mRNA_E-siliculosus-1a_F_contig1091.631.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-siliculosus-1a_F_contig1091.631.1
Unique NamemRNA_E-siliculosus-1a_F_contig1091.631.1
TypemRNA
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1091.631.1 vs. uniprot
Match: D7FWE2_ECTSI (WD40 repeat protein flagellar associated protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWE2_ECTSI)

HSP 1 Score: 545 bits (1404), Expect = 1.230e-181
Identity = 324/328 (98.78%), Postives = 325/328 (99.09%), Query Frame = 1
Query:    1 MFIYLSKKIAIPNGTKLDSLAWNPAQGWIACGGSNGLTKVLKLDSVGGGGAGGAPGKEVNAESGRGXXXXXXXXXXSNLSMNQTLEGHEGSVVCVTWNATYSKLTTCDEQGLIIVWMLHKGLWFEEMINNRHKSAVRDMKWTSNGQKICIIYADGAVIVGSVDGNRLWGKELDMGLQNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRAMTLPEGAEITPDSTGANSPTSGSKKKPAFLRDEKDDXXXXXXXXXAKGGEGKNGGRKRGEGKKGRVIFVDWYDGAEGLLHPQVPTLCIALDGGFVQLSRGVDDNAAPLVVDAHMRIRQA 984
            MFIYLSKKIAIPNGTKLDSLAWNPAQGWIACGGSNGLTKVLKLDSVGGGGAGGAPGKEVNAE+GRGXXXXXXXXXXSNLSMNQTLEGHEGSVVCVTWNATYSKLTTCDEQGLIIVWMLHKGLWFEEMINNRHKSAVRDMKWTSNGQKICIIYADGAVIVGSVDGNRLWGKELDMGLQNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRAMTLPEGAEITPDSTGANSPTSGSKKKPAFLRDEKD XXXXXXX  AKGGEGKNGGRKRGEGKKGRVIFVDWYDGAEGLLHPQVPTLCIALDGGFVQLSRGVDDNAAPLVVDAHMRIRQA
Sbjct:    1 MFIYLSKKIAIPNGTKLDSLAWNPAQGWIACGGSNGLTKVLKLDSVGGGGAGGAPGKEVNAENGRGXXXXXXXXXXSNLSMNQTLEGHEGSVVCVTWNATYSKLTTCDEQGLIIVWMLHKGLWFEEMINNRHKSAVRDMKWTSNGQKICIIYADGAVIVGSVDGNRLWGKELDMGLQNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRAMTLPEGAEITPDSTGANSPTSGSKKKPAFLRDEKDXXXXXXXXNEAKGGEGKNGGRKRGEGKKGRVIFVDWYDGAEGLLHPQVPTLCIALDGGFVQLSRGVDDNAAPLVVDAHMRIRQA 328          
BLAST of mRNA_E-siliculosus-1a_F_contig1091.631.1 vs. uniprot
Match: A0A6H5L041_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L041_9PHAE)

HSP 1 Score: 374 bits (961), Expect = 1.250e-116
Identity = 202/254 (79.53%), Postives = 203/254 (79.92%), Query Frame = 1
Query:  277 VCVTWNATYSKLTTCDEQGLIIVWMLHKGLWFEEMINNRHKSAVRDMKWTSNGQKICIIYADGAVIVGSVDGNRLWGKELDMGLQNXXXXXXXXXXXXXXXXXXXXXXXXXXXXX------------------RAMTLPEGAEITPDSTGANSPTSGSKKKPAFLRDEKDDXXXXXXXXXAKGGEGKNGGRKRGEGKKGRVIFVDWYDGAEGLLHPQVPTLCIALDGGFVQLSRGVDDNAAPLVVDAHMRIRQA 984
            VCVTWNATYSKLTTCDEQGLIIVWMLHKGLWFEEMINNRHKSAVRDMKWTS+GQKICIIYADGAVIVGSVDGNRLWGKELDMGLQN                                               RAMTLPEGAEITPDSTGANSPTSGSKKKPAFLRDEKD XXXXXXXX  KGGEGK GGRKRGEGKKGRVIFVDWYDGAEGLLHPQVPTLCIALDGGFVQLSRGVDDNAAPLVVDAHMRIRQA
Sbjct:   15 VCVTWNATYSKLTTCDEQGLIIVWMLHKGLWFEEMINNRHKSAVRDMKWTSDGQKICIIYADGAVIVGSVDGNRLWGKELDMGLQNVEWSPDGRRKAILIYVQPTLHLTTYTRILFVTAVGEVLIYDAQGKRLRAMTLPEGAEITPDSTGANSPTSGSKKKPAFLRDEKDXXXXXXXXXEVKGGEGKTGGRKRGEGKKGRVIFVDWYDGAEGLLHPQVPTLCIALDGGFVQLSRGVDDNAAPLVVDAHMRIRQA 268          
BLAST of mRNA_E-siliculosus-1a_F_contig1091.631.1 vs. uniprot
