mRNA_E-siliculosus-1a_F_contig1094.651.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-siliculosus-1a_F_contig1094.651.1
Unique NamemRNA_E-siliculosus-1a_F_contig1094.651.1
TypemRNA
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Homology
[Close]
BLAST of mRNA_E-siliculosus-1a_F_contig1094.651.1 vs. uniprot
Match: D8LP04_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LP04_ECTSI)

HSP 1 Score: 480 bits (1236), Expect = 4.640e-168
Identity = 242/246 (98.37%), Postives = 244/246 (99.19%), Query Frame = 1 
Query:   55 MRALAVLTLAAAAVPLNAQFGMPPKPKSEPVKGDLAAIKCGVCQGLAEHLYEKVAEMREAAPFGKVHEDDISTVIEGACDPTTKEGRWITEYDIVEEGGYLELKKQDSFSHCKEECETIAKSCTVLVDDELDVEEVVVALWKNKLGLSELQKAACGEWSDRCSGKKRVKAPKDRQDYEFEPKTAKDFEVAEAMERLQNSMGGXXXPGIYGPDDLAAMDAMMSXXGDMGQDPFADDFDMGGMGGMEF 792
            MRALAVLTLAAAA+PLNAQFGMPPKPKS+PVKGDLAAIKCGVCQGLAEHLYEKVAEMREAAPFGKVHEDDISTVIEGACDP TKEGRWITEYDIVEEGGYLELKKQDSFSHCKEECETIAKSCTVLVDDELDVEEVVVALWKNKLGLSELQKAACGEWSDRCSGKKRVKAPKDRQDYEFEPKTAKDFEVAEAMERLQNSMGGXXXPGIYGPDDLAAMDAMMS XGDMGQDPFADDFDMGGMGGMEF
Sbjct:    1 MRALAVLTLAAAAIPLNAQFGMPPKPKSDPVKGDLAAIKCGVCQGLAEHLYEKVAEMREAAPFGKVHEDDISTVIEGACDPATKEGRWITEYDIVEEGGYLELKKQDSFSHCKEECETIAKSCTVLVDDELDVEEVVVALWKNKLGLSELQKAACGEWSDRCSGKKRVKAPKDRQDYEFEPKTAKDFEVAEAMERLQNSMGGXXXPGIYGPDDLAAMDAMMSQXGDMGQDPFADDFDMGGMGGMEF 246
[Close]
BLAST of mRNA_E-siliculosus-1a_F_contig1094.651.1 vs. uniprot
Match: A0A7S3B357_9EUKA (Hypothetical protein n=1 Tax=Haptolina ericina TaxID=156174 RepID=A0A7S3B357_9EUKA)

HSP 1 Score: 86.3 bits (212), Expect = 1.530e-15
Identity = 69/229 (30.13%), Postives = 106/229 (46.29%), Query Frame = 1 
Query:   70 VLTLAAAAVPLNAQFG-MPPKPKSEPVKGDLAAIKCGVCQGLAEHLYEKVAEMREAAPFGKVH-------------EDDISTVIEGACDPTTKEGRWITEYDIVEEGGYLELKKQ---DSFSH-CKEECETIAKSCTVLVDDELDVEEVVVALWKNKLGLSELQKAACGEWSDRCSGKKRVKAP--KDRQDYEFEPKTAKDFEVAEAMERLQN--SMGGXXXPGIYGPD 690
            VL L A    ++AQ   +P KPKS P+  DL  I+C VC+ +     E+  +   AA  G+               E  +  V+   C+  +KEG+W++ YD+V+ G  L L+ Q   D     C+ EC TI K+C  +++   D+ E++V   K       L +  C + +  C   K    P  K R++ EF+ KT KD +  E M  L+    MGG     + G D
Sbjct:    6 VLALCAT---VSAQMDQLPKKPKSAPINADLPYIRCQVCETMVAQALEQAKQAVVAAKPGQQQKRRFESSNSMGELESQMEDVVSNVCNAESKEGKWLSSYDVVKRGSALRLENQVHGDVVGGVCRRECRTIEKACVGILEAVDDMPELLVEAAKAGTSSGMLGQRVCKKLTGVCKKGKTPVWPEGKVRRNEEFKAKTKKDADTEELMATLKGMPGMGGGGLTMMSGDD 231
[Close]
BLAST of mRNA_E-siliculosus-1a_F_contig1094.651.1 vs. uniprot
