prot_E-siliculosus-1a_F_contig1099.676.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig1099.676.1
Unique Nameprot_E-siliculosus-1a_F_contig1099.676.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length306
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1099.676.1 vs. uniprot
Match: D7FZ07_ECTSI (RanBP2-type domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FZ07_ECTSI)

HSP 1 Score: 396 bits (1018), Expect = 4.710e-136
Identity = 247/257 (96.11%), Postives = 247/257 (96.11%), Query Frame = 0
Query:    1 MSEGEAYDPAAAAVPAGGRXXXXXXXXXXXXXXXXXXXXXXGIAELDASMGRGAPVPPAGGGGKPLPKKEQKDFRGPAGLFKKGDWTCTACGNVNWERRATCNKCNNPKPNLATTDEAREGLGGGFNERQDRASVATVEVDEDGFDDFGRKKIKARADKKAKEDAALARLRKSFGGGILGGTSLAPVGKPPVPGQFDDASPAPSVTTYDKFGRPRLAGGGRNXXXXXXXXXXXXXXXXXX-----GDRDGRGGDHRD 252
            MSEGEAYDPAAAAVPAGGRXXXXXXXXXXXXXXXXXXXX  GIAELDASMGRGAPVPPAGGGGKPL KKEQKDFRGPAGLFKKGDWTCTACGNVNWERRATCNKCNNPKPNLA TDEAREGLGGGFNERQDRASVATVEVDEDGFDDFGRKKIKARADKKAKEDAALARLRKSFGGGILGGTSLAPVGKPPV GQFDDASPAPSVTTYDKFGRPRLAGGGRNXXXXXXXXXXXXXXXXXX     GDRDGRGGDHRD
Sbjct:    1 MSEGEAYDPAAAAVPAGGRXXXXXXXXXXXXXXXXXXXXIAGIAELDASMGRGAPVPPAGGGGKPLLKKEQKDFRGPAGLFKKGDWTCTACGNVNWERRATCNKCNNPKPNLAATDEAREGLGGGFNERQDRASVATVEVDEDGFDDFGRKKIKARADKKAKEDAALARLRKSFGGGILGGTSLAPVGKPPVRGQFDDASPAPSVTTYDKFGRPRLAGGGRNXXXXXXXXXXXXXXXXXXXXXXXGDRDGRGGDHRD 257          
BLAST of mRNA_E-siliculosus-1a_F_contig1099.676.1 vs. uniprot
Match: A0A7S2CIC2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2CIC2_9STRA)

HSP 1 Score: 140 bits (353), Expect = 2.040e-37
Identity = 69/103 (66.99%), Postives = 78/103 (75.73%), Query Frame = 0
Query:   73 DFRGPAGLFKKGDWTCTACGNVNWERRATCNKCNNPKPNLATTDEAREGLGGGFNERQDRASVATVEVDEDGFDDFGRKKIKARADKKAKEDAALARLRKSFG 175
            D RGPAGLF   DW C  CGNVNW RR+TCN CN  KP+LA  D+AREGLGGGF ERQ++AS++TVEV EDG+DDFGRK      DK AKE AALARL  S+G
Sbjct:   25 DHRGPAGLFVAADWDCPGCGNVNWARRSTCNMCNTKKPDLADPDDAREGLGGGFLERQEQASLSTVEVAEDGYDDFGRKIKSKNKDKAAKEAAALARLTASYG 127          
BLAST of mRNA_E-siliculosus-1a_F_contig1099.676.1 vs. uniprot
Match: A0A4D9D5Z5_9STRA (RanBP2-type domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D5Z5_9STRA)