Match: A0A835YIA3_9STRA (WD40 repeat protein flagellar associated protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YIA3_9STRA)

HSP 1 Score: 288 bits (738), Expect = 4.240e-85
Identity = 187/330 (56.67%), Postives = 219/330 (66.36%), Query Frame = 1
Query:    1 MFIYLSKKIAIPNGTKLDSLAWNPAQGWIACGGSNGLTKVLKLDSVGGGGAGGAPGKEVNAESGRGXXXXXXXXXXSNLSMNQTLEGHEGSVVCVTWNATYSKLTTCDEQGLIIVWMLHKGLWFEEMINNRHKSAVRDMKWTSNGQKICIIYADGAVIVGSVDGNRLWGKELDMGLQNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRAMTLPEGAEITPDSTGANSPTSGSKKKPAFLRDEKDDXXXXXXXXXAKGGEGKNGGRKRGEGKKGRVIF--VDWYDGAEGLLHPQVPTLCIALDGGFVQLSRGVDDNAAPLVVDAHMRIRQA 984
            MFI+LSKKIAIP G KL SLAWNP QGWIACGG +GL KVLKL+S        A G++   ++G            S+LSMNQTLEGH GSV+CVTWN+ YSKLTT DE GLIIVWMLHKG+W+EEMINNR KS VRDMKWTS+GQKICI+Y DGAVIVGSVDGNRLWGKELD+ LQ+  XXXXXXXXXXXXXXXXX          + M LP        +  +  P+ GS ++     D+        XXXX +G    NG  + G G     +   +DWYDGAEG +H   PTL IA   G VQ+ R  DD A+P+VVDA MR+R A
Sbjct:    1 MFIFLSKKIAIPKGIKLHSLAWNPDQGWIACGGESGLMKVLKLES--------ATGQKDPQKAG------------SDLSMNQTLEGHNGSVMCVTWNSNYSKLTTSDENGLIIVWMLHKGMWYEEMINNRGKSVVRDMKWTSDGQKICIVYEDGAVIVGSVDGNRLWGKELDIYLQHVEXXXXXXXXXXXXXXXXXHIYDAAGAKVKLMQLPAATL----AAASKPPSDGSARESKHAGDD--------XXXXDEGYARHNGTSRGGNGASSPALIADIDWYDGAEGYVHQAAPTLAIAFVNGTVQIGRHTDD-ASPVVVDAGMRVRLA 297          
BLAST of mRNA_E-siliculosus-1a_F_contig1091.631.1 vs. uniprot
Match: A0A7S0WI31_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Pyramimonas obovata TaxID=1411642 RepID=A0A7S0WI31_9CHLO)

HSP 1 Score: 238 bits (606), Expect = 7.460e-75
Identity = 119/176 (67.61%), Postives = 132/176 (75.00%), Query Frame = 1
Query:    1 MFIYLSKKIAIPNGTKLDSLAWNPAQGWIACGGSNGLTKVLKLDSVGGGGAGGAPGKEVNAESGRGXXXXXXXXXXSNLSMNQTLEGHEGSVVCVTWNATYSKLTTCDEQGLIIVWMLHKGLWFEEMINNRHKSAVRDMKWTSNGQKICIIYADGAVIVGSVDGNRLWGKELDMGL 528
            MFIYLSKKIAIPNG +L  ++WN  QGWIACGG NGL KVLKL+S         P K+  A+ G            SNLSMNQTLEGH GSV+ V WN  Y KLTT D+ GLIIVWMLHKG+WFEEMINNR+KS VRDMKWTS+GQKICI+Y DGAVIVGSVDGNRLWGKEL + L
Sbjct:    1 MFIYLSKKIAIPNGVRLKCVSWNSEQGWIACGGDNGLLKVLKLESA-------TPTKDAKAKGG---------PAASNLSMNQTLEGHNGSVMVVNWNENYRKLTTSDQYGLIIVWMLHKGMWFEEMINNRNKSVVRDMKWTSDGQKICIVYEDGAVIVGSVDGNRLWGKELALSL 160          
BLAST of mRNA_E-siliculosus-1a_F_contig1091.631.1 vs. uniprot
Match: A0A7S0LYC8_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Cryptomonas curvata TaxID=233186 RepID=A0A7S0LYC8_9CRYP)

HSP 1 Score: 235 bits (600), Expect = 1.140e-72
Identity = 144/330 (43.64%), Postives = 165/330 (50.00%), Query Frame = 1
Query:    1 MFIYLSKKIAIPNGTKLDSLAWNPAQGWIACGGSNGLTKVLKLDSVGGGGAGGAPGKEVNAESGRGXXXXXXXXXXSNLSMNQTLEGHEGSVVCVTWNATYSKLTTCDEQGLIIVWMLHKGLWFEEMINNRHKSAVRDMKWTSNGQKICIIYADGAVIVGSVDGNRLWGKELDMGLQNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRAMTLPEGAEITPDSTGANSPTSGSKKKPAFLRDEKDDXXXXXXXXXAKGGEGKNGGRKRGEGKKGRVIFVDWYDGAEGLLHPQVPTLCIALDGGFVQLSRGVDDNAAPLVVDAHMRIRQASA 990
