prot_E-siliculosus-1a_F_contig1092.640.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig1092.640.1
Unique Nameprot_E-siliculosus-1a_F_contig1092.640.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length198
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1092.640.1 vs. uniprot
Match: D7G3Q7_ECTSI (2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3Q7_ECTSI)

HSP 1 Score: 347 bits (891), Expect = 9.140e-118
Identity = 193/198 (97.47%), Postives = 193/198 (97.47%), Query Frame = 0
Query:    1 MVASLTSIAALLALVWPASAFVKPNVGSSLQARTRGVRDAAPASAPRLSMAAGPTVENVAAVVLAGGVGKRMEAGMPKQFLELQGETVLEHSLKLFLRLKGVSQLILVLDEQYRPMLQDLQKREGRLVFADPGLERQHSVYNALQKVEDGSSLVCIHDAARPLVTKAAVKKASCYFVIADADEYGAAVLGVPMKATVK 198
            MVASLTSIAALLALVWPASAFVKPNVGSSLQARTRGVRDAAPASAPRLSMAAGPTVENVAAVVLAGGVGKRMEAGMPKQFLELQGETVLEHSLKLFLRLKGVSQLILVLDEQYRPMLQDLQKREGRLVFADPGLERQHSVYNALQKVEDGSSLVCIHDAARPLVTKAAVKK     VIADADEYGAAVLGVPMKATVK
Sbjct:    1 MVASLTSIAALLALVWPASAFVKPNVGSSLQARTRGVRDAAPASAPRLSMAAGPTVENVAAVVLAGGVGKRMEAGMPKQFLELQGETVLEHSLKLFLRLKGVSQLILVLDEQYRPMLQDLQKREGRLVFADPGLERQHSVYNALQKVEDGSSLVCIHDAARPLVTKAAVKK-----VIADADEYGAAVLGVPMKATVK 193          
BLAST of mRNA_E-siliculosus-1a_F_contig1092.640.1 vs. uniprot
Match: A0A835YTP8_9STRA (2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YTP8_9STRA)

HSP 1 Score: 179 bits (453), Expect = 1.140e-52
Identity = 92/143 (64.34%), Postives = 119/143 (83.22%), Query Frame = 0
Query:   56 VENVAAVVLAGGVGKRMEAGMPKQFLELQGETVLEHSLKLFLRLKGVSQLILVLDEQYRPMLQDLQKREGRLVFADPGLERQHSVYNALQKVEDGSSLVCIHDAARPLVTKAAVKKASCYFVIADADEYGAAVLGVPMKATVK 198
            V++VAA++LAGGVG RM+A MPKQFLEL+G+ VL+HSL+LF  L G+S++ILV+D+QYR   + +Q+ E RLVFADPG+ERQ+SV+N LQ V +G+S+VCIHDAARPLVTK  +     Y V+ DA+E+GAAVLGVPMKATVK
Sbjct:   48 VQDVAAIILAGGVGSRMKANMPKQFLELRGKPVLQHSLELFRSLDGISRIILVIDQQYRDQFKTMQEEEPRLVFADPGIERQNSVFNGLQAVHEGASVVCIHDAARPLVTKECI-----YQVLRDAEEHGAAVLGVPMKATVK 185          
BLAST of mRNA_E-siliculosus-1a_F_contig1092.640.1 vs. uniprot
Match: A0A7S2V2L3_9STRA (2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V2L3_9STRA)

HSP 1 Score: 163 bits (412), Expect = 2.940e-46
Identity = 91/143 (63.64%), Postives = 107/143 (74.83%), Query Frame = 0
Query:   56 VENVAAVVLAGGVGKRMEAGMPKQFLELQGETVLEHSLKLFLRLKGVSQLILVLDEQYRPMLQDLQKREGRLVFADPGLERQHSVYNALQKVEDGSSLVCIHDAARPLVTKAAVKKASCYFVIADADEYGAAVLGVPMKATVK 198
            VE V+ V+LAGGVG RM+A  PKQFLEL G  VL+H++ LF  L+GV Q+ILVLDEQYRP  Q +   E RL FADPG ERQ SV N L  V +G+SLVC+HDAARPLVT   + +     VIADA+E+GAAVLGVPMKATVK
Sbjct:   64 VEKVSVVLLAGGVGSRMKADRPKQFLELLGRPVLDHTIDLFRSLRGVDQIILVLDEQYRPNYQSVSDEEPRLKFADPGKERQDSVCNGLSLVGEGASLVCVHDAARPLVTPENIHQ-----VIADAEEHGAAVLGVPMKATVK 201          
BLAST of mRNA_E-siliculosus-1a_F_contig1092.640.1 vs. uniprot
Match: A0A6H5L038_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L038_9PHAE)

