mRNA_E-siliculosus-1a_F_contig10844.585.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-siliculosus-1a_F_contig10844.585.1
Unique NamemRNA_E-siliculosus-1a_F_contig10844.585.1
TypemRNA
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig10844.585.1 vs. uniprot
Match: A0A6H5KXS7_9PHAE (NB-ARC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXS7_9PHAE)

HSP 1 Score: 365 bits (938), Expect = 1.950e-119
Identity = 191/218 (87.61%), Postives = 199/218 (91.28%), Query Frame = -3
Query:    1 HAEAVKTALEELRPSSLPDMAAVPAGALELPRSSYVERAAVQEVADGLTAPEDRRAPYTVVGMGGGGKSVLASAVVRKPSVREHFRGGIFWVRLGRGAKNSLLALLQGLAREMGATPTDVPHMTPHVLDSLEQVKQHLAAVASTGTSPRLVVLDDVWEREVVDAFVPLGFKVLLTTRDRSVVGVPAGRLDLGDMTEEEALELLRKTSGTVGQPGDDVR 654
            H ++   AL  L P SLPDMAAVPAGALELP SSYVERAAVQEVADGLT+PED RAPYTVVGMGGGGKSVLASAVVRKPSVREHFRGGIFWVR+GRGAK+SLLALLQGLAREMGA  TD PH  PHVLD LEQVKQHLAAVASTGT PRLVVLDDVWEREVVDAFVPLGFKVLLTTRDRSVV VPAGRL++GDMTEEEALELLRK+SG VGQPGDDVR
Sbjct:  186 HHQSFLAALPSLLPPSLPDMAAVPAGALELPCSSYVERAAVQEVADGLTSPEDPRAPYTVVGMGGGGKSVLASAVVRKPSVREHFRGGIFWVRVGRGAKSSLLALLQGLAREMGAARTDAPHTVPHVLDGLEQVKQHLAAVASTGTFPRLVVLDDVWEREVVDAFVPLGFKVLLTTRDRSVVVVPAGRLEVGDMTEEEALELLRKSSGAVGQPGDDVR 403          
BLAST of mRNA_E-siliculosus-1a_F_contig10844.585.1 vs. uniprot
Match: D7G722_ECTSI (NB-ARC and TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G722_ECTSI)

HSP 1 Score: 366 bits (939), Expect = 2.100e-114
Identity = 189/218 (86.70%), Postives = 199/218 (91.28%), Query Frame = -3
Query:    1 HAEAVKTALEELRPSSLPDMAAVPAGALELPRSSYVERAAVQEVADGLTAPEDRRAPYTVVGMGGGGKSVLASAVVRKPSVREHFRGGIFWVRLGRGAKNSLLALLQGLAREMGATPTDVPHMTPHVLDSLEQVKQHLAAVASTGTSPRLVVLDDVWEREVVDAFVPLGFKVLLTTRDRSVVGVPAGRLDLGDMTEEEALELLRKTSGTVGQPGDDVR 654
            H ++   AL  L P SLPDMAAVP GALELP SSYVERAAVQEVADGLT PE+ RAPYTVVGMGGGGKSVLASA VRKPSVREHFRGGIFWVR+GRGAK+SLLALLQGLA ++GA PTD PH  PHVLD LEQV+QHLAAVASTGTSPRLVVLDDVWEREVVDAFVPLGFKVLLTTRDRSVVG+PAGRL+LGDMTEEEALELLRKTSGTVGQPGDDVR
Sbjct:  240 HHQSFLAALPSLLPPSLPDMAAVPTGALELPSSSYVERAAVQEVADGLTTPEESRAPYTVVGMGGGGKSVLASAAVRKPSVREHFRGGIFWVRVGRGAKSSLLALLQGLAWDVGAAPTDAPHGVPHVLDRLEQVQQHLAAVASTGTSPRLVVLDDVWEREVVDAFVPLGFKVLLTTRDRSVVGLPAGRLELGDMTEEEALELLRKTSGTVGQPGDDVR 457          
BLAST of mRNA_E-siliculosus-1a_F_contig10844.585.1 vs. uniprot
Match: D7G720_ECTSI (NB-ARC and TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G720_ECTSI)