Match: A0A7S2CPR7_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2CPR7_9STRA)

HSP 1 Score: 73.9 bits (180), Expect = 5.830e-11
Identity = 62/215 (28.84%), Postives = 90/215 (41.86%), Query Frame = 1 
Query:  127 KPKSEPV--KGDLAAIKCGVCQGLAEHLYEKVAEMREAAPFGKV-------------HEDDISTVIEGACDPTTKEGRWITEYDIVEE------------------------GGYLELKKQ-DSFSHCKEECETIAKSCTVLVDDELDVEEVVVALWKNKLGLSELQKAACGEWSDRCSGKKRVKAPKDRQDYEFEPKTAKDFEVAEAMERLQNS 651
            K   EPV  K DL  I C VC+ + E + E   E R  AP   V              ED++  ++   C    K G W+   D+VE                         G YL ++   D +     E  T+ +SC  L +D +DV+E+ VALWK +L  + L    C E S+ C  K R K   +R D  FE   A+  E  + M+ +++S
Sbjct:   38 KRDKEPVFDKYDLKLIGCDVCRFVVEQVREATEEKRAEAPIVSVAVRPGKKERRSSFSEDEVQEILGDVCHRKKKVGAWLWRTDLVEHTAKSTKHNQSFVYRPITKSEKKNGGSYLLIEHHPDYYGVWDREKATVQRSCERLFED-MDVDELSVALWKGELDEAALVSLTCEELSNSCGKKNRPKLMLERDDIAFEVTDAQLVETEQMMQSMEDS 251
[Close]
BLAST of mRNA_E-siliculosus-1a_F_contig1094.651.1 vs. uniprot
Match: A0A7R9U4H7_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U4H7_9STRA)

HSP 1 Score: 70.9 bits (172), Expect = 3.220e-10
Identity = 55/166 (33.13%), Postives = 82/166 (49.40%), Query Frame = 1 
Query:  154 DLAAIKCGVCQGLAEHLYEKVAEMREAAPFGKVHEDDISTVIEGACDPTTKEGRWITEYDIVEEGG----------------YLELKKQDSF-SHCKEECETIAKSCTVLVDDE-LDVEEVVVALWKNKLGLSELQKAACGEWSDRCSGKKRVKAPKD--RQDYEF 591
            +L  I+CG C+ +   +Y   A+ R  A    V E  I       C      GRW+   DIVEE G                YL+L +Q S  + CKEEC+ +  SC  ++D++ LD+EEVV+A+++N+    ++Q   C +    C G   V  P+D  R+DYEF
Sbjct:   47 ELPYIRCGTCRWMVSVVYALTAQDR--AQGKAVDELTIDEHASKLCKDRALPGRWMRHLDIVEEEGPLKYSSAEEKNQPRPRYLKLVEQWSGRAECKEECKVLRLSCQEVMDEDYLDMEEVVLAMYRNETATKDIQDQLCAK---ACKGAP-VPLPQDFTREDYEF 206
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1094.651.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D8LP04_ECTSI4.640e-16898.37Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A7S3B357_9EUKA1.530e-1530.13Hypothetical protein n=1 Tax=Haptolina ericina Tax... [more]
A0A7S2CPR7_9STRA5.830e-1128.84Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A7R9U4H7_9STRA3.220e-1033.13Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig1094contigE-siliculosus-1a_F_contig1094:25650..30974 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-19
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Properties
Property NameValue
Start0
Stop1
Cds size795
Model size1314
Exons7
Ec32 orthologEc-06_007090.1
Ec32 ortholog descriptionconserved unknown protein
