mRNA_E-siliculosus-1a_F_contig110.693.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-siliculosus-1a_F_contig110.693.1
Unique NamemRNA_E-siliculosus-1a_F_contig110.693.1
TypemRNA
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig110.693.1 vs. uniprot
Match: A0A6H5LI82_9PHAE (Nucleotid_trans domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5LI82_9PHAE)

HSP 1 Score: 644 bits (1660), Expect = 2.120e-225
Identity = 316/320 (98.75%), Postives = 317/320 (99.06%), Query Frame = 3
Query:  138 MAGFFISCVVLATAVFCGRSAAEEVAPGPAVSRRLPAITPKATCADWMKWIPPRSDPAIVMQVVSRHYLELERNFIRLMELNSALTRDHLYLMCMDNVSVHFFESSMNIRCIPLTAFDFPSHAEIWVLRARVVSCLVEAGQDVIMSDADALWLDDPFKDFNLPRVIDSSVVASRGKFPKPLGLEWGATMCMGFVLFRATGRGVVGEFLEVMDALVHKNKDDQISVNLAAENLGIVWDQESDMRYVESDSFGFGTIDTLVDENNQPFSVTLLPHNAYTRVCDETPISNKTVVAHCWAPKTADSKTGWMVQSKLWFSDNETR 1097
            MA FFISC+VLATAVFCGRSAAEEVA GPAVSRRLPAITPKATCADWMKWIPPRSDPAIVMQVVSRHYLELERNFIRLMELNSALTRDHLYLMCMDNVSVHFFESSMNIRCIPLTAFDFPSHAEIWVLRARVVSCLVEAGQDVIMSDADALWLDDPFKDFNLPRVIDSSVVASRGKFPKPLGLEWGATMCMGFVLFRATGR VVGEFLEVMDALVHKNKDDQISVNLAAENLGIVWDQESDMRYVESDSFGFGTIDTLVDENNQPFSVTLLPHNAYTRVCDETPISNKTVVAHCWAPKTADSKTGWMVQSKLWFSDNETR
Sbjct:    1 MASFFISCLVLATAVFCGRSAAEEVAHGPAVSRRLPAITPKATCADWMKWIPPRSDPAIVMQVVSRHYLELERNFIRLMELNSALTRDHLYLMCMDNVSVHFFESSMNIRCIPLTAFDFPSHAEIWVLRARVVSCLVEAGQDVIMSDADALWLDDPFKDFNLPRVIDSSVVASRGKFPKPLGLEWGATMCMGFVLFRATGRRVVGEFLEVMDALVHKNKDDQISVNLAAENLGIVWDQESDMRYVESDSFGFGTIDTLVDENNQPFSVTLLPHNAYTRVCDETPISNKTVVAHCWAPKTADSKTGWMVQSKLWFSDNETR 320          
BLAST of mRNA_E-siliculosus-1a_F_contig110.693.1 vs. uniprot
Match: D8LK17_ECTSI (Nucleotid_trans domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LK17_ECTSI)

HSP 1 Score: 314 bits (804), Expect = 1.370e-96
Identity = 169/311 (54.34%), Postives = 203/311 (65.27%), Query Frame = 3
Query:  240 LPAITPKATCADWMKWIPPRSDPAIVMQVVSRHYLELERNFIRLMELNSALTRDHLYLMCMDNVSVHFFESSMNIRCIPLTAFDFPSHAEIWVLRARVVSCLVEAGQ-DVIMSDADALWLDDPFKD-FNLPRVIDSSVVASRGKFPKPLGLEWGATMCMGFVLFRATGRGVVGEFLEVMDALVHKNKDDQISVNLAAENLGIVWDQESDMRYVESDSFGFGTIDTLVDENNQ----------------------------PFSVTLLPHNAYTRVCDETPISNKT-VVAHCWAP-KTADSKTGWMVQSKLW 1076
            LPAIT  ATC DW  WIPPRS PA+VMQVVS  Y+++ERNFIRLME NS  TR ++YLMCMD+ S +FF++ M IRC+P++A D P+H  IW LR RVVSCL+E G  DVIMSDADALWL DP KD F+        +VASRG +P     EWG+T+CMGF+LFRA     +  FL+VM  LV +NKDDQISVN AA+ LGIVWD+ SDMRY ES  +G G I  L   NN                             PF VTLLPH+AYTR+C    +SN+T VVAHC+ P K A  KT WM ++ LW
Sbjct:   27 LPAITKDATCVDWAAWIPPRSRPAVVMQVVSEGYIDIERNFIRLMERNSGFTRRNIYLMCMDDASKNFFDTKMGIRCVPMSALDLPTHEHIWQLRVRVVSCLLEIGNVDVIMSDADALWLADPAKDLFSRGDGGRGDIVASRGSWPNDQWKEWGSTLCMGFILFRARNVAGMKRFLDVMADLVVQNKDDQISVNRAAKQLGIVWDKNSDMRYEESTGYGRGIIAGLGTSNNSTSGGGGDLFIGQTGHGVVVGRGTREVEAPFRVTLLPHSAYTRLCGRRTLSNQTTVVAHCYFPQKEAGVKTSWMKKANLW 337          
BLAST of mRNA_E-siliculosus-1a_F_contig110.693.1 vs. uniprot
Match: A0A6H5KMQ8_9PHAE (Nucleotid_trans domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMQ8_9PHAE)

