mRNA_E-siliculosus-1a_F_contig1087.595.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-siliculosus-1a_F_contig1087.595.1
Unique NamemRNA_E-siliculosus-1a_F_contig1087.595.1
TypemRNA
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1087.595.1 vs. uniprot
Match: A0A6H5JC51_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JC51_9PHAE)

HSP 1 Score: 680 bits (1755), Expect = 3.300e-243
Identity = 374/381 (98.16%), Postives = 376/381 (98.69%), Query Frame = 1
Query:  244 MAIDKTFFGPGEMDGGDGGSSQGLLSPDALLELLSFLPHPEAQRTLQAPLSKVYLSSFTREENIWKARCVEQWKVPPHTTCHAWRTLHIDLVHCLSLVDGTAEETCGGGGDYDNVVAIVQVLDAYRTLAEMTRACFDRLGHLLNSEEAREAVKCVDWRIMDHALWALKTYPDDVDLLLKILRFLVLAGRPAGRMEGAVMSLPPASDGPLRAFGPSGDGVEAVLACMERHRSNAAVQAVACWSLVNLALIPGQKRSLCRQGGVLXXXXXXXXXXXXXXXXXXXXXXXXXLVTPDVTSEKIIQPDTMKAVVAIVVSAIQAFSNMVTIVNRACLVLHNIALDPGHLGALVAIGAPEELLHAIGKHPTDALLIQCATGTLRRLGR 1386
            MAIDKTF GPGEMDGGDGGSSQGLLSPDALLELLSFLPHPEAQRTLQAPLSKVYLSSFT EENIWKARCVEQWKVPP+TTCHAWRTLHIDLVHCLSLVDGTAEETCGGG DY NVVAIVQVLDAYRTLAEMTRACFDRLGHLLNSEEAREAVKCVDWRIMDHALWALKTYPDDVDLLLKILRFLVLAGRPAGRMEGAVMS PPASDGPLRAFGPSG+GVEAVLACMERHRSNAAVQAVACWSLVNLALIPGQKRSLCRQGGVLXXXXXXXXXXXXXXXXXXXXXXXXXLVTPDVTSEKIIQPDTMKAVVAIVVSAIQAFSNMVTIVNRACLVLHNIALDPGHLGALVAIGAPEELLHAIGKHPTDALLIQCATGTLRRLGR
Sbjct:    1 MAIDKTFVGPGEMDGGDGGSSQGLLSPDALLELLSFLPHPEAQRTLQAPLSKVYLSSFTLEENIWKARCVEQWKVPPNTTCHAWRTLHIDLVHCLSLVDGTAEETCGGG-DYGNVVAIVQVLDAYRTLAEMTRACFDRLGHLLNSEEAREAVKCVDWRIMDHALWALKTYPDDVDLLLKILRFLVLAGRPAGRMEGAVMSRPPASDGPLRAFGPSGNGVEAVLACMERHRSNAAVQAVACWSLVNLALIPGQKRSLCRQGGVLXXXXXXXXXXXXXXXXXXXXXXXXXLVTPDVTSEKIIQPDTMKAVVAIVVSAIQAFSNMVTIVNRACLVLHNIALDPGHLGALVAIGAPEELLHAIGKHPTDALLIQCATGTLRRLGR 380          
BLAST of mRNA_E-siliculosus-1a_F_contig1087.595.1 vs. uniprot
Match: F0Y6I8_AURAN (Expressed protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y6I8_AURAN)

HSP 1 Score: 120 bits (301), Expect = 1.060e-25
Identity = 131/364 (35.99%), Postives = 183/364 (50.27%), Query Frame = 1
Query:  316 LSPDALLELLSFLPHPEAQRTLQAPLSKVYLSSFTREENIWKARCVEQ-WKVPPHT----TCHAWRTLHIDLVHCLSLVDGTAEETCGGGGDYDNVVAIVQVLDAYRTLAEMTRACFDRLGHLLNSEEAREAVKCVDWRIMDHALWALKTYPDDVDLLLKILRFLVLAGRPAGRMEGAVMSLPPASDGPLRAFGPSGDGVEAVLACMERHRSNAAVQAVACWSLVNLALIPGQKRSLCRQGGVLXXXXXXXXXXXXXXXXXXXXXXXXXLVTPDVTS---EKIIQPDTMKAVVAIVVSAIQAFSNMVTIVNRACLVLHNIALDPGHLGALVAIGAPEELLHAIGKHPTDALLIQCATGTLRRLG 1383
            L+PD ++ +L FL  PE       P+ + +         +W   C E  W V   T    +    R LH  ++   S   G + +             + +++ A+  +A + R C + L   L+ E AR+A   ++ R+    + AL  +    +L +  L  +V   RP G  EG V     AS G L AF     G+ AVLA M  H S  +VQA+ CWSLVNLAL   QK  L +  G+  XXXXXXXXXXXXXXXXXXXXXXXXLV P+  +   + +      K VV  V+ A+ AF +   +V   CLVLHN++LD G++  L+A G    L  A  +H  DA + + A  TLRRLG
Sbjct:   93 LTPDMVIVVLGFLDAPERHAAASPPICRQHRDRVRENREVWIQLCAEAPWHVARPTLEGRSVPELRRLHRSVLDASSRARGASVDD------------VSRIMRAHEDVAGVQRRCLETLAERLHCERARKAA--LEARVTAQVVAALWAFLPAAELQVVALHCVVFLARPIGGAEGMVFHRGMASQG-LDAFLGKRGGIAAVLASMRAHGSVDSVQAMGCWSLVNLALNHQQKLELLKLRGLDRXXXXXXXXXXXXXXXXXXXXXXXXLVIPEAGALYEDDLDLKAANKRVVRYVLGAMAAFPDSEKLVRCGCLVLHNLSLDDGNVPHLLAAGVSLPLQRA-ARHHKDADVQRSAVSTLRRLG 440          
BLAST of mRNA_E-siliculosus-1a_F_contig1087.595.1 vs. uniprot
Match: A0A7S3ZUP6_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZUP6_9STRA)

HSP 1 Score: 104 bits (259), Expect = 3.280e-20