Hectar predicted targeting categorysignal peptide
Best eggNOG OGNA|NA|NA
Best tax levelEukaryota
EggNOG OGs28MTK@1,2QUBV@2759
Seed eggNOG ortholog2880.D8LP04
Seed ortholog evalue2e-133
Seed ortholog score481.9
Taxonomic scopeEukaryota
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig1094.651.1prot_E-siliculosus-1a_F_contig1094.651.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalepolypeptideE-siliculosus-1a_F_contig1094 26167..30974 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927596.9971182-UTR-E-siliculosus-1a_F_contig1094:25649..261661622927596.9971182-UTR-E-siliculosus-1a_F_contig1094:25649..26166Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig1094 25650..26166 -
1696318603.8598363-UTR-E-siliculosus-1a_F_contig1094:25649..261661696318603.8598363-UTR-E-siliculosus-1a_F_contig1094:25649..26166Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig1094 25650..26166 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927597.0432148-CDS-E-siliculosus-1a_F_contig1094:26166..262971622927597.0432148-CDS-E-siliculosus-1a_F_contig1094:26166..26297Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1094 26167..26297 -
1696318603.8726215-CDS-E-siliculosus-1a_F_contig1094:26166..262971696318603.8726215-CDS-E-siliculosus-1a_F_contig1094:26166..26297Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1094 26167..26297 -
1622927597.0600116-CDS-E-siliculosus-1a_F_contig1094:27228..273941622927597.0600116-CDS-E-siliculosus-1a_F_contig1094:27228..27394Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1094 27229..27394 -
1696318603.883353-CDS-E-siliculosus-1a_F_contig1094:27228..273941696318603.883353-CDS-E-siliculosus-1a_F_contig1094:27228..27394Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1094 27229..27394 -
1622927597.0780258-CDS-E-siliculosus-1a_F_contig1094:28132..282131622927597.0780258-CDS-E-siliculosus-1a_F_contig1094:28132..28213Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1094 28133..28213 -
1696318603.8972583-CDS-E-siliculosus-1a_F_contig1094:28132..282131696318603.8972583-CDS-E-siliculosus-1a_F_contig1094:28132..28213Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1094 28133..28213 -
1622927597.099546-CDS-E-siliculosus-1a_F_contig1094:28645..287201622927597.099546-CDS-E-siliculosus-1a_F_contig1094:28645..28720Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1094 28646..28720 -
