prot_E-siliculosus-1a_F_contig1003.86.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig1003.86.1
Unique Nameprot_E-siliculosus-1a_F_contig1003.86.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length877
Homology
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BLAST of mRNA_E-siliculosus-1a_F_contig1003.86.1 vs. uniprot
Match: D8LDS9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDS9_ECTSI)

HSP 1 Score: 1261 bits (3262), Expect = 0.000e+0
Identity = 706/877 (80.50%), Postives = 718/877 (81.87%), Query Frame = 0 
Query:    1 MGKGKPCASKTEGVCATDAATAYKQGLKLCGEGAYGRALCLFDRAIAFRVDCSHYFAARANCKQAMGKFVDAYHDYVSAIRLNASKCTXXXXXXXXXXXXXXXXXXXXXXXXXCELEPTVAVHHYQRASLLHHRLARPGQAEISYGECLANTGEFDSAMTLRCLHAKGACLFEEGRAEEAVADLSRAVEMSDPSPASLHYLAKALKAVGQEKRALTVLGEALKKWEHMAPAAQLGGGPSSDNTGRHEAFFDRGVIRLGRGDDAGALLDFNKAVELSNGGRGEYFVQRARARARVAMRSEGREEAMAGVEDIEKAMELESNNPEFLFTAGVLCSRMGEYERAMGHLQLLLRSFDKQEAACTSREKTETGNKDVASRAACEFENFTASIAVNGQQPEGFLLRGRSLAGLSRQGQFQRDQAHEQAIRDFTMALSILGSKTACGFRTKSL-GGADGCIRDDSVSQRKDEAKGDEKEIDARNTKPEQDSDTKGNRTNPDVMLSENCSPRVEHNRAGADPQEASPAETKQPESHGAEGRLEESREASCRRDSRSGEVGDGMGEGGSVVGACHYARALSLQQLGRHADAVTDFNVAISEGPVSWQRFWHRATCLVELGEAYRTSAARDLRACMSMAEKGEPPPEMRNFLFQVGLAYLRLGRFALALELFDRAWKEEVRLLEQRDTKTDGPTDLGQPSPVVSVDGQIEDASLHYHRGLCLVNAGDLDDAHDAFSLAIEGRNPRGPRRPNEWGLSCVEDVANVARSAYHRERGKVRQLLRDFDGARSDFTACLASLPGKPQSKMNNCVHAAIGSGSGSSQQAHTLFRRGWSNKALGNLEEAAADFEAARLLNPHLSVNYRNAFDTELVVVDDGKPFTQPPALFHSW 876
            MGKGK  ASKTEGVCATDAATAY QGLKLCGEGAYG+ALC FDRAIAFRVDCSHYFAARANCKQAMGKFVDAYHDYVSAIRLNASKCTXXXXXXXXXXXXXXXXXXXXXXXXXCELEPTVAVHHYQRASLLHHRLARPGQA ISYGECLANTGEFDSAMTLRCLHAKGACLFEEGRAEEAVADLSRAVEMSDPSPASL YLAKALKAVGQEKRALTVLGEALKKWEHMAPAAQLGGGPSSDNTGRHEAFFDRGVIRLG GDDAGALLDFNKAVELSNGGRGEYFVQRARARARVAMRSEGREEAMAGVEDIEKAMELESNNPEFLFTAGVLCSRMGEYERAMGHLQLLLRSFDKQEAA T REKTETGNKDVASRAACEFENFTASIAVNGQ+PEGFLLRGRSLAGLS         +HEQAIRDFT ALSILGSK+A   RT SL GGADGC RDDSVSQRKDEAKGDEKE+DARN KPEQD DTKGNRTNP+VMLSE CSPRVE+NRAG DP EASPAETK PESHG EG LEESREASCRRDSRSGEVGDGMGEGGSVVGACHYARALSLQQLGRHADAVTDF+VAISEGPVSWQRFWHRATCLV LGEAYR SA RDLRACMSMAEKGEPPPEMRNFLFQVGLAYLRLGRFALALELFD+AWKEEVRL EQRDTKT+GPTDLG                                                                                                                         SS QAHTLFRRGW+NKA+GNLEEAAADFEAARLLNPHLSVNYRNAFDTELVVVDDGKPFTQPPALFHSW
Sbjct:    1 MGKGKQGASKTEGVCATDAATAYNQGLKLCGEGAYGKALCSFDRAIAFRVDCSHYFAARANCKQAMGKFVDAYHDYVSAIRLNASKCTXXXXXXXXXXXXXXXXXXXXXXXXXCELEPTVAVHHYQRASLLHHRLARPGQAVISYGECLANTGEFDSAMTLRCLHAKGACLFEEGRAEEAVADLSRAVEMSDPSPASLQYLAKALKAVGQEKRALTVLGEALKKWEHMAPAAQLGGGPSSDNTGRHEAFFDRGVIRLGHGDDAGALLDFNKAVELSNGGRGEYFVQRARARARVAMRSEGREEAMAGVEDIEKAMELESNNPEFLFTAGVLCSRMGEYERAMGHLQLLLRSFDKQEAAST-REKTETGNKDVASRAACEFENFTASIAVNGQRPEGFLLRGRSLAGLS---------SHEQAIRDFTTALSILGSKSARSSRTTSLLGGADGCCRDDSVSQRKDEAKGDEKEVDARNAKPEQDGDTKGNRTNPEVMLSETCSPRVEYNRAGTDPHEASPAETKHPESHGDEGHLEESREASCRRDSRSGEVGDGMGEGGSVVGACHYARALSLQQLGRHADAVTDFDVAISEGPVSWQRFWHRATCLVGLGEAYRASAVRDLRACMSMAEKGEPPPEMRNFLFQVGLAYLRLGRFALALELFDQAWKEEVRLPEQRDTKTEGPTDLG-------------------------------------------------------------------------------------------------------------------------SSLQAHTLFRRGWANKAMGNLEEAAADFEAARLLNPHLSVNYRNAFDTELVVVDDGKPFTQPPALFHSW 746