HSP 1 Score: 156 bits (394), Expect = 2.980e-46
Identity = 83/85 (97.65%), Postives = 84/85 (98.82%), Query Frame = 0
Query:   50 MAAGPTVENVAAVVLAGGVGKRMEAGMPKQFLELQGETVLEHSLKLFLRLKGVSQLILVLDEQYRPMLQDLQKREGRLVFADPGL 134
            MAAGPTVENVAAVVLAGGVGKRMEA MPKQFLELQGETVLEHSLKLFLRLKGVSQLILVLDEQYRPML+DLQKREGRLVFADPGL
Sbjct:    1 MAAGPTVENVAAVVLAGGVGKRMEADMPKQFLELQGETVLEHSLKLFLRLKGVSQLILVLDEQYRPMLRDLQKREGRLVFADPGL 85          
BLAST of mRNA_E-siliculosus-1a_F_contig1092.640.1 vs. uniprot
Match: A0A7S1UCG6_9STRA (Hypothetical protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UCG6_9STRA)

HSP 1 Score: 155 bits (392), Expect = 1.820e-43
Identity = 94/174 (54.02%), Postives = 116/174 (66.67%), Query Frame = 0
Query:   25 NVGSSLQARTRGVRDAAPASAPRLSMAAGPTVENVAAVVLAGGVGKRMEAGMPKQFLELQGETVLEHSLKLFLRLKGVSQLILVLDEQYRPMLQDLQKREGRLVFADPGLERQHSVYNALQKVEDGSSLVCIHDAARPLVTKAAVKKASCYFVIADADEYGAAVLGVPMKATVK 198
             +GS  +A    +   APA AP+          +VA V+LAGGVG RM+A  PKQFL L G+ VLEH+++LF  ++GVSQ++LVLDEQYR   +     + R VFADPG ERQ SV N L KV DG+SLV +HDAARPLVT A +     Y V+ D  E+GAAVLGVPMKATVK
Sbjct:   26 RLGSGRRASALRMSAKAPAGAPK----------DVAVVLLAGGVGSRMKADRPKQFLTLAGKPVLEHTIELFRGIEGVSQIVLVLDEQYRGEWKKFAAADERFVFADPGKERQDSVENGLSKVVDGASLVAVHDAARPLVTPAEI-----YNVLMDGVEHGAAVLGVPMKATVK 184          
BLAST of mRNA_E-siliculosus-1a_F_contig1092.640.1 vs. uniprot
Match: A0A7S2DHR1_9STRA (2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DHR1_9STRA)

HSP 1 Score: 155 bits (391), Expect = 3.610e-43
Identity = 82/143 (57.34%), Postives = 106/143 (74.13%), Query Frame = 0
Query:   56 VENVAAVVLAGGVGKRMEAGMPKQFLELQGETVLEHSLKLFLRLKGVSQLILVLDEQYRPMLQDLQKREGRLVFADPGLERQHSVYNALQKVEDGSSLVCIHDAARPLVTKAAVKKASCYFVIADADEYGAAVLGVPMKATVK 198
            VENVA ++LAGGVG RM+A  PKQFLEL G+ VL H+L+LFL L G+++++LV+D +Y    + LQ    +L+FA PG ERQ SV+N LQK+ D + +VCIHDAARPL+T  A+     Y V+ D  E+GAAVLGVPMKATVK
Sbjct:   66 VENVAVILLAGGVGSRMKANQPKQFLELLGKPVLMHTLELFLSLDGIARVVLVIDAKYESQFEPLQALNPKLIFAPPGKERQDSVFNGLQKINDDAPVVCIHDAARPLITPEAI-----YKVLRDGIEHGAAVLGVPMKATVK 203          
BLAST of mRNA_E-siliculosus-1a_F_contig1092.640.1 vs. uniprot
Match: A0A7S0Y4H2_HEMAN (Hypothetical protein (Fragment) n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S0Y4H2_HEMAN)