1696318603.9097564-CDS-E-siliculosus-1a_F_contig1094:28645..287201696318603.9097564-CDS-E-siliculosus-1a_F_contig1094:28645..28720Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1094 28646..28720 -
1622927597.1152706-CDS-E-siliculosus-1a_F_contig1094:29368..294611622927597.1152706-CDS-E-siliculosus-1a_F_contig1094:29368..29461Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1094 29369..29461 -
1696318603.9217849-CDS-E-siliculosus-1a_F_contig1094:29368..294611696318603.9217849-CDS-E-siliculosus-1a_F_contig1094:29368..29461Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1094 29369..29461 -
1622927597.1326725-CDS-E-siliculosus-1a_F_contig1094:29898..299961622927597.1326725-CDS-E-siliculosus-1a_F_contig1094:29898..29996Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1094 29899..29996 -
1696318603.9292433-CDS-E-siliculosus-1a_F_contig1094:29898..299961696318603.9292433-CDS-E-siliculosus-1a_F_contig1094:29898..29996Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1094 29899..29996 -
1622927597.143613-CDS-E-siliculosus-1a_F_contig1094:30823..309741622927597.143613-CDS-E-siliculosus-1a_F_contig1094:30823..30974Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1094 30824..30974 -
1696318603.9366283-CDS-E-siliculosus-1a_F_contig1094:30823..309741696318603.9366283-CDS-E-siliculosus-1a_F_contig1094:30823..30974Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1094 30824..30974 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-siliculosus-1a_F_contig1094.651.1

>prot_E-siliculosus-1a_F_contig1094.651.1 ID=prot_E-siliculosus-1a_F_contig1094.651.1|Name=mRNA_E-siliculosus-1a_F_contig1094.651.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=265bp
LLCAVLNLSWPLSRRVYTMRALAVLTLAAAAVPLNAQFGMPPKPKSEPVK
GDLAAIKCGVCQGLAEHLYEKVAEMREAAPFGKVHEDDISTVIEGACDPT
TKEGRWITEYDIVEEGGYLELKKQDSFSHCKEECETIAKSCTVLVDDELD
VEEVVVALWKNKLGLSELQKAACGEWSDRCSGKKRVKAPKDRQDYEFEPK
TAKDFEVAEAMERLQNSMGGMGGPGIYGPDDLAAMDAMMSQMGDMGQDPF
ADDFDMGGMGGMEF*
back to top

mRNA from alignment at E-siliculosus-1a_F_contig1094:25650..30974-

Legend: polypeptideCDSUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-siliculosus-1a_F_contig1094.651.1 ID=mRNA_E-siliculosus-1a_F_contig1094.651.1|Name=mRNA_E-siliculosus-1a_F_contig1094.651.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=5325bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1094:25650..30974- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
CTGCTCTGCGCTGTGCTGAATCTCTCTTGGCCACTATCCCGTCGCGTGTA
CACTATGAGGGCGCTGGCAGTGTTGACTCTCGCGGCCGCGGCCGTCCCGC
