mRNA_E-siliculosus-1a_F_contig1092.640.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-siliculosus-1a_F_contig1092.640.1
Unique NamemRNA_E-siliculosus-1a_F_contig1092.640.1
TypemRNA
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Homology
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BLAST of mRNA_E-siliculosus-1a_F_contig1092.640.1 vs. uniprot
Match: D7G3Q7_ECTSI (2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3Q7_ECTSI)

HSP 1 Score: 347 bits (891), Expect = 9.140e-118
Identity = 193/198 (97.47%), Postives = 193/198 (97.47%), Query Frame = 1 
Query:    1 MVASLTSIAALLALVWPASAFVKPNVGSSLQARTRGVRDAAPASAPRLSMAAGPTVENVAAVVLAGGVGKRMEAGMPKQFLELQGETVLEHSLKLFLRLKGVSQLILVLDEQYRPMLQDLQKREGRLVFADPGLERQHSVYNALQKVEDGSSLVCIHDAARPLVTKAAVKKASCYFVIADADEYGAAVLGVPMKATVK 594
            MVASLTSIAALLALVWPASAFVKPNVGSSLQARTRGVRDAAPASAPRLSMAAGPTVENVAAVVLAGGVGKRMEAGMPKQFLELQGETVLEHSLKLFLRLKGVSQLILVLDEQYRPMLQDLQKREGRLVFADPGLERQHSVYNALQKVEDGSSLVCIHDAARPLVTKAAVKK     VIADADEYGAAVLGVPMKATVK
Sbjct:    1 MVASLTSIAALLALVWPASAFVKPNVGSSLQARTRGVRDAAPASAPRLSMAAGPTVENVAAVVLAGGVGKRMEAGMPKQFLELQGETVLEHSLKLFLRLKGVSQLILVLDEQYRPMLQDLQKREGRLVFADPGLERQHSVYNALQKVEDGSSLVCIHDAARPLVTKAAVKK-----VIADADEYGAAVLGVPMKATVK 193
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BLAST of mRNA_E-siliculosus-1a_F_contig1092.640.1 vs. uniprot
Match: A0A835YTP8_9STRA (2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YTP8_9STRA)

HSP 1 Score: 179 bits (453), Expect = 1.140e-52
Identity = 92/143 (64.34%), Postives = 119/143 (83.22%), Query Frame = 1 
Query:  166 VENVAAVVLAGGVGKRMEAGMPKQFLELQGETVLEHSLKLFLRLKGVSQLILVLDEQYRPMLQDLQKREGRLVFADPGLERQHSVYNALQKVEDGSSLVCIHDAARPLVTKAAVKKASCYFVIADADEYGAAVLGVPMKATVK 594
            V++VAA++LAGGVG RM+A MPKQFLEL+G+ VL+HSL+LF  L G+S++ILV+D+QYR   + +Q+ E RLVFADPG+ERQ+SV+N LQ V +G+S+VCIHDAARPLVTK  +     Y V+ DA+E+GAAVLGVPMKATVK
Sbjct:   48 VQDVAAIILAGGVGSRMKANMPKQFLELRGKPVLQHSLELFRSLDGISRIILVIDQQYRDQFKTMQEEEPRLVFADPGIERQNSVFNGLQAVHEGASVVCIHDAARPLVTKECI-----YQVLRDAEEHGAAVLGVPMKATVK 185
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BLAST of mRNA_E-siliculosus-1a_F_contig1092.640.1 vs. uniprot
Match: A0A7S2V2L3_9STRA (2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V2L3_9STRA)

HSP 1 Score: 163 bits (412), Expect = 2.940e-46
Identity = 91/143 (63.64%), Postives = 107/143 (74.83%), Query Frame = 1 
Query:  166 VENVAAVVLAGGVGKRMEAGMPKQFLELQGETVLEHSLKLFLRLKGVSQLILVLDEQYRPMLQDLQKREGRLVFADPGLERQHSVYNALQKVEDGSSLVCIHDAARPLVTKAAVKKASCYFVIADADEYGAAVLGVPMKATVK 594
            VE V+ V+LAGGVG RM+A  PKQFLEL G  VL+H++ LF  L+GV Q+ILVLDEQYRP  Q +   E RL FADPG ERQ SV N L  V +G+SLVC+HDAARPLVT   + +     VIADA+E+GAAVLGVPMKATVK
Sbjct:   64 VEKVSVVLLAGGVGSRMKADRPKQFLELLGRPVLDHTIDLFRSLRGVDQIILVLDEQYRPNYQSVSDEEPRLKFADPGKERQDSVCNGLSLVGEGASLVCVHDAARPLVTPENIHQ-----VIADAEEHGAAVLGVPMKATVK 201