HSP 1 Score: 262 bits (670), Expect = 6.080e-77
Identity = 136/284 (47.89%), Postives = 178/284 (62.68%), Query Frame = 3
Query:  228 VSRRLPAITPKATCADWMKWIPPRSDPAIVMQVVSRHYLELERNFIRLMELNSALTRDHLYLMCMDNVSVHFFESSMNIRCIPLTAFDFP-SHAEIWVLRARVVSCLVEAGQDVIMSDADALWLDDPFKDFNLPRVIDSSVVASRGKFPKPLGLEWGATMCMGFVLFRATGRGVVGEFLEVMDALVHKNKDDQISVNLAAENLGIVWDQESDMRYVESDSFGFGTIDTLVDENNQPFSVTLLPHNAYTRVCDETPISNKTVVAHCWAPKTADSKTGWMVQSKLW 1076
            V+  LP IT  ++C+D + W+PPRS PA+V QVVS  Y  LE NFI  MEL+S  +R++LYL+C+D  SV  F+  + IRC+       P S  ++WVLR     CL+ AGQDV+MSDADA+WL DP  DF     +DS+VVASR   P PL  +WGAT+CMGF  FRA G  +   F+ V+  +V++  DDQ +VN A + LG+VWD  SDM +  S   G G I+ +   N  P  VTLLPHN YTR C  TPISN T+VAHC +    +    WM ++ LW
Sbjct:   57 VAGTLPPITKDSSCSDMLAWLPPRSSPAVVFQVVSEPYASLEANFISNMELHSTFSRENLYLVCLDEESVAIFDG-LGIRCVRYGCLGCPMSRLDVWVLRVEATLCLLNAGQDVLMSDADAIWLRDPTNDFASDLNMDSNVVASRAVMPFPLYHKWGATVCMGFAFFRAGGSAMQA-FMTVVGEIVNELGDDQKAVNEALDKLGVVWDPTSDMDFTNSTRPGTGVIENIT-ANGDPLKVTLLPHNKYTRSCRRTPISNDTIVAHCVSSDKGEGMATWMKEAHLW 337          
BLAST of mRNA_E-siliculosus-1a_F_contig110.693.1 vs. uniprot
Match: D7FGV6_ECTSI (Acetyltransferase (Isoleucine patch superfamily protein) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FGV6_ECTSI)

HSP 1 Score: 254 bits (650), Expect = 4.270e-73
Identity = 132/284 (46.48%), Postives = 177/284 (62.32%), Query Frame = 3
Query:  228 VSRRLPAITPKATCADWMKWIPPRSDPAIVMQVVSRHYLELERNFIRLMELNSALTRDHLYLMCMDNVSVHFFESSMNIRCIPLTAFDFP-SHAEIWVLRARVVSCLVEAGQDVIMSDADALWLDDPFKDFNLPRVIDSSVVASRGKFPKPLGLEWGATMCMGFVLFRATGRGVVGEFLEVMDALVHKNKDDQISVNLAAENLGIVWDQESDMRYVESDSFGFGTIDTLVDENNQPFSVTLLPHNAYTRVCDETPISNKTVVAHCWAPKTADSKTGWMVQSKLW 1076
            V+  LP IT  ++C+D + W+PPRS PA+V QVVS  Y  LE NFI  MEL+S  +R++LYL+C+D  SV  F+  + IRC+       P S  +IWVLR  V  CL+ AGQDV+MSDADA+WL DP  D      +DS+VVASR   P PL  +WGAT+CMGF  FRA G  +   F+ V++ + ++  +DQI+VN A   L +VWD  SDM + ++   G G I+ +  +      VTLLPHN YTR C  TPISN T+VAHC +    +    WM ++ LW
Sbjct:  132 VAGTLPPITKDSSCSDMLAWLPPRSSPAVVFQVVSEPYASLEENFISNMELHSTFSRENLYLVCLDEESVAIFDG-LGIRCVRYGCLGCPVSRGDIWVLRIDVTICLLNAGQDVLMSDADAIWLRDPTDDLASDAFLDSNVVASRAVMPFPLYHKWGATICMGFAFFRAGGSAMQA-FMTVVEEIANELGNDQIAVNEALNKLDVVWDPMSDMNFTDNTRPGTGVIENITVDGGS-LKVTLLPHNKYTRSCRRTPISNDTIVAHCVSSDKGEGMATWMKEAHLW 412          
BLAST of mRNA_E-siliculosus-1a_F_contig110.693.1 vs. uniprot
Match: D8LSV3_ECTSI (Nucleotid_trans domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LSV3_ECTSI)

HSP 1 Score: 251 bits (640), Expect = 6.620e-72
Identity = 128/280 (45.71%), Postives = 182/280 (65.00%), Query Frame = 3
Query:  240 LPAITPKATCADWMKWIPPRSDPAIVMQVVSRHYLELERNFIRLMELNSALTRDHLYLMCMDNVSVHFFESSMNIRCIPLTAFDFP-SHAEIWVLRARVVSCLVEAGQDVIMSDADALWLDDPFKDFNLPRVIDSSVVASRGKFPKPLGLEWGATMCMGFVLFRATGRGVVGEFLEVMDALVHKNKDDQISVNLAAENLGIVWDQESDMRYVESDSFGFGTIDTLVDENNQPFSVTLLPHNAYTRVCDETPISNKTVVAHCWAPKTADSKTGWMVQSKLW 1076
