mRNA_E-siliculosus-1a_F_contig1110.748.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-siliculosus-1a_F_contig1110.748.1
Unique NamemRNA_E-siliculosus-1a_F_contig1110.748.1
TypemRNA
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1110.748.1 vs. uniprot
Match: A0A6H5KCL5_9PHAE (GMC_OxRdtase_N domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KCL5_9PHAE)

HSP 1 Score: 1115 bits (2883), Expect = 0.000e+0
Identity = 557/580 (96.03%), Postives = 566/580 (97.59%), Query Frame = 3
Query:    3 DFHWEVMDHTKDEHQNALVAKALGGCGIHNAMLYVRGLESDFSKWDVEGFDYASAVETWKKNENYTGRGPLPEWHGRGGPIATSPPDFIDEVAPFFLDSCEGAGIRLTEDFNKPGGREGAGYYHFAVRDGVRDSAARAMLGDIVMGRDVRTNLDIVTGAHVSKVLIEDAQPVPTGSEDNDATVASLSEGKDGRTVPAATGVEFVLDGKVEQVNIAAPGSHGRSGSAVVVTAGALHTPKLLMTSGIGNKAELEAHGLGCIADVPELGKNLQDHASVGVMYMLGPDILKLMPSAYTVAQELERYKMGVLKAFDLNFPPGVTIGGVDSDDLTNGEQNAPSIFSSAGLSAGAFLKSPYESHPAGSNDSAPDIQLTVFPRVTEPHILALVNIRPSAQAPPMMLVTVSVLDPEGRCVVRLNEDDPHRGNPHIERDQREGEPDPLSELDAKKLAWGVGQVRRIAQTTPLLEELRGEVYPGPGVSGAADDTAGEDVDLVGWVKQHVYSNSHWCGTARMGKASDPKSVVNERMKVIGVDNLFVGDASVLPYIPNGNVHSTVVLVATKLASYLVADAATVRKGKTGDHRE 1742
            DFHWEVMDHTK+EHQNALVAKALGGCGIHNAMLYVRGLESDF+KWDVEGFDYASAVETWK NENYTG  PLPEWHGRGG IATSPPDFIDEVAPFF+DSCEGAGI+LTEDFNKPGGREGAGYYHFAVRDGVRDSAARAMLGDIVMGRDVRTNLDIVTGAHVSKVLIEDAQPVPT SED+D TVAS  EGK GRTVPAATGVEFVLDGKVEQVNIAAPGSHGR+GSAVVVTAGAL TPKLLMTSGIG+KAELE HGLGCIA+VPELGKNLQDHASVGVMYMLGPDILKLMPSAYTVAQELERYKMGVLKAFDL FPPGVTIGGVDSDDLTNGEQNAPSIFSSAGLSAGAFLKSPYESHPAGSNDSAPDIQLTVFPRVTEPHILAL NIRPSAQAPPMMLVTVSVLDPEGRCVVRLNEDDPHRGNPHIERDQREGEPDPLSELDAKKLAWGVGQVRRIAQT+PLLEELRGEVYPGPGVSGAADDTAGEDVDLVGWVKQHVYSNSHWCGTARMGKASDPKSVVNERMKVIGVDNLFVGDASVLPYIPNGNVHSTVVLVATKLASYLVADAATVRKGK GDHRE
Sbjct:  100 DFHWEVMDHTKEEHQNALVAKALGGCGIHNAMLYVRGLESDFAKWDVEGFDYASAVETWKMNENYTGPEPLPEWHGRGGLIATSPPDFIDEVAPFFVDSCEGAGIKLTEDFNKPGGREGAGYYHFAVRDGVRDSAARAMLGDIVMGRDVRTNLDIVTGAHVSKVLIEDAQPVPTESEDDDDTVASRLEGKGGRTVPAATGVEFVLDGKVEQVNIAAPGSHGRAGSAVVVTAGALLTPKLLMTSGIGDKAELEGHGLGCIANVPELGKNLQDHASVGVMYMLGPDILKLMPSAYTVAQELERYKMGVLKAFDLGFPPGVTIGGVDSDDLTNGEQNAPSIFSSAGLSAGAFLKSPYESHPAGSNDSAPDIQLTVFPRVTEPHILALANIRPSAQAPPMMLVTVSVLDPEGRCVVRLNEDDPHRGNPHIERDQREGEPDPLSELDAKKLAWGVGQVRRIAQTSPLLEELRGEVYPGPGVSGAADDTAGEDVDLVGWVKQHVYSNSHWCGTARMGKASDPKSVVNERMKVIGVDNLFVGDASVLPYIPNGNVHSTVVLVATKLASYLVADAATVRKGKIGDHRE 679          
BLAST of mRNA_E-siliculosus-1a_F_contig1110.748.1 vs. uniprot
Match: A0A835YLF3_9STRA (Choline dehydrogenase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YLF3_9STRA)

HSP 1 Score: 421 bits (1081), Expect = 3.010e-131
Identity = 263/637 (41.29%), Postives = 353/637 (55.42%), Query Frame = 3
Query:    3 DFHWEVMDHTKDEHQNALVAKALGG---------------------CGIHNAMLYVRGLESDFSKWDVEGFDYASAVETWKKNENYT---GRG---------------------------------------PLPEWHGRGGPIATSPPDFIDEVAPFFLDSCEGAGIRLTEDFNKPGGREGAGYYHFAVRDGVRDSAARAMLGDIVMGRDVRTNLDIVTGAHVSKVLIEDAQPVPTGSEDNDATVASLSEGKDGRTVPAATGVEFVLDGKVEQVNIAAPGSHGRSGSAVVVTAGALHTPKLLMTSGIGNKAELEAHGLGCIADVPELGKNLQDHASVGVMYMLGPDILKLMPSAYTVAQELERYKMGVLKAFDLNFPPGVTIGGV--DSDDLTNGEQNAP-SIFSSAGLSAGAFLKSPYESHPAGSNDSAPDIQLTVFPRVTEPHILALVNIRPSAQAPPMMLVTVSVLDPEGRCVVRLNEDDPHRGNPHIERDQREGEP--DPLSELDAKKLAWGVGQVRRIAQTTPLLEELRGEVYPGPGVSGAADDTAGEDVDLVGWVKQHVYSNSHWCGTARM--GKASDPKSVVNERMKVIGVDNLFVGDASVLPYIPNGNVHSTVVLVATKLASYLVADA 1703
            ++HW V+D T+    NALVAKALGG                     CGIHNAMLYVR ++ DF  W V+G+ +  A+E +K   + +   G G                                       P P+WHG  GPI  SPP ++DEVA FF++SC   G+ + +DFN+PG REGAG Y FA+R+GVRDSAARA+LG I+ G+  R NL I++ A VS++L+E            D T                                            +VV+ GAL TP+LLM SGIG+   L   G+ C+ADVP +G+NLQDH  VG+M+  G  +L+  PSAY +A ELE+YK+ V++A +++FPPGVT+ GV   +D       ++P  +F+S G +AGAFL S        SN + PDIQLTVFP+VTEPHI  L + RP  Q  P +L+T+++L PEGR  V L+ + P    P I      G+P    L+ELD  ++AW VG+VR I +  PL +     V PG      +DD A     L  WV++H+YSNSHWCGTARM  G A DP +VV+ER++V GV +L V DASV+P IPNGNVHSTVVL+A++ A  L+ DA
Sbjct:  153 EYHWNVVDTTQRGEPNALVAKALGGEGGRGEGRXXXXXXXXXXXXXCGIHNAMLYVRAIKEDFDAWGVDGWTWEMALEHYKGATSVSAAAGAGIADEPCGCVARTERAPSQRLAMECYDTTAGGRIETQPPPPTPDWHGTAGPITNSPPLWVDEVAAFFIESCAYLGLPVVDDFNRPGAREGAGLYTFAIREGVRDSAARALLGPIISGKVPRPNLTILSKAEVSQILLE-----------ADTTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX----XXXXXXXXIVVSGGALMTPRLLMASGIGDARALADAGVACVADVPGVGRNLQDHPGVGLMFTAGHTLLERYPSAYKLALELEKYKLNVMRALEIDFPPGVTMAGVIDAADQEGTPVWSSPFGLFASTGQTAGAFLCSGL------SNTTVPDIQLTVFPQVTEPHIQVLNHTRPVNQESPAVLITIALLRPEGRKAVALDAEAPLSRPPRIV-----GDPALPVLTELDVARIAWAVGRVREIQRAPPLRDVTLRSVTPG-----LSDDMA--PAALRAWVREHIYSNSHWCGTARMANGDADDPLAVVDERLRVRGVRHLRVADASVIPVIPNGNVHSTVVLMASRGAELLLEDA 756          
BLAST of mRNA_E-siliculosus-1a_F_contig1110.748.1 vs. uniprot
Match: A0A4D9CPB5_9STRA (GMC_OxRdtase_N domain-containing protein n=4 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CPB5_9STRA)