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BLAST of mRNA_E-siliculosus-1a_F_contig1092.640.1 vs. uniprot
Match: A0A6H5L038_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L038_9PHAE)

HSP 1 Score: 156 bits (394), Expect = 2.980e-46
Identity = 83/85 (97.65%), Postives = 84/85 (98.82%), Query Frame = 1 
Query:  148 MAAGPTVENVAAVVLAGGVGKRMEAGMPKQFLELQGETVLEHSLKLFLRLKGVSQLILVLDEQYRPMLQDLQKREGRLVFADPGL 402
            MAAGPTVENVAAVVLAGGVGKRMEA MPKQFLELQGETVLEHSLKLFLRLKGVSQLILVLDEQYRPML+DLQKREGRLVFADPGL
Sbjct:    1 MAAGPTVENVAAVVLAGGVGKRMEADMPKQFLELQGETVLEHSLKLFLRLKGVSQLILVLDEQYRPMLRDLQKREGRLVFADPGL 85
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BLAST of mRNA_E-siliculosus-1a_F_contig1092.640.1 vs. uniprot
Match: A0A7S1UCG6_9STRA (Hypothetical protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UCG6_9STRA)

HSP 1 Score: 155 bits (392), Expect = 1.820e-43
Identity = 94/174 (54.02%), Postives = 116/174 (66.67%), Query Frame = 1 
Query:   73 NVGSSLQARTRGVRDAAPASAPRLSMAAGPTVENVAAVVLAGGVGKRMEAGMPKQFLELQGETVLEHSLKLFLRLKGVSQLILVLDEQYRPMLQDLQKREGRLVFADPGLERQHSVYNALQKVEDGSSLVCIHDAARPLVTKAAVKKASCYFVIADADEYGAAVLGVPMKATVK 594
             +GS  +A    +   APA AP+          +VA V+LAGGVG RM+A  PKQFL L G+ VLEH+++LF  ++GVSQ++LVLDEQYR   +     + R VFADPG ERQ SV N L KV DG+SLV +HDAARPLVT A +     Y V+ D  E+GAAVLGVPMKATVK
Sbjct:   26 RLGSGRRASALRMSAKAPAGAPK----------DVAVVLLAGGVGSRMKADRPKQFLTLAGKPVLEHTIELFRGIEGVSQIVLVLDEQYRGEWKKFAAADERFVFADPGKERQDSVENGLSKVVDGASLVAVHDAARPLVTPAEI-----YNVLMDGVEHGAAVLGVPMKATVK 184
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BLAST of mRNA_E-siliculosus-1a_F_contig1092.640.1 vs. uniprot
Match: A0A7S2DHR1_9STRA (2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DHR1_9STRA)

HSP 1 Score: 155 bits (391), Expect = 3.610e-43
Identity = 82/143 (57.34%), Postives = 106/143 (74.13%), Query Frame = 1 
Query:  166 VENVAAVVLAGGVGKRMEAGMPKQFLELQGETVLEHSLKLFLRLKGVSQLILVLDEQYRPMLQDLQKREGRLVFADPGLERQHSVYNALQKVEDGSSLVCIHDAARPLVTKAAVKKASCYFVIADADEYGAAVLGVPMKATVK 594
            VENVA ++LAGGVG RM+A  PKQFLEL G+ VL H+L+LFL L G+++++LV+D +Y    + LQ    +L+FA PG ERQ SV+N LQK+ D + +VCIHDAARPL+T  A+     Y V+ D  E+GAAVLGVPMKATVK
Sbjct:   66 VENVAVILLAGGVGSRMKANQPKQFLELLGKPVLMHTLELFLSLDGIARVVLVIDAKYESQFEPLQALNPKLIFAPPGKERQDSVFNGLQKINDDAPVVCIHDAARPLITPEAI-----YKVLRDGIEHGAAVLGVPMKATVK 203
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BLAST of mRNA_E-siliculosus-1a_F_contig1092.640.1 vs. uniprot
Match: A0A7S0Y4H2_HEMAN (Hypothetical protein (Fragment) n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S0Y4H2_HEMAN)

HSP 1 Score: 150 bits (378), Expect = 7.380e-42
Identity = 84/151 (55.63%), Postives = 106/151 (70.20%), Query Frame = 1 