            MFIYL+KKIAIPNG  L    WN  QGWIACGG  GL KVLKL+S G        GKE                  SNL+MNQTLEGH   V+C  WN  + KLTT DE GLIIVWMLHKGLWFEEMINNR+KS VRDMKW ++GQKICI+Y DGAVIVGSVDGNRLWGK+L M LQ                                   P+G     D  G     +   + P F  D                                 V  + WY+G EGL+ P  PTL IA D G VQL     D   P+++D  +R  +  A
Sbjct:    2 MFIYLNKKIAIPNGVVLRCCYWNADQGWIACGGEGGLLKVLKLESAG-------KGKERGIAG------------TSNLTMNQTLEGHSEPVICAAWNEAFKKLTTSDESGLIIVWMLHKGLWFEEMINNRNKSVVRDMKWNADGQKICIVYEDGAVIVGSVDGNRLWGKDLKMQLQYVEWSPDGKLIL--------------------FVTPQGVVHVYDGLG-----NFVSQAPLFSDDS-----------------------------TATVAGLCWYNGLEGLVDPNAPTLAIAFDNGRVQLMTSETDEK-PVLIDTGLRPSEEKA 257          
BLAST of mRNA_E-siliculosus-1a_F_contig1091.631.1 vs. uniprot
Match: A0A2J7ZHB6_9CHLO (WD repeat domain-containing protein (Fragment) n=1 Tax=Tetrabaena socialis TaxID=47790 RepID=A0A2J7ZHB6_9CHLO)

HSP 1 Score: 231 bits (590), Expect = 2.540e-72
Identity = 118/176 (67.05%), Postives = 130/176 (73.86%), Query Frame = 1
Query:    1 MFIYLSKKIAIPNGTKLDSLAWNPAQGWIACGGSNGLTKVLKLDSVGGGGAGGAPGKEVNAESGRGXXXXXXXXXXSNLSMNQTLEGHEGSVVCVTWNATYSKLTTCDEQGLIIVWMLHKGLWFEEMINNRHKSAVRDMKWTSNGQKICIIYADGAVIVGSVDGNRLWGKELDMGL 528
            MFIYLSKKIAIPN  KL  ++WN  QGWIACGG +GL KVL+LD        G   KEV  +   G           NLS+NQTLEGH G+VVCV WN  + KLTT DE GLIIVWMLHKG+WFEEMINNR+KS V+DMKWTSNG+KICIIY DGAVIVGSVDGNRLWGKEL M L
Sbjct:    1 MFIYLSKKIAIPNNVKLRCISWNTDQGWIACGGESGLLKVLRLD--------GTTSKEVKGKKEGGAAG-------GNLSLNQTLEGHNGAVVCVCWNNAFQKLTTSDEFGLIIVWMLHKGMWFEEMINNRNKSVVKDMKWTSNGEKICIIYEDGAVIVGSVDGNRLWGKELGMEL 161          
BLAST of mRNA_E-siliculosus-1a_F_contig1091.631.1 vs. uniprot
Match: A0A7S0HEY4_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Phaeocystis antarctica TaxID=33657 RepID=A0A7S0HEY4_9EUKA)

HSP 1 Score: 232 bits (592), Expect = 3.170e-72
Identity = 118/176 (67.05%), Postives = 127/176 (72.16%), Query Frame = 1
Query:    1 MFIYLSKKIAIPNGTKLDSLAWNPAQGWIACGGSNGLTKVLKLDSVGGGGAGGAPGKEVNAESGRGXXXXXXXXXXSNLSMNQTLEGHEGSVVCVTWNATYSKLTTCDEQGLIIVWMLHKGLWFEEMINNRHKSAVRDMKWTSNGQKICIIYADGAVIVGSVDGNRLWGKELDMGL 528
            MF+YLSKKIAIPNG KL SL WN   GWI CGG NGL KVLKLDS          G+  +   G            SNLSMNQTLEGH GSV+CV WN  Y KLTT D+ GLIIVWMLHKG+WFEEMINNR+KS VR MKWT +GQ+ICIIY DGAVIVGSVDGNRLWGKEL M L
Sbjct:   12 MFVYLSKKIAIPNGVKLKSLNWNTVNGWIVCGGENGLLKVLKLDS----------GRTTDKSKGM--------AAPSNLSMNQTLEGHNGSVMCVCWNENYRKLTTSDQYGLIIVWMLHKGMWFEEMINNRNKSTVRGMKWTPDGQRICIIYEDGAVIVGSVDGNRLWGKELKMQL 169          
BLAST of mRNA_E-siliculosus-1a_F_contig1091.631.1 vs. uniprot
Match: A0A7S2BR82_9STRA (Hypothetical protein (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2BR82_9STRA)

HSP 1 Score: 229 bits (585), Expect = 3.360e-72
Identity = 117/171 (68.42%), Postives = 130/171 (76.02%), Query Frame = 1