HSP 1 Score: 371 bits (953), Expect = 1.280e-112
Identity = 235/609 (38.59%), Postives = 341/609 (55.99%), Query Frame = 3
Query:    3 DFHWEVMDHTKDEHQNALVAKALGGCGIHNAMLYVRGLESDFSKWDVE--GFDYASAVETWKKNENYTGRGPLPEWHGRGGPIATSPPDFIDEVAPFFLDSCEGAGIRLTEDFNKPGGREGAGYYHFAVRDGVRDSAARAMLGDIVMGRDVRTNLDIVTGAHVSKVLIEDAQPVPTGSEDNDATVASLSEGKDGRTVPAATGVEFVLDG-KVEQVNIAAPGSHGRSGSAVVVTAGALHTPKLLMTSGIGNKAELEAHGLGCIADVPELGKNLQDHASVGVMYMLGPDILKLMPSAYTVAQELERYKMGVLKAFDLNFPPGVTI--------------GGVDSDDLTNGEQNAPSIFSSAGLSAGAFLKSPYESHPAGSNDSAPDIQLTVFPRVTEPHILA----------------LVNIRPSAQAPPM-------MLVTVSVLDPEGRCVVRLNEDDPHRG-----NPHIERDQREGEPDPLSELDAKKLAWGVGQVRRIAQTTPLLEELRGEVYPGPGVSGAADDTAGEDVDLVGWVKQHVYSNSHWCGTARMGKASDPKSVVNERMKVIGVDNLFVGDASVLPYIPNGNVHSTVVLVATKLASYLV 1694
            D+HW+V        + A++AK LGGCG HNAMLYVR L  DF  W++   G+ + +A+      E++ G  P   +HG+GGPI ++PP ++D+VAP+FL++C   G+ +++DFN P GR GA YYHF +++GVR SAARA LG I+   D R+NLDIV  A V+ VL                    +S  KDG  V  ATGV F  +G    +  + +PG  G+    VV+TAGA+HTPK+LM SG+G + +LE  G+  + D+P +G+NLQDH SV + + L   +   + +A +  +EL  YK  V++  ++    G T               GG    D    +Q   +IF+S+G +AGAFLKS   S      ++ PD+QLTVFPR++EPH++                   N+  +   PP        MLVT+++LDP+ R  V L+  D   G       ++   + EG    LS++D  KL WGV  VR IA+T+P+ E  + E  PGP       D   E V L  WV+++ + NSHWCG+ +M K  DP  VV+ R+ V+GVD L V DASV P IP+GN HSTV++VA++ A +++
Sbjct:  189 DYHWDV--------EGAMIAKVLGGCGAHNAMLYVRSLPKDFEAWNLTDVGWTWEAALAEDMALEDFDG--PPSSYHGKGGPIRSAPPMYVDQVAPYFLEACRITGLPISDDFNAPNGRLGAAYYHFCIKNGVRMSAARAFLGPIM---DKRSNLDIVLKAEVTHVL--------------------MSGEKDG--VYTATGVSFAAEGGDSREARLKSPG-RGKGKGNVVLTAGAIHTPKILMNSGVGPRRKLEEAGIPVLVDLPGVGENLQDHPSVPMTFTLTTPLAGRVAAAGSF-EELTEYKDWVVEGGEILRAKGATSRADRAGGPGQQWGGGGFFPGDQPGSQQKDYTIFASSGFTAGAFLKSDKGSKNPAFKENYPDLQLTVFPRISEPHLVQKQQESEEAMDAGASPRAANLSSTPTLPPASKTQRGTMLVTIALLDPQARYSVELDPRDAMHGPARVLEANVSASEGEGF---LSDMDIGKLIWGVRNVRVIARTSPMTEAAQEETLPGP-------DLVDEGV-LKKWVRKNKFVNSHWCGSCKMTKEEDPMGVVDPRLHVMGVDGLRVADASVFPTIPSGNTHSTVLMVASRGAKFIL 749          
BLAST of mRNA_E-siliculosus-1a_F_contig1110.748.1 vs. uniprot
Match: M4BBH5_HYAAE (GMC_OxRdtase_N domain-containing protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BBH5_HYAAE)

HSP 1 Score: 303 bits (775), Expect = 3.460e-88
Identity = 211/586 (36.01%), Postives = 303/586 (51.71%), Query Frame = 3
Query:    6 FHWEVMDHTKDEH---QNALVAKALGGCGIHNAMLYVRGLESDFSKWDVEGFDYASAVETWKKNENYTGRGPLPEWHGRGGPIATSPPDFIDEVAPFFLDSCEGAGIRLTEDFNKPGGREGAGYYHFAVRDGVRDSAARAMLGDIV---MGRDVRTNLDIVTGAHVSKVLIEDAQPVPTGSEDNDATVASLSEGKDGRTVPAATGVEF-VLDGKVEQVNIAAPGSHGRSGSAVVVTAGALHTPKLLMTSGIGNKAELEAHGLGCIADVPELGKNLQDHASVGVMYMLGPDILKLMPSAYTVAQELERYKMGVLKAFDLNFPPGVTIGGVDSDDLTNGEQNAPSIFSSAGLSAGAFLKSPYESHPAGSNDSAPDIQLTVFPRVTEPHILALVNIRPSAQAPPMMLVTVSVLDP--EGRCVVRLNEDDPHRGN------PHIERDQREGEPDPLSELDAKKLAWGVGQVRRIAQTTPLLEELRGEVYPGPGVSGAADDTAGEDVDLVGWVKQHVYSNSHWCGTARMGKASDPKSVVNERMKVIGVDNLFVGDASVLPYIPNGNVHSTVVLVATKLASYLVADAATVRK 1718
            F+W ++ +T   H    +  VAKALGGCG+HNAMLYVR L SD  +WD+  + +  A+E +   E++ G  P   +HG  G   TSPP     ++  F+++C  AGI  T DFN PGGR GAGYYHF  RDG+R+SAA+  LG ++        R+N  ++    V+K+ I            N+  VA               GVE    +G  E + +A  G        V+VTAGA++TPK+LM SGIG+   LE  GL     +P +G NLQDH  VG+ +   P           +  EL+ Y M                   ++ D T    ++  +F SAGLSAGAFL       P GS  + P+IQLT+FPR +EPHI     +  +     ++++TV++L P    R V+  +EDD    +      PH+  ++ EGE + L   D  K++W +G VR I         +  E+ PG G+S      +GED+D   WV    + NSHW G+A M    + + VV+  ++V GV +L V DASV+P IPNGNVHS+VV++A++ A  L  D A  R+
Sbjct:  124 FYWTIVVNTPPLHWPYPDVNVAKALGGCGVHNAMLYVRVLPSDLERWDITNWTWEKALEIYTSIEDFDG--PNTSYHGTRGFFRTSPPAVKTNLSHEFIEACVQAGIPRTMDFNAPGGRHGAGYYHFNTRDGIRESAAKTFLGPMLDNNTAESTRSNFRLMLDTMVTKINI------------NEQNVAE--------------GVEVRYANGTAEVIRLAELGE-------VIVTAGAINTPKILMLSGIGDYVTLEKAGLPTKKHLPWVGMNLQDHPVVGMSFKYDPK------EEVDLEAELDAYFMAT-----------------NARDTT---ASSYGLFGSAGLSAGAFLT------PPGS--TVPEIQLTLFPRKSEPHICTTATLNHAT----VVVITVALLHPLARNRVVLIHDEDDSVDDDYVDHLVPHVVSEESEGEAEHLRPGDVWKISWAIGVVRNITSKLAERNVIGHEIAPGVGIS------SGEDLDR--WVLSAAFRNSHWVGSASMANTEE-EGVVDNHLRVFGVQHLRVADASVMPLIPNGNVHSSVVMIASRAAQILREDEAEYRR 627          
BLAST of mRNA_E-siliculosus-1a_F_contig1110.748.1 vs. uniprot
Match: A0A8K1FKT7_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FKT7_PYTOL)

HSP 1 Score: 301 bits (772), Expect = 7.090e-88
Identity = 205/569 (36.03%), Postives = 295/569 (51.85%), Query Frame = 3
