prot_E-siliculosus-1a_F_contig109.618.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig109.618.1
Unique Nameprot_E-siliculosus-1a_F_contig109.618.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length253
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig109.618.1 vs. uniprot
Match: D7FKV3_ECTSI (GOLD domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FKV3_ECTSI)

HSP 1 Score: 465 bits (1196), Expect = 5.850e-165
Identity = 242/252 (96.03%), Postives = 247/252 (98.02%), Query Frame = 0
Query:    1 MNALSAHVLLFLLCCVSATAASTYLIEERAQVCFFRYVEEETKLQAKVFVFKGGNLDIGFSVRGPSQLDDRGNIVHGRTKLKLRKSAKITSENILEDNDDSAELFSGYDYKFDAEKGEYEICLSNDKSYAQEAKHVMLDISEVVEDGATKKHAKDDTMALQDAGGSPKNKEDLAIITNEMDELSKVFEEIKSFQQLERMQLTQRNTAAEDNHASMVQSSVLETVVLLLVGIGQIIFVRKWFSGKGTLLKQWA 252
            MNALSAHVL+FLLCCVSATAASTYLIEERAQVCFFRYVEEETKLQAKVFVFKGGNLDIGFSVRGPSQLDDRGN+VHGRTKLKLRKSAKITSENILEDNDDSAELFSGYDYKFDAEKGEYEICLSNDKSYAQEAKHVMLDISEVVEDGATKKHAKDDT  LQDAGGSPKNKEDLAIIT EMD LSKVFEEIKSFQ+LERMQLTQR TAAEDN+ASMVQSSVLET+VLLLVGIGQIIFVRKWFSGKGTLLKQWA
Sbjct:    1 MNALSAHVLVFLLCCVSATAASTYLIEERAQVCFFRYVEEETKLQAKVFVFKGGNLDIGFSVRGPSQLDDRGNVVHGRTKLKLRKSAKITSENILEDNDDSAELFSGYDYKFDAEKGEYEICLSNDKSYAQEAKHVMLDISEVVEDGATKKHAKDDTTDLQDAGGSPKNKEDLAIITKEMDGLSKVFEEIKSFQELERMQLTQRKTAAEDNNASMVQSSVLETIVLLLVGIGQIIFVRKWFSGKGTLLKQWA 252          
BLAST of mRNA_E-siliculosus-1a_F_contig109.618.1 vs. uniprot
Match: F0Y4F3_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y4F3_AURAN)

HSP 1 Score: 76.3 bits (186), Expect = 4.740e-12
Identity = 62/224 (27.68%), Postives = 100/224 (44.64%), Query Frame = 0
Query:   33 CFFRYVEEETKLQAKVFVFKGGNLDIGFSVRGPSQLDDRGNIVHGRTKLKLRKSAKITSENILEDNDDSAELFSGYDYKFDAEK-----GEYEICLSNDKSYAQEAKHVMLDISEV---VEDGATKKHAKDDTMALQDAGGSP-KNKEDLAIITNEMDELSKVFEEIKSFQQLERMQLTQRNTAAEDNHASMVQSSVLETVVLLLVGIGQIIFVRKWFSGKGTL 247
            C +  +E       +VFV  GGNLD+  ++ GP  + +   +     +      +K  S +++E     A   + +  +  A+      G Y ICL N  S   E K V L +++      DG       +     ++A   P KN E +  I   +  L      +K  Q  ER +L    +  +  H +MV+ S+ ETVV ++  I QI+FVR+WFSGKG +
Sbjct: 2139 CVYEELEARQSASLEVFVLSGGNLDVSVAIDGPFPVVEESGLPRSAHRRGESGLSKPHSAHLVESKQSGAAFAAPHVIEIAADAAVGGGGIYRICLDNAASRISE-KLVTLSVTKAGGAAGDG-------EPVRKKREAEAKPGKNSESIEKIEKRVVSLRSQIAVLKDKQTRERRRLAHHKSLYDAKHNTMVEGSLFETVVYIVCSIFQIVFVRRWFSGKGII 2354          
BLAST of mRNA_E-siliculosus-1a_F_contig109.618.1 vs. uniprot
Match: A0A7S2C741_9STRA (Hypothetical protein n=2 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2C741_9STRA)

HSP 1 Score: 73.6 bits (179), Expect = 7.560e-12
Identity = 53/222 (23.87%), Postives = 101/222 (45.50%), Query Frame = 0
Query:   33 CFFRYVEEETKLQAKVFVFKGGNLDIGFSVRGPSQLDDRGNIVHGRTKLKLRKSAKITSENILEDNDDSAELFSGYDYKFDAEKGEYEICLSNDKSYAQEAKHVMLDISEVVEDGATKKHAKD--DTMALQDAGGSPKNKEDLAIITNEMDELSKVFEEIKSFQQLERMQLTQRNTAAEDNHASMVQSSVLETVVLLLVGIGQIIFVRKWFSGKGTLLKQWA 252
            C    + E  +   ++FV  GG L +   V+GP        ++ G+  +       IT  + +  N    +    + + F +  G Y +C++ND +     K V +D+ + V     K   KD  ++   +D   + K  E++  +   +  L K   +++  Q+ +R +        +D++  MV  S++ET++ +     Q+IFVRKWF+GKG   + WA
Sbjct:   48 CIIEDIPESHQGTLEIFVESGGKLSVHVVVQGP--------LIPGKNGIPEPSPKTITLLDDIVTNGREEDFDDSFFFSFPSRGGSYRVCIANDMNRIA-TKMVQVDLRKSVASQNDKIEDKDAIESSGSKDGKATSKEPEEVLALEKRIKRLKKSLHKVQRQQEQDRHRQAVHTAVNQDSNNHMVVGSLIETLIFMGTASFQVIFVRKWFAGKGP--QNWA 258          
BLAST of mRNA_E-siliculosus-1a_F_contig109.618.1 vs. uniprot
Match: A0A8J2WN94_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2WN94_9STRA)