Query:   16 SKKIAIPNGTKLDSLAWNPAQGWIACGGSNGLTKVLKLDSVGGGGAGGAPGKEVNAESGRGXXXXXXXXXXSNLSMNQTLEGHEGSVVCVTWNATYSKLTTCDEQGLIIVWMLHKGLWFEEMINNRHKSAVRDMKWTSNGQKICIIYADGAVIVGSVDGNRLWGKELDMGL 528
            SKKIAIPNG  L SLAWNP QGWIACGG +GL KVLKL+     G       +  A++G            SNLSMNQTL+GH G VVCVTWNA Y KLTT DE GLIIVWMLHKG+WFEEMINNR+KS V+DMKWT++G KICI+YADGAVIVGSVDGNRLWGKEL+M L
Sbjct:    1 SKKIAIPNGINLYSLAWNPDQGWIACGGDSGLLKVLKLELTTRAG-------DQKAKTG--------VAAPSNLSMNQTLDGHHGKVVCVTWNALYRKLTTSDESGLIIVWMLHKGMWFEEMINNRNKSVVKDMKWTADGSKICIVYADGAVIVGSVDGNRLWGKELEMQL 156          
BLAST of mRNA_E-siliculosus-1a_F_contig1091.631.1 vs. uniprot
Match: A0A813B5A4_9DINO (WDR35 protein n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A813B5A4_9DINO)

HSP 1 Score: 231 bits (588), Expect = 4.280e-71
Identity = 118/176 (67.05%), Postives = 128/176 (72.73%), Query Frame = 1
Query:    1 MFIYLSKKIAIPNGTKLDSLAWNPAQGWIACGGSNGLTKVLKLDSVGGGGAGGAPGKEVNAESGRGXXXXXXXXXXSNLSMNQTLEGHEGSVVCVTWNATYSKLTTCDEQGLIIVWMLHKGLWFEEMINNRHKSAVRDMKWTSNGQKICIIYADGAVIVGSVDGNRLWGKELDMGL 528
            MFIYLSKKIAIPN T+L SL+WNP  GWIACGG NGL KVLKLD V          K+   +              SNLSMNQTLEGH G V+ VTWNA + KLTT D+ GLIIVWMLHKG WFEEMINNR+KS VRDMKWTS+G KICIIY DGAVIVGSVDGNR+WGKEL   L
Sbjct:    1 MFIYLSKKIAIPNQTRLRSLSWNPEHGWIACGGDNGLLKVLKLDQVS---------KDAKTKG---------VAAPSNLSMNQTLEGHNGGVMVVTWNAQHKKLTTSDQYGLIIVWMLHKGTWFEEMINNRNKSVVRDMKWTSDGLKICIIYEDGAVIVGSVDGNRVWGKELKTNL 158          
BLAST of mRNA_E-siliculosus-1a_F_contig1091.631.1 vs. uniprot
Match: A0A397CPU1_9STRA (ANAPC4_WD40 domain-containing protein n=3 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397CPU1_9STRA)

HSP 1 Score: 243 bits (620), Expect = 1.930e-70
Identity = 168/318 (52.83%), Postives = 197/318 (61.95%), Query Frame = 1
Query:    1 MFIYLSKKIAIPNGTKLDSLAWNPAQGWIACGGSNGLTKVLKLDSVGGGGAGGAPGKEVNAESGRGXXXXXXXXXXSNLSMNQTLEGHEGSVVCVTWNATYSKLTTCDEQGLIIVWMLHKGLWFEEMINNRHKSAVRDMKWTSNGQKICIIYADGAVIVGSVDGNRLWGKELDMGLQNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRAMTLPEGAEITPDSTGANSPTSGSKKKPAFLRDEKDDXXXXXXXXXAKGGEGKNGGRKRGEGKKGRVIFVDWYDGAEGLLHPQVPTLCIALDGGFVQLSRGVDDNAAPLV 954
            MFI+LSKKIAIPNG +L   +WNP QGWI+CGG NGL KVLKL+S        AP K+     G            SNL+MNQ+L+GH GSVVC TWNA Y KLTT DE GLIIVWM+H+G+W+EEMINNR+KS V+DMKW+S+GQKICI Y DGAVIVGSVDGNRLWGKE+ + L    XXXXXXXXXXXXXXXXXXXXXXXXXX   MTL                         +  DEKD                          KK ++I + WYDG EG +    PTL IA   G VQ++RG  D++A L+
Sbjct:    1 MFIFLSKKIAIPNGAQLCCSSWNPEQGWISCGGQNGLLKVLKLES--------APTKDGKGPRG--------IAAQSNLTMNQSLDGHAGSVVCATWNANYKKLTTSDENGLIIVWMMHRGMWYEEMINNRNKSVVKDMKWSSDGQKICIAYEDGAVIVGSVDGNRLWGKEMKVELCFVEXXXXXXXXXXXXXXXXXXXXXXXXXXLSNMTL-------------------------YAVDEKD--------------------------KKYKIIGLHWYDGCEGHVSEDAPTLAIAFADGKVQITRGRYDDSAVLI 251          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1091.631.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FWE2_ECTSI1.230e-18198.78WD40 repeat protein flagellar associated protein n... [more]