Query:    6 FHWEVMDHTKDEH---QNALVAKALGGCGIHNAMLYVRGLESDFSKWDVEGFDYASAVETWKKNENYTGRGPLPEWHGRGGPIATSPPDFIDEVAPFFLDSCEGAGIRLTEDFNKPGGREGAGYYHFAVRDGVRDSAARAMLGDIVMGRDVRTNLDIVTGAHVSKVLIEDAQPVPTGSEDNDATVASLSEGKDGRTVPAATGVEFV-LDGKVEQVNIAAPGSHGRSGSAVVVTAGALHTPKLLMTSGIGNKAELEAHGLGCIADVPELGKNLQDHASVGVMYMLGPDILKLMPSAYTVAQELERYKMGVLKAFDLNFPPGVTIGGVDSDDLTNGEQNAPSIFSSAGLSAGAFLKSPYESHPAGSNDSAPDIQLTVFPRVTEPHILALVNIRPSAQAPPMMLVTVSVLDPEGRCVVRLNEDDPHRGNPHIERDQREGEPDPLSELDAKKLAWGVGQVRRIAQTTPLLEELRGEVYPGPGVSGAADDTAGEDVDLVGWVKQHVYSNSHWCGTARMGKASDPKSVVNERMKVIGVDNLFVGDASVLPYIPNGNVHSTVVLVATKLASYLVAD 1700
            FHW  + +T+  H    +  VAKALGGCGIHNAMLYVR L SDF +WD+  + +  A+E +   E++ G  P  ++HG+ G + TSPP FIDE++  F+ + E  GI  + DFN P GR G G+YHF  R GVR+SAAR  LG I+  +  R N  ++  + V K+++ +A                            A GVE   LDG  + + +A  G        V+VT GA++TPK+LM SG+G+  +L+A  +     +P +G NLQDH  + + +         M     +  EL  Y       F+      V +              +  +  SAG+SAGAFL  P          + P+IQLT FPR +EPH+     +  SA+    +L TV++L P+ R  V L+ ++     P I  +  E E + L + D  KL+WG+  VR IA        L  E+ PGP +    D        L  WV+ +V+ NSHW G+A MG + D K+VV+  ++V G+ NL V DASV+PYIPNGNVHS+V++VAT  A  +  D
Sbjct:  130 FHWSSVANTQVYHWDYPDVNVAKALGGCGIHNAMLYVRALPSDFHRWDMPKWTWQKALEIYLHMEDFDG--PESDYHGKNGTVRTSPPSFIDELSYEFVAASEHVGIPRSPDFNAPNGRFGVGFYHFNTRHGVRESAARRFLGPILEAK--RENFKLLLNSTVQKIVLNEA-------------------------ATKAEGVEIERLDGTRQTIRLAKRGQ-------VIVTGGAINTPKILMMSGLGHSGDLKALKIPVKRHLPRVGMNLQDHPVLAMAFSTP------MAREIDLHAELTSY-------FEATQEKHVNV-------------TSYGMMGSAGISAGAFLIPP--------GKTIPEIQLTFFPRKSEPHVWNSSELNHSAE----ILFTVALLHPKARNRVILSTENNVDYLPRIVSEVPEQEEEHLRDSDVWKLSWGITVVREIAAVLAQKGVLARELTPGPQIRAMED--------LNAWVRNNVFRNSHWVGSASMGPSPD-KAVVDNHLRVFGIPNLRVADASVIPYIPNGNVHSSVLMVATHAAELIKED 615          
BLAST of mRNA_E-siliculosus-1a_F_contig1110.748.1 vs. uniprot
Match: A0A2P4YUG4_9STRA (Choline dehydrogenase n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4YUG4_9STRA)

HSP 1 Score: 294 bits (752), Expect = 3.910e-85
Identity = 206/586 (35.15%), Postives = 305/586 (52.05%), Query Frame = 3
Query:    6 FHWEVMDHTKDEH---QNALVAKALGGCGIHNAMLYVRGLESDFSKWDVEGFDYASAVETWKKNENYTGRGPLPEWHGRGGPIATSPPDFIDEVAPFFLDSCEGAGIRLTEDFNKPGGREGAGYYHFAVRDGVRDSAARAMLGDIV---MGRDVRTNLDIVTGAHVSKVLIEDAQPVPTGSEDNDATVASLSEGKDGRTVPAATGVEFVLDGKVEQVNIAAPGSHGRSGSAVVVTAGALHTPKLLMTSGIGNKAELEAHGLGCIADVPELGKNLQDHASVGVMYMLGPDILKLMPSAYTVAQELERYKMGVLKAFDLNFPPGVTIGGVDSDDLTNGEQNAPSIFSSAGLSAGAFLKSPYESHPAGSNDSAPDIQLTVFPRVTEPHILALVNIRPSAQAPPMMLVTVSVLDPEGRCVVRLNEDDPHRGN---------PHIERDQREGEPDPLSELDAKKLAWGVGQVRRIAQTTPLLEELRGEVYPGPGVSGAADDTAGEDVDLVGWVKQHVYSNSHWCGTARMGKASDPKSVVNERMKVIGVDNLFVGDASVLPYIPNGNVHSTVVLVATKLASYLVADAATVRK 1718
            F+W  + +T   H    +  VAKALGGCGIHNAMLY+R L +D  +W ++ + +  A++ +   E++ G  P   +H   G + TSPP    +++  F+++C   GI  TEDFN P GR GAGYYHF  RDGVR+SAA+A LG I+     +  R+N  ++    V+K+ I D                +++EG + R            +G V+ + +A    HG     V+VTAGA++TPK+LM SG+GN+  L+  GL     +P +G NLQDH  VG+++          P    +  +L+ Y     KA         + G                +F SAGLSAGAFL       P GS  + P+IQLT+FPR +EPH+     +    Q    ++VT+++L P  R  V L  DD    +         P +  +  + +P+ L E D  K++W +G VR IA+     + +  E+ PG  V+ + D        L  WV  +V+ NSHW G+A MGK ++ + VV+  ++V GV NL V DASV+P IPNGNVHS+VV+VA + A  +  D A  R+
Sbjct:   97 FYWTNVANTPSLHWAYPDVNVAKALGGCGIHNAMLYIRALPTDMGRWKMDKWTWEKALDIYMSIEDFDG--PNSSYHSTRGFLRTSPPSLKLDISAEFIEACAELGIPRTEDFNAPDGRYGAGYYHFNTRDGVRESAAKAFLGPILDSDTAQSTRSNFRLMLDTTVTKIGINDE---------------NVTEGVEVR----------YGNGTVQLIRLA---EHGE----VIVTAGAINTPKILMLSGLGNRDTLKKAGLPLTKHLPRVGMNLQDHPVVGMIFECEA------PRIVDLKMDLDSY----FKATSTKHANASSFG----------------LFGSAGLSAGAFLI------PPGS--TIPEIQLTLFPRKSEPHMSNSAGLNHMTQ----VVVTIALLHPLARNRVVLVHDDRDSVDDNDIDNHLIPRVVSEVPDAKPEHLREGDVWKISWAMGVVREIAKNLAEKKVIGRELSPGADVASSKD--------LNNWVFNNVFRNSHWVGSASMGK-TEVEGVVDNHLRVFGVKNLRVADASVIPLIPNGNVHSSVVMVANRAAQIIREDQAKNRQ 601          
BLAST of mRNA_E-siliculosus-1a_F_contig1110.748.1 vs. uniprot
Match: A0A329SU49_9STRA (GMC_OxRdtase_N domain-containing protein n=2 Tax=Phytophthora TaxID=4783 RepID=A0A329SU49_9STRA)

HSP 1 Score: 293 bits (749), Expect = 1.810e-84
Identity = 213/585 (36.41%), Postives = 302/585 (51.62%), Query Frame = 3
Query:    6 FHWEVMDHTKDEH---QNALVAKALGGCGIHNAMLYVRGLESDFSKWDVEGFDYASAVETWKKNENYTGRGPLPEWHGRGGPIATSPPDFIDEVAPFFLDSCEGAGIRLTEDFNKPGGREGAGYYHFAVRDGVRDSAARAMLGDIV---MGRDVRTNLDIVTGAHVSKVLIEDAQPVPTGSEDNDATVASLSEGKDGRTVPAATGVEFVLDGKVEQVNIAAPGSHGRSGSAVVVTAGALHTPKLLMTSGIGNKAELEAHGLGCIADVPELGKNLQDHASVGVMYMLGPDILKLMPSAYTVAQELERYKMGVLKAFDLNFPPGVTIGGVDSDDLTNGEQNAPSIFSSAGLSAGAFLKSPYESHPAGSNDSAPDIQLTVFPRVTEPHILALVNIRPSAQAPPMMLVTVSVLDP--EGRCVVRLNEDDPHRGN-------PHIERDQREGEPDPLSELDAKKLAWGVGQVRRIAQTTPLLEELRGEVYPGPGVSGAADDTAGEDVDLVGWVKQHVYSNSHWCGTARMGKASDPKSVVNERMKVIGVDNLFVGDASVLPYIPNGNVHSTVVLVATKLASYLVADAATVR 1715
