prot_E-siliculosus-1a_F_contig1085.589.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig1085.589.1
Unique Nameprot_E-siliculosus-1a_F_contig1085.589.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length238
Homology
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BLAST of mRNA_E-siliculosus-1a_F_contig1085.589.1 vs. uniprot
Match: A0A6H5KV56_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KV56_9PHAE)

HSP 1 Score: 54.3 bits (129), Expect = 7.730e-5
Identity = 94/111 (84.68%), Postives = 94/111 (84.68%), Query Frame = 0 
Query:    6 RAKVEGLAQAQVVSASPVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKGEARHDERQAHAGLPTGVKEGGDVG 116
            RAKVEGLAQ QVVSASPV             XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKGEARHDERQAH  LP GVKEGGDVG
Sbjct:  989 RAKVEGLAQGQVVSASPVTAEPLAQQASVPVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKGEARHDERQAHVALPIGVKEGGDVG 1099
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1085.589.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5KV56_9PHAE7.730e-584.68Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig1085contigE-siliculosus-1a_F_contig1085:14610..15857 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig1085.589.1mRNA_E-siliculosus-1a_F_contig1085.589.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig1085 14610..15858 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig1085.589.1 ID=prot_E-siliculosus-1a_F_contig1085.589.1|Name=mRNA_E-siliculosus-1a_F_contig1085.589.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=238bp
QQQQQRAKVEGLAQAQVVSASPVTAEPLAQQASVPVCPSPTAGTSDAAID
NGGVSTGRVGSVSGGPKAGTSGKGGNGRSRASGSRSRGGRKGEARHDERQ
AHAGLPTGVKEGGDVGGGGSRGGLVATPPPAQQQQPQAQELTKKGGRGQQ
QRRQREQHQQHQQHQQHQQQQPQPPPKGRSSAKPQQPSSTTTATATTTIP
AKAKKKAPALVVETPVSGAWADEIPSPTPQRQRQQQQQ
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