A0A6H5L041_9PHAE1.250e-11679.53Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835YIA3_9STRA4.240e-8556.67WD40 repeat protein flagellar associated protein n... [more]
A0A7S0WI31_9CHLO7.460e-7567.61Hypothetical protein (Fragment) n=1 Tax=Pyramimona... [more]
A0A7S0LYC8_9CRYP1.140e-7243.64Hypothetical protein (Fragment) n=1 Tax=Cryptomona... [more]
A0A2J7ZHB6_9CHLO2.540e-7267.05WD repeat domain-containing protein (Fragment) n=1... [more]
A0A7S0HEY4_9EUKA3.170e-7267.05Hypothetical protein (Fragment) n=1 Tax=Phaeocysti... [more]
A0A7S2BR82_9STRA3.360e-7268.42Hypothetical protein (Fragment) n=1 Tax=Florenciel... [more]
A0A813B5A4_9DINO4.280e-7167.05WDR35 protein n=1 Tax=Symbiodinium sp. KB8 TaxID=2... [more]
A0A397CPU1_9STRA1.930e-7052.83ANAPC4_WD40 domain-containing protein n=3 Tax=Apha... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig1091contigE-siliculosus-1a_F_contig1091:23660..26504 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-19
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Properties
Property NameValue
Start1
Stop1
Cds size993
Model size993
Exons5
Hectar predicted targeting categoryother localisation
BRITEko00000,ko03036
Best eggNOG OGNA|NA|NA
Best tax levelEukaryota
COG Functional cat.E
EggNOG OGsKOG2041@1,KOG2041@2759
EggNOG free text desc.cellular response to paclitaxel
GOsGO:0003674,GO:0005488,GO:0005543,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005815,GO:0005856,GO:0005929,GO:0005930,GO:0006810,GO:0006928,GO:0006935,GO:0006996,GO:0007017,GO:0007018,GO:0008104,GO:0008150,GO:0008289,GO:0009605,GO:0009987,GO:0010970,GO:0015630,GO:0016043,GO:0022607,GO:0030030,GO:0030031,GO:0030705,GO:0030990,GO:0030991,GO:0031503,GO:0032838,GO:0032991,GO:0033036,GO:0033365,GO:0034613,GO:0035091,GO:0035721,GO:0036064,GO:0040011,GO:0042073,GO:0042221,GO:0042330,GO:0042995,GO:0043167,GO:0043168,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044085,GO:0044422,GO:0044424,GO:0044430,GO:0044441,GO:0044444,GO:0044446,GO:0044463,GO:0044464,GO:0044782,GO:0046907,GO:0050896,GO:0051179,GO:0051234,GO:0051641,GO:0051649,GO:0060271,GO:0061512,GO:0070727,GO:0070925,GO:0071840,GO:0097014,GO:0097730,GO:0099111,GO:0099568,GO:0120025,GO:0120031,GO:0120036,GO:0120038,GO:1905515
KEGG koko:K19674
Seed eggNOG ortholog44056.XP_009032299.1
Seed ortholog evalue1.2e-66
Seed ortholog score260.4
Taxonomic scopeEukaryota
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig1091.631.1prot_E-siliculosus-1a_F_contig1091.631.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalepolypeptideE-siliculosus-1a_F_contig1091 23660..26504 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927593.4094272-CDS-E-siliculosus-1a_F_contig1091:23659..240921622927593.4094272-CDS-E-siliculosus-1a_F_contig1091:23659..24092Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1091 23660..24092 -