            F+W  + +T   H    +  VAKALGGCGIHNAMLYVR L SD  +W ++ + +  A++ +   E++ G  P   +H   G + TSPP    +V+  F+D+C   GI LT DFN P GR G GYYHF  RDGVR+SAA+A LG I+    G   R N  ++    V+K+ I+D                             A GVE       EQ+   A   HG     V+VTAGA++TPK+LM SG+GNK  L+  GL     +P +G NLQDH  VG+++          P +  +  +L+ Y     KA                   TN       +F SAG+SAGAFL       P G+  + P+IQLT+FPR +EPH+     +    +    ++VT+++L P    R V+  NEDD    N       P +  +  E +P+ L + D  K++W +G VR IA       +LR +   G  +S  AD  + +D+D   WV  +V+ NSHW G+A M  A++ + VV+  ++V G+ +L V DASV+P+IPNGNVHSTVV+VA + A  L  D A  R
Sbjct:  129 FYWTNVANTPSLHWAYPDVNVAKALGGCGIHNAMLYVRALPSDLERWKMKNWTWDKALDIYMGIEDFDG--PNSSYHSNRGFVRTSPPAMELDVSKEFVDACVELGIPLTADFNAPDGRYGVGYYHFNTRDGVRESAAKAFLGPILDSKTGESTRKNFRLMLDTTVTKIGIDDDS--------------------------VAEGVEVRYGNGTEQLIRLA--KHGE----VIVTAGAINTPKILMLSGLGNKDTLKKAGLPLKKHLPRVGMNLQDHPVVGMVFEYNA------PRSVDLKADLDSY----FKA-------------------TNASSFG--LFGSAGISAGAFLI------PPGA--TKPEIQLTLFPRKSEPHMSNSAGLDHMTE----VVVTIALLHPLARNRVVLIHNEDDSVDDNDIDDHLIPRVVSEVPETKPEHLRQGDVWKISWAIGVVREIAA------KLREKNVIGREISPGADIASSKDLD--NWVFDNVFRNSHWVGSASMA-ATENEGVVDNHLRVFGIQSLRVADASVIPFIPNGNVHSTVVMVANRAAQILREDEAEYR 627          
BLAST of mRNA_E-siliculosus-1a_F_contig1110.748.1 vs. uniprot
Match: H3GVB4_PHYRM (GMC_OxRdtase_N domain-containing protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GVB4_PHYRM)

HSP 1 Score: 293 bits (749), Expect = 2.260e-84
Identity = 208/589 (35.31%), Postives = 306/589 (51.95%), Query Frame = 3
Query:    6 FHWEVMDHTKDEH---QNALVAKALGGCGIHNAMLYVRGLESDFSKWDVEGFDYASAVETWKKNENYTGRGPLPEWHGRGGPIATSPPDFIDEVAPFFLDSCEGAGIRLTEDFNKPGGREGAGYYHFAVRDGVRDSAARAMLG---DIVMGRDVRTNLDIVTGAHVSKVLIEDAQPVPTGSEDNDATVASLSEGKDGRTVPAATGVEFVLDGKVEQVNIAAPGSHGRSGSAVVVTAGALHTPKLLMTSGIGNKAELEAHGLGCIADVPELGKNLQDHASVGVMYMLGPDILKLMPSAYTVAQELERYKMGVLKAFDLNFPPGVTIGGVDSDDLTNGEQNAPSIFSSAGLSAGAFLKSPYESHPAGSNDSAPDIQLTVFPRVTEPHI---LALVNIRPSAQAPPMMLVTVSVLDP--EGRCVVRLNEDDPHRGN-------PHIERDQREGEPDPLSELDAKKLAWGVGQVRRIAQTTPLLEELRGEVYPGPGVSGAADDTAGEDVDLVGWVKQHVYSNSHWCGTARMGKASDPKSVVNERMKVIGVDNLFVGDASVLPYIPNGNVHSTVVLVATKLASYLVADAATVRK 1718
            F+W  + +T   H    +  VAKALGGCGIHNAMLYVR L SD  +W ++G+ +   +E +   E+Y G  P   +H   G + TS P    + +  FL++CE  GI  T+DFN PGGR GAGYYHF  RDGVR+SAA+A LG   D    +  R+N  ++    V+++ I +                +++EG + R            +G V+ + +AA   HG     V+VTAGA++TPK+LM SG+GN+  L+  GL     +P +G NLQDH  VG+ +               +  +L+ Y     KA +   P   + G                +F +AG+S GAFL       P G+  + P+IQLT+FP+ +EPH+    AL ++         ++VT+++L P    R V+  ++DD    N       P I  +  E EP+ L E D  K++W +G VR I       + +  E+ PG G++ + D        L  WV   V+ NSHW G+A MGK+ D   VV++ ++V G+ NL V DAS++P IPNGNVHS+VV+VA + A  L  D A  R+
Sbjct:  128 FYWTNVANTPSLHWAYPDVNVAKALGGCGIHNAMLYVRALPSDLERWQMQGWTWERTLEIYMSIEDYDG--PNSSFHSTRGFVRTSKPAMKMDFSSDFLEACEELGIPRTDDFNAPGGRYGAGYYHFNTRDGVRESAAKAFLGPMLDSKTAQSTRSNFQLMLDTTVTRIRINEQ---------------NVTEGVEVR----------YGNGTVQLIRLAA---HGE----VIVTAGAINTPKILMLSGLGNRDTLKKAGLPLKKHLPRVGMNLQDHPVVGMTFECEA------ARVVDLQSDLDSY----FKATNAKHPNASSFG----------------LFGTAGISVGAFLI------PPGA--TLPEIQLTLFPKKSEPHMSNSAALDHVHE-------VVVTIALLHPLARNRVVLIHDDDDSVDDNDIDDHLIPRIVSEVPEFEPEHLREGDVWKISWAIGVVRDIMGKLAEKDLIGREIAPGIGITSSKD--------LDEWVLNSVFRNSHWVGSASMGKSEDD-GVVDDHLRVFGIKNLRVADASIIPLIPNGNVHSSVVMVANRAAEILREDEAEYRR 632          
BLAST of mRNA_E-siliculosus-1a_F_contig1110.748.1 vs. uniprot
Match: A0A6A3DYS6_9STRA (GMC_OxRdtase_N domain-containing protein n=3 Tax=Phytophthora TaxID=4783 RepID=A0A6A3DYS6_9STRA)

HSP 1 Score: 292 bits (748), Expect = 3.710e-84
Identity = 212/586 (36.18%), Postives = 302/586 (51.54%), Query Frame = 3
Query:    6 FHWEVMDHTKDEH---QNALVAKALGGCGIHNAMLYVRGLESDFSKWDVEGFDYASAVETWKKNENYTGRGPLPEWHGRGGPIATSPPDFIDEVAPFFLDSCEGAGIRLTEDFNKPGGREGAGYYHFAVRDGVRDSAARAMLG---DIVMGRDVRTNLDIVTGAHVSKVLIEDAQPVPTGSEDNDATVASLSEGKDGRTVPAATGVEFVLDGKVEQVNIAAPGSHGRSGSAVVVTAGALHTPKLLMTSGIGNKAELEAHGLGCIADVPELGKNLQDHASVGVMYMLGPDILKLMPSAYTVAQELERYKMGVLKAFDLNFPPGVTIGGVDSDDLTNGEQNAPSIFSSAGLSAGAFLKSPYESHPAGSNDSAPDIQLTVFPRVTEPHILALVNIRPSAQAPPMMLVTVSVLDP--EGRCVVRLNEDDPHRGN-------PHIERDQREGEPDPLSELDAKKLAWGVGQVRRIAQTTPLLEELRGEVYPGPGVSGAADDTAGEDVDLVGWVKQHVYSNSHWCGTARMGKASDPKSVVNERMKVIGVDNLFVGDASVLPYIPNGNVHSTVVLVATKLASYLVADAATVRK 1718
            F+W  + +T   H    +  VAKALGGCGIHNAMLYVR L SD  +W ++ + +  A++ + + E++ G  P   +H   G + TSP      ++  F+++CE  GI  T DFN PGGR GAGYYHF +RDGVR+SAA+A LG   D   G   ++N  ++    V+++ I D          N+ T                 GVE       EQ+   A   HG     V+VTAGA++TPK+LM SGIGN+  L   GL     +P +G NLQDH  VG+ +         +P A  +  EL+ Y         LN           S   TN       +F SAG+SAGAFL       P GS  + P+IQLT+FPR +EPH+     +    +    +++T+++L P    R V+  ++DD    N       P +  +  E +P+ L   D  K+ W +G VR IA      + +  E+ PG       D T+ +D+D   WV   V+ N+HW G+A MG + D ++VV+  ++V G+ NL V DASV+P IPNGNVHSTVV+VA + A  L  D A  R+