Identity = 105/368 (28.53%), Postives = 153/368 (41.58%), Query Frame = 1
Query:  316 LSPDALLELLSFLPHPEAQRTLQAPLSKVYLSSFTREENIWKARCVEQ-WKVP----PHTTCHAWRTLHIDLVHCLSLVDGTAEETCGGGGDYDNVVAIVQVLDAYRTLAEMTRACFDRLGHLLNSEEAREAVKCVDWRIMDHALWALKTYPDDVDLLLKILRFLVLAGRPAGRMEGAVMSLPPASDGPLRAFGPSGDGVEAVLACMERHRSNAAVQAVACWSLVNLALIPGQKRSLCRQGGVLXXXXXXXXXXXXXXXXXXXXXXXXXLVTPDVTSEKIIQPDTMKA--------VVAIVVSAIQAFSNMVTIVNRACLVLHNIALDPGHLGALVAIGAPEELLHAIGKHPTDALLIQCATGTLRRL 1380
            L+PD +L +L +L      R    P  +      T+   +W   C    W++      H   +A R LH  +V     VD TA            +  I +++  +  +A +   CF  L   L+ E  R+    +D  +    + AL  + +  D+ +  L  +V   RP G  EG V     AS G L AF     G+ AVL  M  H  N+ VQA+ CWSLVNLAL   QK +L    G+                          LV P+  S   +  +TM          VV  V++A++ F     +V   CLVLHN++LD  ++  L+A G    L  A   H  DA + + A  TLRRL
Sbjct:  103 LTPDLMLYVLGYLDPKARHRAAANPACRQLRDRVTKNREVWAHLCSSTPWRIHRSDLEHRPVNALRRLHRTVVEATDSVD-TAP-----------IADIARIMSDHARVAGVQVRCFRTLADRLHCETFRK--NALDCGVASSVVRALWKFDECDDVQVVALHCVVFLARPIGGAEGMVYHRGMASRG-LDAFLGESGGIAAVLRSMRVHLKNSNVQAMGCWSLVNLALNHQQKLALLALDGLDAVLAAMAHHPSTLEVQFRALFALINLVIPEAGS---VSTNTMDCGENAAHARVVRGVLAAMRHFPESEKLVRCGCLVLHNLSLDDKNVPHLLAFGVARPLQRAARSHK-DADVQRSAVSTLRRL 451          
BLAST of mRNA_E-siliculosus-1a_F_contig1087.595.1 vs. uniprot
Match: A0A7S3JW95_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JW95_9STRA)

HSP 1 Score: 102 bits (253), Expect = 1.960e-19
Identity = 95/379 (25.07%), Postives = 158/379 (41.69%), Query Frame = 1
Query:  316 LSPDALLELLSFLPHPEAQRTLQAPLSKVYLSSFTREENIWKARCVEQ-WKVP-------PHTTCHAWRTLHIDLVHCLSLVDGTAEETCGGGGDYDNVVAIVQVLDAYRTLAEMTRACFDRLGHLLNSEEAREAVKCVDWRIMDHALWALKTYPDDVDLLLKILRFLVLAGRPAGRMEGAVMSLPPASDGPLRAFGPSGDGVEAVLACMERHRSNAAVQAVACWSLVNLALIPGQKRSLCRQGGVLXXXXXXXXXXXXXXXXXXXXXXXXXLVTPDVTSEKIIQPDTMKA---------------VVAIVVSAIQAFSNMVTIVNRACLVLHNIALDPGHLGALVAIGAPEELLHAIGKHPTDALLIQCATGTLRRLG 1383
            L+P+ ++ +L +LP  E               +     NIW   C  + W++         ++T   +R LH +L+H + +            GD   V  +  ++  ++ +  +   C +RL   L+ E  R+  + +D ++    ++ L+ Y  + +L    L  +V   RP G  EG V      S+G L AF     G++ VL  M+ H S++ VQAV CWSLVNLAL   QK  +  + G+                          LV P+   ++  Q D                   ++  V+ A+  F +   ++   CLVLHN++L P ++  L A    + LL A   H  D  + + A  TLRRLG
Sbjct:  112 LAPELVVHILEYLPVNERXXXXXXXXXXXXAHNVRENINIWFPLCTAKPWQMSWSDLEERGYSTASEFRELHTNLIHAIDIARR---------GD---VAQVANIMKEFQDVIGLQYECLERLIIALHCERVRK--RAIDAKLASCVIYILQRYSHNTELQSMALHCIVFLARPIGGAEGMVFCRGVHSNG-LEAF--LYGGIDIVLDAMKNHISSSVVQAVGCWSLVNLALNRQQKIDILTKNGIQCIIRAMQIHPHCLDVQFRALFALINLVIPENVQQQFNQNDPHNTNTNNTFLPQDTISHDILDHVLIAMDRFGDSDKLIRCGCLVLHNLSLRPTNIPILQANNTSKPLLRAARTH-NDHDVQRSAISTLRRLG 472          
BLAST of mRNA_E-siliculosus-1a_F_contig1087.595.1 vs. uniprot
Match: A0A7S3LG40_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3LG40_9STRA)

HSP 1 Score: 97.4 bits (241), Expect = 1.890e-17
Identity = 81/286 (28.32%), Postives = 128/286 (44.76%), Query Frame = 1
Query:  586 VVAIVQVLDAYRTLAEMTRACFDRLGHLLNSEEAREAVKCVDWRIMDHALWALKTYPDDVDLLLKILRFLVLAGRPAGRMEGAVMSLPPASDGPLRAFGPSG-----DGVEAVLACMERHRSNAAVQAVACWSLVNLALIPGQKRSLCRQGGVLXXXXXXXXXXXXXXXXXXXXXXXXXLVTPDV-------TSEKIIQPDT--------MKAVVAIVVSAIQAFSNMVTIVNRACLVLHNIALDPGHLGALVAIGAPEELLH-AIGKHPTDALLIQCATGTLRRL 1380