            L AI+  A+CAD + W+PP+  PA+V QVVS+ Y+ +++NFI  MEL+S  +R+++YL+C+D  SV  F  ++ IRC+       P S   +W LR  V  CL++AG DV+MSDADA+WL DP  DF+     DSS+VASRG  P PL   WGAT+CMGFVLFRA G   + +F+EV+     + ++DQ +VNLA + L +VWD  SDM + +S   G G ++++   + +  +V+LLPHN YTR C  TPIS +TVVAHC +    +    WM ++ LW
Sbjct:  119 LLAISRHASCADIVAWLPPQLQPAVVFQVVSKAYVSVQKNFISNMELHSTFSRENMYLICLDEESVESF-GALGIRCVRFGCMGCPVSRHHVWALRIEVSVCLLKAGIDVLMSDADAVWLHDPMDDFDSDDYRDSSIVASRGAMPVPLFRTWGATICMGFVLFRA-GSNAIYQFMEVVGEFTEELENDQQAVNLALQKLDVVWDPTSDMSFSDSTRSGVGVVNSIY--SGESLTVSLLPHNKYTRSCRRTPISVETVVAHCISTDKGEGMATWMKEAHLW 394          
BLAST of mRNA_E-siliculosus-1a_F_contig110.693.1 vs. uniprot
Match: D7G4E2_ECTSI (Nucleotid_trans domain-containing protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4E2_ECTSI)

HSP 1 Score: 240 bits (612), Expect = 6.390e-70
Identity = 122/199 (61.31%), Postives = 148/199 (74.37%), Query Frame = 3
Query:  513 WV--LRARVVSCLVEAGQDVIMSDADALWLDDPFKDFNLPRVIDSSVVASRGKFPKPLGLEWGATMCMGFVLFRATG-RGVVGEFLEVMDALVHKNKDDQISVNLAAENLGIVWDQE-SDMRYVESDSFGFGTIDTLVDENNQPFSVTLLPHNAYTRVCDETPISNKTVVAHCWAPKTADSKTGWMVQSKLWFSDNETR 1097
            WV  +    V   VEAG DV+MSDADALWL DP KDF+LP V+ SS+VASRG FP  +G  WGAT+CMGF+LFR T  R  + EF+ VM+ALV + KDDQI+VN+AA +LGIVW+QE SDMRY ES  FG G ID+L D++NQPF+VTLLPH+AYTR+C  TP+SN TVVAHC + KT  SK  WM +  LW  D +TR
Sbjct:   51 WVPPMSGPTVVMQVEAGHDVMMSDADALWLADPMKDFSLPGVVGSSIVASRGSFPGEVGHVWGATICMGFILFRTTASRVAMREFVTVMNALVLEEKDDQIAVNIAARDLGIVWNQEDSDMRYTESTGFGVGFIDSLSDDDNQPFTVTLLPHSAYTRICASTPVSNTTVVAHCISSKTPQSKADWMHRMDLWAVDEDTR 249          
BLAST of mRNA_E-siliculosus-1a_F_contig110.693.1 vs. uniprot
Match: D7FQM0_ECTSI (Nucleotid_trans domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQM0_ECTSI)

HSP 1 Score: 206 bits (524), Expect = 1.260e-58
Identity = 100/148 (67.57%), Postives = 121/148 (81.76%), Query Frame = 3
Query:  372 MELNSALTRDHLYLMCMDNVSVHFFESSMNIRCIPLTAFDFPSHAEIWVLRARVVSCLVEAGQDVIMSDADALWLDDPFKDFNLPRVIDSSVVASRGKFPKPLGLEWGATMCMGFVLFRATG-RGVVGEFLEVMDALVHKNKDDQISV 812
            MEL ++ TR+HLYLMC+D+ S+HFFES M I CIPL+  +  SH +IWVLR RVVSCL EAG DVIMSDADALWL DP KDF+LP VIDSS+VASRGK PK +G  WGATMCMGF+LFRAT  R  +G+F+ VM+ALV +++DDQI+V
Sbjct:    1 MELRTSFTRNHLYLMCLDDDSLHFFESFMGIHCIPLSGLNISSHEQIWVLRVRVVSCLAEAGHDVIMSDADALWLADPMKDFSLPGVIDSSIVASRGKKPKEVGKVWGATMCMGFILFRATANRTAMGKFVTVMNALVFESEDDQIAV 148          
BLAST of mRNA_E-siliculosus-1a_F_contig110.693.1 vs. uniprot
Match: A0A6H5JTX9_9PHAE (Nucleotid_trans domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTX9_9PHAE)

HSP 1 Score: 202 bits (515), Expect = 7.420e-55
Identity = 115/260 (44.23%), Postives = 146/260 (56.15%), Query Frame = 3
Query:  312 IVMQVVSRHYLELERNFIRLMELNSALTRDHLYLMCMDNVSVHFFESSMNIRCIPLTAFDFPSHAEIWVLRARVVSCLVEAGQ-DVIMSDADALWLDDPFKD-FNLPRVIDSSVVASRGKFPKPLGLEWGATMCMGFVLFRATGRGVVGEFLEVMDALVHKNKDDQ-----------------------------------------------------ISVNLAAENLGIVWDQESDMRYVESDSFGFGTIDTLVDENN 926
            + + VVS  Y+++ERNFIRLME NS  TR ++YLMCMD  S +FF++ M IRC+P++A D P+H +IW LR +VVSCL+E G  DVIMSDADALWL DP KD F+        ++ASRG +P     EWG+T+CMGF++FRA     +  FL+VM  LV +NKDDQ                                                     ISVN AA+ LGIVWD+ SDMRY ES  +G G I  L   NN