Sbjct:  135 FYWTNVANTPSLHWAYPDVNVAKALGGCGIHNAMLYVRALPSDLERWQMDKWTWEEALDIYMQIEDFDG--PNSSYHSTKGFVRTSPLAVESMLSNEFIEACEQLGIPRTTDFNAPGGRYGAGYYHFNIRDGVRESAAKAFLGPMLDSKTGESTKSNFRLMLDTTVTRIRIND----------NNVT----------------EGVEVRFRNGTEQLIRLA--EHGE----VIVTAGAINTPKVLMLSGIGNRDALRKVGLPLKKHLPRVGMNLQDHPVVGMTFECE------LPRAVDLKSELDSY---------LN---------AASSKHTNASSFG--LFGSAGISAGAFLI------PPGS--TLPEIQLTLFPRKSEPHMSNSAELNHVTE----VIITIALLHPLARNRVVLVHDDDDSVDDNDIDDHLIPRVVSEVPEAKPEHLRAGDVWKITWAIGVVREIAAKLAEKDLIGKEITPG------VDVTSSKDLDE--WVLNSVFRNTHWVGSASMGTSED-EAVVDNHLRVFGIKNLRVADASVIPRIPNGNVHSTVVMVANRAAQILREDEADYRR 639          
BLAST of mRNA_E-siliculosus-1a_F_contig1110.748.1 vs. uniprot
Match: A0A2D4CBF4_PYTIN (GMC_OxRdtase_N domain-containing protein (Fragment) n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CBF4_PYTIN)

HSP 1 Score: 297 bits (761), Expect = 5.800e-82
Identity = 209/571 (36.60%), Postives = 303/571 (53.06%), Query Frame = 3
Query:    6 FHWEVMDHTKDEH---QNALVAKALGGCGIHNAMLYVRGLESDFSKWDVEGFDYASAVETWKKNENYTGRGPLPEWHGRGGPIATSPPDFIDEVAPFFLDSCEGAGIRLTEDFNKPGGREGAGYYHFAVRDGVRDSAARAMLGDIVMGRDVRTNLDIVTGAHVSKVLIEDAQPVPTGSEDNDATVASLSEGKDGRTVPAATGVEFV-LDGKVEQVNIAAPGSHGRSGSAVVVTAGALHTPKLLMTSGIGNKAELEAHGLGCIADVPELGKNLQDHASVGVMYMLGPDILKLMPSAYTVAQELERYKMGVLKAFDLNFPPGVTIGGVDSDDLTNGEQNAPS--IFSSAGLSAGAFLKSPYESHPAGSNDSAPDIQLTVFPRVTEPHILALVNIRPSAQAPPMMLVTVSVLDPEGRCVVRLNEDDPHRGNPHIERDQREGEPDPLSELDAKKLAWGVGQVRRIAQTTPLLEELRGEVYPGPGVSGAADDTAGEDVDLVGWVKQHVYSNSHWCGTARMGKASDPKSVVNERMKVIGVDNLFVGDASVLPYIPNGNVHSTVVLVATKLASYLVAD 1700
            F+W  + +T   H    +  VAKALGGCGIHNAMLYVR L SD  +W +  + +  A+E +   E++ G  P  E+HG  G + TSPP   D ++  F+++ E  GI  T+DFN P GR G G+YHF  RDGVR+SAAR  +G ++  ++ R+N  ++    V+++  ++                       G T   ATGVE V  DG  + + ++A G+       V+VTAGA++TPK+LM SG+G+K +L+  GL  I  +P +G NLQDH  V V +   P+     P    +  EL  Y                          T  ++NA S  +  SAG+SAGAFL       P GS  + P+IQLT+FPR +EPH+     +  ++Q    +LVTV++L P+ R  V L +    +  P I  +  E E + L E D  KL+WGV  VR IA           E+ PG  VS   D        L+ W+   V+ NSHW G+A MG ++D  +VV+  ++V G+ N+ V DAS++P IPNGNVHS+V++VA+  A  + AD
Sbjct:   50 FYWTNVANTPALHWDYPDVNVAKALGGCGIHNAMLYVRALPSDLHRWGMSKWTWKKALELYTHMEDFDG--PSSEFHGDSGIVRTSPPSLADSLSLAFVEASEEIGIPRTDDFNAPHGRHGVGFYHFNTRDGVRESAARRFVGPML--KEGRSNFHLLLNTEVTRIQFDER----------------------GET---ATGVEVVHSDGTRQLIRVSAQGN-------VIVTAGAVNTPKVLMQSGVGHKDDLKQLGLPVIKHLPRVGMNLQDHPVVAVAFE-NPN-----PVPVDLNSELATYFAAT----------------------TRQDKNATSYGMMGSAGISAGAFLV------PPGS--TLPEIQLTLFPRKSEPHVSNSSELNHASQ----ILVTVALLHPKARNRVVLEKASNGQFIPRIVSEVPEREAEHLREDDVWKLSWGVAVVREIAAALARKGLFGAEITPGSSVSTMDD--------LIKWIPNAVFRNSHWVGSAAMGHSADT-AVVDNHLRVFGLTNVRVADASIIPSIPNGNVHSSVLMVASHGAQLIRAD 535          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1110.748.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KCL5_9PHAE0.000e+096.03GMC_OxRdtase_N domain-containing protein n=2 Tax=E... [more]
A0A835YLF3_9STRA3.010e-13141.29Choline dehydrogenase n=1 Tax=Tribonema minus TaxI... [more]
A0A4D9CPB5_9STRA1.280e-11238.59GMC_OxRdtase_N domain-containing protein n=4 Tax=M... [more]
M4BBH5_HYAAE3.460e-8836.01GMC_OxRdtase_N domain-containing protein n=1 Tax=H... [more]
A0A8K1FKT7_PYTOL7.090e-8836.03Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A2P4YUG4_9STRA3.910e-8535.15Choline dehydrogenase n=1 Tax=Phytophthora palmivo... [more]
A0A329SU49_9STRA1.810e-8436.41GMC_OxRdtase_N domain-containing protein n=2 Tax=P... [more]
H3GVB4_PHYRM2.260e-8435.31GMC_OxRdtase_N domain-containing protein n=1 Tax=P... [more]
A0A6A3DYS6_9STRA3.710e-8436.18GMC_OxRdtase_N domain-containing protein n=3 Tax=P... [more]
A0A2D4CBF4_PYTIN5.800e-8236.60GMC_OxRdtase_N domain-containing protein (Fragment... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig1110contigE-siliculosus-1a_F_contig1110:321..5673 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-19
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Properties
Property NameValue
Start1
Stop1
Cds size1725
Model size2645
Exons7
Ec32 orthologEc-14_002870.1
Ec32 ortholog descriptioncholine dehydrogenase
Hectar predicted targeting categoryother localisation
Best eggNOG OGNA|NA|NA
Best tax levelEukaryota
COG Functional cat.E
EggNOG OGsCOG2303@1,KOG1238@2759
EggNOG free text desc.flavin adenine dinucleotide binding
Seed eggNOG ortholog2880.D7G8F7
Seed ortholog evalue0.0
Seed ortholog score1105.5
Taxonomic scopeEukaryota
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927616.5330145-UTR-E-siliculosus-1a_F_contig1110:320..3401622927616.5330145-UTR-E-siliculosus-1a_F_contig1110:320..340Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig1110 321..340 +
1696318611.5003088-UTR-E-siliculosus-1a_F_contig1110:320..3401696318611.5003088-UTR-E-siliculosus-1a_F_contig1110:320..340Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig1110 321..340 +