Query:  142 LSMAAGPTVENVAAVVLAGGVGKRMEAGMPKQFLELQGETVLEHSLKLFLRLKGVSQLILVLDEQYRPMLQDLQKREGRLVFADPGLERQHSVYNALQKVEDGSSLVCIHDAARPLVTKAAVKKASCYFVIADADEYGAAVLGVPMKATVK 594
            L  AA   V+ V  ++LAGGVG RM+AG PKQFLEL+G+ +L HSL LF  L+GV  + +V+ E+YR M  D+ K++ R+ FA PG ERQ SV+N LQ+V D ++LV +HDAARPLVT   V     Y V  DA E+GAAVL VPMKATVK
Sbjct:   72 LRAAASSGVDGVGVILLAGGVGSRMKAGKPKQFLELEGKPMLMHSLDLFRGLEGVDSITIVIAEEYRDMFDDIVKKDDRIRFAGPGKERQDSVFNGLQQVPDSATLVAVHDAARPLVTPEEV-----YNVFRDAKEHGAAVLAVPMKATVK 217
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BLAST of mRNA_E-siliculosus-1a_F_contig1092.640.1 vs. uniprot
Match: A0A0G4G666_VITBC (2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4G666_VITBC)

HSP 1 Score: 150 bits (379), Expect = 2.550e-41
Identity = 88/157 (56.05%), Postives = 110/157 (70.06%), Query Frame = 1 
Query:  124 PASAPRLSMAAGPTVENVAAVVLAGGVGKRMEAGMPKQFLELQGETVLEHSLKLFLRLKGVSQLILVLDEQYRPMLQDLQKREGRLVFADPGLERQHSVYNALQKVEDGSSLVCIHDAARPLVTKAAVKKASCYFVIADADEYGAAVLGVPMKATVK 594
            P  A  LS +    V+NV  ++LAGGVGKRM A  PKQFLEL G+ VLEHS++LFL L GV  ++LVLDE YR   +    R+ R+VFA PG ERQ SV+N LQ + +G S+VCIHD+ARPLVT+  V +      I DA+ +GAAV+GVPMKATVK
Sbjct:   48 PLLAASLSPSVDGHVDNVGVILLAGGVGKRMNADRPKQFLELMGKPVLEHSVELFLTLPGVKHIVLVLDEAYRDTFRG---RDERIVFAPPGEERQDSVWNGLQAMPEGVSVVCIHDSARPLVTQGTVLQC-----IRDANTHGAAVVGVPMKATVK 196
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BLAST of mRNA_E-siliculosus-1a_F_contig1092.640.1 vs. uniprot
Match: A0A7S0VEW7_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Hemiselmis tepida TaxID=464990 RepID=A0A7S0VEW7_9CRYP)

HSP 1 Score: 147 bits (372), Expect = 1.430e-40
Identity = 83/151 (54.97%), Postives = 104/151 (68.87%), Query Frame = 1 
Query:  142 LSMAAGPTVENVAAVVLAGGVGKRMEAGMPKQFLELQGETVLEHSLKLFLRLKGVSQLILVLDEQYRPMLQDLQKREGRLVFADPGLERQHSVYNALQKVEDGSSLVCIHDAARPLVTKAAVKKASCYFVIADADEYGAAVLGVPMKATVK 594
            L  AA   V+ V  ++LAGGVG RM+AG PKQFLELQG+ +L HSL LF  L+G+  + +V+ E+YR M  D+ K + R+ FA PG ERQ SV+N LQ+V + + LV +HDAARPLVT   V     Y V  DA E+GAAVL VPMKATVK
Sbjct:   49 LRSAASSGVDGVGVILLAGGVGSRMKAGKPKQFLELQGKPMLMHSLDLFRGLEGIESITIVIAEEYRDMFDDIVKADDRIRFAGPGKERQDSVFNGLQQVPESAKLVAVHDAARPLVTPEEV-----YNVFRDAKEHGAAVLAVPMKATVK 194
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BLAST of mRNA_E-siliculosus-1a_F_contig1092.640.1 vs. uniprot
Match: A0A7S4UD44_GUITH (2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase n=2 Tax=Guillardia theta TaxID=55529 RepID=A0A7S4UD44_GUITH)

HSP 1 Score: 147 bits (370), Expect = 9.760e-40
Identity = 76/143 (53.15%), Postives = 111/143 (77.62%), Query Frame = 1 
Query:  166 VENVAAVVLAGGVGKRMEAGMPKQFLELQGETVLEHSLKLFLRLKGVSQLILVLDEQYRPMLQDLQKREGRLVFADPGLERQHSVYNALQKVEDGSSLVCIHDAARPLVTKAAVKKASCYFVIADADEYGAAVLGVPMKATVK 594
            +++V+ ++LAGGVG RM+A  PKQFLEL+G+ +L HSL+LF++++GV+++++V+  +YR  L D+ K++ R+ FA+PG ERQ SV+N LQ+    +SL+CIHDAARPLVT+  +   SC   + DA E+GAAVL VPMKATVK