            + +IV  +  + ++  +   C   L  LL  E+ R   +     + D  L  +  +P  V L       +VL  RP G  EG +      +   + + G +G      G+  +L  M R  S A +QA++CWSLVN+AL P QK  L + GG+                          LV P V       T +  I+ +         ++ +V +VV A++ + +   I+NRACLVLHN++L PG+   L+ I    ++L   +  + TD +L Q ATGTL RL
Sbjct:  854 IYSIVNWMVGFSSVEGIQTMCLKVLPFLLEDEQQRMTAQRAG--LTDVVLRGMVMFPKSVPLHTAAFHTIVLLARPLGGREGMLFHSSMVNASGIFSGGNAGGTNGKSGIAVMLDSMRRFESEAVLQAMSCWSLVNIALAPAQKEVLVKLGGIQATAGAMLAHPENAEVQFRALFALINLVIPSVAMTNNVDTQDTAIEDEQGNDMLDELVEQIVGLVVRAMKNYCSSKAILNRACLVLHNLSLTPGYHQHLLLIPHCYQMLEWCLANYRTDQVLQQSATGTLHRL 1137          
BLAST of mRNA_E-siliculosus-1a_F_contig1087.595.1 vs. uniprot
Match: A0A1Z5JKA1_FISSO (Uncharacterized protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JKA1_FISSO)

HSP 1 Score: 95.9 bits (237), Expect = 5.430e-17
Identity = 79/280 (28.21%), Postives = 126/280 (45.00%), Query Frame = 1
Query:  592 AIVQVLDAYRTLAEMTRACFDRLGHLLNSEEAREAVKCVDWRIMDHALWALKTYPDDVDLLLKILRFLVLAGRPAGRMEGAVMSLPPASDGPLRAFGPSGD-----GVEAVLACMERHRSNAAVQAVACWSLVNLALIPGQKRSLCRQGGVLXXXXXXXXXXXXXXXXXXXXXXXXXLVTPDV-----------TSEKIIQPDTMKAVVAIVVSAIQAFSNMVTIVNRACLVLHNIALDPGHLGALVAIGAPEELLH-AIGKHPTDALLIQCATGTLRRL 1380
            +IV  + A+  +  +   C   L  ++ +E  R A +     + ++ L A+  +PD   L       +VL  RP G  EG +      +   +   G   D     G+  +L  ++R   +  +QA++CWSLVN+AL P QK+ L + GG+                          LV P V            SEK +    +  VV +VV+A++ F +   I+NRACLVLHNI+L   + GAL+      ++L   +  + +D +L Q A GTL RL
Sbjct:  686 SIVNWMTAFSDVEGIQTMCLKVLPPIMENEHQRSAAQRAG--LTNNVLRAMVRFPDSAPLHTAAFHAIVLLARPLGGREGMLFHSSMVNASSIFDSGTPTDQGGKSGIAVMLDSIKRFEYDGVLQAMSCWSLVNIALAPAQKQMLVKLGGIQATANAMMIHPYDAEVQFRALFALINLVIPSVRSADQEEVGSDVSEKEMLDAVVGRVVGLVVAAMKNFCSSEAILNRACLVLHNISLSQSYHGALLWTPNCYQMLEWCLSNYKSDQVLQQSAAGTLHRL 963          
BLAST of mRNA_E-siliculosus-1a_F_contig1087.595.1 vs. uniprot
Match: B7FR68_PHATC (Predicted protein n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7FR68_PHATC)

HSP 1 Score: 93.6 bits (231), Expect = 2.990e-16
Identity = 80/281 (28.47%), Postives = 126/281 (44.84%), Query Frame = 1
Query:  586 VVAIVQVLDAYRTLAEMTRACFDRLGHLLNSEEAREAVKCVDWRIMDHALWALKTYPDDVDLLLKILRFLVLAGRPAGRMEGAVMSLPPA-SDGPLRAFGPSG----DGVEAVLACMERHRSNAAVQAVACWSLVNLALIPGQKRSLCRQGGVLXXXXXXXXXXXXXXXXXXXXXXXXXLVTP----------DVTSEKIIQPDTMKAVVAIVVSAIQAFSNMVTIVNRACLVLHNIALDPGHLGALVAIGAPEELLH-AIGKHPTDALLIQCATGTLRRL 1380
            + +IV  + A+  +  +   C   L  LL  E+ R   +     + D  L A+ T+PD   L       +VL  RP G  EG +       S G   A   +      G+  +L  M+R + +  +QA++CWSLVN+AL P QK  L   GG+                          LV P          +V +EK +  +++  ++ +V+ A++ F     IVNRACLVLHN++L   +   L+      ++L   +  +PTD +L Q A+GTL RL
Sbjct:  726 IFSIVNWMLAFSDVEGIQTMCLRDLPSLLEDEQQRITAQRAG--LTDVVLRAMVTFPDSSPLHTAAFHTIVLLARPLGGREGMLFHTSMVNSSGIFSASSVASRNGKSGIAVMLDSMKRFQQDEVLQAMSCWSLVNIALAPAQKEVLVNLGGIEVTSRAMCAHPHSAEVQFRALFALINLVIPSRDQGEPLRGEVITEKEMLDESVDQIIHLVLLAMKNFCASEAIVNRACLVLHNVSLTREYHETLLCCPNCYQMLEWCLANYPTDQVLQQSASGTLHRL 1004          
BLAST of mRNA_E-siliculosus-1a_F_contig1087.595.1 vs. uniprot
Match: A0A6T9YI25_9STRA (Hypothetical protein n=1 Tax=Asterionellopsis glacialis TaxID=33640 RepID=A0A6T9YI25_9STRA)

HSP 1 Score: 90.9 bits (224), Expect = 1.610e-15
Identity = 83/305 (27.21%), Postives = 127/305 (41.64%), Query Frame = 1