HSP 1 Score: 139 bits (350), Expect = 1.110e-36
Identity = 69/109 (63.30%), Postives = 83/109 (76.15%), Query Frame = 0
Query:   69 KEQKDF-RGPAGLFKKGDWTCTACGNVNWERRATCNKCNNPKPNLATTDEAREGLGGGFNERQDRASVA-TVEVDEDGFDDFGRKKIKARADKKAKEDAALARLRKSFG 175
            +E+ DF +GP GLFK  DW C +CGNVNWERR  CN C   KP LA + EAREGLGGGF ERQ+R +++  VEV EDGFDDFGRKK K + D+KAKE AALARL+ ++G
Sbjct:   92 REEMDFSKGPPGLFKASDWNCPSCGNVNWERREFCNMCGGKKPTLAGSGEAREGLGGGFLERQERGAISQAVEVGEDGFDDFGRKKAKEKVDRKAKEMAALARLKATYG 200          
BLAST of mRNA_E-siliculosus-1a_F_contig1099.676.1 vs. uniprot
Match: A0A7S2WNS0_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WNS0_9STRA)

HSP 1 Score: 135 bits (340), Expect = 1.760e-34
Identity = 72/126 (57.14%), Postives = 80/126 (63.49%), Query Frame = 0
Query:   51 GRGAPVPPAGGGGKPLPKKEQKDFRGPAGLFKKGDWTCTACGNVNWERRATCNKCNNPKPNLATTDEAREGLGGGFNERQDRASVATVEVDEDGFDDFGRKKIKARADKKAKEDAALARLRKSFGG 176
            G G P    GG G         DFRGP GLF K DW C  CGNVNW RR+ CN C   KP+ A  DE R+GLGGGF ERQ+RAS   VEV +DGFDDFGRK  +  ++K AKE AALARL  SF G
Sbjct:    7 GAGPPGAGRGGRGXXXXXGRGADFRGPPGLFVKADWDCNGCGNVNWARRSHCNMCGQAKPSTAGPDEQRDGLGGGFLERQERASSTQVEVADDGFDDFGRKAKQRASNKSAKEAAALARLNASFTG 132          
BLAST of mRNA_E-siliculosus-1a_F_contig1099.676.1 vs. uniprot
Match: F0WQ51_9STRA (2-(3-amino-3-carboxypropyl)histidine synthase subunit 1 n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WQ51_9STRA)

HSP 1 Score: 138 bits (347), Expect = 4.590e-33
Identity = 64/102 (62.75%), Postives = 75/102 (73.53%), Query Frame = 0
Query:   73 DFRGPAGLFKKGDWTCTACGNVNWERRATCNKCNNPKPNLATTDEAREGLGGGFNERQDRASVATVEVDEDGFDDFGRKKIKARADKKAKEDAALARLRKSF 174
            DFRGP GLFK GDWTCT CGNVNWERR  CN C N KP +   DE R+G+ GGFNERQ+R + A  E+ EDG+DDFG KK K  A K  +E AALARL++S+
Sbjct:   64 DFRGPPGLFKPGDWTCTVCGNVNWERRQECNICKNAKPGMPGVDERRDGVAGGFNERQERVASAKAEIGEDGYDDFGMKKKKINASKTQREAAALARLQQSY 165          
BLAST of mRNA_E-siliculosus-1a_F_contig1099.676.1 vs. uniprot
Match: A0A8K1CMJ3_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CMJ3_PYTOL)

HSP 1 Score: 130 bits (327), Expect = 8.490e-33
Identity = 61/99 (61.62%), Postives = 73/99 (73.74%), Query Frame = 0
Query:   76 GPAGLFKKGDWTCTACGNVNWERRATCNKCNNPKPNLATTDEAREGLGGGFNERQDRASVATVEVDEDGFDDFGRKKIKARADKKAKEDAALARLRKSF 174
            GP GLFK GDW C  CGNVNWERR  CN C   KP ++  DE R+G+GGGFNERQ+R + A  EVDEDG+DDFG KK K +A K  +E AALARL++S+
Sbjct:   64 GPPGLFKAGDWACLTCGNVNWERRNECNICKGSKPGMSGLDEKRDGIGGGFNERQERVASAKKEVDEDGYDDFGVKKKKVKASKAEREAAALARLKQSY 162          
BLAST of mRNA_E-siliculosus-1a_F_contig1099.676.1 vs. uniprot
Match: A0A024GHB5_9STRA (2-(3-amino-3-carboxypropyl)histidine synthase subunit 1 n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024GHB5_9STRA)