Sbjct:   89 IDDVSVILLAGGVGSRMKADRPKQFLELEGKPILRHSLELFMKIQGVTRIVIVIAPEYRDSLADVTKKDARICFAEPGKERQDSVFNGLQETALDTSLICIHDAARPLVTEQEIL--SC---MNDALEHGAAVLAVPMKATVK 226
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1092.640.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G3Q7_ECTSI9.140e-11897.472-C-methyl-D-erythritol 4-phosphate cytidylyltrans... [more]
A0A835YTP8_9STRA1.140e-5264.342-C-methyl-D-erythritol 4-phosphate cytidylyltrans... [more]
A0A7S2V2L3_9STRA2.940e-4663.642-C-methyl-D-erythritol 4-phosphate cytidylyltrans... [more]
A0A6H5L038_9PHAE2.980e-4697.65Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S1UCG6_9STRA1.820e-4354.02Hypothetical protein n=2 Tax=Phaeomonas parva TaxI... [more]
A0A7S2DHR1_9STRA3.610e-4357.342-C-methyl-D-erythritol 4-phosphate cytidylyltrans... [more]
A0A7S0Y4H2_HEMAN7.380e-4255.63Hypothetical protein (Fragment) n=1 Tax=Hemiselmis... [more]
A0A0G4G666_VITBC2.550e-4156.052-C-methyl-D-erythritol 4-phosphate cytidylyltrans... [more]
A0A7S0VEW7_9CRYP1.430e-4054.97Hypothetical protein (Fragment) n=1 Tax=Hemiselmis... [more]
A0A7S4UD44_GUITH9.760e-4053.152-C-methyl-D-erythritol 4-phosphate cytidylyltrans... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig1092contigE-siliculosus-1a_F_contig1092:32415..37780 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-19
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Properties
Property NameValue
Start1
Stop0
Cds size594
Model size594
Exons7
Ec32 orthologEc-12_008050.1
Ec32 ortholog description4-diphosphocytidyl-2C-methyl-D-erythritol synthase, chloroplast precursor
Hectar predicted targeting categorychloroplast
BRITEko00000,ko00001,ko00002,ko01000
Best eggNOG OGNA|NA|NA
Best tax levelEukaryota
COG Functional cat.I
EC2.7.7.60
EggNOG OGs2QUUE@2759,COG1211@1
EggNOG free text desc.D-ribitol-5-phosphate cytidylyltransferase activity
GOsGO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006081,GO:0006082,GO:0006090,GO:0006629,GO:0006644,GO:0006720,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008299,GO:0008610,GO:0008654,GO:0009058,GO:0009240,GO:0009507,GO:0009532,GO:0009536,GO:0009570,GO:0009987,GO:0016740,GO:0016772,GO:0016779,GO:0019288,GO:0019637,GO:0019682,GO:0019752,GO:0032787,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044422,GO:0044424,GO:0044434,GO:0044435,GO:0044444,GO:0044446,GO:0044464,GO:0046490,GO:0050518,GO:0070567,GO:0071704,GO:0090407,GO:1901135,GO:1901576
KEGG ModuleM00096
KEGG Pathwayko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130
KEGG ReactionR05633
KEGG koko:K00991
KEGG rclassRC00002
Preferred nameCMS
Seed eggNOG ortholog2880.D7G3Q7
Seed ortholog evalue3.9e-94
Seed ortholog score350.9
Taxonomic scopeEukaryota
