prot_E-siliculosus-1a_F_contig1094.652.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig1094.652.1
Unique Nameprot_E-siliculosus-1a_F_contig1094.652.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length190
Homology
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BLAST of mRNA_E-siliculosus-1a_F_contig1094.652.1 vs. uniprot
Match: A0A6H5LQ87_9PHAE (LETM1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LQ87_9PHAE)

HSP 1 Score: 179 bits (453), Expect = 6.790e-49
Identity = 135/168 (80.36%), Postives = 138/168 (82.14%), Query Frame = 0 
Query:   23 MDRRRARTALCTYFLAVGSSRAYTFAPSILHGTPPGGTGARAREPPGMRNPLSGSRAVRRVRGSIRGRNNGLNGTGXXXXXXXXXXXXXNTXXTNSITPDAGGPDXXXXXXXXXXXXXSGSGPAVAGQRTPEVGAAXXXXXXXXXXXXXXXXXXRSRPAMALGQAMQG 190
            MD+RRARTALCTYFLAVGSSRAY FAPS+LHGT PGG GARA EPPGM + LSGSRAVRRVRG IRGRNNGLNGTGXXXXXXXXXXXXX  XXTNSITPDAGGPD XXXXXXXXXXXXSG GPAVAGQR PEVGAA                  RSRPAMALGQAMQG
Sbjct:    1 MDKRRARTALCTYFLAVGSSRAYAFAPSVLHGTSPGGPGARAHEPPGMGSSLSGSRAVRRVRGYIRGRNNGLNGTGXXXXXXXXXXXXX-XXXTNSITPDAGGPDGXXXXXXXXXXXXSG-GPAVAGQRAPEVGAAGAAGVGIGGGARRPYLAGRSRPAMALGQAMQG 166
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1094.652.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5LQ87_9PHAE6.790e-4980.36LETM1 domain-containing protein n=1 Tax=Ectocarpus... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig1094contigE-siliculosus-1a_F_contig1094:31112..32659 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig1094.652.1mRNA_E-siliculosus-1a_F_contig1094.652.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig1094 31112..32660 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig1094.652.1 ID=prot_E-siliculosus-1a_F_contig1094.652.1|Name=mRNA_E-siliculosus-1a_F_contig1094.652.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=190bp
HQTQQDTQRRAQRRQERNSRLAMDRRRARTALCTYFLAVGSSRAYTFAPS
ILHGTPPGGTGARAREPPGMRNPLSGSRAVRRVRGSIRGRNNGLNGTGGG
GGGSSGVGGSTNTGNTNSITPDAGGPDGGGNTAASAAAGGSGSGPAVAGQ
RTPEVGAAGAAGVGIGGGARRPYLAGRSRPAMALGQAMQG
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