TGAATGCCCAGTTCGGCATGCCGCCGAAGCCAAAGAGCGAACCAGTCAAA
GGTGAGTCGCCTGTGACTGCTGCTGTCGCATCCGCTCGCTCGATCTGCGA
TCCTTCTTTCCCACCTGTTTTTGCCGGTAGATTTGCGATAACGTCTCGCG
AGGGAGGCTGGTGCTGCTGAGCACGGTCGCAGCAGAAGAGGCGAGGAACT
CAGGTAGCAGCACGTCTTGTTGTATAGGACGGGATGTTAACGAGGTACAG
CAAAAGTTCGGGTCTTCTTTGACAGGGGTACGTTCTCTCGTCGGTCATCC
CGCACGACATGCCATGTGTCCTCGTGAGCCCCTCAGCTGGCGGATGAATT
CCCTTGGTTGGATGTCTTTAGCGGGGGGTTACTGAGAGAGATAGGCGAAG
GAATTCTCGCTGAGATCTTTCGGTTGTTGTAGCCGTCAGCGTGTGGACCA
AAAGTGGGAGAGACAACGGCAGAGTATAAAGTAGTCCACGTACATTAGAC
TCAAAGTACAACCATCAAACGTTCTCGAAAGCATCGACAACATCGTCTCT
GCCGACATCGTGGCCTCTTTGGTGGCGCAAAATTTCCAAGTTGATATACA
GATGTGTGCTGCACTTTTTCACTGAGTGCTGTGTCTTATTCTTGCCTCCA
TTGTACTGGGCCAAGCAATCGTAGTCTCTTTCTTGTGCGTGATGTGGTAC
GGACGTTCGCCGCTTGGTGCACGTCTCTTGTCCCCGCCGCCGCCGCCGCT
CGCATCGCCGTACACACACCTAGACTAGGCCCTCTTGCAGTCGTGGAGGC
ATGTTTCTGAGTAAATCCCTACCCCCTACCTGACTGAGTTTCTCTATATT
TTACTCGGTCTCCTTCTCTGTATTGCAGGCGACCTGGCCGCAATAAAGTG
CGGGGTCTGCCAAGGCCTGGCGGAGCACCTTTACGAGAAGGTGGCGGAGA
TGCGGGAGGCGGCGCCTTTCGGAAAGGTGTGCGTGTAGTTGACGACGTTG
TCTGTTGTTGTTGTTTGGTGCTGGTATCGTAGTGCCGTCCGTCCACACTC
TCGCTGCCCCGGCGCCGGGAAATCCACAGCAGTGCTGCAAATATATTGAT
GGATCGGACGACCGCCGCCGCGGGGGTCATGAGTCCCTCGTCTTTTGTCC
GTGGGACTCCTCTTCTCGATGTGTTCAATTTCTCCGCATTCTGCCTGCAT
CTGGCGTGCGTGCATACCAACTCGTCGTTACCGAGCTCCGTTTCCAAAGA
AAAGGGAAGTGCTGCTGGTACCATCATACTGCTTTTCTGTTTTTTGTCTG
TGGTGTGGGTCTCGTGACCATGTGCGTAAGTAAGTACAGTTGGCAATATG
CTAGAGCGTCTTGATAATTTTTTGACACCCTCACGCCGCCGCTCAACACT
ACAACACCAAAAGGTTCATGAAGACGATATCTCGACGGTGATAGAGGGGG
CCTGCGACCCCACAACTAAGGAGGGTCGATGGATCACGGAGTACGACATC
GTGGAGGTGAGGAAGGAATGTCATCATGTTATCATCATTCGCATCCCGCG
CGCTCCGGAGACCTGTCCCCCCTTGCCATTAAGTCATCCGGACCTTGACC
CACACACCCCGGGGTGTTGCGTTGGTCACCAATCACCAAGTAAATCACGA
TCCCGTCGAAACTCTCGTCGTTGCCGTGCTTTGGTATGTTGGCTTGTGAG
GAGGCCCTTTCACTATTATACTGTCGGGTTTTTTTCTACCCGCACAGACG
TGTGTCATAATGATTTGGACGTTTCGATAGATATACATATCGACGTTCCC
ACTTGTCGTGTTTTTCCCAAGTAAGTTGATATTCGGCGTACTTGTATCCC
CTCGTTTGCTCTGGTGTGAGTAGAACTGCCCGCAACCTCGGTTTTGTTAA
AGGGGTGGTACAGGTATCACTTGCAGACTGCCAAAAGCGTACAGTTAGAA
ACGATTATGAGGTATCAACGATCGGTTGGCCATTGCTCGAAGCACTGGGT
ATTGGTCTGTGCGTCATAGCCAAGCTTACTCGTCTGTTTACCTCCCACGT
GCCTTGAGTCGAATCAATATGGCTGCGATGGGTTCGGACACGGACAATGA
CGGCTGTTGTATGCTTGTGCTTTGTGTTCATATTTGTCTCTCTCGGTTTT
GCAGGAGGGGGGATATCTCGAGTTGAAGAAGCAGGACAGCTTTTCCCACT
GCAAGGAAGAGTGCGAGACCATTGCCAAGGTACGAATTGCTTGGGAGAGG
GCTTGAGGGTTTTGTGTTTCGGAATCGGGGGGAGTTTTCTGAAGCTGCTA
TTGCTGTGTCACTTCTCCGTTTGGGCCCCATGGCAAGCATATTGAAGCAG
CAATATGTGAGGAAACGCTGTTACAAAAGCTCCCGCTCCGAAAATATCGA