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927594.4635112-CDS-E-siliculosus-1a_F_contig1092:32414..325071622927594.4635112-CDS-E-siliculosus-1a_F_contig1092:32414..32507Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1092 32415..32507 +
1696318602.9248447-CDS-E-siliculosus-1a_F_contig1092:32414..325071696318602.9248447-CDS-E-siliculosus-1a_F_contig1092:32414..32507Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1092 32415..32507 +
1622927594.47925-CDS-E-siliculosus-1a_F_contig1092:33691..337631622927594.47925-CDS-E-siliculosus-1a_F_contig1092:33691..33763Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1092 33692..33763 +
1696318602.9367263-CDS-E-siliculosus-1a_F_contig1092:33691..337631696318602.9367263-CDS-E-siliculosus-1a_F_contig1092:33691..33763Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1092 33692..33763 +
1622927594.492397-CDS-E-siliculosus-1a_F_contig1092:34047..341091622927594.492397-CDS-E-siliculosus-1a_F_contig1092:34047..34109Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1092 34048..34109 +
1696318602.9461737-CDS-E-siliculosus-1a_F_contig1092:34047..341091696318602.9461737-CDS-E-siliculosus-1a_F_contig1092:34047..34109Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1092 34048..34109 +
1622927594.509278-CDS-E-siliculosus-1a_F_contig1092:34876..349601622927594.509278-CDS-E-siliculosus-1a_F_contig1092:34876..34960Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1092 34877..34960 +
1696318602.956452-CDS-E-siliculosus-1a_F_contig1092:34876..349601696318602.956452-CDS-E-siliculosus-1a_F_contig1092:34876..34960Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1092 34877..34960 +
1622927594.525192-CDS-E-siliculosus-1a_F_contig1092:35713..358031622927594.525192-CDS-E-siliculosus-1a_F_contig1092:35713..35803Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1092 35714..35803 +
1696318602.9660256-CDS-E-siliculosus-1a_F_contig1092:35713..358031696318602.9660256-CDS-E-siliculosus-1a_F_contig1092:35713..35803Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1092 35714..35803 +
1622927594.5427258-CDS-E-siliculosus-1a_F_contig1092:37353..374801622927594.5427258-CDS-E-siliculosus-1a_F_contig1092:37353..37480Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1092 37354..37480 +
1696318602.9762864-CDS-E-siliculosus-1a_F_contig1092:37353..374801696318602.9762864-CDS-E-siliculosus-1a_F_contig1092:37353..37480Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1092 37354..37480 +
1622927594.5573113-CDS-E-siliculosus-1a_F_contig1092:37714..377801622927594.5573113-CDS-E-siliculosus-1a_F_contig1092:37714..37780Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1092 37715..37780 +