Sbjct:    1 MTVPVVSEGYIDIERNFIRLMERNSGFTRSNIYLMCMDGASKNFFDAKMGIRCVPMSALDLPTHQDIWQLRVKVVSCLLEVGHVDVIMSDADALWLADPAKDLFSRGGGGRGDIIASRGSWPNEQSKEWGSTLCMGFIVFRARNVAGMKRFLDVMADLVVQNKDDQMLCECATGVENDFCGFPASSRPRSNPTLTESAFCVAAPSPNASLILSIVSVEKISVNRAAKQLGIVWDKNSDMRYEESTGYGRGVIAGLGSSNN 260          
BLAST of mRNA_E-siliculosus-1a_F_contig110.693.1 vs. uniprot
Match: A0A8J6CCA2_DIALT (Nucleotid_trans domain-containing protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J6CCA2_DIALT)

HSP 1 Score: 109 bits (273), Expect = 2.310e-22
Identity = 79/271 (29.15%), Postives = 130/271 (47.97%), Query Frame = 3
Query:  312 IVMQVVSRHYLELERNFIRLMELNSALTRDHL-----YLMCMDNVSVHFFESSMNIRCIPLTAFDFPSHAEIWVLRARVVSCLVEAGQDVIMSDADALWLDDPFKDFNLPRVIDSSVVASRGKFPKPLGLEWGATMCMGFVLFRATGRGVVGEFLEVMDALVHKNKDDQISVNLAAENLGIVWDQESDMRYVESDSFGFGTIDTL-VDENNQPFSVTLLPHNAYTRVCDETPISNKTVVAHCWAP-KTADSKTGWMVQSKLWFSDNETR*D 1103
            +V+ V++  Y  +  NFIR      A    HL     +++C D  +     + +  RC   T     S A+++  R   V+ LV  G+DV+++D DA+WL DP  D        + ++ SRG+ P    L+WGA++CMGF+ FR +   V       M  L    ++DQ   N   +   +VWD E  +R+V+S    FGT+     +  +    V +LPH +Y R+C++    +  ++AHC +  K A  K   +    LW+   + R D
Sbjct:   50 VVVMVLNSAYTRVFENFIR------APGAHHLAAWETHIICTDRATAVSL-AKLGWRCQD-TVKTGRSAAQVYTRRIPYVAHLVHLGRDVLITDVDAIWLGDPLPDI---MATQAGIIGSRGRSPH---LDWGASLCMGFIFFRGSDPLVRA----AMPVLTEPMREDQTDFNHNMQRERLVWD-EGRVRFVDSIDTSFGTLRPKNANAGHAGLRVAMLPHKSYVRICEDKVDYSTVIIAHCHSRGKRAHLKVQSLGAKNLWYIPEKGRPD 301          
BLAST of mRNA_E-siliculosus-1a_F_contig110.693.1 vs. uniprot
Match: A0A7S4TAX3_9DINO (Hypothetical protein (Fragment) n=1 Tax=Alexandrium monilatum TaxID=311494 RepID=A0A7S4TAX3_9DINO)

HSP 1 Score: 87.4 bits (215), Expect = 7.240e-15
Identity = 77/273 (28.21%), Postives = 123/273 (45.05%), Query Frame = 3
Query:  261 ATCADWMKWIPPRSDPAIVM-QVVSRHYLELERNFIRL---MELNSALTRDHLYLMCMDNVSVHFFESSMN-IRCIPLTAFDFPSHAEIWVLRARVVSCLVEAGQDVIMSDADALWLDDPFKDF-NLPR-VIDSSVVASRGKFPKPLGLEWGATMCMGFVLFRATGRGVVGEFLEVMDALVHKNKDDQISVNLAAENLGIVWDQESDMRYVESDSFGFGTIDTLVDENNQPFSVTLLPHNAYTRVCDETPISNKTVVAHCWAPKTADSKT-GW 1055
            A C D + W   R+   +V+  VVS  YL++ R ++R    + ++      H+ ++C+D  +    E   +    +        +   +  +R RV + L E G DV+ +D DA+WL DP   F +L R      +V+SRG +P+ L   WGAT+C G + +   GR   G F   +     +  DDQ  +N      G+ W     + Y  S       +  L  E      V LLPH+++ R+C +  +  + VV HC   K A  K  GW
Sbjct:   70 AECID-VSWFARRAVRGLVVFSVVSVDYLDVARAWLRRIGRLNISDLRVSKHVSMVCVDPAARAALERIGHPCHLLQPAGPSASAFGAVAFVRHRVAARLNERGLDVLYTDLDAIWLQDPLPTFRSLARQAAGPLLVSSRGSYPERLSELWGATLCTGVLFWH--GR-FPGRFWAELAEAAGRATDDQAPLNELLAAQGLRWGPSPRLAYANSSRLDRARVPGLGLE------VALLPHSSFPRLCRDL-VEEEVVVLHCLRDKRAGRKALGW 331          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig110.693.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 19
Match NameE-valueIdentityDescription
A0A6H5LI82_9PHAE2.120e-22598.75Nucleotid_trans domain-containing protein n=2 Tax=... [more]
