prot_E-siliculosus-1a_F_contig1094.651.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig1094.651.1
Unique Nameprot_E-siliculosus-1a_F_contig1094.651.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length265
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1094.651.1 vs. uniprot
Match: D8LP04_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LP04_ECTSI)

HSP 1 Score: 478 bits (1231), Expect = 3.520e-170
Identity = 242/246 (98.37%), Postives = 244/246 (99.19%), Query Frame = 0
Query:   19 MRALAVLTLAAAAVPLNAQFGMPPKPKSEPVKGDLAAIKCGVCQGLAEHLYEKVAEMREAAPFGKVHEDDISTVIEGACDPTTKEGRWITEYDIVEEGGYLELKKQDSFSHCKEECETIAKSCTVLVDDELDVEEVVVALWKNKLGLSELQKAACGEWSDRCSGKKRVKAPKDRQDYEFEPKTAKDFEVAEAMERLQNSMGGXXXPGIYGPDDLAAMDAMMSXXGDMGQDPFADDFDMGGMGGMEF 264
            MRALAVLTLAAAA+PLNAQFGMPPKPKS+PVKGDLAAIKCGVCQGLAEHLYEKVAEMREAAPFGKVHEDDISTVIEGACDP TKEGRWITEYDIVEEGGYLELKKQDSFSHCKEECETIAKSCTVLVDDELDVEEVVVALWKNKLGLSELQKAACGEWSDRCSGKKRVKAPKDRQDYEFEPKTAKDFEVAEAMERLQNSMGGXXXPGIYGPDDLAAMDAMMS XGDMGQDPFADDFDMGGMGGMEF
Sbjct:    1 MRALAVLTLAAAAIPLNAQFGMPPKPKSDPVKGDLAAIKCGVCQGLAEHLYEKVAEMREAAPFGKVHEDDISTVIEGACDPATKEGRWITEYDIVEEGGYLELKKQDSFSHCKEECETIAKSCTVLVDDELDVEEVVVALWKNKLGLSELQKAACGEWSDRCSGKKRVKAPKDRQDYEFEPKTAKDFEVAEAMERLQNSMGGXXXPGIYGPDDLAAMDAMMSQXGDMGQDPFADDFDMGGMGGMEF 246          
BLAST of mRNA_E-siliculosus-1a_F_contig1094.651.1 vs. uniprot
Match: A0A7S3B357_9EUKA (Hypothetical protein n=1 Tax=Haptolina ericina TaxID=156174 RepID=A0A7S3B357_9EUKA)

HSP 1 Score: 86.3 bits (212), Expect = 1.820e-16
Identity = 69/229 (30.13%), Postives = 106/229 (46.29%), Query Frame = 0
Query:   24 VLTLAAAAVPLNAQFG-MPPKPKSEPVKGDLAAIKCGVCQGLAEHLYEKVAEMREAAPFGKVH-------------EDDISTVIEGACDPTTKEGRWITEYDIVEEGGYLELKKQ---DSFSH-CKEECETIAKSCTVLVDDELDVEEVVVALWKNKLGLSELQKAACGEWSDRCSGKKRVKAP--KDRQDYEFEPKTAKDFEVAEAMERLQN--SMGGXXXPGIYGPD 230
            VL L A    ++AQ   +P KPKS P+  DL  I+C VC+ +     E+  +   AA  G+               E  +  V+   C+  +KEG+W++ YD+V+ G  L L+ Q   D     C+ EC TI K+C  +++   D+ E++V   K       L +  C + +  C   K    P  K R++ EF+ KT KD +  E M  L+    MGG     + G D
Sbjct:    6 VLALCAT---VSAQMDQLPKKPKSAPINADLPYIRCQVCETMVAQALEQAKQAVVAAKPGQQQKRRFESSNSMGELESQMEDVVSNVCNAESKEGKWLSSYDVVKRGSALRLENQVHGDVVGGVCRRECRTIEKACVGILEAVDDMPELLVEAAKAGTSSGMLGQRVCKKLTGVCKKGKTPVWPEGKVRRNEEFKAKTKKDADTEELMATLKGMPGMGGGGLTMMSGDD 231          
BLAST of mRNA_E-siliculosus-1a_F_contig1094.651.1 vs. uniprot
Match: A0A7S2CPR7_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2CPR7_9STRA)