Query:  562 GGGGDYDNV--------VAIVQVLDAYRTLAEMTRACFDRLGHLLNSEEAREAVKCVDWRIMDHALWALKTYPDDVDLLLKILRFLVLAGRPAGRMEGAVMSLPPASDGPLRAFGPSG--DGVEAVLACMERHRSNAAVQAVACWSLVNLALIPGQKRSLCRQGGVLXXXXXXXXXXXXXXXXXXXXXXXXXLVTPDVT---------------------SEKIIQPDTMKAVVAIVVSAIQAFSNMVTIVNRACLVLHNIALDPGHLGALVAIGAPEELLH-AIGKHPTDALLIQCATGTLRRL 1380
            GGG +  NV         +IV  + A+  +  +   C   L  LL  E  R   +     +    L  +  +PD V L       +VL  RP G  EG +      +   +   G  G  +G+  +L  M R  S   +QA++CWSLVN+AL P QK  L + GG+                          LV P V                      +E+ +  + +  +  +VV A++ F +  TI+NRACLVLHN++L   +   L+      ++L   +  +P+D +L QCA GTL RL
Sbjct:  339 GGGQELANVDLPWSCAIYSIVNWMVAFSDVEGIQTMCLRVLPFLLEDETQRTTAQRAG--LTGIVLRGMVLFPDSVQLHTAAFHTIVLLARPLGGREGMLFHSSMVNSSGIFINGHQGGKNGIAVMLDSMRRFASEEPLQAMSCWSLVNVALAPSQKAVLVKLGGISATANAMMQHPYSAEVQFRALFALINLVIPSVNLSEETSEQRSMQEQLGEVNDATEREMLDENVGQIANLVVLAMKNFCSSQTILNRACLVLHNLSLTQEYHETLLWTPNCYQMLEWCLANYPSDQVLQQCAAGTLHRL 641          
BLAST of mRNA_E-siliculosus-1a_F_contig1087.595.1 vs. uniprot
Match: B8BQG5_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BQG5_THAPS)

HSP 1 Score: 88.2 bits (217), Expect = 1.760e-14
Identity = 84/308 (27.27%), Postives = 131/308 (42.53%), Query Frame = 1
Query:  565 GGGDYDNV--------VAIVQVLDAYRTLAEMTRACFDRLGHLLNSEEAREAVKCVDWRIMDHALWALKTYPDDVDLLLKILRFLVLAGRPAGRMEGAVMSLPPASDGPLRAFGPSG--DGVEAVLACMERHRSNAAVQAVACWSLVNLALIPGQKRSLCRQGGVLXXXXXXXXXXXXXXXXXXXXXXXXXLVTPDV-------------------------TSEKIIQPDTMKAVVAIVVSAIQAFSNMVTIVNRACLVLHNIALDPGHLGALVAIGAPEELLH-AIGKHPTDALLIQCATGTLRRL 1380
            G G+ DNV         ++V  + A+  +  +   C   L +LL  E  R   +     + D  L A+  +PD ++L       LVL  RP G  EG +      +   +   G S   +G+  +L  M R   +  +QA++CWSLVN+AL P QK  L + GG+                          LV P                           TSEK +   ++  +  +VV A++ F +   I+NRACLVLHN++L+  +   L+      ++L   IG +P D +L Q A GT++RL
Sbjct: 1234 GAGEVDNVNLPWSCAIYSVVNWMVAFADVEGIQIMCLKVLPYLLEDESQRTTAQRAG--LTDSVLRAMVLFPDSIELHTVAFHTLVLLARPLGGNEGMLFHTAMVNTRGIFNEGSSSSKNGIVIMLDSMRRFAQDEILQAMSCWSLVNVALTPLQKTMLVKLGGLTVTANAMLQHPYNAEVQFRALFALINLVIPSEVRPEESEEMREIEREIFQQLGEVGDTSEKEMLDASVGQISNLVVVAMKNFCSSEAILNRACLVLHNLSLNEDYHSILLWTPNCYQMLEWCIGNYPHDHVLQQSAGGTIQRL 1539          
BLAST of mRNA_E-siliculosus-1a_F_contig1087.595.1 vs. uniprot
Match: A0A7S2MKG5_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2MKG5_9STRA)

HSP 1 Score: 83.2 bits (204), Expect = 8.720e-14
Identity = 77/269 (28.62%), Postives = 114/269 (42.38%), Query Frame = 1
Query:  646 CFDRLGHLLNSEEAREAVKCVDWRIMDHALWALKTYPDDVDLLLKILRFLVLAGRPAGRMEGAVM-SLPPASDGPLRAFGPSG-DGVEAVLACMERHRSNAAVQAVACWSLVNLALIPGQKRSLCRQGGVLXXXXXXXXXXXXXXXXXXXXXXXXXLVTPDV---------------------TSEKIIQPDTMKAVVAIVVSAIQAFSNMVTIVNRACLVLHNIALDPG-HLGALVAIGAPEELLHAIGKHPTDALLIQCATGTLRRL 1380
            C   L  LL  E  R   +     + D  L  +  +PD V+L       LVL  RP G  EG +  S    + G       +G +G+  +L  M R   +  +QA++CWS+VN+ALIP QK  L + GG+                          LV P                       T+E+ +  + +  +  +VV A++ F +   I+NRACLVLHN++L+   H   L      + L   IG +  D +L Q A GTL+RL