D8LK17_ECTSI1.370e-9654.34Nucleotid_trans domain-containing protein n=1 Tax=... [more]
A0A6H5KMQ8_9PHAE6.080e-7747.89Nucleotid_trans domain-containing protein n=2 Tax=... [more]
D7FGV6_ECTSI4.270e-7346.48Acetyltransferase (Isoleucine patch superfamily pr... [more]
D8LSV3_ECTSI6.620e-7245.71Nucleotid_trans domain-containing protein n=2 Tax=... [more]
D7G4E2_ECTSI6.390e-7061.31Nucleotid_trans domain-containing protein n=2 Tax=... [more]
D7FQM0_ECTSI1.260e-5867.57Nucleotid_trans domain-containing protein n=1 Tax=... [more]
A0A6H5JTX9_9PHAE7.420e-5544.23Nucleotid_trans domain-containing protein n=1 Tax=... [more]
A0A8J6CCA2_DIALT2.310e-2229.15Nucleotid_trans domain-containing protein n=1 Tax=... [more]
A0A7S4TAX3_9DINO7.240e-1528.21Hypothetical protein (Fragment) n=1 Tax=Alexandriu... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig110contigE-siliculosus-1a_F_contig110:77476..81557 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-19
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Properties
Property NameValue
Start1
Stop1
Cds size963
Model size2459
Exons4
Ec32 orthologEc-26_001560.1
Ec32 ortholog descriptionNucleotide-diphospho-sugar transferase
Hectar predicted targeting categorysignal peptide
Best eggNOG OGNA|NA|NA
Best tax levelEukaryota
COG Functional cat.S
EggNOG OGs2C6NG@1,2SGR5@2759
EggNOG free text desc.Nucleotide-diphospho-sugar transferase
Seed eggNOG ortholog2880.D8LSV4
Seed ortholog evalue1.5e-183
Seed ortholog score648.7
Taxonomic scopeEukaryota
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig110.693.1prot_E-siliculosus-1a_F_contig110.693.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalepolypeptideE-siliculosus-1a_F_contig110 78835..81420 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927604.3868074-UTR-E-siliculosus-1a_F_contig110:77475..788341622927604.3868074-UTR-E-siliculosus-1a_F_contig110:77475..78834Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig110 77476..78834 -
1696318607.42586-UTR-E-siliculosus-1a_F_contig110:77475..788341696318607.42586-UTR-E-siliculosus-1a_F_contig110:77475..78834Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig110 77476..78834 -
1622927604.476208-UTR-E-siliculosus-1a_F_contig110:81420..815571622927604.476208-UTR-E-siliculosus-1a_F_contig110:81420..81557Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig110 81421..81557 -
1696318607.4827518-UTR-E-siliculosus-1a_F_contig110:81420..815571696318607.4827518-UTR-E-siliculosus-1a_F_contig110:81420..81557Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig110 81421..81557 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927604.4015975-CDS-E-siliculosus-1a_F_contig110:78834..791251622927604.4015975-CDS-E-siliculosus-1a_F_contig110:78834..79125Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig110 78835..79125 -
1696318607.440137-CDS-E-siliculosus-1a_F_contig110:78834..791251696318607.440137-CDS-E-siliculosus-1a_F_contig110:78834..79125Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig110 78835..79125 -