1696318602.3102791-CDS-E-siliculosus-1a_F_contig1091:23659..240921696318602.3102791-CDS-E-siliculosus-1a_F_contig1091:23659..24092Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1091 23660..24092 -
1622927593.4232426-CDS-E-siliculosus-1a_F_contig1091:24268..244081622927593.4232426-CDS-E-siliculosus-1a_F_contig1091:24268..24408Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1091 24269..24408 -
1696318602.3228028-CDS-E-siliculosus-1a_F_contig1091:24268..244081696318602.3228028-CDS-E-siliculosus-1a_F_contig1091:24268..24408Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1091 24269..24408 -
1622927593.4354184-CDS-E-siliculosus-1a_F_contig1091:24762..249061622927593.4354184-CDS-E-siliculosus-1a_F_contig1091:24762..24906Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1091 24763..24906 -
1696318602.332525-CDS-E-siliculosus-1a_F_contig1091:24762..249061696318602.332525-CDS-E-siliculosus-1a_F_contig1091:24762..24906Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1091 24763..24906 -
1622927593.4474123-CDS-E-siliculosus-1a_F_contig1091:25308..254671622927593.4474123-CDS-E-siliculosus-1a_F_contig1091:25308..25467Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1091 25309..25467 -
1696318602.3513172-CDS-E-siliculosus-1a_F_contig1091:25308..254671696318602.3513172-CDS-E-siliculosus-1a_F_contig1091:25308..25467Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1091 25309..25467 -
1622927593.4629083-CDS-E-siliculosus-1a_F_contig1091:26387..265041622927593.4629083-CDS-E-siliculosus-1a_F_contig1091:26387..26504Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1091 26388..26504 -
1696318602.3621042-CDS-E-siliculosus-1a_F_contig1091:26387..265041696318602.3621042-CDS-E-siliculosus-1a_F_contig1091:26387..26504Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1091 26388..26504 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-siliculosus-1a_F_contig1091.631.1

>prot_E-siliculosus-1a_F_contig1091.631.1 ID=prot_E-siliculosus-1a_F_contig1091.631.1|Name=mRNA_E-siliculosus-1a_F_contig1091.631.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=331bp
MFIYLSKKIAIPNGTKLDSLAWNPAQGWIACGGSNGLTKVLKLDSVGGGG
AGGAPGKEVNAESGRGGGAAAGGGGGSNLSMNQTLEGHEGSVVCVTWNAT
YSKLTTCDEQGLIIVWMLHKGLWFEEMINNRHKSAVRDMKWTSNGQKICI
IYADGAVIVGSVDGNRLWGKELDMGLQNVEWSPDGRRILFVTAAGEVLIY
DAQGKRLRAMTLPEGAEITPDSTGANSPTSGSKKKPAFLRDEKDDDDDDD
SDDEAKGGEGKNGGRKRGEGKKGRVIFVDWYDGAEGLLHPQVPTLCIALD
GGFVQLSRGVDDNAAPLVVDAHMRIRQASA*