HSP 1 Score: 362 bits (928), Expect = 9.570e-112
Identity = 189/218 (86.70%), Postives = 199/218 (91.28%), Query Frame = -3
Query:    1 HAEAVKTALEELRPSSLPDMAAVPAGALELPRSSYVERAAVQEVADGLTAPEDRRAPYTVVGMGGGGKSVLASAVVRKPSVREHFRGGIFWVRLGRGAKNSLLALLQGLAREMGATPTDVPHMTPHVLDSLEQVKQHLAAVASTGTSPRLVVLDDVWEREVVDAFVPLGFKVLLTTRDRSVVGVPAGRLDLGDMTEEEALELLRKTSGTVGQPGDDVR 654
            H ++   AL  L P SLPDMAAVPAGALELP SSYVERAAVQEVADGLTAPE+ RAPYTVVGMGGGGKSVLASAVVRKPSVREHFRGGIFWVR+GRGAK+SLLALLQGLAR++GA PTD P   P VLDSLEQV+QHLAAV STGTS RLVVLDDVWEREVVDAFVPLGFKVLLTTRDRSVVGVPAGRL+LGD+TEEEALELLRKTSG VGQPGDDVR
Sbjct:  223 HHQSFLAALPSLLPPSLPDMAAVPAGALELPSSSYVERAAVQEVADGLTAPEESRAPYTVVGMGGGGKSVLASAVVRKPSVREHFRGGIFWVRVGRGAKSSLLALLQGLARDVGAAPTDAPCGVPRVLDSLEQVRQHLAAVTSTGTSQRLVVLDDVWEREVVDAFVPLGFKVLLTTRDRSVVGVPAGRLELGDVTEEEALELLRKTSGAVGQPGDDVR 440          
BLAST of mRNA_E-siliculosus-1a_F_contig10844.585.1 vs. uniprot
Match: D7FUD7_ECTSI (NB-ARC and TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUD7_ECTSI)

HSP 1 Score: 342 bits (877), Expect = 4.590e-105
Identity = 187/245 (76.33%), Postives = 199/245 (81.22%), Query Frame = -3
Query:    1 KSIGEALDAIDRDVVRQFTAIAAKSAIHAEAVKTALEELRPSSLPDMAAVPAGALELPRSSYVERAAVQEVADGLTAPEDRRAPYTVVGMGGGGKSVLASAVVRKPSVREHFRGGIFWVRLGRGAKNSLLALLQGLAREMGATPTDVPHMTPHVLDSLEQVKQHLAAVASTGTSPRLVVLDDVWEREVVDAFVPLGFKVLLTTRDRSVVGVPAGRLDLGDMTEEEALELLRKTSGTVGQPGDDVR 735
            K + + L  I  DV R   AIAAK             ++ P SLPDMA VP GALELP SSYVERAAVQEVADGLT PE+ R PYTVVG+GGGGKSVLASAVVR PSVREHFRGGI WVR+GRGAKNSLL LLQGLARE+GA PTD PH  PH LDSLEQV+QHLAAVAST  SPRLVVLDDVWEREVVDAFVPLGFK+LLTTRDRS+V  PAGRL+LGDMTEEEALELLRKTSGTV  PGDDVR
Sbjct:    7 KKLEKKLQEIGGDVCRVVDAIAAKRIF---------TDILPPSLPDMAEVPVGALELPHSSYVERAAVQEVADGLTNPEEPRTPYTVVGIGGGGKSVLASAVVRMPSVREHFRGGISWVRVGRGAKNSLLPLLQGLAREVGAAPTDAPHGVPHALDSLEQVQQHLAAVASTRNSPRLVVLDDVWEREVVDAFVPLGFKLLLTTRDRSIVCDPAGRLELGDMTEEEALELLRKTSGTV-DPGDDVR 241          
BLAST of mRNA_E-siliculosus-1a_F_contig10844.585.1 vs. uniprot
Match: D8LGG5_ECTSI (NB-ARC and TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGG5_ECTSI)

