A0A329SZM8_9STRA W4G9L1_9STRA Pages
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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name Value
Start 1 Stop 0 Cds size 294 Model size 318 Exons 2 Hectar predicted targeting category other localisation BRITE ko00000,ko00001,ko01001,ko03021,ko03036 Best eggNOG OG NA|NA|NA Best tax level Eukaryota COG Functional cat. BDLTU EggNOG OGs COG5032@1,KOG0889@2759 EggNOG free text desc. phosphatidylinositol kinase activity GOs GO:0000123,GO:0000166,GO:0003674,GO:0003712,GO:0003824,GO:0004402,GO:0004672,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0006139,GO:0006259,GO:0006281,GO:0006325,GO:0006464,GO:0006468,GO:0006473,GO:0006475,GO:0006725,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0006974,GO:0006996,GO:0008080,GO:0008144,GO:0008150,GO:0008152,GO:0009889,GO:0009987,GO:0010556,GO:0016043,GO:0016301,GO:0016310,GO:0016407,GO:0016410,GO:0016569,GO:0016570,GO:0016573,GO:0016740,GO:0016746,GO:0016747,GO:0016772,GO:0016773,GO:0017076,GO:0018193,GO:0018205,GO:0018393,GO:0018394,GO:0019219,GO:0019222,GO:0019538,GO:0030554,GO:0031248,GO:0031323,GO:0031326,GO:0031974,GO:0031981,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0033554,GO:0034212,GO:0034641,GO:0035267,GO:0035639,GO:0036094,GO:0036211,GO:0043167,GO:0043168,GO:0043170,GO:0043189,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043412,GO:0043543,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044451,GO:0044464,GO:0046483,GO:0050789,GO:0050794,GO:0050896,GO:0051171,GO:0051252,GO:0051276,GO:0051716,GO:0060255,GO:0061733,GO:0065007,GO:0070013,GO:0071704,GO:0071840,GO:0080090,GO:0090304,GO:0097159,GO:0097367,GO:0140096,GO:0140110,GO:1901265,GO:1901360,GO:1901363,GO:1901564,GO:1902493,GO:1902494,GO:1902562,GO:1903506,GO:1990234,GO:2001141 KEGG Pathway ko05166,map05166 KEGG ko ko:K08874 Seed eggNOG ortholog 2880.D8LFI6 Seed ortholog evalue 2.5e-49 Seed ortholog score 201.1 Taxonomic scope Eukaryota
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Feature Name Unique Name Species Type Position
1622927511.356078-UTR-E-siliculosus-1a_F_contig10065:1024..1048 1622927511.356078-UTR-E-siliculosus-1a_F_contig10065:1024..1048 Ectocarpus siliculosus Ec863f_EcPH12_90f female UTR E-siliculosus-1a_F_contig10065 1025..1048 - 1696318559.8054464-UTR-E-siliculosus-1a_F_contig10065:1024..1048 1696318559.8054464-UTR-E-siliculosus-1a_F_contig10065:1024..1048 Ectocarpus siliculosus Ec863f_EcPH12_90f female UTR E-siliculosus-1a_F_contig10065 1025..1048 -
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig10065.103.1
>prot_E-siliculosus-1a_F_contig10065.103.1 ID=prot_E-siliculosus-1a_F_contig10065.103.1|Name=mRNA_E-siliculosus-1a_F_contig10065.103.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=98bp
MMECYRAHPGQVAMLLDMATVFLYPTPVDFTFLKDFYRFEVPALAGVSEK back to top mRNA from alignment at E-siliculosus-1a_F_contig10065:41..1048-
Legend: UTR polypeptide CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-siliculosus-1a_F_contig10065.103.1 ID=mRNA_E-siliculosus-1a_F_contig10065.103.1|Name=mRNA_E-siliculosus-1a_F_contig10065.103.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=1008bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig10065:41..1048- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)GAGGGCAAGCTGATCATCAAGTGC ATGATGGAGTGCTACCGGGCGCACCC
GGGGCAGGTGGCAATGCTGCTGGACATGGCGACGGTATTCCTCTACCCCA
CCCCGGTGGACTTCACTTTCCTTAAG GTCGGCAATATTCTCACTTTTTTT
GCAGATTGCCTTTTTTAATCACCGCTACCGAGAACATGGATTGGTGGTGT
TTCTTGAAGTTTGAGATGCGTGCTTGTCTGTTTTGTTGTTTCGCCTTTCG
TTTGACTAAGAATATATTATGAACGGAGCATTGCTGTTGTTCGCTTGAGA
CTGCTGTAGTCATGCGTGATATAACTATTGGATTGGATGAGGGCTTCTGC
CTGTTGAGAGGCTCTGCAGATGGCAGTGTTCTGTGCGGGTACTGGCTCGT
ATGTGATTGGCTCCCACTTTTACACAACCGTAGGTTTGTCGTATGTTTTT
TCATCACCTCCGCCAAGAGCATGTGTTGGTGGTGGTTTGGATGCGTGAGA
TTCTCCTGTATGTTTGTTTTCGTCCTCGTGATTTTTCCCTTTTTTTTTTA
GTTAAATTACTTGGTGGCAACGCACACATGGCGCCTGTACCCTTTCCTCG
CCCAACGGGCTCAACTTCCCCAAGGGTCGTTGTTTCACCTCCTACCCTCT
TCATCCTATCCAGGGATCCCCCCCGTTCTCTTCGACCCTGCCAATAAACA
GCAACCGGTCAGAGGGGCAAACGTCGCCCCCCGCCCTAGCCCTACGGATC
CTTCAGTTTTGTCACAAAACACTGCTATGTAAACGAAACCCCCGTAACCC
TACTCTCGATCTGCAGGATTTCTACCGGTTTGAGGTGCCGGCCCTAGCGG
GGGTCTCCGAGAAGCGCGCCCTGTTCCGCGTTTTCCTGGAAACCCTCCGC
GATCCCAACCTCACGGGGGAACACAAGGTCAAGTGCCTGTCTCTCGTCGT
GATTCCGGTCCTTACCACGACGCTTGAGGACCCGCACACCAACAACGCGG
AGGTGGTG back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig10065:41..1048-
>mRNA_E-siliculosus-1a_F_contig10065.103.1 ID=mRNA_E-siliculosus-1a_F_contig10065.103.1|Name=mRNA_E-siliculosus-1a_F_contig10065.103.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=588bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig10065:41..1048- (Ectocarpus siliculosus Ec863f_EcPH12_90f female) back to top