prot_E-siliculosus-1a_F_contig10889.603.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig10889.603.1
Unique Nameprot_E-siliculosus-1a_F_contig10889.603.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length149
Homology
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BLAST of mRNA_E-siliculosus-1a_F_contig10889.603.1 vs. uniprot
Match: A0A6H5J8H8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J8H8_9PHAE)

HSP 1 Score: 137 bits (345), Expect = 1.110e-34
Identity = 90/130 (69.23%), Postives = 93/130 (71.54%), Query Frame = 0 
Query:    1 GGSATAEWDALGTGSGGFGRPLQQRQQPPPRHGVGGGINPYLARRPSACPASASGKDSSDAAPSGXXXXXXTKTEDVQVGVETSRESSSTAAAAADKAWELWPDDGLMPPLPPRKESLWVSRPSPRRFAG 130
            GGSA AEWDAL TGSG                           RRPSAC ASASG  SSDAA SGXXXXXX +TEDVQVGVETSRESSSTAAAA DK WELWPDDGLMPPLPPRK+SLWVS+PSPRR AG
Sbjct:  925 GGSAPAEWDALRTGSG---------------------------RRPSACLASASGMGSSDAALSGXXXXXXXRTEDVQVGVETSRESSSTAAAA-DKTWELWPDDGLMPPLPPRKKSLWVSKPSPRRCAG 1026
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BLAST of mRNA_E-siliculosus-1a_F_contig10889.603.1 vs. uniprot
Match: D8LRB4_ECTSI (Cell surface protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRB4_ECTSI)

HSP 1 Score: 128 bits (322), Expect = 1.310e-31
Identity = 78/92 (84.78%), Postives = 81/92 (88.04%), Query Frame = 0 
Query:   40 PYLARRPSACPASASG-KDSSDAAPSGXXXXXXTKTEDVQVGVETSRESSSTAAAAADKAWELWPDDGLMPPLPPRKESLWVSRPSPRRFAG 130
            P  ARRPSACPASASG KDSSD+AP  XXXXXX +TEDVQVGVE SRESSST AAA DKAWELWPDD LMPPLPPRK+SLWVSRPSPRR AG
Sbjct:  455 PQQARRPSACPASASGTKDSSDSAPXXXXXXXXMRTEDVQVGVERSRESSSTVAAA-DKAWELWPDDRLMPPLPPRKKSLWVSRPSPRRCAG 545
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig10889.603.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5J8H8_9PHAE1.110e-3469.23Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LRB4_ECTSI1.310e-3184.78Cell surface protein n=1 Tax=Ectocarpus siliculosu... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig10889contigE-siliculosus-1a_F_contig10889:1288..2134 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig10889.603.1mRNA_E-siliculosus-1a_F_contig10889.603.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig10889 1287..2134 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig10889.603.1 ID=prot_E-siliculosus-1a_F_contig10889.603.1|Name=mRNA_E-siliculosus-1a_F_contig10889.603.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=149bp
GGSATAEWDALGTGSGGFGRPLQQRQQPPPRHGVGGGINPYLARRPSACP
ASASGKDSSDAAPSGGGGGGGTKTEDVQVGVETSRESSSTAAAAADKAWE
LWPDDGLMPPLPPRKESLWVSRPSPRRFAGGGGGGGGGDDSFSSLVIVK
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