Sbjct:    7 CLKVLPFLLEDENQRTTAQRAG--LTDIVLRGMVLFPDSVELHTAAFHTLVLLARPLGGKEGMLFHSAMVNASGIFNVGSNTGKNGIAVMLDSMRRFSHDEVLQAMSCWSMVNIALIPSQKTMLVKLGGISVAANAMMQHPYNAEVQFRALFALINLVIPSENLSEGSAEAMAVQEQLGEVSQTTEQEMLDENVGQIANLVVVAMKNFCSSEAILNRACLVLHNLSLNEDYHTTLLWTPNCYQMLEWCIGNYRHDRVLQQSAGGTLQRL 273          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1087.595.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 20
Match NameE-valueIdentityDescription
A0A6H5JC51_9PHAE3.300e-24398.16Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
F0Y6I8_AURAN1.060e-2535.99Expressed protein n=1 Tax=Aureococcus anophageffer... [more]
A0A7S3ZUP6_9STRA3.280e-2028.53Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A7S3JW95_9STRA1.960e-1925.07Hypothetical protein n=1 Tax=Aureoumbra lagunensis... [more]
A0A7S3LG40_9STRA1.890e-1728.32Hypothetical protein n=1 Tax=Amphora coffeiformis ... [more]
A0A1Z5JKA1_FISSO5.430e-1728.21Uncharacterized protein n=2 Tax=Fistulifera solari... [more]
B7FR68_PHATC2.990e-1628.47Predicted protein n=1 Tax=Phaeodactylum tricornutu... [more]
A0A6T9YI25_9STRA1.610e-1527.21Hypothetical protein n=1 Tax=Asterionellopsis glac... [more]
B8BQG5_THAPS1.760e-1427.27Uncharacterized protein n=1 Tax=Thalassiosira pseu... [more]
A0A7S2MKG5_9STRA8.720e-1428.62Hypothetical protein n=1 Tax=Helicotheca tamesis T... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig1087contigE-siliculosus-1a_F_contig1087:30911..34690 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-19
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Properties
Property NameValue
Start1
Stop1
Cds size1146
Model size1616
Exons6
Ec32 orthologEc-12_007670.1
Ec32 ortholog descriptionArmadillo-like helical
Hectar predicted targeting categoryother localisation
Best eggNOG OGNA|NA|NA
Best tax levelEukaryota
EggNOG OGs2C8IF@1,2S3J3@2759
Seed eggNOG ortholog2880.D7FLC7
Seed ortholog evalue8.9e-188
Seed ortholog score662.9
Taxonomic scopeEukaryota
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig1087.595.1prot_E-siliculosus-1a_F_contig1087.595.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalepolypeptideE-siliculosus-1a_F_contig1087 31138..34036 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927587.011761-UTR-E-siliculosus-1a_F_contig1087:30910..311371622927587.011761-UTR-E-siliculosus-1a_F_contig1087:30910..31137Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig1087 30911..31137 -
1696318599.1112177-UTR-E-siliculosus-1a_F_contig1087:30910..311371696318599.1112177-UTR-E-siliculosus-1a_F_contig1087:30910..31137Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig1087 30911..31137 -
1622927587.086074-UTR-E-siliculosus-1a_F_contig1087:34036..341481622927587.086074-UTR-E-siliculosus-1a_F_contig1087:34036..34148Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig1087 34037..34148 -
1696318599.16667-UTR-E-siliculosus-1a_F_contig1087:34036..341481696318599.16667-UTR-E-siliculosus-1a_F_contig1087:34036..34148Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig1087 34037..34148 -
1622927587.0969076-UTR-E-siliculosus-1a_F_contig1087:34559..346901622927587.0969076-UTR-E-siliculosus-1a_F_contig1087:34559..34690Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig1087 34560..34690 -
1696318599.1762488-UTR-E-siliculosus-1a_F_contig1087:34559..346901696318599.1762488-UTR-E-siliculosus-1a_F_contig1087:34559..34690Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig1087 34560..34690 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927587.0249116-CDS-E-siliculosus-1a_F_contig1087:31137..313651622927587.0249116-CDS-E-siliculosus-1a_F_contig1087:31137..31365Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1087 31138..31365 -