1696318602.9859505-CDS-E-siliculosus-1a_F_contig1092:37714..377801696318602.9859505-CDS-E-siliculosus-1a_F_contig1092:37714..37780Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1092 37715..37780 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig1092.640.1prot_E-siliculosus-1a_F_contig1092.640.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalepolypeptideE-siliculosus-1a_F_contig1092 32415..37780 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-siliculosus-1a_F_contig1092.640.1

>prot_E-siliculosus-1a_F_contig1092.640.1 ID=prot_E-siliculosus-1a_F_contig1092.640.1|Name=mRNA_E-siliculosus-1a_F_contig1092.640.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=198bp
MVASLTSIAALLALVWPASAFVKPNVGSSLQARTRGVRDAAPASAPRLSM
AAGPTVENVAAVVLAGGVGKRMEAGMPKQFLELQGETVLEHSLKLFLRLK
GVSQLILVLDEQYRPMLQDLQKREGRLVFADPGLERQHSVYNALQKVEDG
SSLVCIHDAARPLVTKAAVKKASCYFVIADADEYGAAVLGVPMKATVK
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mRNA from alignment at E-siliculosus-1a_F_contig1092:32415..37780+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-siliculosus-1a_F_contig1092.640.1 ID=mRNA_E-siliculosus-1a_F_contig1092.640.1|Name=mRNA_E-siliculosus-1a_F_contig1092.640.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=5366bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1092:32415..37780+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
ATGGTAGCATCGCTGACATCGATCGCGGCCTTGCTTGCCCTTGTCTGGCC
CGCCTCGGCGTTTGTGAAGCCAAATGTTGGCAGCTCCCTCCAGGTCTGGC
GTAATCGTAGCCTGTCGGCCTTGTGTATCATGTTGCACGTCGCCTTTTTT
TAGGTTCAGCTCTCCCTCTCGCACGTACATGTGCGCCGCATACGCTAGCT
GTGTGGTAAGATAGTAGCGACTACTGGGGGGGGTGAAGCAGCACTTGCAG
TGGTTGCTTCGTCGGAACCAGGGATGTTTTGTATCTCGCTCTCTCTGTGT
CTGTCTGTTTGTTGTGCTATCTTTCTGGCGAGGGGATCGTCATGCGCTCA
ACAAAACGTAAACGTTATCGCTCCATCAGCTGTCACATCCCTTTTGTCTT
GCGCCCTCCCCCCATGGTAGCGATGCCCCCTTCCTTCGGGCCGGTGAAAG
GCCCAGCGAGGGGGAGGCAGGGCAGGGCGGTGCAGGCCACTGGTTTGCCC
CCCAATATCGATATTTACTAGTCCCCACGTTCCTCTTCGCGTGGGCAAAA
TGTCGGAAAATTTCAAATCCCGAGGCCTGCTGCTGCTATGCTATCTATGC
TGTGCAAGACACCGGGTACGGCTGTCCATCGCCACCAAGCGCCAAGAACA
TGTACCAGCCTACACACACAATCAAGTCCGCCTCCTCCGCTCCGGCAGCA
AATCTGCTTGTGAATCTCGAGATACAGCAGTTGGGTTACCCCTTTCCGCG
GCATGTGTTTGCCCCACGTGGTCGTTGCATTGCTACGATCCCATTTGCAA
CTTTGTCCCATGGTATTGTAACCGCGGTGGGTATCAGCTGGTTCCTCCTC
CGGAGCTCTCCGGGAGGGAGCGTGACCACCGCGCATCGAAGAGGGTGTTC
AGCGGGCATTCATCGCCTTAACCTAGCCGGCTGTTCCACACGCGCGCAAG
ACACAGCAGTGCTCGGCTGGTTGTTGCCAATCACGACGCAATTTGTCTTC
GCCGTGTCGGAAGGACAACAGCAGTGCCAATCACGATCTACCGCCGTCGA
TACGATTCGCCAACTCGCCGCCACGCCTTCGGCACTGCTGTTGTATCTGG
ACTGCGAGCGTGTCGGCACATGCTCAATGTCGTCATGATCTTCCTTGGTC
CGTTGGATAGCACCCGTAGTCACCCCCACCAAAGCCGGCTACTCAGCACC
GCCTGTCAGGTTGTGCGTCGACCCTTACCGACCGACCACTTTCTTCCGTT
CGATGCTGTTTCTCCCTCCGGTTGCAGGCGAGGACCAGAGGTGTGAGGGA
CGCCGCTCCTGCATCGGCGCCTCGACTGTCGATGGCTGCTGGGCCCACGG
TGAGTCAGCAAGAGAAACCAGCCGTTTTGAAGGCCTCCGTCGAGCACCAC
TTACCCAGAAGACCGGTGGGATTGATTGGCGCAGGGCCTTGGCTCTCTTT
TCTGTTTGCGACTGTTGTGGCGTGCCTGAAACGTCCAAGCTGGATTCGAC
TACTACCCTGAAGAGCAGCATCGTTTTCGGTACGCTGCCATGCCACCATG
