prot_E-siliculosus-1a_F_contig109.616.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig109.616.1
Unique Nameprot_E-siliculosus-1a_F_contig109.616.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length172
Homology
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BLAST of mRNA_E-siliculosus-1a_F_contig109.616.1 vs. uniprot
Match: D7FKV0_ECTSI (Ferredoxin n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FKV0_ECTSI)

HSP 1 Score: 333 bits (855), Expect = 1.170e-115
Identity = 166/171 (97.08%), Postives = 168/171 (98.25%), Query Frame = 0 
Query:    1 MRVARIAIGGVCMLDLTSGFVFPAPAVSTCTRARMSSSPLRAANEVKVTVEGVARTVALEEGVSILDGLEAHDIDAPHSCRSGLCTECAAMVTANLDNVKLEAAVLDPEISARGFVLTCSSTVAGPGVELELGVGDKMYEAQYGELVQGHNDAQEAKPGKWNLPFPDVSGA 171
            MRV RIAIGG+CMLDLTSGFVFPAPAVSTC RARMSSSPLRAAN+VKVTVEGV RTVALEEGVSILDGLEAHDIDAPHSCRSGLCTECAAMVTANLDNVKLEAAVLDPEISARGFVLTCSSTVAGPGVELELGVGDKMYEAQYGELVQGHNDAQEAKPGKWNLPFPDVSGA
Sbjct:    1 MRVVRIAIGGLCMLDLTSGFVFPAPAVSTCRRARMSSSPLRAANDVKVTVEGVVRTVALEEGVSILDGLEAHDIDAPHSCRSGLCTECAAMVTANLDNVKLEAAVLDPEISARGFVLTCSSTVAGPGVELELGVGDKMYEAQYGELVQGHNDAQEAKPGKWNLPFPDVSGA 171
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BLAST of mRNA_E-siliculosus-1a_F_contig109.616.1 vs. uniprot
Match: A0A6H5K0E4_9PHAE (2Fe-2S ferredoxin-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K0E4_9PHAE)

HSP 1 Score: 160 bits (406), Expect = 4.050e-48
Identity = 81/87 (93.10%), Postives = 83/87 (95.40%), Query Frame = 0 
Query:    1 MRVARIAIGGVCMLDLTSGFVFPAPAVSTCTRARMSSSPLRAANEVKVTVEGVARTVALEEGVSILDGLEAHDIDAPHSCRSGLCTE 87
            MRVA IAIGG+CMLDLTSGFVFPAPAVSTC RARMSSS LRAAN+VKVTVEGV RTVALEEGVSILDGLEAHDIDAPHSCRSGLCTE
Sbjct:    1 MRVAHIAIGGLCMLDLTSGFVFPAPAVSTCRRARMSSSRLRAANDVKVTVEGVVRTVALEEGVSILDGLEAHDIDAPHSCRSGLCTE 87
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BLAST of mRNA_E-siliculosus-1a_F_contig109.616.1 vs. uniprot
Match: A0A7S1NQA7_9EUGL (Hypothetical protein (Fragment) n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S1NQA7_9EUGL)

HSP 1 Score: 117 bits (292), Expect = 6.440e-31
Identity = 51/102 (50.00%), Postives = 74/102 (72.55%), Query Frame = 0 
Query:   55 RTVALEEGVSILDGLEAHDIDAPHSCRSGLCTECAAMVTANLDNVKLEAAVLDPEISARGFVLTCSSTVAGPGVELELGVGDKMYEAQYGELVQGHNDAQEA 156
            +T+ + +  ++LD +EA  IDAPHSCR+GLCTECA  VT+ LD++ L+A V        G+VLTC++ V GPGVE+ LG+GD+MY++Q+G+  +GH D Q A
Sbjct:    2 QTILVPKSETLLDAMEAAGIDAPHSCRTGLCTECAGRVTSGLDSIDLQACVTQDSTFNEGYVLTCAANVTGPGVEITLGMGDEMYDSQFGDFRKGHEDMQSA 103
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BLAST of mRNA_E-siliculosus-1a_F_contig109.616.1 vs. uniprot
Match: A0A4D9D796_9STRA (2Fe-2S ferredoxin-type domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D796_9STRA)

HSP 1 Score: 89.0 bits (219), Expect = 3.750e-19
Identity = 47/113 (41.59%), Postives = 68/113 (60.18%), Query Frame = 0 
Query:   45 EVKVTVEGVARTVALEEGVSILDGLEAHDIDAPHSCRSGLCTECAAMVTANLDNVKLEAAVLDPEISARGFVLTCSSTVAGPGVELELGVGDKMYEAQYGELVQGHNDAQEAK 157
            +VK+T +G  + + + E   IL+  E  + D P SCR+G+CT CA  V AN D+ K     L  E S  GFVLTC +   GPG+E+ELG+ D +YE+QYG+  +     Q++K
Sbjct:   56 DVKMTYKGETKVLTVSEDTCILEAAEK-EWDVPCSCRNGICTTCAGRVIANPDSKKEAIHGLSAEQSKNGFVLTCQTHPCGPGLEVELGMYDTVYESQYGQYEKKATTEQKSK 167
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BLAST of mRNA_E-siliculosus-1a_F_contig109.616.1 vs. uniprot
Match: A0A7S2XX00_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XX00_9STRA)