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BLAST of mRNA_E-siliculosus-1a_F_contig1003.86.1 vs. uniprot
Match: A0A5D6XF25_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XF25_9STRA)

HSP 1 Score: 67.4 bits (163), Expect = 1.020e-7
Identity = 57/162 (35.19%), Postives = 75/162 (46.30%), Query Frame = 0 
Query:  703 LHYHRGLCLVNAGDLDDAHDAFSLAIEGRNPRGPRRPNEWGLSCVEDVANVARSA-YHRERGKVRQLLRDFDGARSDFTACLASLPGKPQSKMNNCVHAAIGSGSGSSQQAHTLFRRGWSNKALGNLEEAAADFEAARLLNP---HLSVNYRNAFDTELVVV 860
            + YH GL          A ++F+ A+E        R      S  E  A +A    Y  ER K  QL R +D A +DF+  LA  P       NN               AH  FRRG+++KA G+L  AAADFEAA++L+P    L VNY    DTE V++
Sbjct:  632 VFYHIGLSCALESRHMAAIESFTAALEHS------RALSAASSASERAALLAAQLRYVHERAKALQLERYYDEAVADFSFVLAHNP-------NN---------------AHACFRRGFAHKARGDLAAAAADFEAAKMLDPTNLQLVVNYHELRDTECVIL 765
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BLAST of mRNA_E-siliculosus-1a_F_contig1003.86.1 vs. uniprot
Match: A0A1W0A939_9STRA (Uncharacterized protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A939_9STRA)

HSP 1 Score: 61.6 bits (148), Expect = 6.500e-6
Identity = 47/163 (28.83%), Postives = 70/163 (42.94%), Query Frame = 0 
Query:  701 ASLHYHRGLCLVNAGDLDDAHDAFSLAIEGRNPRGPRRPNEWGLSCVEDVANVARSAYHRERGKVRQLLRDFDGARSDFTACLASLPGKPQSKMNNCVHAAIGSGSGSSQQAHTLFRRGWSNKALGNLEEAAADFEAARLLNPH---LSVNYRNAFDTELVVV 860
            + +HY  GL   +  D   A ++F+ AI                    D A+     Y+ ER KV QL   ++ A  DF   L+  P                        AH LFRRG++ KA+G   +AA D + A+ L+PH   L VN+++  DTE +V+
Sbjct:  748 SDIHYFLGLAQASLQDNISAIESFTNAI--------------------DTAHQLHINYYHERAKVLQLEHYYEEAIQDFNQVLSVNP----------------------TNAHALFRRGFAFKAIGKHVDAAQDLQKAKQLDPHDPLLMVNFKDLHDTECIVL 868
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1003.86.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D8LDS9_ECTSI0.000e+080.50Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A5D6XF25_9STRA1.020e-735.19Uncharacterized protein n=1 Tax=Pythium brassicum ... [more]
A0A1W0A939_9STRA6.500e-628.83Uncharacterized protein n=1 Tax=Thraustotheca clav... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019734Tetratricopeptide repeatSMARTSM00028tpr_5coord: 701..734
e-value: 130.0
score: 5.3
coord: 195..228
e-value: 130.0
score: 5.3
coord: 19..52
e-value: 450.0
score: 0.5
coord: 87..120
e-value: 3.1E-5
score: 33.4
coord: 756..789
e-value: 73.0
score: 7.4
coord: 322..355
e-value: 110.0
score: 5.9
coord: 562..595
e-value: 24.0
score: 11.5
coord: 638..671
e-value: 50.0
score: 8.8
coord: 53..86
e-value: 13.0
score: 13.8
coord: 246..279
e-value: 31.0
score: 10.6
coord: 812..845
e-value: 0.04
score: 23.1
coord: 161..194
e-value: 26.0
score: 11.3
IPR019734Tetratricopeptide repeatPFAMPF13181TPR_8coord: 94..119
e-value: 0.13
score: 12.5
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 322..355
score: 5.281
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 87..120
score: 8.703
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 812..845
score: 7.67
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 53..86
score: 5.133
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 161..194
score: 6.284