CCGTGCTCGGCCCACACCGGGACATCGCCCAAGAAACCATCGGCTCCGAA
TCACCTGCCTCACTACTCCCCCCCCGCGCGCAGGTGGAAAACGTGGCAGC
TGTTGTCCTTGCCGGAGGCGTCGGCAAGCGGATGGAGGCAGGCATGTAAG
TACGCGGAAGCCAGGAGTTTGGGATGACTGAGTGGGGTTATTAATGGCCG
GGGGGCACAAGTAGGCGGCACGCACAACCGTCACAAAGGTGGATGCCGTA
TGTTGGTAGCGACAAGACTCCCCTTGACTTCGCACAGGCCAGGTGTACAC
ATTGTTTGGCTTGCATCGGCTGCAGGCGAATTCGTCTCAACGCCTGACAG
CGGAGGGGTTGCGTTGTGTCACAAGCTGTTTTATTATCGTCGTGGCTTGG
TAATATTTTCACTGTGGGCTGAAGGGAGACAGGCGGATTTTCCTCTTGTA
GCCGACGATGTGTCTGAACGCACAGAAAGCAGTCCCTCGATCGATTGTTT
AAGATGCACTCCCTCGATCGATTTTTTAACGTGCACGATTGCTCCTCAAC
CATCAAGAGGCTGCCATCGCCGAAACGGGTGGAACATCTCGTGGAGAGAG
AGCTTCCTTGGTGGCCATGGGCAGCAACCCCTTGTTGTGGTGCAATCCAT
CTTGTGGCAATCGATCTCATGCATGCCCGTGCGTTCGCCGGCACTTCTTG
CGGGTTGTAGCCACATCCACCCTTGCGTTGAGCACCCATGTCGTTTTCGA
TCATGGGTGTTTGGGCACCATGTGATGATGCTTGACGCTGCAACCGTACC
GCCGTTCTGGCATCCTACCTCCACGTCAGGAAAGTTTAGTCCCGGCCGTG
TCACTTCGTCCGTTCCCCCCCCACCCAACCCGATTGTGATTGCCGTTTTT
CGTTGAAAAAAGGCCGAAGCAATTCCTGGAGCTGCAAGGGGAGACCGTTT
TGGAGCACAGCCTCAAGCTCTTCCTCAGGCTTAAGGGAGTGTCACAGTGA
GTTCCTCTGATTTTTTGTCGCTGGCAAAGACGGTTTCAACACGCATCTTG
CAACTCCAAGCGCTCGCATAGATGGAGTGTGTGCTTGCGGAGGTGCTCAA
GGAGAGGTTCACGGACCCGCCGTCGCCGTCCGCCCCACGATCCTTGTAGA
TTCTTGTTTTTCAAGGCAACGAGTATGCCTTCTTGCTGTTCAGAGATTGT
TGTTTGCTGCGTTTCTCGACCCGTGTCATACGGGAGCGTTCCGGACCTAG
TAGGTGCGGGACCACTTCAGTGTATCCTAAACTATGGTCGTCTATCCCCA
GCACCGTGGATGCCGTTTTGTTCTTGGAAGGAGCAAAAAAGTGTTCTACT
TGAACTTTGTCCAGTAGAACCCCTCCTTTCGTTCTTTGCCAAGGCGGAGA
CGCGGCATGTCCGTGGTCACGAGCTATACATGTAGAACCGAAAATCACGT
ACAGAAGGGAATTGTGATGAAAACGTTAATGGTGGGGGGTTTGGTGATCC
CAAGAATAAAGTACAAAACTCTGTATGATTGCTGTATGATTGTGAAATGT
TGAAGGTGAGGGTTCCGATGACTCCAAACGAGGCACAAACAACCCGATAG
GTGGAAACGTAGCGGAGTGTGCACATCGATTCAAAGTGAGGTACAGACCA
CAAGATCGTAAACGGCGTGTTTGATGACAGTTACGGCGGGCGACCTTCGC
GGTGAAGAATATCCCCCCGCCCCCGTTTCTGCGGCTGTGTGATCGGCAGG
CTTATCCTCGTCCTGGACGAGCAGTACCGCCCGATGCTGCAGGATCTTCA
GAAGCGAGAAGGGAGGCTGGTCTTCGCAGACCCGGGATTGTGAGAGACGG
TGCTGTTGCGACAGATACTTATATACCCATGCCTTTGTCAGCCTTCGCAA
TGCCTCCCCCTTCCTGTTGACTTTGCGATACGGAGGAAGAAATGTCCGCT
AGTCGGAGAATAATGGCCTGCGTGTGTTTCGGCGAGCCCTGCAGTGTAGG
TTAAAACACGGCGGTTCATTCATATCTATCGTGTGCCCGATGTTGGAAAT
TGCTTATTGACTTGAAACTCTATACAACAATTAAATCCGGCTCTGTGTGT
AGGTCCCCGGTTTGTGTAGGTACGTATCTACTTGCGTCTTTTTCTGTATT
CACAAGTCGCCTCATCTGCGTACCCCCACCGCCCAAGCCGTCGTCTGTGT
AGGTTTTGCTGTACTCAGGTTTGCGTCGCTGTGTACCCCTACCGCTCAGG
TCTCAACACATTGGAAAAGAATGCTCGAAATTTCTTCTCACTTGACTTTG
TAGTTTGATTGAGTTTGACTCTAAGTTCCCTTGCGTGCAGGCAGAGCGAC
GGACAAACAAACTACTTCTAATTTATTTGATGAAAACAGACGTGTATGTG
CCACAGCCCGAGCCCACTACAGTGGTGGGCGTTCGACAGACCAGAAAATG
AATAAGGCGGGCGGGTATCGGCCGGTCTTTCGGTTTTTGTGGCTCATCAT
ATAGAACGGTTAGAATACCGCATGGAAGGGAGGGTCATCTGGCGTAGTGT
TTGCGCGACTTGCTCTGCGGCTACCGAAATGGGTTCGAATAACGCCTAGG
CCGTGTTTTTCTGCCTAGAGAAAATGTATGCGGCGGGAGCCCCATCACCC
GTGGAATTAACTCCATATATATTGCGTCCCCAAAACTCAAAACTAAAGTA
CACGTACCCAAAACAAAACTTGGACGTGAGAGGAGGGCGGTTGGCGGAGC