1622927604.4149437-CDS-E-siliculosus-1a_F_contig110:79282..795461622927604.4149437-CDS-E-siliculosus-1a_F_contig110:79282..79546Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig110 79283..79546 -
1696318607.448768-CDS-E-siliculosus-1a_F_contig110:79282..795461696318607.448768-CDS-E-siliculosus-1a_F_contig110:79282..79546Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig110 79283..79546 -
1622927604.441402-CDS-E-siliculosus-1a_F_contig110:80049..802711622927604.441402-CDS-E-siliculosus-1a_F_contig110:80049..80271Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig110 80050..80271 -
1696318607.4567654-CDS-E-siliculosus-1a_F_contig110:80049..802711696318607.4567654-CDS-E-siliculosus-1a_F_contig110:80049..80271Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig110 80050..80271 -
1622927604.4625719-CDS-E-siliculosus-1a_F_contig110:81234..814201622927604.4625719-CDS-E-siliculosus-1a_F_contig110:81234..81420Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig110 81235..81420 -
1696318607.4689813-CDS-E-siliculosus-1a_F_contig110:81234..814201696318607.4689813-CDS-E-siliculosus-1a_F_contig110:81234..81420Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig110 81235..81420 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-siliculosus-1a_F_contig110.693.1

>prot_E-siliculosus-1a_F_contig110.693.1 ID=prot_E-siliculosus-1a_F_contig110.693.1|Name=mRNA_E-siliculosus-1a_F_contig110.693.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=321bp
MAGFFISCVVLATAVFCGRSAAEEVAPGPAVSRRLPAITPKATCADWMKW
IPPRSDPAIVMQVVSRHYLELERNFIRLMELNSALTRDHLYLMCMDNVSV
HFFESSMNIRCIPLTAFDFPSHAEIWVLRARVVSCLVEAGQDVIMSDADA
LWLDDPFKDFNLPRVIDSSVVASRGKFPKPLGLEWGATMCMGFVLFRATG
RGVVGEFLEVMDALVHKNKDDQISVNLAAENLGIVWDQESDMRYVESDSF
GFGTIDTLVDENNQPFSVTLLPHNAYTRVCDETPISNKTVVAHCWAPKTA
DSKTGWMVQSKLWFSDNETR*
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mRNA from alignment at E-siliculosus-1a_F_contig110:77476..81557-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-siliculosus-1a_F_contig110.693.1 ID=mRNA_E-siliculosus-1a_F_contig110.693.1|Name=mRNA_E-siliculosus-1a_F_contig110.693.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=4082bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig110:77476..81557- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
GGACGTCTCCCTGGGAACGGATTCATCAGTTCACCCGATCAACCTTGCTC CGTCCCTCAGCGGCAGATATTCGAGCGAACACTGCAAGACCGCGCACGGA GTACACTGCTGTATTGTAGTACGGTCTGCACAGGTCCATGGCGGGTTTCT TCATTTCGTGCGTGGTATTGGCCACTGCGGTGTTTTGCGGACGCTCGGCA GCGGAGGAGGTGGCCCCTGGACCTGCGGTGTCCAGACGGCTTCCGGCGAT TACACCCAAGGCAACATGCGCCGACTGGATGAAGTGGATACCTCCTCGCT CGGACCCCGCGATCGTGATGCAAGTGCGTATTCCTTGAGTTAGTTAGTTA GCACAGGCCGCCAACAGGCAAACCGTACCAATACATCGGCCTTGATTTGA CCTTTGACTTTATTTAGCGCCACCACAAACAAGCGCAGTTATGCACACGT GGGTGATGTTCTCACATCTGCATCAGGTTTCGGCAAGCGGACAATCTCAC CCTCAAAGATGTGTGCTGCCCAATATGCTGATGTACCAGGCGAAAGAGTA CAAACGGAACCAACGAACGCTAAGTGTAGCGGAATGCCTGTCTATTACTG CCTTATCTCATCCAAGCCTTGTCCGAACAATACAACCGAAAGGGCTGACA