HSP 1 Score: 136 bits (343), Expect = 2.400e-32
Identity = 63/102 (61.76%), Postives = 75/102 (73.53%), Query Frame = 0
Query:   73 DFRGPAGLFKKGDWTCTACGNVNWERRATCNKCNNPKPNLATTDEAREGLGGGFNERQDRASVATVEVDEDGFDDFGRKKIKARADKKAKEDAALARLRKSF 174
            DFRGP GLFK GDWTCT CGNVNWERR  CN C N KP +   DE R+G+ GGFNERQ+R + A  E+ EDG+DDFG +K K  A K  +E AALARL++S+
Sbjct:   67 DFRGPPGLFKPGDWTCTVCGNVNWERRQECNICKNAKPGMPGADERRDGVAGGFNERQERVASAKAEIGEDGYDDFGMRKKKLNASKTQREVAALARLQQSY 168          
BLAST of mRNA_E-siliculosus-1a_F_contig1099.676.1 vs. uniprot
Match: H3HB99_PHYRM (RanBP2-type domain-containing protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3HB99_PHYRM)

HSP 1 Score: 129 bits (324), Expect = 1.190e-30
Identity = 73/148 (49.32%), Postives = 90/148 (60.81%), Query Frame = 0
Query:   55 PVPPAGGGGKPLPKKEQKDFRGPAGLFKKGDWTCTACGNVNWERRATCNKCNNPKPNLATTDEAREGLGGGFNERQDRASVATVEVDEDGFDDFG-RKKI--------------------KARADKKAKEDAALARLRKSF--GGGIL 179
            P P   GG KP P     D RGP GLF+ GDWTC  CGNVNWERR  CN C + KP ++  DE R+G GGGFNERQ+RA+ A  E+D+DG+DDFG RKK+                    K +A K  +E AALARL++S+  GG I+
Sbjct:  287 PRPEGLGGEKPKPTSA--DVRGPPGLFQPGDWTCNTCGNVNWERRNECNMCKSSKPGMSGLDEKRDGAGGGFNERQERAASAKAEIDDDGYDDFGMRKKVQDLQRTILDKELTELLYLLQKVKASKAEREAAALARLQQSYRCGGEIV 432          
BLAST of mRNA_E-siliculosus-1a_F_contig1099.676.1 vs. uniprot
Match: A0A835YR36_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YR36_9STRA)

HSP 1 Score: 113 bits (283), Expect = 8.410e-25
Identity = 60/98 (61.22%), Postives = 70/98 (71.43%), Query Frame = 0
Query:   83 KGDWTCTACGNVNWERRATCNKCNNPKP-NLATTDEAREGLGGGFNERQDRASVATVEVDEDGFDDFGRKKIKARADKKAKEDAALARLRKSFGGGIL 179
            + DWTC  CGNVNW  R  CN C   KP  L   DE R+GLGGGFNERQDRAS+ATVEV EDG+DDFGRK  KA+AD++  E AAL RL ++F  G +
Sbjct:  150 QADWTCD-CGNVNWGWRQECNLCQASKPATLVGPDEVRDGLGGGFNERQDRASLATVEVGEDGYDDFGRKIKKAKADRRVLELAALNRLEQAFSSGAM 246          
BLAST of mRNA_E-siliculosus-1a_F_contig1099.676.1 vs. uniprot
Match: A0A2P6TQR3_CHLSO (RNA-binding cabeza n=1 Tax=Chlorella sorokiniana TaxID=3076 RepID=A0A2P6TQR3_CHLSO)