GGCTGCTGCGACGGCACTGGTCTGCCTGGGTGGTGTGAAGCCTGGTGGTC
GGAGTTCAGGGTCTCCTGCGAGGCGGTACATTGCTCTGTCTGGAGCGGTC
CCACCATCACGACGGCATGGCCGACGGATTCGCCGTCGACGGTGTCAGCC
ACCGACGGCAGACAGAGCAATGTACCGCCTCGCAGGAGACCCTGAACTCC
GACCACCAGGCTTCACCACCCAGGCAGACCAGTGCCGTCGCAGCAGCCGC
TCCGCCAGTCGCCCTCCTCTCGCGTCGTAGCGTCCGCCACTGTAGACGAG
CAAGCAGGTATATCCGGACGTGCTTGGCTTCTGTTTTAGGGGGGTTAGAA
CATGACGTGCTTTCTCTCTCCCCTTCGGCAGACACGCGTCTGTTGGCGCT
CGTGTGTCGCGCCATGAAACCGCAAGACGAGTCGTCGTGTTTGTCCGTAC
CATCTCGGGCTTCTATGGCGTGGCGATTTCGCACAGCTTTCCACTGAAGA
TATGCCTTCTCGAGTGACTGGATCGATGACGGTAACGCTCATCCACCGCT
CCTCTCGGATTTTTAGTTGCCTCTTTCTCTCGCCCCCTCCACTCCTTGTC
CCTCCCCCCCCCCCAATCTCTCTCCCTCTCTCATCGTAGGGAACGGCAGC
ACTCTGTGTACAACGCTCTCCAGAAAGTCGAGGACGGTTCTTCCCTCGTG
TGCATCCACGATGCGGCGCGACCTTTGGTAACCAAGGCTGCGGTAAAAAA
GGCAAGCTGTTACTTTGTTGATGGGATACAGTCACCGGCAACTATACTGC
TCCTGCTGTTGTTGTTATGGATGCACTGGTCGACTGTTTTCTGACACGCT
TTTTGTTCATGCCGTCGCGTATTTGCTGTCGGTTGCGTTTACGCCATTCG
TTGCCCTTGACGCTTTCTGTACGTCGCAGGTATATCGCCGTTTCACTGCT
GTAGACTAGTATAAAATGGCCCTCTTTTTTTCTTTTTCTATGCACGACAG
GTGATCGCAGATGCCGATGAGTACGGCGCAGCTGTGCTAGGAGTTCCAAT
GAAGGCTACCGTCAAG
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Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig1092:32415..37780+

>mRNA_E-siliculosus-1a_F_contig1092.640.1 ID=mRNA_E-siliculosus-1a_F_contig1092.640.1|Name=mRNA_E-siliculosus-1a_F_contig1092.640.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=1188bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1092:32415..37780+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
ATGGTAGCATCGCTGACATCGATCGCGGCCTTGCTTGCCCTTGTCTGGCC
CGCCTCGGCGTTTGTGAAGCCAAATGTTGGCAGCTCCCTCCAGATGGTAG
CATCGCTGACATCGATCGCGGCCTTGCTTGCCCTTGTCTGGCCCGCCTCG
GCGTTTGTGAAGCCAAATGTTGGCAGCTCCCTCCAGGCGAGGACCAGAGG
TGTGAGGGACGCCGCTCCTGCATCGGCGCCTCGACTGTCGATGGCTGCTG
GGCCCACGGCGAGGACCAGAGGTGTGAGGGACGCCGCTCCTGCATCGGCG
CCTCGACTGTCGATGGCTGCTGGGCCCACGGTGGAAAACGTGGCAGCTGT
TGTCCTTGCCGGAGGCGTCGGCAAGCGGATGGAGGCAGGCATGTGGAAAA
CGTGGCAGCTGTTGTCCTTGCCGGAGGCGTCGGCAAGCGGATGGAGGCAG
GCATGCCGAAGCAATTCCTGGAGCTGCAAGGGGAGACCGTTTTGGAGCAC
AGCCTCAAGCTCTTCCTCAGGCTTAAGGGAGTGTCACAGCCGAAGCAATT
CCTGGAGCTGCAAGGGGAGACCGTTTTGGAGCACAGCCTCAAGCTCTTCC
TCAGGCTTAAGGGAGTGTCACAGCTTATCCTCGTCCTGGACGAGCAGTAC
CGCCCGATGCTGCAGGATCTTCAGAAGCGAGAAGGGAGGCTGGTCTTCGC
AGACCCGGGATTGCTTATCCTCGTCCTGGACGAGCAGTACCGCCCGATGC
TGCAGGATCTTCAGAAGCGAGAAGGGAGGCTGGTCTTCGCAGACCCGGGA
TTGGAACGGCAGCACTCTGTGTACAACGCTCTCCAGAAAGTCGAGGACGG
TTCTTCCCTCGTGTGCATCCACGATGCGGCGCGACCTTTGGTAACCAAGG
CTGCGGTAAAAAAGGCAAGCTGTTACTTTGGAACGGCAGCACTCTGTGTA
CAACGCTCTCCAGAAAGTCGAGGACGGTTCTTCCCTCGTGTGCATCCACG
ATGCGGCGCGACCTTTGGTAACCAAGGCTGCGGTAAAAAAGGCAAGCTGT
TACTTTGTGATCGCAGATGCCGATGAGTACGGCGCAGCTGTGCTAGGAGT
TCCAATGAAGGCTACCGTCAAGGTGATCGCAGATGCCGATGAGTACGGCG
CAGCTGTGCTAGGAGTTCCAATGAAGGCTACCGTCAAG
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