CCTATGTGCGCAGCCACCAAGTTGTTCGTGATTTCCACAGTTTTTTTGGG TGCCGCCTGCGGAGCAATCTTGTTGGTAGATTCGGTTCTCAATTTCTCGG CTATCCACGAATGCCGAGCGCAAAAGTTGTACCCAACCTTCCCCGATTAG TTTCGGCGGGTGGTATGTAGTGATGGTGATTGCCACAGGGGGAAACGGGG TCTCGTATTCTGGCATGCATCCGTGTGTCTGCTGTACAGTTACAGCCAGT ACACGTACGATCATGTATGCACACATTCACATTATCGTCGCCGTGCTTAC GTTGTGCTTCACTTAGCACGTACCCCGTCTCTCTTTGCCCTTTAAGGCTT ATATCATAGCATAGTTCATGTTCCCTTCGAATGCTTGGCTTTAGTTTACA GAAACGAATCGTTTGGATGCCCAGACACGTGTGATCGTATGATGTGCTCG GTCTATGCTTTGACTCTTGTACGTGTCTACAACGTGGACTCTACGCTTCG GGTCATGTACATCTGGATGTGTATGATGTGACACTCGGACGTAATGTATC TTATTGGATTTTTCCTTACCGGCCCTCGCGTTTTCCCTTTTACGCGCCTG CCACCACACCTCTGTCTCTCGTTTGCACCGTTTCAGGTTGTGAGCAGGCA CTACTTGGAATTGGAGCGAAATTTTATTCGGCTGATGGAGCTCAACTCGG CCTTGACCCGCGACCACCTATACCTCATGTGTATGGACAACGTGTCGGTG CACTTCTTCGAATCTTCCATGAACATCCGCTGCATTCCTCTTACCGCGTT CGACTTCCCGTCCCATGCGGAGATCTGGGTTTTGAGGGCCCGTGTGGTGT CTTGTCTGGTGAGCAGGGTGGATCGTTGGTCTGGGTGCAGATGTCCCGCG GATGCACAAGTTTTCAACATCAAGATCTGACCCAGCAGGCGCGCGTCTGA TCCTATTTTCCATTTGTGTAGGCACATTTATTGGAATTTCGGATACCTGT AGGTCTGCCATGCTTTTCTGCACGCCTGAATGCGGGAGATATGGATTGTC ACTGGGTCAATCTCCTGCCCAATTTTCACCTTGTCAAACTTCCTGCGAGA GCAGGTACATGCAGTAATGTACAGTAGTCGATGGAATTTCGTGTTGCACA GTCACTTTGTGCTTGATACCAATGGAAATAATCTGGGAAATCGTCCCGCC ATTCCCTCCATAGACAGGCTGGAGGTGGTGGATCACGCAACACCTTTTGA TTTGTTCCTCTGGCCACCCGTGACGCCATGTCCATGGGACTTGGCCGCGA AGAGTGCATCACTTCTGCGCATCCTGATTGCAGCATACGCCTTCCTCTGT CCACCCTGCAGGTGGAAGCGGGCCAAGATGTGATAATGTCCGATGCAGAT GCTCTGTGGCTGGACGACCCGTTCAAGGATTTCAACCTTCCTCGCGTAAT CGACAGCAGCGTCGTCGCGTCTAGGGGGAAATTCCCCAAGCCGCTTGGTC TAGAATGGGGGGCGACGATGTGCATGGGTTTTGTTCTTTTTCGAGCGACC GGGAGAGGGGTTGTCGGAGAATTCCTCGAAGTCATGGATGCCCTGGTTCA CAAGAACAAGGACGATCAGATCTCGGTGAGTGCGTGAAAAAATGCAGGTG TGAACATGATGAAGCATATATCTGGATCTGTGGAACGTCATCCCCCAACT GCAACTGTTATCACACCCAGCTGTGACCAATGATGGTTATGTGATGAATG AATCCTCCTTTGCCGACTGCACTCAAACTCAGGTTAATCTGGCGGCCGAG AACCTGGGGATAGTGTGGGATCAGGAGAGCGACATGCGCTACGTAGAGAG TGACTCTTTCGGCTTCGGGACCATTGACACTCTTGTCGACGAAAACAATC AGCCATTCTCGGTGACGTTACTGCCGCACAACGCGTACACCCGTGTCTGC GACGAGACACCAATTTCCAACAAAACTGTCGTGGCGCATTGTTGGGCACC TAAGACAGCTGACAGCAAGACTGGTTGGATGGTGCAATCTAAGCTCTGGT TCAGTGACAATGAAACACGCTGAGATGAGGGCAGCGGAGAGTCGTGCCAA AGGCAAAGGCCGGGTGTCTGTCACCAGCATCCGCTGTGTAATCCATGGGG AAAGAGCTTCGCCAGTCGTCGAGAATGGAGACACCATGACGTTTGCTACG GAGTAGGCGACTGGCTGCATCTATCTGCAGCCCGTGCTCCTACGCGTAGC TTTACATCGATCATGAATTATGGGAATTTGTAGCAGACGTGCCACCTTCC GATATTCGAGGCCCGTGGAGTTCGGTGGTCTACTACGGTAGATGGTTCGG CACAGCCGGAATTCTATCTGCTAGGCGTATGTACGGCATACACACGCCGA TCGTAACGACTGCTTTGTCGTCATAGTACAGAGAGCGTCAAAATGATGAC AAATAAATCGGTAATAAAGTGGGTTGCTTGCTGCGTACCGTCATTCTGGT AGGCAACGGAATACTTGATTTTTTTGTGTTCGCCTGTGAAGTTTGGTGTC GGACAAATGAAATTGATTTTTTGTGAAGTGGTACTGAAAGTATCACTCGG GGAACCTCTCGTTTGGCATGCCTCCCGGCCATCCAAGAACGCGTGGTGGG TGTAAGAATATTTGGGACGGTGCAGTCCCTTTCGTGCAGTTTTGTGGAGT GGTATCGTATCATCGGACGTTTTCCGATTCCTCACCGCGTTTCTTGTGTC GCAGCGGGGGCATTAGCGAGTGGGGTACCGTAGAGTTCGCAGAGCAATAG GCGAACATGCTGGCCAAGCATGGTGCTCAGTTCACGAAACAACGTGCCCA ATTTCTCCCGCACGAAGTAGCCCTTTTGTCGGGGTGGGGGTGGATGTTCC