CCACTCCCCAACGCGTTTGTTTCATATCTACGGGCGTAGCGTAGCGTACC
AAAAGAAGTTTCACGGCGGTCACAGTTAAAGGTTAGAGGTACTAAAGTAG
GACTCGCTGTTATTCTTGATGCCGAAAGCACGTGACCGCCCTTTCATCGC
TTACTGTTTCTGCTGCTCCTGCACACAACTGGTTCTGCGCTGCTGCTGCT
GCTGCTGCCGGCGCCTTACGTGGAACTTGCGGAACCCGAACGTTTCTTCG
ACACTAAGTAGAGCTGCACGGTGCTGGTGGATGACGAGTTGGACGTTGAG
GAGGTGGTGGTGGCACTCTGGAAGAACAAGCTGGGATTGTCGGTGAGCAT
ACCCACAGGCGTTCGGCTCTCACTGCTCGGTAGCTCTCCACAGCGGTGTA
TCATTTGTGGCATTTGCGTGCTCCTGAGCTGCTGCTGTGCCGCCAATACT
CTTTGTCCTCGCTACGCAGCCCCGTGACTACAAGGGTACTGTACTACAAG
GGTACTGTTTGTGTTGACAGAACAGGCACCGGCGTGCAGGAAGGGCTCAA
GACCCCCTCTATGTGATCTATCAGCGTATCTACTATTTTGCTCTGGTTAG
GTCGAGCTGCTGTCCAAAGGGTTTGTCTAGGCTGTCGGTCCGAGCCTGAA
GGGACGTGGCTGCACGCCCCCGAAGTACAAGACCTCGGTAGAAACTCCAA
ACGTGCTCGTTCCGCTGCTTCAACGGATCAAGACTTGCAATGCCAGGCCA
ACCGACGGCCGGCGCTATGCAGTAAAGAATGCAGGTCACGCTACCCGCCA
CACACCCAATCGTGGAAGGTTCTCGGCCGAGCGGCAGTGGCAAGGGTCGC
GTCGCTCTACCCTTGCAAAGTGTTCCGTGATTCTTGTGCGTCTGGCGTAG
GGAGCTGAACCCCTTCACCGCCCCTTATCCCTCCAAATAAATCGCGCCCC
CCTCCCACCCTGTCTCTACCAGTTCTACAATAGTCCAAACCCACGCCGTG
TTTCTCGTGTGTCGAGGGGCACGTTCGATTTTCGAAAAACCTGACCGGAC
GCGCGTGTCCTGTGAACGCGATTTGCGCAGGAGCTTCAAAAGGCAGCTTG
CGGGGAGTGGAGCGATCGGTGCTCGGGGAAGAAGCGCGTGAAGGCTCCGA
AGGACCGCCAGGATTACGAGTTCGAACCGAAGACGGCGAAAGACTTCGAG
GTGGCGGAGGCGATGGAGAGGCTGCAGAACTCAATGGGCGGGATGGGTGA
GGAAAAAGCATTCCTGCGTTGATGTTGACTTGTGTGTCCTTTGGTCGATG
GTTTGTCTTTGTTCTTTGCGGTATGGTACGGGCTTATCCCCGTGGATGCA
TGTATGTACCATCGGTTTTCGAGAGGCCCGGCACTTCGACTTTCATCACG
AACTGAGAGCGGGTCTGGGAATATTATTGGTGAACACCACAAGCGCAGTG
TTTGTATTTTTGTTGTCTCAGGGGCGATCGTACCCGCCGTGACACTGGTG
CTAGTGCGAATTCCCGCTCTACAGCAGGAACATGTAGGATGCACGTCTGT
GTGCAGTGCAACATCCGAGCGCTCGCTTGCTGATCATCGTGGATTCAAAC
TCTTGTAAAGTTTGTCATATCATGCCCCATTTTCTTATGCTTGGTACCGG
GCTGAAATGTATTCACTGCTGCTCGTCTAGGGAAAGATGGGCACGAGGGA
TGGGCAGGTCGTGCAATAGCGGGGCAGGGAATATTCACAGAATTTAATGT
CTAGCTGAGTGTGTCAGCTCCGACACGTGGCGGGTAGCACTGCTGTCGGA
AAAATTGGAATACCATGCCCGTTTTGCACGAGCAGAACGAACGGCGGTGT
TACGTCGCGGGAAGACTACAGGCGTGATACGCGGCAGGCTGACTGGCTGG
CGACTTAGCCATGGCAACAAGAAACGACGAGACCGACCCCCATCCGCGTC
GCCGCCGTCCCCCAAAGGGTGCTAAGGCCACATGAAACTTCAGCCACAGC
ACGGAAGTGACAGTCTTTCCGCCCTTTACCGCTGAAACAGCTGAAACAAA
CCGCGCTATGATCACTCTAACCTTCAGCCACAGAACGGAAACTGATAGCC
TTTCCCCGCCATTTGGAACCGCTGAAGCCCACCGACCAACGCTAAACACT
GTCATCCACTACCGAAACCCCCCACAGGTGGACCGGGAATCTACGGCCCC
GATGATCTCGCTGCGATGGACGCGATGATGTCGCAGATGGGCGACATGGG
TCAAGACCCATTCGCGGACGACTTTGACATGGGCGGAATGGGCGGCATGG
AGTTCTGAAGGAGTTTAGCATGACGTTTTACTATTGTACGCACGAACTGG
TGGAGGAACGAACATATCTGTTTTGTAGACTACGGGCGTTTCGGCCGATG