HSP 1 Score: 68.2 bits (165), Expect = 5.980e-10
Identity = 67/223 (30.04%), Postives = 106/223 (47.53%), Query Frame = 0
Query:   33 CFFRYVEEETKLQAKVFVFKGGN-LDIGFSVRGPSQLDDRGNIVHGRTKLKLRKSAKIT--SENILEDNDDS---AELFSGYDYKFDAEKGEYEICLSNDKS-YAQEAKHVMLDISEVVEDGATKKHAKDDTMALQDAGGSPKNKEDLAIITNEMDELSKVFEEIKSFQQLERMQLTQRNTAAEDNHASMVQSSVLETVVLLLVGIGQIIFVRKWFSGKGTLL 248
            C +  + E      +VFV  GG  +DI  +V GP ++D+    V G      + +A++T  S  + ED   S     L +  D       G Y ICL N  S Y ++   + +  SE   + A K H KD     +  GG  +N E++  +   +  L      +K  Q  ER +L +     +  H  MVQ+S++ET V +L  + Q++FVR+WF+GKG +L
Sbjct:   39 CIYEELPEGVGGTLEVFVLSGGGEMDIDVAVDGPLKIDE----VSGLPAKNGKPAARVTVKSGGVNEDRFASPTHVALAAPRDGP-----GAYSICLDNSGSRYTEKVVSLAVRTSEDKGNAAVK-HKKD-----KKKGG--RNSENVEKVEARVVALRGQLATLKDKQARERRRLAKHRALYDARHDGMVQASLMETCVYVLCSVFQLVFVRRWFAGKGGML 244          
BLAST of mRNA_E-siliculosus-1a_F_contig109.618.1 vs. uniprot
Match: A0A6U2ENY3_9STRA (Hypothetical protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A6U2ENY3_9STRA)

HSP 1 Score: 57.8 bits (138), Expect = 3.830e-6
Identity = 32/77 (41.56%), Postives = 48/77 (62.34%), Query Frame = 0
Query:  171 EDLAIITNEMDELSKVFEEIKSFQQLERMQLTQRNTAAEDNHASMVQSSVLETVVLLLVGIGQIIFVRKWFSGKGTL 247
            EDL +   ++ +L+++  EIK  QQ ER +L+      E +H+ MV SS+LETV+ +LV   Q+  +RKWFSG   L
Sbjct:  235 EDLQVTREQLKKLNRLLNEIKEKQQDERHRLSIHAATNEHSHSRMVLSSLLETVLFMLVTGFQVYTIRKWFSGSPML 311          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig109.618.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D7FKV3_ECTSI5.850e-16596.03GOLD domain-containing protein n=1 Tax=Ectocarpus ... [more]
F0Y4F3_AURAN4.740e-1227.68Uncharacterized protein n=1 Tax=Aureococcus anopha... [more]
A0A7S2C741_9STRA7.560e-1223.87Hypothetical protein n=2 Tax=Dictyocha speculum Ta... [more]
A0A8J2WN94_9STRA5.980e-1030.04Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A6U2ENY3_9STRA3.830e-641.56Hypothetical protein n=1 Tax=Pseudictyota dubia Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR009038GOLD domainSMARTSM01190EMP24_GP25L_2coord: 21..242
e-value: 2.5E-22
score: 90.2
IPR009038GOLD domainPFAMPF01105EMP24_GP25Lcoord: 22..241
e-value: 6.1E-22
score: 78.4
IPR009038GOLD domainPROSITEPS50866GOLDcoord: 31..142
score: 10.96
IPR015720TMP21-relatedPANTHERPTHR22811TRANSMEMBRANE EMP24 DOMAIN-CONTAINING PROTEINcoord: 8..67
coord: 110..245
NoneNo IPR availablePANTHERPTHR22811:SF59OPOSSUM, ISOFORM Acoord: 8..67
coord: 110..245
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 21..219
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..20
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 4..15
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 242..252
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 220..241
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 16..20
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..3
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..21
score: 0.918
NoneNo IPR availableTMHMMTMhelixcoord: 4..26
NoneNo IPR availableTMHMMTMhelixcoord: 218..237
IPR036598GOLD domain superfamilySUPERFAMILY101576Supernatant protein factor (SPF), C-terminal domaincoord: 31..132

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig109contigE-siliculosus-1a_F_contig109:49429..52181 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig109.618.1mRNA_E-siliculosus-1a_F_contig109.618.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig109 49017..52234 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig109.618.1 ID=prot_E-siliculosus-1a_F_contig109.618.1|Name=mRNA_E-siliculosus-1a_F_contig109.618.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=253bp
MNALSAHVLLFLLCCVSATAASTYLIEERAQVCFFRYVEEETKLQAKVFV
FKGGNLDIGFSVRGPSQLDDRGNIVHGRTKLKLRKSAKITSENILEDNDD
SAELFSGYDYKFDAEKGEYEICLSNDKSYAQEAKHVMLDISEVVEDGATK
KHAKDDTMALQDAGGSPKNKEDLAIITNEMDELSKVFEEIKSFQQLERMQ
LTQRNTAAEDNHASMVQSSVLETVVLLLVGIGQIIFVRKWFSGKGTLLKQ
WA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036598GOLD_dom_sf
IPR015720TMP21-related
IPR009038GOLD_dom