HSP 1 Score: 341 bits (875), Expect = 3.680e-104
Identity = 185/212 (87.26%), Postives = 190/212 (89.62%), Query Frame = -3
Query:    1 ALEELRPSSLPDMAAVPAGALELPRSSYVERAAVQEVADGLTAPEDRRAPYTVVGMGGGGKSVLASAVVRKPSVREHFRGGIFWVRLGRGAKNSLLALLQGLAREMGATPTDVPHMTPHVLDSLEQVKQHLAAV-ASTGTSPRLVVLDDVWEREVVDAFVPLGFKVLLTTRDRSVVGVPAGRLDLGDMTEEEALELLRKTSGTVGQPGDDVR 633
            AL  LRP  L DMAAVPAGAL+LPR  YVERAAVQEVADGLTAPE+ RAPYTVVG+GGGGKSVLASAVVRKPSVREHFRGGI WVR+GRGAKNSLL LLQGLAREMG  PTD PH  P VLDSLEQV+QHLAAV ASTGTSPRLVVLDDVWEREVVDA VPLGFKVLLTTRD SVV VPA RLDLGDMTEEEALELLRKTSGTVGQPGD VR
Sbjct:  205 ALPSLRPPRLLDMAAVPAGALDLPRG-YVERAAVQEVADGLTAPEEPRAPYTVVGLGGGGKSVLASAVVRKPSVREHFRGGISWVRVGRGAKNSLLPLLQGLAREMGVAPTDAPHAVPQVLDSLEQVQQHLAAVVASTGTSPRLVVLDDVWEREVVDALVPLGFKVLLTTRDWSVVVVPARRLDLGDMTEEEALELLRKTSGTVGQPGDYVR 415          
BLAST of mRNA_E-siliculosus-1a_F_contig10844.585.1 vs. uniprot
Match: A0A6H5KU94_9PHAE (NB-ARC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KU94_9PHAE)

HSP 1 Score: 328 bits (842), Expect = 1.620e-101
Identity = 180/254 (70.87%), Postives = 200/254 (78.74%), Query Frame = -3
Query:    1 KRVNRGTQHKSIGEALDAIDRDVVRQFTAIAAKSAIHAEAVKTALEELRPSSLPDMAAVPAGALELPRSSYVERAAVQEVADGLTAPEDRRAPYTVVGMGGGGKSVLASAVVRKPSVREHFRGGIFWVRLGRGAKNSLLALLQGLAREMGATPTDVPHMTPHVLDSLEQVKQHLAAVASTGTSPRLVVLDDVWEREVVDAFVPLGFKVLLTTRDRSVVGVPAGRLDLGDMTEEEALELLRKTSGTVGQPGDDVR 762
            K + R ++HK + + L  ID DV R   AI+AK A       T L    P SLPDMA VPA A+ L  S YVERAAV++VADG+T PE+ RAPYTV GMGGGGKSVLASAVVRK SVREHFRGGIFW+ +GRGAK  LL LLQGL  +MGA PTD PH  PHVLDSLEQV++HL AVASTGTSPRLVVLDDVWEREVVDA +PLGFKVL+TTRDRSVVGVP   L+LGDMTEEEALELL KTSGTVG+PGD VR
Sbjct:   90 KSITRCSRHKELEKQLQGIDGDVRRVLDAISAKGA-----TGTVL----PPSLPDMAKVPAEAVALSDSLYVERAAVRKVADGITNPEEPRAPYTVFGMGGGGKSVLASAVVRKSSVREHFRGGIFWLTVGRGAKKRLLPLLQGLTGDMGAAPTDTPHGVPHVLDSLEQVQRHLGAVASTGTSPRLVVLDDVWEREVVDALLPLGFKVLVTTRDRSVVGVPTRCLELGDMTEEEALELLLKTSGTVGRPGDSVR 334          
BLAST of mRNA_E-siliculosus-1a_F_contig10844.585.1 vs. uniprot
Match: A0A6H5LJA6_9PHAE (NB-ARC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LJA6_9PHAE)