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 246..279
score: 6.52
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 701..734
score: 6.549
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 638..671
score: 7.7
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 240..374
e-value: 5.1E-10
score: 41.1
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 556..855
e-value: 4.3E-23
score: 83.8
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 134..235
e-value: 2.2E-8
score: 35.8
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 5..133
e-value: 8.1E-19
score: 69.8
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 20..349
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 129..230
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 243..406
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 635..853
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 564..668
NoneNo IPR availablePANTHERPTHR44858:SF1TETRATRICOPEPTIDE REPEAT PROTEIN 6coord: 288..610
coord: 33..144
NoneNo IPR availablePANTHERPTHR44858FAMILY NOT NAMEDcoord: 288..610
coord: 381..728
coord: 634..849
NoneNo IPR availablePANTHERPTHR44858:SF1TETRATRICOPEPTIDE REPEAT PROTEIN 6coord: 381..728
coord: 634..849
NoneNo IPR availablePANTHERPTHR44858FAMILY NOT NAMEDcoord: 33..144
IPR013026Tetratricopeptide repeat-containing domainPROSITEPS50293TPR_REGIONcoord: 638..671
score: 7.846
IPR013026Tetratricopeptide repeat-containing domainPROSITEPS50293TPR_REGIONcoord: 19..355
score: 18.928
IPR013026Tetratricopeptide repeat-containing domainPROSITEPS50293TPR_REGIONcoord: 812..845
score: 7.711
IPR013026Tetratricopeptide repeat-containing domainPROSITEPS50293TPR_REGIONcoord: 701..734
score: 6.869

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig1003contigE-siliculosus-1a_F_contig1003:20210..30466 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig1003.86.1mRNA_E-siliculosus-1a_F_contig1003.86.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig1003 20210..31290 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig1003.86.1 ID=prot_E-siliculosus-1a_F_contig1003.86.1|Name=mRNA_E-siliculosus-1a_F_contig1003.86.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=877bp
MGKGKPCASKTEGVCATDAATAYKQGLKLCGEGAYGRALCLFDRAIAFRV
DCSHYFAARANCKQAMGKFVDAYHDYVSAIRLNASKCTYFSCRGLCLLKM
GKLDAALDDFTKACELEPTVAVHHYQRASLLHHRLARPGQAEISYGECLA
NTGEFDSAMTLRCLHAKGACLFEEGRAEEAVADLSRAVEMSDPSPASLHY
LAKALKAVGQEKRALTVLGEALKKWEHMAPAAQLGGGPSSDNTGRHEAFF
DRGVIRLGRGDDAGALLDFNKAVELSNGGRGEYFVQRARARARVAMRSEG
REEAMAGVEDIEKAMELESNNPEFLFTAGVLCSRMGEYERAMGHLQLLLR
SFDKQEAACTSREKTETGNKDVASRAACEFENFTASIAVNGQQPEGFLLR
GRSLAGLSRQGQFQRDQAHEQAIRDFTMALSILGSKTACGFRTKSLGGAD
GCIRDDSVSQRKDEAKGDEKEIDARNTKPEQDSDTKGNRTNPDVMLSENC
SPRVEHNRAGADPQEASPAETKQPESHGAEGRLEESREASCRRDSRSGEV
GDGMGEGGSVVGACHYARALSLQQLGRHADAVTDFNVAISEGPVSWQRFW
HRATCLVELGEAYRTSAARDLRACMSMAEKGEPPPEMRNFLFQVGLAYLR
LGRFALALELFDRAWKEEVRLLEQRDTKTDGPTDLGQPSPVVSVDGQIED
ASLHYHRGLCLVNAGDLDDAHDAFSLAIEGRNPRGPRRPNEWGLSCVEDV
ANVARSAYHRERGKVRQLLRDFDGARSDFTACLASLPGKPQSKMNNCVHA
AIGSGSGSSQQAHTLFRRGWSNKALGNLEEAAADFEAARLLNPHLSVNYR
NAFDTELVVVDDGKPFTQPPALFHSW*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013026TPR-contain_dom
IPR011990TPR-like_helical_dom_sf
IPR019734TPR_repeat