HSP 1 Score: 150 bits (378), Expect = 7.380e-42
Identity = 84/151 (55.63%), Postives = 106/151 (70.20%), Query Frame = 0
Query:   48 LSMAAGPTVENVAAVVLAGGVGKRMEAGMPKQFLELQGETVLEHSLKLFLRLKGVSQLILVLDEQYRPMLQDLQKREGRLVFADPGLERQHSVYNALQKVEDGSSLVCIHDAARPLVTKAAVKKASCYFVIADADEYGAAVLGVPMKATVK 198
            L  AA   V+ V  ++LAGGVG RM+AG PKQFLEL+G+ +L HSL LF  L+GV  + +V+ E+YR M  D+ K++ R+ FA PG ERQ SV+N LQ+V D ++LV +HDAARPLVT   V     Y V  DA E+GAAVL VPMKATVK
Sbjct:   72 LRAAASSGVDGVGVILLAGGVGSRMKAGKPKQFLELEGKPMLMHSLDLFRGLEGVDSITIVIAEEYRDMFDDIVKKDDRIRFAGPGKERQDSVFNGLQQVPDSATLVAVHDAARPLVTPEEV-----YNVFRDAKEHGAAVLAVPMKATVK 217          
BLAST of mRNA_E-siliculosus-1a_F_contig1092.640.1 vs. uniprot
Match: A0A0G4G666_VITBC (2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4G666_VITBC)

HSP 1 Score: 150 bits (379), Expect = 2.550e-41
Identity = 88/157 (56.05%), Postives = 110/157 (70.06%), Query Frame = 0
Query:   42 PASAPRLSMAAGPTVENVAAVVLAGGVGKRMEAGMPKQFLELQGETVLEHSLKLFLRLKGVSQLILVLDEQYRPMLQDLQKREGRLVFADPGLERQHSVYNALQKVEDGSSLVCIHDAARPLVTKAAVKKASCYFVIADADEYGAAVLGVPMKATVK 198
            P  A  LS +    V+NV  ++LAGGVGKRM A  PKQFLEL G+ VLEHS++LFL L GV  ++LVLDE YR   +    R+ R+VFA PG ERQ SV+N LQ + +G S+VCIHD+ARPLVT+  V +      I DA+ +GAAV+GVPMKATVK
Sbjct:   48 PLLAASLSPSVDGHVDNVGVILLAGGVGKRMNADRPKQFLELMGKPVLEHSVELFLTLPGVKHIVLVLDEAYRDTFRG---RDERIVFAPPGEERQDSVWNGLQAMPEGVSVVCIHDSARPLVTQGTVLQC-----IRDANTHGAAVVGVPMKATVK 196          
BLAST of mRNA_E-siliculosus-1a_F_contig1092.640.1 vs. uniprot
Match: A0A7S0VEW7_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Hemiselmis tepida TaxID=464990 RepID=A0A7S0VEW7_9CRYP)

HSP 1 Score: 147 bits (372), Expect = 1.430e-40
Identity = 83/151 (54.97%), Postives = 104/151 (68.87%), Query Frame = 0
Query:   48 LSMAAGPTVENVAAVVLAGGVGKRMEAGMPKQFLELQGETVLEHSLKLFLRLKGVSQLILVLDEQYRPMLQDLQKREGRLVFADPGLERQHSVYNALQKVEDGSSLVCIHDAARPLVTKAAVKKASCYFVIADADEYGAAVLGVPMKATVK 198
            L  AA   V+ V  ++LAGGVG RM+AG PKQFLELQG+ +L HSL LF  L+G+  + +V+ E+YR M  D+ K + R+ FA PG ERQ SV+N LQ+V + + LV +HDAARPLVT   V     Y V  DA E+GAAVL VPMKATVK
Sbjct:   49 LRSAASSGVDGVGVILLAGGVGSRMKAGKPKQFLELQGKPMLMHSLDLFRGLEGIESITIVIAEEYRDMFDDIVKADDRIRFAGPGKERQDSVFNGLQQVPESAKLVAVHDAARPLVTPEEV-----YNVFRDAKEHGAAVLAVPMKATVK 194          
BLAST of mRNA_E-siliculosus-1a_F_contig1092.640.1 vs. uniprot
Match: A0A7S4UD44_GUITH (2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase n=2 Tax=Guillardia theta TaxID=55529 RepID=A0A7S4UD44_GUITH)