AAGGGGATTCGCATGGAGTGAGTCCAAAGTAGATTTTGTGTGTACAACCG
GTGGTGCTGGTTCCTGTGGTTGTTGGAGGGGTGTGGCAAGGTTGATTTCG
CGGCCTTGGCCAGGTGTGTGGGAGGGACAAAGGGTGCTCTTCGGGCAATG
GAGGGTTAACATCGGGTTGCGTTTGTGGTGTGGTATGCATGTGGTGATCG
TCTTGTTGGAGGTTGAAGGGAAGGTGTTGTTTTAGTTTTGATGGAGCCTG
CGCGGTTTGTTGCACAATTCGGGGAGGACTATAGGTGTTCTCCTTCCCCT
CGGCAATGTGAGATAATAGTTTTTTTGTGTTTCATGACAGCCGGGTGTGG
CTCTTTTTCATGGTTACGACCGTCTCCGCGCCCTAACCCCATAATTAGAC
TATGTACGCATCCACAAGAAGTGCA
back to top

Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig1094:25650..30974-

>mRNA_E-siliculosus-1a_F_contig1094.651.1 ID=mRNA_E-siliculosus-1a_F_contig1094.651.1|Name=mRNA_E-siliculosus-1a_F_contig1094.651.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=1590bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1094:25650..30974- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
CTGCTCTGCGCTGTGCTGAATCTCTCTTGGCCACTATCCCGTCGCGTGTA
CACTATGAGGGCGCTGGCAGTGTTGACTCTCGCGGCCGCGGCCGTCCCGC
TGAATGCCCAGTTCGGCATGCCGCCGAAGCCAAAGAGCGAACCAGTCAAA
GCTGCTCTGCGCTGTGCTGAATCTCTCTTGGCCACTATCCCGTCGCGTGT
ACACTATGAGGGCGCTGGCAGTGTTGACTCTCGCGGCCGCGGCCGTCCCG
CTGAATGCCCAGTTCGGCATGCCGCCGAAGCCAAAGAGCGAACCAGTCAA
AGGCGACCTGGCCGCAATAAAGTGCGGGGTCTGCCAAGGCCTGGCGGAGC
ACCTTTACGAGAAGGTGGCGGAGATGCGGGAGGCGGCGCCTTTCGGAAAG
GCGACCTGGCCGCAATAAAGTGCGGGGTCTGCCAAGGCCTGGCGGAGCAC
CTTTACGAGAAGGTGGCGGAGATGCGGGAGGCGGCGCCTTTCGGAAAGGT
TCATGAAGACGATATCTCGACGGTGATAGAGGGGGCCTGCGACCCCACAA
CTAAGGAGGGTCGATGGATCACGGAGTACGACATCGTGGAGGTTCATGAA
GACGATATCTCGACGGTGATAGAGGGGGCCTGCGACCCCACAACTAAGGA
GGGTCGATGGATCACGGAGTACGACATCGTGGAGGAGGGGGGATATCTCG
AGTTGAAGAAGCAGGACAGCTTTTCCCACTGCAAGGAAGAGTGCGAGACC
ATTGCCAAGGAGGGGGGATATCTCGAGTTGAAGAAGCAGGACAGCTTTTC
CCACTGCAAGGAAGAGTGCGAGACCATTGCCAAGAGCTGCACGGTGCTGG
TGGATGACGAGTTGGACGTTGAGGAGGTGGTGGTGGCACTCTGGAAGAAC
AAGCTGGGATTGTCGAGCTGCACGGTGCTGGTGGATGACGAGTTGGACGT
TGAGGAGGTGGTGGTGGCACTCTGGAAGAACAAGCTGGGATTGTCGGAGC
TTCAAAAGGCAGCTTGCGGGGAGTGGAGCGATCGGTGCTCGGGGAAGAAG
CGCGTGAAGGCTCCGAAGGACCGCCAGGATTACGAGTTCGAACCGAAGAC
GGCGAAAGACTTCGAGGTGGCGGAGGCGATGGAGAGGCTGCAGAACTCAA
TGGGCGGGATGGGAGCTTCAAAAGGCAGCTTGCGGGGAGTGGAGCGATCG
GTGCTCGGGGAAGAAGCGCGTGAAGGCTCCGAAGGACCGCCAGGATTACG
AGTTCGAACCGAAGACGGCGAAAGACTTCGAGGTGGCGGAGGCGATGGAG
AGGCTGCAGAACTCAATGGGCGGGATGGGTGGACCGGGAATCTACGGCCC
CGATGATCTCGCTGCGATGGACGCGATGATGTCGCAGATGGGCGACATGG
GTCAAGACCCATTCGCGGACGACTTTGACATGGGCGGAATGGGCGGCATG
GAGTTCTGAGTGGACCGGGAATCTACGGCCCCGATGATCTCGCTGCGATG
GACGCGATGATGTCGCAGATGGGCGACATGGGTCAAGACCCATTCGCGGA
CGACTTTGACATGGGCGGAATGGGCGGCATGGAGTTCTGA
back to top