prot_E-siliculosus-1a_F_contig1087.594.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig1087.594.1
Unique Nameprot_E-siliculosus-1a_F_contig1087.594.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length361
Homology
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BLAST of mRNA_E-siliculosus-1a_F_contig1087.594.1 vs. uniprot
Match: A0A6H5JEE7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEE7_9PHAE)

HSP 1 Score: 522 bits (1344), Expect = 9.110e-172
Identity = 295/357 (82.63%), Postives = 301/357 (84.31%), Query Frame = 0 
Query:    1 GGGSGKSVVADKSGDSIVSDEGPPGIPSLPAANHGETSGKPCDVSRTAAAAAVAAGAVAATKAYGIREKLEEEEDTGGGADPALSPRGAPPPAPFGGMLSGFGCMAPQLSPGKGAARLSPRAGSRLPEIDDXXXXXXXXXXXXXXXXEEVAGRRAPGSCSPLSRPPLNSGPDDGRGERVGQGXXXXXXXXXXXXXXXXXXXTMTPELKPIAEMADSGSFTDSEAGSDVSSCLSSMSGRSGYRVPRDPAALLAAAMEKAGQVAAIPPPSSGSHGRPLSSVQEVPMEGVPLPGLATPEFDDECGLKVHCSTWDSGSTTASTVSPLRAAVSTVEVDTTVVPIPSPAQRPESSDESGEATE 357
            GG S KSVVAD+SGDS+VSD  PPG+PSLPAANHGETSGKP  VSRTAAAAAVAAGAVAATKAYGIREK +EEEDTGGGADPALSPRGAPP APFGGMLSGFGCMAPQLSPGKG ARLSPRAGSRLPEIDD                 EVAG+RAPGSCSP SRPPLNSG  DGR ERVGQG                   TMTP+LKPIAEMADSGSFTDSEAGSDVSSCLSSMSGRSGYRVPRDPAALLAAAMEKAGQVAAIPPPSSGSHGRPLSSVQEVPMEGVPLPGLATPE DDECGLKVH S WDSGSTT STVSPLRAAVS V VDTTVVPIPSPAQRPESSDESGE TE
Sbjct:  557 GGSSDKSVVADRSGDSVVSDGRPPGMPSLPAANHGETSGKPYGVSRTAAAAAVAAGAVAATKAYGIREKFDEEEDTGGGADPALSPRGAPPSAPFGGMLSGFGCMAPQLSPGKGGARLSPRAGSRLPEIDDDDSSLAEEEEMEENG--EVAGKRAPGSCSPFSRPPLNSGTGDGRSERVGQGGGSASAVSLEKALALSRSCTMTPDLKPIAEMADSGSFTDSEAGSDVSSCLSSMSGRSGYRVPRDPAALLAAAMEKAGQVAAIPPPSSGSHGRPLSSVQEVPMEGVPLPGLATPESDDECGLKVH-SPWDSGSTTTSTVSPLRAAVSKVGVDTTVVPIPSPAQRPESSDESGEVTE 910
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BLAST of mRNA_E-siliculosus-1a_F_contig1087.594.1 vs. uniprot
Match: D7FLC6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLC6_ECTSI)

HSP 1 Score: 453 bits (1166), Expect = 3.070e-142
Identity = 268/308 (87.01%), Postives = 272/308 (88.31%), Query Frame = 0 
Query:    1 GGGSGKSVVADKSGDSIVSDEGPPGIPSLPAANHGETSGKPCDVSRTAAAAAVAAGAVAATKAYGIREKLEEEEDTGGGADPALSPRGAPPPAPFGGMLSGFGCMAPQLSPGKGAARLSPRAGSRLPEIDDXXXXXXXXXXXXXXXXEEVAGRRAPGSCSPLSRPPLNSGPDDGRGERVGQGXXXXXXXXXXXXXXXXXXXTMTPELKPIAEMADSGSFTDSEAGSDVSSCLSSMSGRSGYRVPRDPAALLAAAMEKAGQVAAIPPPSSGSHGRPLSSVQEVPMEGVPLPGLATPEFDDECGLKVHCS 308
            GG S KSVVADKSGDS+VSDEGPPG+PSLPAANHGETSGKP DVSRTAAAAAVAAGAVAA KAY IREK + EEDTG GAD ALSPRGAPPPAPFGGMLSGFGCMAPQLSPGKGAARLSPRAGSRLPEIDDXXXXXXXXXXXXXXX EEVAGRRAPGSCSPLSRP LNSGPDDGRGERVGQG                   TMTPELKPIAEMADSGSFTDSEAGSDVSSCLSSMSGRSGYRVPRDPAALLAAAMEKAGQVAAIPPPSSGSHGR LSSVQEVPMEGVPLPGLATPE DDEC LK   +
Sbjct: 1327 GGDSDKSVVADKSGDSVVSDEGPPGMPSLPAANHGETSGKPYDVSRTAAAAAVAAGAVAAAKAYDIREKPDGEEDTGEGADLALSPRGAPPPAPFGGMLSGFGCMAPQLSPGKGAARLSPRAGSRLPEIDDXXXXXXXXXXXXXXX-EEVAGRRAPGSCSPLSRPQLNSGPDDGRGERVGQGEASASAVSLEKALDLSRSRTMTPELKPIAEMADSGSFTDSEAGSDVSSCLSSMSGRSGYRVPRDPAALLAAAMEKAGQVAAIPPPSSGSHGRSLSSVQEVPMEGVPLPGLATPEIDDECDLKASAA 1633
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1087.594.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JEE7_9PHAE9.110e-17282.63Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FLC6_ECTSI3.070e-14287.01Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig1087contigE-siliculosus-1a_F_contig1087:23602..24684 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig1087.594.1mRNA_E-siliculosus-1a_F_contig1087.594.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig1087 23602..24686 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig1087.594.1 ID=prot_E-siliculosus-1a_F_contig1087.594.1|Name=mRNA_E-siliculosus-1a_F_contig1087.594.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=361bp
GGGSGKSVVADKSGDSIVSDEGPPGIPSLPAANHGETSGKPCDVSRTAAA
AAVAAGAVAATKAYGIREKLEEEEDTGGGADPALSPRGAPPPAPFGGMLS
GFGCMAPQLSPGKGAARLSPRAGSRLPEIDDDDDESSLAEEEEMEENEEV
AGRRAPGSCSPLSRPPLNSGPDDGRGERVGQGEGSASAVSLETALALSRS
RTMTPELKPIAEMADSGSFTDSEAGSDVSSCLSSMSGRSGYRVPRDPAAL
LAAAMEKAGQVAAIPPPSSGSHGRPLSSVQEVPMEGVPLPGLATPEFDDE
CGLKVHCSTWDSGSTTASTVSPLRAAVSTVEVDTTVVPIPSPAQRPESSD
ESGEATEEEEE
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