HSP 1 Score: 147 bits (370), Expect = 9.760e-40
Identity = 76/143 (53.15%), Postives = 111/143 (77.62%), Query Frame = 0
Query:   56 VENVAAVVLAGGVGKRMEAGMPKQFLELQGETVLEHSLKLFLRLKGVSQLILVLDEQYRPMLQDLQKREGRLVFADPGLERQHSVYNALQKVEDGSSLVCIHDAARPLVTKAAVKKASCYFVIADADEYGAAVLGVPMKATVK 198
            +++V+ ++LAGGVG RM+A  PKQFLEL+G+ +L HSL+LF++++GV+++++V+  +YR  L D+ K++ R+ FA+PG ERQ SV+N LQ+    +SL+CIHDAARPLVT+  +   SC   + DA E+GAAVL VPMKATVK
Sbjct:   89 IDDVSVILLAGGVGSRMKADRPKQFLELEGKPILRHSLELFMKIQGVTRIVIVIAPEYRDSLADVTKKDARICFAEPGKERQDSVFNGLQETALDTSLICIHDAARPLVTEQEIL--SC---MNDALEHGAAVLAVPMKATVK 226          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1092.640.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G3Q7_ECTSI9.140e-11897.472-C-methyl-D-erythritol 4-phosphate cytidylyltrans... [more]
A0A835YTP8_9STRA1.140e-5264.342-C-methyl-D-erythritol 4-phosphate cytidylyltrans... [more]
A0A7S2V2L3_9STRA2.940e-4663.642-C-methyl-D-erythritol 4-phosphate cytidylyltrans... [more]
A0A6H5L038_9PHAE2.980e-4697.65Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S1UCG6_9STRA1.820e-4354.02Hypothetical protein n=2 Tax=Phaeomonas parva TaxI... [more]
A0A7S2DHR1_9STRA3.610e-4357.342-C-methyl-D-erythritol 4-phosphate cytidylyltrans... [more]
A0A7S0Y4H2_HEMAN7.380e-4255.63Hypothetical protein (Fragment) n=1 Tax=Hemiselmis... [more]
A0A0G4G666_VITBC2.550e-4156.052-C-methyl-D-erythritol 4-phosphate cytidylyltrans... [more]
A0A7S0VEW7_9CRYP1.430e-4054.97Hypothetical protein (Fragment) n=1 Tax=Hemiselmis... [more]
A0A7S4UD44_GUITH9.760e-4053.152-C-methyl-D-erythritol 4-phosphate cytidylyltrans... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR029044Nucleotide-diphospho-sugar transferasesGENE3D3.90.550.10coord: 55..198
e-value: 1.2E-38
score: 134.8
IPR029044Nucleotide-diphospho-sugar transferasesSUPERFAMILY53448Nucleotide-diphospho-sugar transferasescoord: 59..198
IPR034683Cytidylyltransferase IspD/TarIPFAMPF01128IspDcoord: 59..198
e-value: 8.3E-30
score: 104.2
NoneNo IPR availablePANTHERPTHR32125FAMILY NOT NAMEDcoord: 57..198
NoneNo IPR availablePANTHERPTHR32125:SF42-C-METHYL-D-ERYTHRITOL 4-PHOSPHATE CYTIDYLYLTRANSFERASE, CHLOROPLASTICcoord: 57..198
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 21..198
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 16..20
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..20
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 4..15
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..3
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..20
score: 0.9
IPR0182944-diphosphocytidyl-2C-methyl-D-erythritol synthase, conserved sitePROSITEPS01295ISPDcoord: 154..161

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig1092contigE-siliculosus-1a_F_contig1092:32415..37780 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig1092.640.1mRNA_E-siliculosus-1a_F_contig1092.640.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig1092 32415..37780 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig1092.640.1 ID=prot_E-siliculosus-1a_F_contig1092.640.1|Name=mRNA_E-siliculosus-1a_F_contig1092.640.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=198bp
MVASLTSIAALLALVWPASAFVKPNVGSSLQARTRGVRDAAPASAPRLSM
AAGPTVENVAAVVLAGGVGKRMEAGMPKQFLELQGETVLEHSLKLFLRLK
GVSQLILVLDEQYRPMLQDLQKREGRLVFADPGLERQHSVYNALQKVEDG
SSLVCIHDAARPLVTKAAVKKASCYFVIADADEYGAAVLGVPMKATVK
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR018294ISPD_synthase_CS
IPR034683IspD/TarI
IPR029044Nucleotide-diphossugar_trans