HSP 1 Score: 82.4 bits (202), Expect = 5.790e-17
Identity = 43/113 (38.05%), Postives = 65/113 (57.52%), Query Frame = 0 
Query:   45 EVKVTVEGVARTVALEEGVSILDGLEAHDIDAPHSCRSGLCTECAAMVTANLDNVKLEAAVLDPEISARGFVLTCSSTVAGPGVELELGVGDKMYEAQYGELVQGHNDAQEAK 157
            +V +T  G  + + + E  +IL+  E    D P SCR+G+CT CAAMVT   +++ L    L  E   +G+ L C S   GPG+++ELG  D++YE QYG+  +  N  +E K
Sbjct:   24 DVSITFNGETKVITVPEDQNILEASEELFGDVPCSCRNGICTTCAAMVTGGEESLTLAVHGLSAEQREKGYTLCCQSYATGPGLKVELGKYDEVYEDQYGKYER--NQQEEKK 134
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BLAST of mRNA_E-siliculosus-1a_F_contig109.616.1 vs. uniprot
Match: G8S8B7_ACTS5 (Phenylacetic acid degradation NADH oxidoreductase n=4 Tax=Actinoplanes TaxID=1865 RepID=G8S8B7_ACTS5)

HSP 1 Score: 65.1 bits (157), Expect = 2.840e-9
Identity = 34/88 (38.64%), Postives = 54/88 (61.36%), Query Frame = 0 
Query:   44 NEVKVTVEGVARTVALEEGVSILDGLEAHDIDAPHSCRSGLCTECAAMVTANLDNVKLEAAVLDPEISARGFVLTCSSTVAGPGVELE 131
            +E+ V ++G A TV +E+GV++LDG++    D P +C+ G+C  C A V      ++   A+ D E++A GFVLTC ST   P V ++
Sbjct:  259 SEITVHLDGRATTVTVEQGVTLLDGVQRARPDLPFACKGGVCGTCRARVIEGDVAMRRNFALEDAELAA-GFVLTCQSTATSPKVVVD 345
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BLAST of mRNA_E-siliculosus-1a_F_contig109.616.1 vs. uniprot
Match: A0A7W7GZH5_9ACTN (Ring-1,2-phenylacetyl-CoA epoxidase subunit PaaE n=3 Tax=Actinoplanes TaxID=1865 RepID=A0A7W7GZH5_9ACTN)

HSP 1 Score: 65.1 bits (157), Expect = 2.840e-9
Identity = 36/88 (40.91%), Postives = 52/88 (59.09%), Query Frame = 0 
Query:   44 NEVKVTVEGVARTVALEEGVSILDGLEAHDIDAPHSCRSGLCTECAAMVTANLDNVKLEAAVLDPEISARGFVLTCSSTVAGPGVELE 131
            +EV V ++G A TV +EEGV++LDG++    D P +C+ G+C  C A V      ++   A L+P   A GFVLTC ST A   V ++
Sbjct:  259 SEVTVHLDGRATTVTVEEGVTLLDGVQRSRPDLPFACKGGVCGTCRARVVEGEVTMRRNFA-LEPAELAAGFVLTCQSTAASAKVVVD 345
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BLAST of mRNA_E-siliculosus-1a_F_contig109.616.1 vs. uniprot
Match: A0A7C3ZYD2_9RHOB (Ferredoxin--NADP reductase n=1 Tax=Aliiroseovarius sp. TaxID=1872442 RepID=A0A7C3ZYD2_9RHOB)

HSP 1 Score: 65.1 bits (157), Expect = 2.890e-9
Identity = 33/86 (38.37%), Postives = 51/86 (59.30%), Query Frame = 0 
Query:   45 EVKVTVEGVARTVALEEGVSILDGLEAHDIDAPHSCRSGLCTECAAMVTANLDNVKLEAAVLDPEISARGFVLTCSSTVAGPGVEL 130
            E  +T++G +R V +  G ++L+   A D+DAP SCR+G+C+ C A VTA    ++   A+ D E+  +GFVLTC        +EL
Sbjct:  266 EAVITLDGASRKVKVAPGQTLLEAALAADLDAPFSCRAGVCSSCKAKVTAGKGEMRANHALEDYEVE-QGFVLTCQCVPTTDKIEL 350
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BLAST of mRNA_E-siliculosus-1a_F_contig109.616.1 vs. uniprot
Match: A0A840WSK7_9RHOB (Ring-1,2-phenylacetyl-CoA epoxidase subunit PaaE n=1 Tax=Rubricella aquisinus TaxID=2028108 RepID=A0A840WSK7_9RHOB)