1696318599.1202915-CDS-E-siliculosus-1a_F_contig1087:31137..313651696318599.1202915-CDS-E-siliculosus-1a_F_contig1087:31137..31365Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1087 31138..31365 -
1622927587.039589-CDS-E-siliculosus-1a_F_contig1087:31635..320191622927587.039589-CDS-E-siliculosus-1a_F_contig1087:31635..32019Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1087 31636..32019 -
1696318599.127807-CDS-E-siliculosus-1a_F_contig1087:31635..320191696318599.127807-CDS-E-siliculosus-1a_F_contig1087:31635..32019Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1087 31636..32019 -
1622927587.0496664-CDS-E-siliculosus-1a_F_contig1087:32243..325911622927587.0496664-CDS-E-siliculosus-1a_F_contig1087:32243..32591Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1087 32244..32591 -
1696318599.1368241-CDS-E-siliculosus-1a_F_contig1087:32243..325911696318599.1368241-CDS-E-siliculosus-1a_F_contig1087:32243..32591Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1087 32244..32591 -
1622927587.059945-CDS-E-siliculosus-1a_F_contig1087:33684..337471622927587.059945-CDS-E-siliculosus-1a_F_contig1087:33684..33747Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1087 33685..33747 -
1696318599.1468506-CDS-E-siliculosus-1a_F_contig1087:33684..337471696318599.1468506-CDS-E-siliculosus-1a_F_contig1087:33684..33747Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1087 33685..33747 -
1622927587.07248-CDS-E-siliculosus-1a_F_contig1087:33913..340361622927587.07248-CDS-E-siliculosus-1a_F_contig1087:33913..34036Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1087 33914..34036 -
1696318599.1567056-CDS-E-siliculosus-1a_F_contig1087:33913..340361696318599.1567056-CDS-E-siliculosus-1a_F_contig1087:33913..34036Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1087 33914..34036 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-siliculosus-1a_F_contig1087.595.1

>prot_E-siliculosus-1a_F_contig1087.595.1 ID=prot_E-siliculosus-1a_F_contig1087.595.1|Name=mRNA_E-siliculosus-1a_F_contig1087.595.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=382bp
MAIDKTFFGPGEMDGGDGGSSQGLLSPDALLELLSFLPHPEAQRTLQAPL
SKVYLSSFTREENIWKARCVEQWKVPPHTTCHAWRTLHIDLVHCLSLVDG
TAEETCGGGGDYDNVVAIVQVLDAYRTLAEMTRACFDRLGHLLNSEEARE
AVKCVDWRIMDHALWALKTYPDDVDLLLKILRFLVLAGRPAGRMEGAVMS
LPPASDGPLRAFGPSGDGVEAVLACMERHRSNAAVQAVACWSLVNLALIP
GQKRSLCRQGGVLAIVRAMARHPQDSEVHFRAMFALINLVTPDVTSEKII
QPDTMKAVVAIVVSAIQAFSNMVTIVNRACLVLHNIALDPGHLGALVAIG
APEELLHAIGKHPTDALLIQCATGTLRRLGR*
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mRNA from alignment at E-siliculosus-1a_F_contig1087:30911..34690-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-siliculosus-1a_F_contig1087.595.1 ID=mRNA_E-siliculosus-1a_F_contig1087.595.1|Name=mRNA_E-siliculosus-1a_F_contig1087.595.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=3780bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1087:30911..34690- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