HSP 1 Score: 73.9 bits (180), Expect = 1.120e-11
Identity = 62/215 (28.84%), Postives = 90/215 (41.86%), Query Frame = 0
Query:   43 KPKSEPV--KGDLAAIKCGVCQGLAEHLYEKVAEMREAAPFGKV-------------HEDDISTVIEGACDPTTKEGRWITEYDIVEE------------------------GGYLELKKQ-DSFSHCKEECETIAKSCTVLVDDELDVEEVVVALWKNKLGLSELQKAACGEWSDRCSGKKRVKAPKDRQDYEFEPKTAKDFEVAEAMERLQNS 217
            K   EPV  K DL  I C VC+ + E + E   E R  AP   V              ED++  ++   C    K G W+   D+VE                         G YL ++   D +     E  T+ +SC  L +D +DV+E+ VALWK +L  + L    C E S+ C  K R K   +R D  FE   A+  E  + M+ +++S
Sbjct:   38 KRDKEPVFDKYDLKLIGCDVCRFVVEQVREATEEKRAEAPIVSVAVRPGKKERRSSFSEDEVQEILGDVCHRKKKVGAWLWRTDLVEHTAKSTKHNQSFVYRPITKSEKKNGGSYLLIEHHPDYYGVWDREKATVQRSCERLFED-MDVDELSVALWKGELDEAALVSLTCEELSNSCGKKNRPKLMLERDDIAFEVTDAQLVETEQMMQSMEDS 251          
BLAST of mRNA_E-siliculosus-1a_F_contig1094.651.1 vs. uniprot
Match: A0A7R9U4H7_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U4H7_9STRA)

HSP 1 Score: 70.9 bits (172), Expect = 7.480e-11
Identity = 55/166 (33.13%), Postives = 82/166 (49.40%), Query Frame = 0
Query:   52 DLAAIKCGVCQGLAEHLYEKVAEMREAAPFGKVHEDDISTVIEGACDPTTKEGRWITEYDIVEEGG----------------YLELKKQDSF-SHCKEECETIAKSCTVLVDDE-LDVEEVVVALWKNKLGLSELQKAACGEWSDRCSGKKRVKAPKD--RQDYEF 197
            +L  I+CG C+ +   +Y   A+ R  A    V E  I       C      GRW+   DIVEE G                YL+L +Q S  + CKEEC+ +  SC  ++D++ LD+EEVV+A+++N+    ++Q   C +    C G   V  P+D  R+DYEF
Sbjct:   47 ELPYIRCGTCRWMVSVVYALTAQDR--AQGKAVDELTIDEHASKLCKDRALPGRWMRHLDIVEEEGPLKYSSAEEKNQPRPRYLKLVEQWSGRAECKEECKVLRLSCQEVMDEDYLDMEEVVLAMYRNETATKDIQDQLCAK---ACKGAP-VPLPQDFTREDYEF 206          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1094.651.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D8LP04_ECTSI3.520e-17098.37Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A7S3B357_9EUKA1.820e-1630.13Hypothetical protein n=1 Tax=Haptolina ericina Tax... [more]
A0A7S2CPR7_9STRA1.120e-1128.84Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A7R9U4H7_9STRA7.480e-1133.13Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR36058FAMILY NOT NAMEDcoord: 16..244
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 21..32
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..36
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..20
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 37..264
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 33..36

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig1094contigE-siliculosus-1a_F_contig1094:26167..30974 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig1094.651.1mRNA_E-siliculosus-1a_F_contig1094.651.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig1094 25650..30974 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig1094.651.1 ID=prot_E-siliculosus-1a_F_contig1094.651.1|Name=mRNA_E-siliculosus-1a_F_contig1094.651.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=265bp
LLCAVLNLSWPLSRRVYTMRALAVLTLAAAAVPLNAQFGMPPKPKSEPVK
GDLAAIKCGVCQGLAEHLYEKVAEMREAAPFGKVHEDDISTVIEGACDPT
TKEGRWITEYDIVEEGGYLELKKQDSFSHCKEECETIAKSCTVLVDDELD
VEEVVVALWKNKLGLSELQKAACGEWSDRCSGKKRVKAPKDRQDYEFEPK
TAKDFEVAEAMERLQNSMGGMGGPGIYGPDDLAAMDAMMSQMGDMGQDPF
ADDFDMGGMGGMEF*
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