1622927616.6353676-UTR-E-siliculosus-1a_F_contig1110:4773..56731622927616.6353676-UTR-E-siliculosus-1a_F_contig1110:4773..5673Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig1110 4774..5673 +
1696318611.5880942-UTR-E-siliculosus-1a_F_contig1110:4773..56731696318611.5880942-UTR-E-siliculosus-1a_F_contig1110:4773..5673Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig1110 4774..5673 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927616.5449452-CDS-E-siliculosus-1a_F_contig1110:340..5951622927616.5449452-CDS-E-siliculosus-1a_F_contig1110:340..595Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1110 341..595 +
1696318611.5120616-CDS-E-siliculosus-1a_F_contig1110:340..5951696318611.5120616-CDS-E-siliculosus-1a_F_contig1110:340..595Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1110 341..595 +
1622927616.557787-CDS-E-siliculosus-1a_F_contig1110:990..12301622927616.557787-CDS-E-siliculosus-1a_F_contig1110:990..1230Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1110 991..1230 +
1696318611.5216436-CDS-E-siliculosus-1a_F_contig1110:990..12301696318611.5216436-CDS-E-siliculosus-1a_F_contig1110:990..1230Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1110 991..1230 +
1622927616.5678067-CDS-E-siliculosus-1a_F_contig1110:1583..17841622927616.5678067-CDS-E-siliculosus-1a_F_contig1110:1583..1784Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1110 1584..1784 +
1696318611.53065-CDS-E-siliculosus-1a_F_contig1110:1583..17841696318611.53065-CDS-E-siliculosus-1a_F_contig1110:1583..1784Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1110 1584..1784 +
1622927616.5793602-CDS-E-siliculosus-1a_F_contig1110:2328..24241622927616.5793602-CDS-E-siliculosus-1a_F_contig1110:2328..2424Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1110 2329..2424 +
1696318611.53996-CDS-E-siliculosus-1a_F_contig1110:2328..24241696318611.53996-CDS-E-siliculosus-1a_F_contig1110:2328..2424Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1110 2329..2424 +
1622927616.5912282-CDS-E-siliculosus-1a_F_contig1110:2836..29501622927616.5912282-CDS-E-siliculosus-1a_F_contig1110:2836..2950Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1110 2837..2950 +
1696318611.5501053-CDS-E-siliculosus-1a_F_contig1110:2836..29501696318611.5501053-CDS-E-siliculosus-1a_F_contig1110:2836..2950Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1110 2837..2950 +
1622927616.6053627-CDS-E-siliculosus-1a_F_contig1110:3216..33991622927616.6053627-CDS-E-siliculosus-1a_F_contig1110:3216..3399Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1110 3217..3399 +
1696318611.5597365-CDS-E-siliculosus-1a_F_contig1110:3216..33991696318611.5597365-CDS-E-siliculosus-1a_F_contig1110:3216..3399Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1110 3217..3399 +
1622927616.6226294-CDS-E-siliculosus-1a_F_contig1110:4137..47731622927616.6226294-CDS-E-siliculosus-1a_F_contig1110:4137..4773Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1110 4138..4773 +
1696318611.5696228-CDS-E-siliculosus-1a_F_contig1110:4137..47731696318611.5696228-CDS-E-siliculosus-1a_F_contig1110:4137..4773Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1110 4138..4773 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig1110.748.1prot_E-siliculosus-1a_F_contig1110.748.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalepolypeptideE-siliculosus-1a_F_contig1110 341..4773 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-siliculosus-1a_F_contig1110.748.1

>prot_E-siliculosus-1a_F_contig1110.748.1 ID=prot_E-siliculosus-1a_F_contig1110.748.1|Name=mRNA_E-siliculosus-1a_F_contig1110.748.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=575bp
MDHTKDEHQNALVAKALGGCGIHNAMLYVRGLESDFSKWDVEGFDYASAV
ETWKKNENYTGRGPLPEWHGRGGPIATSPPDFIDEVAPFFLDSCEGAGIR
LTEDFNKPGGREGAGYYHFAVRDGVRDSAARAMLGDIVMGRDVRTNLDIV
TGAHVSKVLIEDAQPVPTGSEDNDATVASLSEGKDGRTVPAATGVEFVLD
GKVEQVNIAAPGSHGRSGSAVVVTAGALHTPKLLMTSGIGNKAELEAHGL
GCIADVPELGKNLQDHASVGVMYMLGPDILKLMPSAYTVAQELERYKMGV
LKAFDLNFPPGVTIGGVDSDDLTNGEQNAPSIFSSAGLSAGAFLKSPYES
HPAGSNDSAPDIQLTVFPRVTEPHILALVNIRPSAQAPPMMLVTVSVLDP
EGRCVVRLNEDDPHRGNPHIERDQREGEPDPLSELDAKKLAWGVGQVRRI
AQTTPLLEELRGEVYPGPGVSGAADDTAGEDVDLVGWVKQHVYSNSHWCG
TARMGKASDPKSVVNERMKVIGVDNLFVGDASVLPYIPNGNVHSTVVLVA
TKLASYLVADAATVRKGKTGDHRE*
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mRNA from alignment at E-siliculosus-1a_F_contig1110:321..5673+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-siliculosus-1a_F_contig1110.748.1 ID=mRNA_E-siliculosus-1a_F_contig1110.748.1|Name=mRNA_E-siliculosus-1a_F_contig1110.748.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=5353bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1110:321..5673+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