HSP 1 Score: 64.3 bits (155), Expect = 5.320e-9
Identity = 34/99 (34.34%), Postives = 55/99 (55.56%), Query Frame = 0 
Query:   32 RARMSSSPLRAANEVKVTVEGVARTVALEEGVSILDGLEAHDIDAPHSCRSGLCTECAAMVTANLDNVKLEAAVLDPEISARGFVLTCSSTVAGPGVEL 130
            R   S++  +   +  +T++G AR + +  G ++LD   A D+DAP SCR+G+C+ C A VT     +    A+ D E+ A+G+VLTC      P + L
Sbjct:  249 RPAASATIAQTGAQATITLDGAAREITIAPGDTVLDAALAADLDAPFSCRAGVCSTCRARVTEGETEMIANHALEDYEV-AQGYVLTCQCLPRSPVIRL 346
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BLAST of mRNA_E-siliculosus-1a_F_contig109.616.1 vs. uniprot
Match: UPI0019423BAB (phenylacetate-CoA oxygenase/reductase subunit PaaK n=1 Tax=Actinoplanes siamensis TaxID=1223317 RepID=UPI0019423BAB)

HSP 1 Score: 63.9 bits (154), Expect = 7.160e-9
Identity = 34/88 (38.64%), Postives = 52/88 (59.09%), Query Frame = 0 
Query:   44 NEVKVTVEGVARTVALEEGVSILDGLEAHDIDAPHSCRSGLCTECAAMVTANLDNVKLEAAVLDPEISARGFVLTCSSTVAGPGVELE 131
            +EV V ++G   TV +EEG ++LDG++    D P +C+ G+C  C A V      ++   A+   E++A GFVLTC ST A P V ++
Sbjct:  256 SEVTVHLDGRTTTVTVEEGTTLLDGVQRSRPDLPFACKGGVCGTCRARVIEGDVTMRRNFALEQAELAA-GFVLTCQSTAASPKVVVD 342
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig109.616.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FKV0_ECTSI1.170e-11597.08Ferredoxin n=1 Tax=Ectocarpus siliculosus TaxID=28... [more]
A0A6H5K0E4_9PHAE4.050e-4893.102Fe-2S ferredoxin-type domain-containing protein n... [more]
A0A7S1NQA7_9EUGL6.440e-3150.00Hypothetical protein (Fragment) n=1 Tax=Eutreptiel... [more]
A0A4D9D796_9STRA3.750e-1941.592Fe-2S ferredoxin-type domain-containing protein n... [more]
A0A7S2XX00_9STRA5.790e-1738.05Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
G8S8B7_ACTS52.840e-938.64Phenylacetic acid degradation NADH oxidoreductase ... [more]
A0A7W7GZH5_9ACTN2.840e-940.91Ring-1,2-phenylacetyl-CoA epoxidase subunit PaaE n... [more]
A0A7C3ZYD2_9RHOB2.890e-938.37Ferredoxin--NADP reductase n=1 Tax=Aliiroseovarius... [more]
A0A840WSK7_9RHOB5.320e-934.34Ring-1,2-phenylacetyl-CoA epoxidase subunit PaaE n... [more]
UPI0019423BAB7.160e-938.64phenylacetate-CoA oxygenase/reductase subunit PaaK... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR012675Beta-grasp domain superfamilyGENE3D3.10.20.30coord: 26..138
e-value: 9.6E-17
score: 62.7
IPR0010412Fe-2S ferredoxin-type iron-sulfur binding domainPFAMPF00111Fer2coord: 48..123
e-value: 5.7E-9
score: 35.8
IPR0010412Fe-2S ferredoxin-type iron-sulfur binding domainPROSITEPS510852FE2S_FER_2coord: 44..136
score: 10.616
NoneNo IPR availablePANTHERPTHR43112FAMILY NOT NAMEDcoord: 42..122
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 15..23
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 24..171
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..23
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..5
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 6..14
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..19
score: 0.576
IPR0360102Fe-2S ferredoxin-like superfamilySUPERFAMILY542922Fe-2S ferredoxin-likecoord: 44..132

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig109contigE-siliculosus-1a_F_contig109:35332..39002 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig109.616.1mRNA_E-siliculosus-1a_F_contig109.616.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig109 35284..39618 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig109.616.1 ID=prot_E-siliculosus-1a_F_contig109.616.1|Name=mRNA_E-siliculosus-1a_F_contig109.616.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=172bp
MRVARIAIGGVCMLDLTSGFVFPAPAVSTCTRARMSSSPLRAANEVKVTV
EGVARTVALEEGVSILDGLEAHDIDAPHSCRSGLCTECAAMVTANLDNVK
LEAAVLDPEISARGFVLTCSSTVAGPGVELELGVGDKMYEAQYGELVQGH
NDAQEAKPGKWNLPFPDVSGA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR0360102Fe-2S_ferredoxin-like_sf
IPR0010412Fe-2S_ferredoxin-type
IPR012675Beta-grasp_dom_sf