HSP 1 Score: 306 bits (783), Expect = 6.070e-98
Identity = 160/199 (80.40%), Postives = 174/199 (87.44%), Query Frame = -3
Query:    1 MAAVPAGALELPRSSYVERAAVQEVADGLTAPEDRRAPYTVVGMGGGGKSVLASAVVRKPSVREHFRGGIFWVRLGRGAKNSLLALLQGLAREMGATPTDVPHMTPHVLDSLEQVKQHLAAVASTGTSPRLVVLDDVWEREVVDAFVPLGFKVLLTTRDRSVVGVPAGRLDLGDMTEEEALELLRKTSGTVGQPGDDVR 597
            MAAVPAGAL LP+S YVERAAVQEVADGL  PE+ RAPY VVGMGGGGK++L SAVVRK +VREHFRGG+FW+R+GR AKNSLL+LLQGLAREM A PTD PH  PHVL+SLEQVKQHLA VAS GTSPRLVVLDDVWEREVVDA + LG KVL+TTRDRSVVGV  G L+LGDMTEEEALELL KTS TVGQPG +VR
Sbjct:    1 MAAVPAGALTLPQS-YVERAAVQEVADGLIKPEEPRAPYAVVGMGGGGKTMLVSAVVRKSNVREHFRGGVFWMRVGRHAKNSLLSLLQGLAREMSAAPTDTPHGVPHVLESLEQVKQHLATVASAGTSPRLVVLDDVWEREVVDALLSLGLKVLVTTRDRSVVGVSGGLLELGDMTEEEALELLLKTSRTVGQPGHEVR 198          
BLAST of mRNA_E-siliculosus-1a_F_contig10844.585.1 vs. uniprot
Match: D8LPV9_ECTSI (NB-ARC and TPR repeat-containig protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LPV9_ECTSI)

HSP 1 Score: 290 bits (742), Expect = 3.700e-87
Identity = 153/216 (70.83%), Postives = 170/216 (78.70%), Query Frame = -3
Query:    1 EAVKTALEELRPSSLPDMAAVPAGALELPRSSYVERAAVQEVADGLTAPEDRRAPYTVVGMGGGGKSVLASAVVRKPSVREHFRGGIFWVRLGRGAKNSLLALLQGLAREMGATPTDVPHMTPHVLDSLEQVKQHLAAVASTGTSPRLVVLDDVWEREVVDAFVPLGFKVLLTTRDRSVVGVPAGRLDLGDMTEEEALELLRKTSGTVGQPGDDVR 648
            +A  T + ++ P +LP  AAVP GAL LPRS YVER  VQE    L  PE   APY +VGMGGGGK+VLASA+VRK SV EHFRGGIFW+ +GRGA  SLL  LQGLAREMGA PTD PH  PHV DSLEQV QHLAAV S G+SPRLVVLDDVWEREVV AF+ +G KVL+TTRDRS+VGVP G L+LGDM E+EALELL KTSGTVGQPGD VR
Sbjct:  220 KAFSTMIRDVLPPTLPQRAAVPTGALALPRS-YVERPGVQEAMGDLMDPEKALAPYMIVGMGGGGKTVLASALVRKSSVLEHFRGGIFWMEMGRGANKSLLHRLQGLAREMGAAPTDAPHGVPHVFDSLEQVMQHLAAVVSRGSSPRLVVLDDVWEREVVAAFLGVGLKVLVTTRDRSIVGVPGGLLELGDMAEDEALELLWKTSGTVGQPGDGVR 434          
BLAST of mRNA_E-siliculosus-1a_F_contig10844.585.1 vs. uniprot
Match: A0A6H5KQU6_9PHAE (NB-ARC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQU6_9PHAE)