CTTCAACTCACCTCTGACCTTGCCCCTCTCCCCCTGGACCCTCTACTGCC CTTCACCTCTCTTGGCCTGGTACCCCCGCCTCCCCTTCATCCGACCGCCA AGCCTAGCTGCCGGATCCCGCACAATTCGCGGTGAGGGGAGATGTGTTCT CGCGGATCTTTTCCGTTTGTTTGTTGGAATATGCCCCGAGCACGAGACAT GAACGGAGCCTGCATGTTCCATCTAGGATGCACTTTGCACACATACGCCC CCTCTATCATGAGCTCGTGACACAGAGAACGGGGGTTCGGTTGTCTTCCC AACCTCCCGTTCCCCCACCTGTTTAGCATCTCCTTGAGTTCGGTCGCGAG AATCATACATAGGTTGGTTCATCGAATGGCCGGCGTATGTAGCCCGATAG CAGCAAGCAAATAGTCCCGCATTTTGCCACCAGCTCTCACCCTTTCCTAC CTTCTGTCTTTGCTCTCCCCCCTCCCCCCGTTCTCCTCCCTTCTCCACTC TCTTTTCCCCCTTGCATGGTGCGGCGATCTCGGTGCAAGCAGTGATCGAG ACGCGAAGAGAGAAAGCCAATTTCCCGTGGATATCCGAAGGGGTGCCTTG CTCCTTCCTCTTGTCTCTTTCAGTCTCTAACAGCATCATCATTACTTGCC AAAGATGGCGATTGACAAGACTTTCTTTGGGCCCGGTGAAATGGACGGGG GAGACGGCGGCTCGTCCCAAGGGCTGCTGTCTCCCGACGCTCTACTAGAA CTTCTTTCCTTCTTGCCGCACCCAGAGGTAAGTCGGCCTGCACGCACGGG GGGCGTTGCATGCTCTTGAAGTTTGCCTCATCGACGTGGCGGCACAGGGG ACGATCACAAAGCTGCGCGCGCAATGTATTCATACGTGCCACCACGATGA CAGAATGTTGCACCCCTGCCCGGCCTGCGCGGATACCCTGCAGGCTCAAA GGACCCTGCAGGCGCCGCTCTCGAAGGTGTACCTCTCTTCTTTCACCCGT GAGGAGGTGAGGCTTCGTTGTGGACGACTGCTGCAGAACAACTGTCACCC CTAGATATGAGCATACAGAAATCAGAACAACTGTCACCCCTAGATACGAG CATACAGAAATCTTAATCTTGCCCTTCCCTTGAGATCTACCATATCTGCA TGTGTGTTGTGAATTTGGTTCTTGAACTTGCAAGCGTCGGCCCTAAAAAC ACGACACAGATGGCGCTTCTTGAGCATGGAGTATCGTGTTGAAAGAGACA TATCCTCACCTCGACCAAAGTTTCTCTTGTGGAGAAGTTGAAGGGCGAGT AATCCGCGCTCGGACGACCCGGTCCTAAACCGGATTTGTATGTACGCCCA GCAGACTTGGACCAACGCGGACCAAGATTAGTCCAGGTCCAGAACTGTCG GTTTGATTGGGTGCACGACCGACATTTTTTTGTCAATTCCCTCGTGATAT TCTCGCAGGAAGGGGGGAAAACAAGCCCGCTTTTTCCCACACGTGCATCG GAACTACCGCCGCGGATCTATGCATGCATGCACATGATTTTCCCCACTCT TCCCGCGTGCATACGTACCCCCACATTGGCACACACAAAAGACTGCTGTG TGATGCAAACGAGAGAGAGAGAACATGTGAAAGGGCACGACGAATAAATG AATAGGACGTGTGTTTTTTTTTTTTCGCAAGTAGTGTTTTGGGGGGTTTT GGCAACAAGAGTGCACGGGGACATGTCGCCTTCCAACTCTTGTGTCCTTC GCCCACACCATCGTTTGGAGCCTTTCCCCGTTCGGTTGATCCGCAAGGTC CGAGATACACACACTTCAGTACTAGACTACTATTCTCACCCGCATATTAT CCTAGCTTAATTTCAACCACCAGCTAGCTGTAACCCTGCGCTAACCGTCA GTGATATCGTACTGTACCACAATCGCGCGTTGCATGTGATGCTATGCATA CACGCAGAACATCTGGAAGATTCTCGTTCGTATTCTGTGTTATCCCTAAC TACATAACCAACCACAGCTAGCTGTAGGTCCTGCGCTATCAGCAGTGGTA TCCACCACCCCCGCCCTTCGCACGTGATGCCATGCATACACGCACGCAGA ACATCTGGAAGGCGAGGTGCGTGGAGCAGTGGAAGGTGCCCCCCCACACC ACCTGCCACGCCTGGCGCACCCTCCACATCGACCTGGTGCACTGTCTATC TCTTGTTGACGGCACCGCGGAGGAGACTTGCGGCGGCGGCGGCGACTACG ACAACGTGGTCGCGATCGTGCAGGTGCTGGACGCCTACCGTACCCTAGCC GAGATGACCCGCGCTTGCTTCGACAGGCTCGGCCACCTCCTGAATAGCGA AGAGGCCCGCGAGGCCGTCAAGTGCGTAGACTGGCGCATCATGGACCACG CTCTCTGGGCGCTCAAGACATACCCCGACGACGTGGACTTGCTTCTGGTG AGTTCCGTCGAATATAATCGAACCGTGCATACACCTCGTCCCCGTAGTGG GCAGCAATGACCTGGCGCGTGTGGAGACGAGTCAGCAAAACGGTGTTGCG AGCACGTGATTGACACGCGGGTCGCGTACCCATTTCCTCGAACGAAACCA CCAAACATACTTCACGCCTCTCCTAAAAAAAACACTTCCAATTCCCCTGC GGTCGCTGCTCTTTTCGGCAGAAAATTCTCCGCTTCCTCGTCCTGGCCGG GCGCCCCGCGGGGCGTATGGAGGGGGCGGTGATGTCCCTCCCCCCCGCCT CCGACGGCCCCCTGCGGGCCTTCGGCCCCTCGGGGGATGGCGTGGAGGCC GTCCTGGCGTGCATGGAGAGGCACCGGTCTAACGCCGCGGTCCAGGCCGT GGCCTGCTGGTCGTTGGTCAACCTGGCGCTGATCCCCGGGCAAAAGAGGT CACTGTGCCGCCAGGGCGGGGTCCTCGCTATCGTGAGGGCGATGGCCCGG CACCCCCAGGACAGCGAGGTTCACTTCAGGGCCATGTTCGCTCTCATCAA CCTGGTGACGCCGGACGTGACCTCGGAGAAGATCATCCAGCCGGACACCA TGAAGGTGAGAGAGCACCAGAAGGCGTCCATCCCGGTATCACCAAAAAAA CGCCTCCCGAACGGGGGTGCCGAGGGGCCGGGAACGGCGTGACGGCCCCG TGTTTTTGCCAAACAGTAGGGTAGGGTAGGTTACTCTACAGGTTTACAGG TTACGCCTTTTTTTTTTTCACGTTGATCGCGTCGGAAGGAGGGCGCCGCG ATGCTGACGGCCGCGTTGTTCGCGCTCGTGTGTTGTTTTGGCCCGCTTTT TCCTGCACCGCCGTCCGTCCCTCAGGCCGTAGTCGCCATCGTGGTATCGG CGATCCAAGCCTTCTCGAACATGGTGACCATCGTCAACCGGGCCTGCCTC GTGCTTCACAACATCGCCCTCGACCCTGGCCACCTTGGCGCTCTCGTGGC CATCGGTGCTCCCGAGGAGCTCCTCCACGCTATCGGCAAGCACCCCACGG ACGCCCTGCTGATCCAGTGCGCCACGGGCACTCTGCGCCGGCTCGGGCGC TGAAGGCAGCAGCGGAAACGAACGAACGGCCGACCGTGTGTGCCGCAGCA GCAGCGGTATCTTATCAGCGAGCGCGCGTGTGTGCGATGCGATCTCCGCG GTGAAGAATTCCCGAGGAAGTATATATTAAACTATCTGGTTTTTCACGCG CCTATGCTAGGTTGTCGCAACATACCTGCGCTGACTCTTGGAAAGGATAA GGAGCGGCTTGGCTGTACGTAAAATTGGGA