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mRNA from alignment at E-siliculosus-1a_F_contig1091:23660..26504-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-siliculosus-1a_F_contig1091.631.1 ID=mRNA_E-siliculosus-1a_F_contig1091.631.1|Name=mRNA_E-siliculosus-1a_F_contig1091.631.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=2845bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1091:23660..26504- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
ATGTTCATCTACCTGAGCAAAAAGATAGCCATTCCGAATGGGACGAAACT CGACAGCTTGGCGTGGAACCCTGCCCAAGGATGGATCGCGTGCGGCGGAT CTAATGGCCTCACAAAGGTATCAATGACTGCGGGATGACGACGATCGATC GTCGCTTGCCACACAAGATATGCAATACACAGCAGTGCGTATGGGACGTC AACGTGGCAATGTGTCCTGTGTTGCTTCTCAAGTAACACGCTATCGTTGA CATCACGCCAGGAACGCCCTTGATTCAGGCCGTCGTAGCTACGCATGCGG CTAAACCCGAACGCATTCCTTCCATTTCTGGATCTACCAAGCTCGTGGGT AGGGTGTAAGTGCGATGCAGCTCAGGTCCTTCAATAATCTGCCACACTAC TTGTAGCGCTAACACAAATAGAACATCCGGGCACTCTTCTCTTTTGCTGG CATGCCTACAGTAGCCACTCTCCACACATTGGTGTCATCACTGCACGTGT GCTGTATTCTTCGCCATTACATTTTGAGAACGTTGTCAAGCCTAGACTAT ATTTTCACATATGATTCAAGGACAATCCACCCATGACAGTCCCCGTTGGG ATGTGTAGAAGCTGTGGTGCCTGCCCGGTACAAGGTTGTCTGATCACTGC ATGACCGCACCACGTGGCACATACCACATAGACATCGCTGCCGTTGTGAG CCTGTTGATAAGTCTCCTTCATCTCGTTCAGTCACCAAAGGACCTGCGAC TATTGTTCACGGTGCGGGAGTGGCCGGCGATAGGTTGATAAGCGCATTTC GTTCCGATACATGTTAGCGGTGCCTTGGAGACCTTGCTATGCATTCATGC GTTCAAGCTAGACAATACGGGGGGGGGGGGGCGATAGCCTAAAATATCGG AGGCGAGTATCGCAATAATGCTGAAGGTGAACATAAATCGGCAGGGAGTG ATGAACATGAACAGGACGGTGGATCCGGCAAACTCTAATACTATGTACAC GGGCATGCGCTCTCTGAATCGCCACGACCTTGTGTAGGTCCTAAAGCTGG ACTCTGTCGGCGGAGGTGGGGCGGGGGGAGCTCCAGGAAAAGAGGTCAAC GCGGAGAGCGGGAGGGGAGGTGGTGCGGCAGCGGGCGGCGGCGGGGGCTC CAACCTCAGCATGAACCAAACGCTCGAGGGTCACGAGGGTTCTGTGGTGG GCAACAATGCTTTAACCTGTAGACCATATCTCTATTATGGTACCCCACAC AGAAGGGGGATCCAGCGATTTCATGGTACCGGGGTTTTTGTCGCACATGC CATGAATCGGGAGTTATATGGCTCGCTACAGTACTGGAATGGACCCGTCA ACTGTCAAGGTTTGCGTTCGATAGTGACATGAATCCGAAGTCAGCAGCGT CTGGTGTGCGTTCCCGGGCAACCAACAACGTTCCGTTAAAAAAAGAGCTC AAGGCGATATGGGCGGACAAGTTCTCCCAAATCGACGTTAGGGATTTTTT TTAGGCACTAGCAACCTGACAAGACGGTCGTTTCCCTAGGCCAGAACCAG CCGGTGAGCGTAACTCGGTGACGGTTTCGGATTGGCCGACAACTACAGGT GTGTGTCACCTGGAACGCAACGTACTCGAAGCTCACGACATGCGACGAGC AGGGGTTGATCATCGTGTGGATGCTGCACAAGGGCCTTTGGTTCGAAGAG ATGATCAACAACCGACACAAGAGCGCCGTGAGGGACATGAAGGTCAGTCG GAAGGGGAGCACCACCATCGATTCCCCAATGGTTTCCCTCGTCTGAATCG TCACACATCAGCGGATTCGAAGTGGTCTGTTGCCCAATTCGTTGAGGAGG AACTCTTCGGGAGGACTTATGGAGGAGCACATGTTCGACAACGTTTCTAG AAACGTACGGGTTTTGTATCCAACAGATAGTCAAGGATCGATACGAGACC GACTCTAGGGTCCGGGAAGGCTCCCTTGATTTTTAGTACCGTTCATTTAT GGCAGCATCTTACACTAGCCGCTCTTGCAATATCTTTTGAAGCTTGTACG TCTATCCAAACGCGTTGACCGTTTTGTGGATCCTTGCCCTGAGCAGTGGA CGAGCAACGGGCAGAAGATCTGTATCATCTACGCCGACGGGGCCGTGATC GTCGGTTCCGTCGACGGTAACAGGCTCTGGGGTAAGGAACTGGATATGGG GCTACAGAACGTGGAGTGGTCTCCCGATGGTCGCCGGTAAGTCCTAGCCT TCCCCCCAAGGCCTAGAATGTGGAAGTAGCCCCTCCGCTACACAAGAGCC TTGCCCAAACCTTGACACCCCGTTTGTAGCCGAGCCAAGCTGTCCCAGCT AGAAAAGTCATCCTGATCGACGTGCAACCGACTCTCCATCTGACCACATA TTTCTTCACCAGGATTCTCTTTGTTACGGCGGCGGGAGAAGTCCTCATCT ACGACGCCCAGGGCAAGCGGTTGAGGGCCATGACCCTGCCCGAGGGAGCG GAGATCACCCCGGATTCCACCGGTGCCAACAGTCCGACCAGCGGCAGCAA AAAGAAACCGGCGTTTTTGCGAGACGAAAAGGATGACGACGACGACGACG ACTCCGACGACGAAGCGAAAGGCGGCGAGGGGAAAAATGGTGGACGAAAA CGGGGGGAGGGGAAGAAAGGGCGCGTCATTTTCGTGGACTGGTATGACGG TGCCGAGGGACTCCTGCACCCGCAAGTTCCGACGCTGTGCATTGCGCTGG ATGGGGGCTTCGTGCAGTTGAGCAGGGGCGTGGACGACAATGCGGCACCC CTTGTCGTGGACGCGCACATGAGAATTCGGCAGGCGAGTGCATGA