GGGGTGGATGTTCCCACATCCAACAAATATACCGGCGAAGATCACGATGG AGAGCTTGATTTACGTTTTCGCCCTTTGTTGCTTGTCTTTCGTGGAGTGT TTGTTTGATTTCCCGGCGGTCGTGCCGTTTTCTTCGGATTCGAACTTCTC ACGGTTTCGGACGAATAATGTCGTAAAGCCCCAGTCGGAGATTTTTCCGA TTTGGCAATATTTGTAGTTGATGATGTACGAAAGACCCAAAGAAGCCTAT CTGGGAGACGAAGCGGGTTATTTTATGTACGGTGATATCTCGAGTAACAT ATTTTCCTAATTCGAGTGCGGCGAATTTCTTCTTGTCCATCCCGTGAGAG ACACTATGGGTCGTACTTGGTTTTTGCTTTTGGGGAAAAGTGAGATGTTC TTGAGTTGGAGATTCTCATCACGAACGGTCCAATCTCCGCAACGTTGGTC GTGGACCGATTCACTCGTGTTGCATTAAGGGACGAAGAGAATCTGATTTG GGTGGAAGACACTCAACCGGGTTCAAATTTCC
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Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig110:77476..81557-

>mRNA_E-siliculosus-1a_F_contig110.693.1 ID=mRNA_E-siliculosus-1a_F_contig110.693.1|Name=mRNA_E-siliculosus-1a_F_contig110.693.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=1926bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig110:77476..81557- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
ATGGCGGGTTTCTTCATTTCGTGCGTGGTATTGGCCACTGCGGTGTTTTG
CGGACGCTCGGCAGCGGAGGAGGTGGCCCCTGGACCTGCGGTGTCCAGAC
GGCTTCCGGCGATTACACCCAAGGCAACATGCGCCGACTGGATGAAGTGG
ATACCTCCTCGCTCGGACCCCGCGATCGTGATGCAAATGGCGGGTTTCTT
CATTTCGTGCGTGGTATTGGCCACTGCGGTGTTTTGCGGACGCTCGGCAG
CGGAGGAGGTGGCCCCTGGACCTGCGGTGTCCAGACGGCTTCCGGCGATT
ACACCCAAGGCAACATGCGCCGACTGGATGAAGTGGATACCTCCTCGCTC
GGACCCCGCGATCGTGATGCAAGTTGTGAGCAGGCACTACTTGGAATTGG
AGCGAAATTTTATTCGGCTGATGGAGCTCAACTCGGCCTTGACCCGCGAC
CACCTATACCTCATGTGTATGGACAACGTGTCGGTGCACTTCTTCGAATC
TTCCATGAACATCCGCTGCATTCCTCTTACCGCGTTCGACTTCCCGTCCC
ATGCGGAGATCTGGGTTTTGAGGGCCCGTGTGGTGTCTTGTCTGGTTGTG
AGCAGGCACTACTTGGAATTGGAGCGAAATTTTATTCGGCTGATGGAGCT
CAACTCGGCCTTGACCCGCGACCACCTATACCTCATGTGTATGGACAACG
TGTCGGTGCACTTCTTCGAATCTTCCATGAACATCCGCTGCATTCCTCTT
ACCGCGTTCGACTTCCCGTCCCATGCGGAGATCTGGGTTTTGAGGGCCCG
TGTGGTGTCTTGTCTGGTGGAAGCGGGCCAAGATGTGATAATGTCCGATG
CAGATGCTCTGTGGCTGGACGACCCGTTCAAGGATTTCAACCTTCCTCGC
GTAATCGACAGCAGCGTCGTCGCGTCTAGGGGGAAATTCCCCAAGCCGCT
TGGTCTAGAATGGGGGGCGACGATGTGCATGGGTTTTGTTCTTTTTCGAG
CGACCGGGAGAGGGGTTGTCGGAGAATTCCTCGAAGTCATGGATGCCCTG
GTTCACAAGAACAAGGACGATCAGATCTCGGTGGAAGCGGGCCAAGATGT
GATAATGTCCGATGCAGATGCTCTGTGGCTGGACGACCCGTTCAAGGATT
TCAACCTTCCTCGCGTAATCGACAGCAGCGTCGTCGCGTCTAGGGGGAAA
TTCCCCAAGCCGCTTGGTCTAGAATGGGGGGCGACGATGTGCATGGGTTT
TGTTCTTTTTCGAGCGACCGGGAGAGGGGTTGTCGGAGAATTCCTCGAAG
TCATGGATGCCCTGGTTCACAAGAACAAGGACGATCAGATCTCGGTTAAT
CTGGCGGCCGAGAACCTGGGGATAGTGTGGGATCAGGAGAGCGACATGCG
CTACGTAGAGAGTGACTCTTTCGGCTTCGGGACCATTGACACTCTTGTCG
ACGAAAACAATCAGCCATTCTCGGTGACGTTACTGCCGCACAACGCGTAC
ACCCGTGTCTGCGACGAGACACCAATTTCCAACAAAACTGTCGTGGCGCA
TTGTTGGGCACCTAAGACAGCTGACAGCAAGACTGGTTGGATGGTGCAAT
CTAAGCTCTGGTTCAGTGACAATGAAACACGCTGAGTTAATCTGGCGGCC
GAGAACCTGGGGATAGTGTGGGATCAGGAGAGCGACATGCGCTACGTAGA
GAGTGACTCTTTCGGCTTCGGGACCATTGACACTCTTGTCGACGAAAACA
ATCAGCCATTCTCGGTGACGTTACTGCCGCACAACGCGTACACCCGTGTC
TGCGACGAGACACCAATTTCCAACAAAACTGTCGTGGCGCATTGTTGGGC
ACCTAAGACAGCTGACAGCAAGACTGGTTGGATGGTGCAATCTAAGCTCT
GGTTCAGTGACAATGAAACACGCTGA
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