AGGATTTCCACTGGGAAGTAATGGACCACACCAAGGACGAGCACCAGAAC GCCCTCGTCGCGAAAGCTCTTGGTGGCTGCGGCATCCACAACGCCATGCT TTACGTCCGTGGCCTGGAGTCCGACTTCTCCAAGTGGGACGTAGAAGGGT TCGACTACGCCTCCGCGGTGGAAACCTGGAAAAAGAACGAGAACTACACG GGGCGGGGACCCCTTCCCGAGTGGCACGGACGAGGCGGGCCGATCGCGAC GTCACCCCCGGACTTTATAGATGAGGTGGGCCGCTGAGGACACGACGAGA CAGTGAAACGGCAGCATAGACGCAGAGATCCAGAAAGGTAGCAGGGGTCG ATTGAGACGTGGACCCGTTTCTGGCGCTAGCCTAGCTCATGTTGACGTAA TCTGTTTGCCATTTGGATGTTGACCGGAGTGGAAGAACGGCAGCAGACCA GACAGGCTAGCTCAAGCTAAAGGGCTACTGCCGTACTACGTGATGGGAGG ATTCGGGGGCTTGCCGTGTCCAATGTGCCGTCAACACAAACGCACGCCAT ATGTGGAACCTTGGGTGGTACGACGCCCGTCTCTGGGGGAGTTTTTCTCC GACCCAACCCCTAAGTTTTGCTTTCACGACGTTTCTGCATCATTCTGCGA ACACGTTTGTAATTCAACAGGTGGCCCCCTTTTTTTTGGACAGCTGCGAA GGGGCGGGTATCAGGTTGACCGAGGATTTCAACAAGCCTGGAGGACGGGA AGGAGCGGGATATTACCATTTTGCTGTCCGAGATGGAGTGCGAGATAGCG CAGCGAGGGCCATGCTAGGCGACATCGTGATGGGCAGGGACGTCCGCACG AACCTTGACATTGTGACGGGAGCTCACGTCAGCAAGGTGTTGATCGAGGA TGCTCAACCGGTGAGACGACGCACCGTGTTTTCAAAAGCGAAGTTACCCG GTCATGGACAAAACGCTCCGTCACACTTAGCGGGCAAACTATCGTCTCAC TTTTGCCGCCCACCGTAACAATATGGTAGTCAGGGGTCGACAAGCGTGAA CCGCAGATGCACGGGTTCCTCGCAAGGGCTTTGCTGTCCGTCTTTTGGAA GCCAGGAGCGCCATAACGCCGACGGCGGGCTTCAGTCCTGCCATTAGCCG AACGTCTCACGTGGAGTCCATGTCGTAGTTGAACGCTCGGTGCCACATTC TTCGCTCGTAGGAAAAAAATCCGCGAGACCGAACCTTATGCTACTACTGG GCACGCACGACAGGTGCCGACAGGGTCCGAGGATAATGATGCCACCGTGG CGTCACTTTCAGAAGGAAAAGATGGCCGCACAGTACCTGCGGCGACGGGG GTCGAGTTCGTGCTTGATGGAAAGGTCGAACAGGTCAATATCGCCGCTCC CGGGTCGCACGGACGCTCGGGATCGGCTGTTGTCGTGACGGCCGGGGCGC TGCATACGCCCAAGGTTGGTGTTGAATGCTGGCAAAGGACAAGATTTACG TATATGAACCATGTCACGATATGTGGTTGCATGAGGTGTGTTGAATGGGC GTCCTGTTGTTCGTGCAGACGCGCTTCCCTTTGCAATGGTCGGACCGTCG CCAGGTCGCTGTACCGCCGTTGGGAATTGCGGTTGTTGCATGCGCATCTG TGAACGTGTGTTCCAAAAGAGCTCCCTTTCTAGCATGCCGTGCTGCACTG AGCACGGAGTGGATTTTCGTCGCCCTCTCGTTTGCGATGCATGGGGATGG CACCTATGCGCATTTTACCTCATGTACACGTACGCTCAAGCGATGTCGAC GCAACTATTGCCTTTCCGGCGCTTTGTGGCGCTTTCTTGAAAGTGTGTTC GTTGCTCACTTCACAATGTTCTGAATTACTTGGAAAGCTGCCTTCCCGCA GCCCCAGGCAGTATGTGTTGTTGGCTGTTCAACCCCGGCTTGAGACTTGT GAGATTTCGATTTCCTCAAGGCGTGGTTCGATGGTACGTTTGTGTTTATT TCGGTCAGCTGCTGATGACATCCGGAATCGGGAACAAGGCTGAGTTAGAG GCACATGGCCTTGGTTGCATCGCTGATGTCCCAGAGCTTGGCAAGAATCT GCAGGTGTGTCACACGTTCGATTGTCTTCCCTGTTGGTTTCTCGAAAATG CTTTTCGACGTTCATGAGTTCTATGGTGTACCTCAGCAAGTTGCCGCTTA CCACATCGTCCCTTTTGCCTGCCGCAGTATCCTTGCTGACACTTTTGTTT GATGAACCAGCCGTTACTCCAGCCATTTTCTCTTCACGGTATGGCAGTCT TAGCCTCGTATGCGCCCCCCCCATACTTAGTTGTGACATGTTATGTAGCA TAGTAAAAAAACAACCATCTGAGACAGTCGTCAAGGGGATGTATTGGAGT CCTTACAGTGAAGCTCAAGTCTCACACGCCTGCTAGAGGCGGTACTGTTG GCTGTGTCGAAGTCTTTACACGCAGGTTCTCTGCCACGGTCTCTCTTCTC CGCCCCATGTGCGCAGGATCACGCAAGCGTTGGTGTGATGTACATGCTGG GACCCGATATTTTGAAGCTTATGCCTTCGGCCTACACGGTCGCCCAAGAA CTGGAGAGATATAAAATGGGGGTGCTCAAGGTTAGTGCCGTTCCAGTAGA AGCAGGCAACCGTGAAGTTTGGTTGCGTTTGATGCCCCTCACCGATCCAG TTCCCTGAAGACTTGAACACGAGTGAGCGTACATCGCTCGTCGCTCCGCC TAAGTTAGGAAGGTGGTGACATCAGCCTCTCTAGGCCCCATGCCGTACTC AACCAAACCTTGTGACCCGTTATCCCTAAGCAAACAGCACGGCTGGTACC CTTGTGCCCCACTCCTCTTGACTGCCCTCCGCCGTTTCTGCGACAGGCGT TCGACCTTAACTTCCCCCCCGGTGTGACGATCGGAGGAGTTGATTCTGAT GACCTCACGAACGGCGAGCAGAACGCCCCGTCTATCTTCAGCTCTGCAGG ACTCAGTGCGGGAGCGTTCCTCAAGTCCCCGTACGAGTCGCATCCAGCGG GATCGAACGATTCTGCTCCAGACATTCAGGTTCGTGTGCAACCGCAACAG ACAGCCAAGAGCTGTGCGTTATCCCCGTCGTGGACAATACAGAAGGAGTT TTTACCTTGGCGGACTCAAGACTTCCCCTGGGAGGCTCACGCTGTCTTAC GTTTTATTCCCAAGATTGTCGGTATTCAATGTCGGATTGGGTAGCCAGTG CTCTTTACATCCATGCGCTCATTCTTCCGTATGAGAGCGAGAGAGTTCAT GAAGATGCTGTAGTGTTTAAGTGAGGTTGGCAGCAGCGGGCTACTCGGGC GGTGCTGTTGACTATGGGCCATACGAGAATGTAGTTGGTCTCTCCACTCT GTGCAGCTTCTGTTGGCCTGGATCACCTTCTCAGCAGGAATTTATCAGCT TGTACATGTATCCTTGGTCCAGGTGTTTGGTTTATGAAGTATGGATTCAC CCCATACAGCATGAACTCACCCTCCCCGTACCAGATCTTCGAGTTGTAAG CCTCGTTCATGCATTTGTATTGGAATCCTACGTAGGGAATACCCTTTGTT GGCCTGAAAGTTGTCGCGAACCTGAAATCAGATTGTCTAAGATGGAAGTT TGTAAACTTGTTGGAGTTGTATGTATACGCGTGCCTTTTGCTTAGGTGAG GACGGTGGCAGAGTTGCTAGCCTCTGAAAGCACGGCCTACCTTTTTAAAC GCAGTGTAGTTGTCTGCCCCTAATTCCATCCGTTCCTGTCTCCGATTCGT TCTGACCGAAACAACAGCTGACAGTATTCCCAAGGGTGACGGAGCCCCAC ATTCTCGCCCTCGTGAACATAAGACCATCGGCGCAGGCCCCACCCATGAT GCTCGTGACGGTCTCCGTGTTGGACCCCGAGGGTCGATGCGTCGTTCGAT TAAACGAGGATGACCCGCACCGGGGCAACCCACACATCGAACGTGACCAG CGGGAGGGGGAGCCCGACCCACTGAGCGAGCTAGACGCGAAGAAGCTGGC GTGGGGGGTGGGGCAAGTACGCAGAATAGCGCAGACTACTCCTCTTCTGG AGGAACTCCGCGGAGAGGTTTATCCTGGCCCCGGGGTGAGCGGTGCCGCC GATGACACCGCCGGCGAAGACGTCGATCTGGTGGGCTGGGTCAAACAGCA CGTGTACAGCAACAGCCACTGGTGCGGGACGGCCCGTATGGGCAAGGCGT CCGATCCGAAGAGCGTGGTGAACGAGAGGATGAAGGTAATCGGTGTCGAC AATCTTTTCGTCGGCGATGCTTCTGTGCTACCCTACATCCCCAACGGGAA CGTGCACTCCACGGTGGTCCTCGTGGCAACAAAGCTGGCTAGTTACCTGG TAGCCGATGCTGCCACTGTCCGCAAGGGCAAGACAGGAGATCACCGTGAG TAGGCTGAGTGGCAACGTGACCCTTGCTTGGAGTCCTGAGTGTTTGTATG ATTGGATCGGCGGTGGTGTCCAAGCTCCAAGTTTTGGAATCTGCGTTTGC ATTTTGCGTGGTGCGTGAAGTCGGTCATGGTGGTGGGGTGAAATTGCTTG TTTTTGTACCTTGTTTTCATTGCCCAGTTTCGGGTAGTTCGCTTGTGACT