prot_E-siliculosus-1a_F_contig1131.869.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig1131.869.1
Unique Nameprot_E-siliculosus-1a_F_contig1131.869.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length159
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1131.869.1 vs. uniprot
Match: D7FXF0_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FXF0_ECTSI)

HSP 1 Score: 257 bits (657), Expect = 6.770e-86
Identity = 154/158 (97.47%), Postives = 155/158 (98.10%), Query Frame = 0
Query:    1 MSVADAAAIEVAAAAPVQASEGQEGDPVEPYFWEEGGNPNVDWWAKVRHSLHFGGVKAVAGAEAVGEVVANTLGLNDSKYQYVIDALEADEIREKXXXXXXEDRRQMALEEEAAKXXXXXXXXXGEVKQDSGAIELGDTRLSLPDSGGETALPEGSTA 158
            MSVADA AIEVAAAAPVQA +GQEGDPVEPYFWEEGGNPNVDWWAKVRHSLHFGGVKAVAGAEAVGEVVANTLGLNDSKYQYVIDALEADEIREKXXXXXXEDRRQMALEEEAAKXXXXXXXXXGEVKQDSGAIELGDTRLSLPDS GETALPEGSTA
Sbjct:    1 MSVADAPAIEVAAAAPVQAIDGQEGDPVEPYFWEEGGNPNVDWWAKVRHSLHFGGVKAVAGAEAVGEVVANTLGLNDSKYQYVIDALEADEIREKXXXXXXEDRRQMALEEEAAKXXXXXXXXXGEVKQDSGAIELGDTRLSLPDSSGETALPEGSTA 158          
BLAST of mRNA_E-siliculosus-1a_F_contig1131.869.1 vs. uniprot
Match: A0A5A8E207_CAFRO (Uncharacterized protein n=2 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8E207_CAFRO)

HSP 1 Score: 64.3 bits (155), Expect = 1.110e-9
Identity = 32/68 (47.06%), Postives = 46/68 (67.65%), Query Frame = 0
Query:   23 QEGDPVE--PYFWEEGGNPNVDWWAKVRHSLHFGGVKAVAGAEAVGEVVANTLGLNDSKYQYVIDALE 88
            ++GD  E  PY+WE GG+ +V     + H+LHF G  A+AG ++VG V+A+TLGL  S+YQ+ ID  E
Sbjct:   30 EDGDEEEEAPYYWEAGGDADVSTATALAHNLHFWGSLALAGVDSVGSVLASTLGLTQSRYQFEIDYAE 97          
BLAST of mRNA_E-siliculosus-1a_F_contig1131.869.1 vs. uniprot
Match: A0A7S2RVN4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RVN4_9STRA)

HSP 1 Score: 58.5 bits (140), Expect = 1.040e-7
Identity = 30/64 (46.88%), Postives = 40/64 (62.50%), Query Frame = 0
Query:   30 PYFWEEGGNPNVDWWAKVRHSLHFGGVKAVAGAEAVGEVVANTLGLNDSKYQYVIDALEADEIR 93
            PY+WE     +V  W K  H   + G +   G E VGEVVA+ LGLN+S+YQ+VIDA E ++ R
Sbjct:   51 PYYWELVDVQDVPAWQKAWHISRWTGERVFRGMEFVGEVVADILGLNESRYQWVIDAAENEKAR 114          
BLAST of mRNA_E-siliculosus-1a_F_contig1131.869.1 vs. uniprot
Match: A0A7S2NT86_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2NT86_9STRA)

HSP 1 Score: 57.4 bits (137), Expect = 3.110e-7
Identity = 31/61 (50.82%), Postives = 37/61 (60.66%), Query Frame = 0
Query:   31 YFWEEGGNPNVDWWAKVRHSLHFGGVKAVAGAEAVGEVVANTLGLNDSKYQYVIDALEADE 91
            YFWE G N ++ W  K+ H       K V  AEA GEVVANTLGLN S+Y YV D +  +E
Sbjct:   82 YFWETGNN-DLSWKVKLWHRTVAVLGKGVKNAEAAGEVVANTLGLNGSRYDYVYDTMTPEE 141          
BLAST of mRNA_E-siliculosus-1a_F_contig1131.869.1 vs. uniprot
Match: A0A7S2CUC7_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2CUC7_9STRA)

HSP 1 Score: 55.8 bits (133), Expect = 7.170e-7
Identity = 34/83 (40.96%), Postives = 47/83 (56.63%), Query Frame = 0
Query:   30 PYFWE-EGGNPNVDWWAKVRHSLHFGGVKAVAGAEAVGEVVANTLGLNDSKYQYVIDALEADEIREKXXXXXXEDRRQMALEE 111
            PY+W+  G NP +    K  H   + G K   G E +G +VA+  G+N SKYQYVIDA++ DE RE+       +R  +A EE
Sbjct:   43 PYYWQLVGYNPPLH--RKASHIAWWFGSKVFYGMEFIGAIVADLAGMNQSKYQYVIDAMKEDERREQRKKRIESERAMLAEEE 123          
BLAST of mRNA_E-siliculosus-1a_F_contig1131.869.1 vs. uniprot
Match: A0A7S2V0M7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V0M7_9STRA)

HSP 1 Score: 55.8 bits (133), Expect = 8.520e-7
Identity = 29/63 (46.03%), Postives = 40/63 (63.49%), Query Frame = 0
Query:   30 PYFWEEGGNPN--VDWWAKVRHSLHFGGVKAVAGAEAVGEVVANTLGLNDSKYQYVIDALEAD 90
            PY+WEE  + +  +    +V H+ ++   K V G E  GE VA+ LGLN S+YQYVIDA+E D
Sbjct:   49 PYYWEEPSSTDNPLPLGRRVFHNFYWAAEKIVDGMEFAGECVAHMLGLNQSQYQYVIDAMEID 111          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1131.869.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
D7FXF0_ECTSI6.770e-8697.47Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A5A8E207_CAFRO1.110e-947.06Uncharacterized protein n=2 Tax=Cafeteria roenberg... [more]
A0A7S2RVN4_9STRA1.040e-746.88Hypothetical protein (Fragment) n=1 Tax=Rhizochrom... [more]
A0A7S2NT86_9STRA3.110e-750.82Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]
A0A7S2CUC7_9STRA7.170e-740.96Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A7S2V0M7_9STRA8.520e-746.03Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 92..126
NoneNo IPR availablePANTHERPTHR31206:SF1coord: 39..132
IPR028260FAM177 familyPFAMPF14774FAM177coord: 40..101
e-value: 2.0E-7
score: 31.4
IPR028260FAM177 familyPANTHERPTHR31206FAMILY NOT NAMEDcoord: 39..132

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig1131contigE-siliculosus-1a_F_contig1131:23374..26495 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig1131.869.1mRNA_E-siliculosus-1a_F_contig1131.869.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig1131 22596..27269 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig1131.869.1 ID=prot_E-siliculosus-1a_F_contig1131.869.1|Name=mRNA_E-siliculosus-1a_F_contig1131.869.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=159bp
MSVADAAAIEVAAAAPVQASEGQEGDPVEPYFWEEGGNPNVDWWAKVRHS
LHFGGVKAVAGAEAVGEVVANTLGLNDSKYQYVIDALEADEIREKREQRD
EEDRRQMALEEEAAKARERREQQDGEVKQDSGAIELGDTRLSLPDSGGET
ALPEGSTA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR028260FAM177