prot_E-siliculosus-1a_F_contig1094.650.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig1094.650.1
Unique Nameprot_E-siliculosus-1a_F_contig1094.650.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length265
Homology
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BLAST of mRNA_E-siliculosus-1a_F_contig1094.650.1 vs. uniprot
Match: A0A6H5L995_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L995_9PHAE)

HSP 1 Score: 449 bits (1155), Expect = 2.410e-158
Identity = 250/261 (95.79%), Postives = 251/261 (96.17%), Query Frame = 0 
Query:    4 TASGCWALAVLLALYISPSGAFLAPTKAALGCFHQHRSPSSPTCLSMMARDELGSGRSSSSRRGFLEGGAVALLASVAAIGLPEPSVAKGIDLSEVXXXXXXXXMHLGAGSSGGKATKPLRDCLLNVERVRISTKQLEDTLTNDGAPPGLTGLVKGLIKNYKLDDSLQQGAKYIESSGDRNAAASAGREALEYLAQTAEYFPVEVDDRTGAPKKLSSEALEFTVNALIATRAKLDLFLSKVPSDALAEARAEIKSEGGDQS 264
            T SGC ALAVLL LY SPSGAFLAPTKAALGCFHQHRS SSPTCLSM ARDEL SG  SSSRRGFLEGGAVALLASVAAIGLPEPSVAKGIDLSEVXXXXXXXXMHLGAGSSGGKATKPLRDCLLNVERVRISTKQLEDTLTNDGAPPGLTGLVKGLIKNYKLD+SLQQGAKYIESSGDRN AASAGREALEYLAQTAEYFPVEVDDRTGAPKKLSSEALEFTVNALIATRAKLDLFLSKVPSDALAEARAEIKSEGGDQS
Sbjct:    2 TGSGCRALAVLLTLYSSPSGAFLAPTKAALGCFHQHRSASSPTCLSMTARDELRSGSISSSRRGFLEGGAVALLASVAAIGLPEPSVAKGIDLSEVXXXXXXXXMHLGAGSSGGKATKPLRDCLLNVERVRISTKQLEDTLTNDGAPPGLTGLVKGLIKNYKLDESLQQGAKYIESSGDRNTAASAGREALEYLAQTAEYFPVEVDDRTGAPKKLSSEALEFTVNALIATRAKLDLFLSKVPSDALAEARAEIKSEGGDQS 262
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BLAST of mRNA_E-siliculosus-1a_F_contig1094.650.1 vs. uniprot
Match: A0A7S2XY69_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XY69_9STRA)

HSP 1 Score: 99.8 bits (247), Expect = 2.990e-21
Identity = 55/146 (37.67%), Postives = 89/146 (60.96%), Query Frame = 0 
Query:  118 KATKPLRDCLLNVERVRISTKQLEDTLTNDGAPPGLTGLVKGLIKNYKLDDSLQQGAKYIESSGDRNAAASAGREALEYLAQTAEYFPVEVDDRTG----APKKLSSEALEFTVNALIATRAKLDLFLSKVPSDALAEARAEIKSE 259
            K TKPL +CL +V  V+++TKQLED +TN      +    + L++NYKL+++L+QG +Y+ES+ +R  A    +EALE L    EYFP   D+ TG    +   L+ E ++F+V AL +T   L+ +LS +P + +A+ +  I  +
Sbjct:  118 KPTKPLEECLESVALVQLTTKQLEDDITNGQEIGDIPAQAQLLLRNYKLEENLRQGVQYLESNAERVEATKYAKEALEDLILITEYFPESYDNFTGKRLPSSLTLTPEKIKFSVKALSSTTKALEGYLSTMPVEMVAKVKQSIAED 263
[Close]
BLAST of mRNA_E-siliculosus-1a_F_contig1094.650.1 vs. uniprot
Match: A0A7S3TS97_9SPIT (Hypothetical protein n=1 Tax=Strombidinopsis acuminata TaxID=141414 RepID=A0A7S3TS97_9SPIT)

HSP 1 Score: 60.5 bits (145), Expect = 3.980e-7
Identity = 41/146 (28.08%), Postives = 72/146 (49.32%), Query Frame = 0 
Query:  118 KATKPLRDCLLNVERVRISTKQLEDTLTN----DGAPPGLTGLVKGLIKNYKLDDSLQQGAKYIESSGDRNAAASAGREALEYLAQTAEYFPVEVDDRTGAPKKLSSEALEFTVNALIATRAKLDLFLSKVPSDALAEARAEIKSE 259
            K+   L++ L  + RV+ +T Q E  ++     D     +   +  ++ NYKL D +   + Y   + +   A+ AG+EA++ L    EYF  E+         L+     F V+A+ ATR KLD FL  +P++ +  AR +++ E
Sbjct:   98 KSVNELQEALYLISRVQEATVQQERLVSTGKFKDMQRNSIKMALNMMLNNYKLGDQIVVASAYASPADNVFKASQAGKEAIDVLETAQEYFAKELK-----VSGLTDTQRSFIVDAMTATRTKLDNFLKFMPAETVQAARKQVEDE 238
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1094.650.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5L995_9PHAE2.410e-15895.79Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A7S2XY69_9STRA2.990e-2137.67Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S3TS97_9SPIT3.980e-728.08Hypothetical protein n=1 Tax=Strombidinopsis acumi... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 20..26
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 27..264
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..7
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 8..19
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..26
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..24
score: 0.831
NoneNo IPR availableTMHMMTMhelixcoord: 7..29

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig1094contigE-siliculosus-1a_F_contig1094:22548..24961 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig1094.650.1mRNA_E-siliculosus-1a_F_contig1094.650.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig1094 22180..25163 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig1094.650.1 ID=prot_E-siliculosus-1a_F_contig1094.650.1|Name=mRNA_E-siliculosus-1a_F_contig1094.650.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=265bp
MYATASGCWALAVLLALYISPSGAFLAPTKAALGCFHQHRSPSSPTCLSM
MARDELGSGRSSSSRRGFLEGGAVALLASVAAIGLPEPSVAKGIDLSEVK
GLDVSEVMHLGAGSSGGKATKPLRDCLLNVERVRISTKQLEDTLTNDGAP
PGLTGLVKGLIKNYKLDDSLQQGAKYIESSGDRNAAASAGREALEYLAQT
AEYFPVEVDDRTGAPKKLSSEALEFTVNALIATRAKLDLFLSKVPSDALA
EARAEIKSEGGDQS*
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