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Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig1087:30911..34690-

>mRNA_E-siliculosus-1a_F_contig1087.595.1 ID=mRNA_E-siliculosus-1a_F_contig1087.595.1|Name=mRNA_E-siliculosus-1a_F_contig1087.595.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=2292bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1087:30911..34690- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
ATGGCGATTGACAAGACTTTCTTTGGGCCCGGTGAAATGGACGGGGGAGA
CGGCGGCTCGTCCCAAGGGCTGCTGTCTCCCGACGCTCTACTAGAACTTC
TTTCCTTCTTGCCGCACCCAGAGATGGCGATTGACAAGACTTTCTTTGGG
CCCGGTGAAATGGACGGGGGAGACGGCGGCTCGTCCCAAGGGCTGCTGTC
TCCCGACGCTCTACTAGAACTTCTTTCCTTCTTGCCGCACCCAGAGGCTC
AAAGGACCCTGCAGGCGCCGCTCTCGAAGGTGTACCTCTCTTCTTTCACC
CGTGAGGAGGCTCAAAGGACCCTGCAGGCGCCGCTCTCGAAGGTGTACCT
CTCTTCTTTCACCCGTGAGGAGAACATCTGGAAGGCGAGGTGCGTGGAGC
AGTGGAAGGTGCCCCCCCACACCACCTGCCACGCCTGGCGCACCCTCCAC
ATCGACCTGGTGCACTGTCTATCTCTTGTTGACGGCACCGCGGAGGAGAC
TTGCGGCGGCGGCGGCGACTACGACAACGTGGTCGCGATCGTGCAGGTGC
TGGACGCCTACCGTACCCTAGCCGAGATGACCCGCGCTTGCTTCGACAGG
CTCGGCCACCTCCTGAATAGCGAAGAGGCCCGCGAGGCCGTCAAGTGCGT
AGACTGGCGCATCATGGACCACGCTCTCTGGGCGCTCAAGACATACCCCG
ACGACGTGGACTTGCTTCTGAACATCTGGAAGGCGAGGTGCGTGGAGCAG
TGGAAGGTGCCCCCCCACACCACCTGCCACGCCTGGCGCACCCTCCACAT
CGACCTGGTGCACTGTCTATCTCTTGTTGACGGCACCGCGGAGGAGACTT
GCGGCGGCGGCGGCGACTACGACAACGTGGTCGCGATCGTGCAGGTGCTG
GACGCCTACCGTACCCTAGCCGAGATGACCCGCGCTTGCTTCGACAGGCT
CGGCCACCTCCTGAATAGCGAAGAGGCCCGCGAGGCCGTCAAGTGCGTAG
ACTGGCGCATCATGGACCACGCTCTCTGGGCGCTCAAGACATACCCCGAC
GACGTGGACTTGCTTCTGAAAATTCTCCGCTTCCTCGTCCTGGCCGGGCG
CCCCGCGGGGCGTATGGAGGGGGCGGTGATGTCCCTCCCCCCCGCCTCCG
ACGGCCCCCTGCGGGCCTTCGGCCCCTCGGGGGATGGCGTGGAGGCCGTC
CTGGCGTGCATGGAGAGGCACCGGTCTAACGCCGCGGTCCAGGCCGTGGC
CTGCTGGTCGTTGGTCAACCTGGCGCTGATCCCCGGGCAAAAGAGGTCAC
TGTGCCGCCAGGGCGGGGTCCTCGCTATCGTGAGGGCGATGGCCCGGCAC
CCCCAGGACAGCGAGGTTCACTTCAGGGCCATGTTCGCTCTCATCAACCT
GGTGACGCCGGACGTGACCTCGGAGAAGATCATCCAGCCGGACACCATGA
AGAAAATTCTCCGCTTCCTCGTCCTGGCCGGGCGCCCCGCGGGGCGTATG
GAGGGGGCGGTGATGTCCCTCCCCCCCGCCTCCGACGGCCCCCTGCGGGC
CTTCGGCCCCTCGGGGGATGGCGTGGAGGCCGTCCTGGCGTGCATGGAGA
GGCACCGGTCTAACGCCGCGGTCCAGGCCGTGGCCTGCTGGTCGTTGGTC
AACCTGGCGCTGATCCCCGGGCAAAAGAGGTCACTGTGCCGCCAGGGCGG
GGTCCTCGCTATCGTGAGGGCGATGGCCCGGCACCCCCAGGACAGCGAGG
TTCACTTCAGGGCCATGTTCGCTCTCATCAACCTGGTGACGCCGGACGTG
ACCTCGGAGAAGATCATCCAGCCGGACACCATGAAGGCCGTAGTCGCCAT
CGTGGTATCGGCGATCCAAGCCTTCTCGAACATGGTGACCATCGTCAACC
GGGCCTGCCTCGTGCTTCACAACATCGCCCTCGACCCTGGCCACCTTGGC
GCTCTCGTGGCCATCGGTGCTCCCGAGGAGCTCCTCCACGCTATCGGCAA
GCACCCCACGGACGCCCTGCTGATCCAGTGCGCCACGGGCACTCTGCGCC
GGCTCGGGCGCTGAGCCGTAGTCGCCATCGTGGTATCGGCGATCCAAGCC
TTCTCGAACATGGTGACCATCGTCAACCGGGCCTGCCTCGTGCTTCACAA
CATCGCCCTCGACCCTGGCCACCTTGGCGCTCTCGTGGCCATCGGTGCTC
CCGAGGAGCTCCTCCACGCTATCGGCAAGCACCCCACGGACGCCCTGCTG
ATCCAGTGCGCCACGGGCACTCTGCGCCGGCTCGGGCGCTGA
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