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Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig1091:23660..26504-

>mRNA_E-siliculosus-1a_F_contig1091.631.1 ID=mRNA_E-siliculosus-1a_F_contig1091.631.1|Name=mRNA_E-siliculosus-1a_F_contig1091.631.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=1986bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1091:23660..26504- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
ATGTTCATCTACCTGAGCAAAAAGATAGCCATTCCGAATGGGACGAAACT
CGACAGCTTGGCGTGGAACCCTGCCCAAGGATGGATCGCGTGCGGCGGAT
CTAATGGCCTCACAAAGATGTTCATCTACCTGAGCAAAAAGATAGCCATT
CCGAATGGGACGAAACTCGACAGCTTGGCGTGGAACCCTGCCCAAGGATG
GATCGCGTGCGGCGGATCTAATGGCCTCACAAAGGTCCTAAAGCTGGACT
CTGTCGGCGGAGGTGGGGCGGGGGGAGCTCCAGGAAAAGAGGTCAACGCG
GAGAGCGGGAGGGGAGGTGGTGCGGCAGCGGGCGGCGGCGGGGGCTCCAA
CCTCAGCATGAACCAAACGCTCGAGGGTCACGAGGGTTCTGTGGTCCTAA
AGCTGGACTCTGTCGGCGGAGGTGGGGCGGGGGGAGCTCCAGGAAAAGAG
GTCAACGCGGAGAGCGGGAGGGGAGGTGGTGCGGCAGCGGGCGGCGGCGG
GGGCTCCAACCTCAGCATGAACCAAACGCTCGAGGGTCACGAGGGTTCTG
TGGTGTGTGTCACCTGGAACGCAACGTACTCGAAGCTCACGACATGCGAC
GAGCAGGGGTTGATCATCGTGTGGATGCTGCACAAGGGCCTTTGGTTCGA
AGAGATGATCAACAACCGACACAAGAGCGCCGTGAGGGACATGAAGGTGT
GTGTCACCTGGAACGCAACGTACTCGAAGCTCACGACATGCGACGAGCAG
GGGTTGATCATCGTGTGGATGCTGCACAAGGGCCTTTGGTTCGAAGAGAT
GATCAACAACCGACACAAGAGCGCCGTGAGGGACATGAAGTGGACGAGCA
ACGGGCAGAAGATCTGTATCATCTACGCCGACGGGGCCGTGATCGTCGGT
TCCGTCGACGGTAACAGGCTCTGGGGTAAGGAACTGGATATGGGGCTACA
GAACGTGGAGTGGTCTCCCGATGGTCGCCGTGGACGAGCAACGGGCAGAA
GATCTGTATCATCTACGCCGACGGGGCCGTGATCGTCGGTTCCGTCGACG
GTAACAGGCTCTGGGGTAAGGAACTGGATATGGGGCTACAGAACGTGGAG
TGGTCTCCCGATGGTCGCCGGATTCTCTTTGTTACGGCGGCGGGAGAAGT
CCTCATCTACGACGCCCAGGGCAAGCGGTTGAGGGCCATGACCCTGCCCG
AGGGAGCGGAGATCACCCCGGATTCCACCGGTGCCAACAGTCCGACCAGC
GGCAGCAAAAAGAAACCGGCGTTTTTGCGAGACGAAAAGGATGACGACGA
CGACGACGACTCCGACGACGAAGCGAAAGGCGGCGAGGGGAAAAATGGTG
GACGAAAACGGGGGGAGGGGAAGAAAGGGCGCGTCATTTTCGTGGACTGG
TATGACGGTGCCGAGGGACTCCTGCACCCGCAAGTTCCGACGCTGTGCAT
TGCGCTGGATGGGGGCTTCGTGCAGTTGAGCAGGGGCGTGGACGACAATG
CGGCACCCCTTGTCGTGGACGCGCACATGAGAATTCGGCAGGCGAGTGCA
TGAGATTCTCTTTGTTACGGCGGCGGGAGAAGTCCTCATCTACGACGCCC
AGGGCAAGCGGTTGAGGGCCATGACCCTGCCCGAGGGAGCGGAGATCACC
CCGGATTCCACCGGTGCCAACAGTCCGACCAGCGGCAGCAAAAAGAAACC
GGCGTTTTTGCGAGACGAAAAGGATGACGACGACGACGACGACTCCGACG
ACGAAGCGAAAGGCGGCGAGGGGAAAAATGGTGGACGAAAACGGGGGGAG
GGGAAGAAAGGGCGCGTCATTTTCGTGGACTGGTATGACGGTGCCGAGGG
ACTCCTGCACCCGCAAGTTCCGACGCTGTGCATTGCGCTGGATGGGGGCT
TCGTGCAGTTGAGCAGGGGCGTGGACGACAATGCGGCACCCCTTGTCGTG
GACGCGCACATGAGAATTCGGCAGGCGAGTGCATGA
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