HSP 1 Score: 101 bits (251), Expect = 3.840e-20
Identity = 59/122 (48.36%), Postives = 74/122 (60.66%), Query Frame = 0
Query:   62 GGKPLPKKE--QKDFRGPAGLFKKGDWTCTACGNVNWERRATCNKCNNPKPNLATTDEAREGLGGGFNERQDRASVATV------EVDEDGFDDFGR-KKIKARADKKAKEDAALARLRKSF 174
            GG   P+ E  +   +GP G F  GDWTCT CGNVNW+RR TCN+CN PKP     D+ REG GGGF ER D             E +ED FD+FGR +K ++ AD++A+E AAL RL   +
Sbjct:  690 GGYSAPRSEPVRAAPQGPPGKFAPGDWTCTGCGNVNWQRRTTCNQCNAPKP--GAVDQTREGRGGGFKERDDXXXXXXXXXXXEHEANED-FDEFGRPRKKESAADREARERAALDRLNARY 808          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1099.676.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FZ07_ECTSI4.710e-13696.11RanBP2-type domain-containing protein n=2 Tax=Ecto... [more]
A0A7S2CIC2_9STRA2.040e-3766.99Hypothetical protein (Fragment) n=1 Tax=Florenciel... [more]
A0A4D9D5Z5_9STRA1.110e-3663.30RanBP2-type domain-containing protein n=1 Tax=Nann... [more]
A0A7S2WNS0_9STRA1.760e-3457.14Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
F0WQ51_9STRA4.590e-3362.752-(3-amino-3-carboxypropyl)histidine synthase subu... [more]
A0A8K1CMJ3_PYTOL8.490e-3361.62Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A024GHB5_9STRA2.400e-3261.762-(3-amino-3-carboxypropyl)histidine synthase subu... [more]
H3HB99_PHYRM1.190e-3049.32RanBP2-type domain-containing protein n=1 Tax=Phyt... [more]
A0A835YR36_9STRA8.410e-2561.22Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A2P6TQR3_CHLSO3.840e-2048.36RNA-binding cabeza n=1 Tax=Chlorella sorokiniana T... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001876Zinc finger, RanBP2-typeSMARTSM00547zf_4coord: 84..108
e-value: 1.3E-5
score: 34.7
IPR001876Zinc finger, RanBP2-typePROSITEPS01358ZF_RANBP2_1coord: 86..105
IPR001876Zinc finger, RanBP2-typePROSITEPS50199ZF_RANBP2_2coord: 82..111
score: 10.308
NoneNo IPR availableGENE3D4.10.1060.10coord: 69..113
e-value: 1.3E-12
score: 48.7
NoneNo IPR availablePANTHERPTHR12999FAMILY NOT NAMEDcoord: 15..176
IPR036443Zinc finger, RanBP2-type superfamilySUPERFAMILY90209Ran binding protein zinc finger-likecoord: 74..111

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig1099contigE-siliculosus-1a_F_contig1099:24686..27629 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig1099.676.1mRNA_E-siliculosus-1a_F_contig1099.676.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig1099 24510..28091 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig1099.676.1 ID=prot_E-siliculosus-1a_F_contig1099.676.1|Name=mRNA_E-siliculosus-1a_F_contig1099.676.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=306bp
MSEGEAYDPAAAAVPAGGRGDGGGRGRGRGRGRGGGGVAIAGIAELDASM
GRGAPVPPAGGGGKPLPKKEQKDFRGPAGLFKKGDWTCTACGNVNWERRA
TCNKCNNPKPNLATTDEAREGLGGGFNERQDRASVATVEVDEDGFDDFGR
KKIKARADKKAKEDAALARLRKSFGGGILGGTSLAPVGKPPVPGQFDDAS
PAPSVTTYDKFGRPRLAGGGRNGGGGGGDNGVSAAAAASGGDRDGRGGDH
RDRDRDRRDSRDKDRRRGARSRSRSRSRERSSRDDKDRSRRRRSRSRSRD
RDRRR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036443Znf_RanBP2_sf
IPR001876Znf_RanBP2