ACGGAAGGCGTGTGCATCAGTTGGGCCAGTTGTACCGATGTTAGAAGGGC CTGACCAGAGATCGGAATGGTGACGACAATATCAGCGTAGATGTTATCAT TTTGCGCCGATGATCGCATGGGCTTGTCAGGTAGAACATAGTAGTTCGTC CATGGGTTGTTGATGAAGGAAAAAACTTCCAATCCATCGGCTAGGAAACA GTGGGGGGTCCGCGAGCGTGCGTGTGTTTTTACAATTTGGTGGTGTCGGG GTTGCTTGTGTTTGTTGTCCTGGAGTGCTGTTTCTTTACCTCCGTGTAGA GCTCATCCCCCCGATGGGAACACGATACTGTGTTTTTTTAGTGTTGAGAA TCTGTTTCCTCCCTTCGTTGTGTAGCTCGTCGCCTTTCTCACGTGGTCGA CTGTAAAATGTCTACTGTCCACTAGCACAAGACATGTAGTCTTAAGTATT TCTGCAACGCCGGAGCTCTGCAAGGGCAGAGCCTCTACGCGCCTGTAGAA TATCGTGCGTTCAACTTTGGAGCACGTGTGTATGCATGGCAAATCAACTT GTGGTTTTCCAACGACTCCTGCAGCCCTTGGCACTTGTGGCTCGGCATCA CGCACACATGTGCTATTTCTCTCCTGTGCGCAGATGCTGCCATGGGCTCA ATGTTGACCTTTGCTGCGTTCGACACAACCTAGAGCAGGTGAAGCAAAAG CGC
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Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig1110:321..5673+

>mRNA_E-siliculosus-1a_F_contig1110.748.1 ID=mRNA_E-siliculosus-1a_F_contig1110.748.1|Name=mRNA_E-siliculosus-1a_F_contig1110.748.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=3450bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1110:321..5673+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
ATGGACCACACCAAGGACGAGCACCAGAACGCCCTCGTCGCGAAAGCTCT
TGGTGGCTGCGGCATCCACAACGCCATGCTTTACGTCCGTGGCCTGGAGT
CCGACTTCTCCAAGTGGGACGTAGAAGGGTTCGACTACGCCTCCGCGGTG
GAAACCTGGAAAAAGAACGAGAACTACACGGGGCGGGGACCCCTTCCCGA
GTGGCACGGACGAGGCGGGCCGATCGCGACGTCACCCCCGGACTTTATAG
ATGAGATGGACCACACCAAGGACGAGCACCAGAACGCCCTCGTCGCGAAA
GCTCTTGGTGGCTGCGGCATCCACAACGCCATGCTTTACGTCCGTGGCCT
GGAGTCCGACTTCTCCAAGTGGGACGTAGAAGGGTTCGACTACGCCTCCG
CGGTGGAAACCTGGAAAAAGAACGAGAACTACACGGGGCGGGGACCCCTT
CCCGAGTGGCACGGACGAGGCGGGCCGATCGCGACGTCACCCCCGGACTT
TATAGATGAGGTGGCCCCCTTTTTTTTGGACAGCTGCGAAGGGGCGGGTA
TCAGGTTGACCGAGGATTTCAACAAGCCTGGAGGACGGGAAGGAGCGGGA
TATTACCATTTTGCTGTCCGAGATGGAGTGCGAGATAGCGCAGCGAGGGC
CATGCTAGGCGACATCGTGATGGGCAGGGACGTCCGCACGAACCTTGACA
TTGTGACGGGAGCTCACGTCAGCAAGGTGTTGATCGAGGATGCTCAACCG
GTGGCCCCCTTTTTTTTGGACAGCTGCGAAGGGGCGGGTATCAGGTTGAC
CGAGGATTTCAACAAGCCTGGAGGACGGGAAGGAGCGGGATATTACCATT
TTGCTGTCCGAGATGGAGTGCGAGATAGCGCAGCGAGGGCCATGCTAGGC
GACATCGTGATGGGCAGGGACGTCCGCACGAACCTTGACATTGTGACGGG
AGCTCACGTCAGCAAGGTGTTGATCGAGGATGCTCAACCGGTGCCGACAG
GGTCCGAGGATAATGATGCCACCGTGGCGTCACTTTCAGAAGGAAAAGAT
GGCCGCACAGTACCTGCGGCGACGGGGGTCGAGTTCGTGCTTGATGGAAA
GGTCGAACAGGTCAATATCGCCGCTCCCGGGTCGCACGGACGCTCGGGAT
CGGCTGTTGTCGTGACGGCCGGGGCGCTGCATACGCCCAAGGTGCCGACA
GGGTCCGAGGATAATGATGCCACCGTGGCGTCACTTTCAGAAGGAAAAGA
TGGCCGCACAGTACCTGCGGCGACGGGGGTCGAGTTCGTGCTTGATGGAA
AGGTCGAACAGGTCAATATCGCCGCTCCCGGGTCGCACGGACGCTCGGGA
TCGGCTGTTGTCGTGACGGCCGGGGCGCTGCATACGCCCAAGCTGCTGAT
GACATCCGGAATCGGGAACAAGGCTGAGTTAGAGGCACATGGCCTTGGTT
GCATCGCTGATGTCCCAGAGCTTGGCAAGAATCTGCAGCTGCTGATGACA
TCCGGAATCGGGAACAAGGCTGAGTTAGAGGCACATGGCCTTGGTTGCAT
CGCTGATGTCCCAGAGCTTGGCAAGAATCTGCAGGATCACGCAAGCGTTG
GTGTGATGTACATGCTGGGACCCGATATTTTGAAGCTTATGCCTTCGGCC
TACACGGTCGCCCAAGAACTGGAGAGATATAAAATGGGGGTGCTCAAGGA
TCACGCAAGCGTTGGTGTGATGTACATGCTGGGACCCGATATTTTGAAGC
TTATGCCTTCGGCCTACACGGTCGCCCAAGAACTGGAGAGATATAAAATG
GGGGTGCTCAAGGCGTTCGACCTTAACTTCCCCCCCGGTGTGACGATCGG
AGGAGTTGATTCTGATGACCTCACGAACGGCGAGCAGAACGCCCCGTCTA
TCTTCAGCTCTGCAGGACTCAGTGCGGGAGCGTTCCTCAAGTCCCCGTAC
GAGTCGCATCCAGCGGGATCGAACGATTCTGCTCCAGACATTCAGGCGTT
CGACCTTAACTTCCCCCCCGGTGTGACGATCGGAGGAGTTGATTCTGATG
ACCTCACGAACGGCGAGCAGAACGCCCCGTCTATCTTCAGCTCTGCAGGA
CTCAGTGCGGGAGCGTTCCTCAAGTCCCCGTACGAGTCGCATCCAGCGGG
ATCGAACGATTCTGCTCCAGACATTCAGCTGACAGTATTCCCAAGGGTGA
CGGAGCCCCACATTCTCGCCCTCGTGAACATAAGACCATCGGCGCAGGCC
CCACCCATGATGCTCGTGACGGTCTCCGTGTTGGACCCCGAGGGTCGATG
CGTCGTTCGATTAAACGAGGATGACCCGCACCGGGGCAACCCACACATCG
AACGTGACCAGCGGGAGGGGGAGCCCGACCCACTGAGCGAGCTAGACGCG
AAGAAGCTGGCGTGGGGGGTGGGGCAAGTACGCAGAATAGCGCAGACTAC
TCCTCTTCTGGAGGAACTCCGCGGAGAGGTTTATCCTGGCCCCGGGGTGA
GCGGTGCCGCCGATGACACCGCCGGCGAAGACGTCGATCTGGTGGGCTGG
GTCAAACAGCACGTGTACAGCAACAGCCACTGGTGCGGGACGGCCCGTAT
GGGCAAGGCGTCCGATCCGAAGAGCGTGGTGAACGAGAGGATGAAGGTAA
TCGGTGTCGACAATCTTTTCGTCGGCGATGCTTCTGTGCTACCCTACATC
CCCAACGGGAACGTGCACTCCACGGTGGTCCTCGTGGCAACAAAGCTGGC
TAGTTACCTGGTAGCCGATGCTGCCACTGTCCGCAAGGGCAAGACAGGAG
ATCACCGTGAGTAGCTGACAGTATTCCCAAGGGTGACGGAGCCCCACATT
CTCGCCCTCGTGAACATAAGACCATCGGCGCAGGCCCCACCCATGATGCT
CGTGACGGTCTCCGTGTTGGACCCCGAGGGTCGATGCGTCGTTCGATTAA
ACGAGGATGACCCGCACCGGGGCAACCCACACATCGAACGTGACCAGCGG
GAGGGGGAGCCCGACCCACTGAGCGAGCTAGACGCGAAGAAGCTGGCGTG
GGGGGTGGGGCAAGTACGCAGAATAGCGCAGACTACTCCTCTTCTGGAGG
AACTCCGCGGAGAGGTTTATCCTGGCCCCGGGGTGAGCGGTGCCGCCGAT
GACACCGCCGGCGAAGACGTCGATCTGGTGGGCTGGGTCAAACAGCACGT
GTACAGCAACAGCCACTGGTGCGGGACGGCCCGTATGGGCAAGGCGTCCG
ATCCGAAGAGCGTGGTGAACGAGAGGATGAAGGTAATCGGTGTCGACAAT
CTTTTCGTCGGCGATGCTTCTGTGCTACCCTACATCCCCAACGGGAACGT
GCACTCCACGGTGGTCCTCGTGGCAACAAAGCTGGCTAGTTACCTGGTAG
CCGATGCTGCCACTGTCCGCAAGGGCAAGACAGGAGATCACCGTGAGTAG
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