HSP 1 Score: 226 bits (575), Expect = 1.430e-65
Identity = 132/209 (63.16%), Postives = 153/209 (73.21%), Query Frame = -3
Query:   34 EAVKTALEEL----RPSSLPDMAAVPAGALELPRSSYVERAAVQEVADGLTAPEDRRAPYTVVGMGGGGKSVLASAVVRKPSVREHFRGGIFWVRLGRGAKNSLLALLQGLAREMGATPTDVPHMTPHVLDSLEQVKQHLAAVASTGTSPRLVVLDDVWEREVVDAFVPLGFKVLLTTRDRSVVGVPAGRLDLGDMTEEEALELLRKTS 648
            E V++ LEE+      SSL + AAVPAGA  LP   YV R+ V++  +GL   E+  AP+ VVGM G GK+VL SAVVR   VREHF GGIFW+R+GRGAK SLL L+Q LAREMGA      H  P+VLD LEQV QH+AAVASTGTSPRLVVLDDVWEREVVDA + L  KVL+TTRD SVVGVP  RL+  DM E+EA+ELL KTS
Sbjct:   72 EHVESKLEEIDREVARSSLSNRAAVPAGAHGLPHY-YVARSVVRKAVEGLINAEEPSAPFVVVGMSGAGKTVLVSAVVRHLRVREHFHGGIFWMRVGRGAKTSLLPLMQTLAREMGA------HGVPYVLDGLEQVGQHVAAVASTGTSPRLVVLDDVWEREVVDALLRLKLKVLVTTRDHSVVGVPGTRLEPEDMAEDEAMELLLKTS 273          
BLAST of mRNA_E-siliculosus-1a_F_contig10844.585.1 vs. uniprot
Match: A0A6H5JLW6_9PHAE (NB-ARC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLW6_9PHAE)

HSP 1 Score: 202 bits (514), Expect = 8.760e-58
Identity = 106/148 (71.62%), Postives = 119/148 (80.41%), Query Frame = -3
Query:   25 MGGGGKSVLASAVVRKPSVREHFRGGIFWVRLGRGAKNSLLALLQGLAREMGATPTDVPHMTPHVLDSLEQVKQHLAAVASTGTSPRLVVLDDVWEREVVDAFVPLGFKVLLTTRDRSVVGVPAGRLDLGDMTEEEALELLRKTSGTV 468
            MGGGG++VL SAVVR+ SV E+FRGGIF + +GRGAKN LL LLQGLAREMGA P   PH  P  LDSLE V QHL  V STGTSPRLVVLDDV EREVV+A +PLG K+++TTRDRSVVGVP G L++GDMTEEEALELL   SG V
Sbjct:    1 MGGGGETVLVSAVVRELSVLEYFRGGIFLMSVGRGAKNRLLPLLQGLAREMGAAPAHAPHGNPGDLDSLEHVMQHLTTVVSTGTSPRLVVLDDVLEREVVEALLPLGLKLVVTTRDRSVVGVPGGCLEVGDMTEEEALELLMLASGAV 148          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig10844.585.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KXS7_9PHAE1.950e-11987.61NB-ARC domain-containing protein n=1 Tax=Ectocarpu... [more]
D7G722_ECTSI2.100e-11486.70NB-ARC and TPR repeat-containing protein n=1 Tax=E... [more]
D7G720_ECTSI9.570e-11286.70NB-ARC and TPR repeat-containing protein n=1 Tax=E... [more]
D7FUD7_ECTSI4.590e-10576.33NB-ARC and TPR repeat-containing protein n=1 Tax=E... [more]
D8LGG5_ECTSI3.680e-10487.26NB-ARC and TPR repeat-containing protein n=1 Tax=E... [more]
A0A6H5KU94_9PHAE1.620e-10170.87NB-ARC domain-containing protein n=1 Tax=Ectocarpu... [more]
A0A6H5LJA6_9PHAE6.070e-9880.40NB-ARC domain-containing protein n=1 Tax=Ectocarpu... [more]
D8LPV9_ECTSI3.700e-8770.83NB-ARC and TPR repeat-containig protein n=1 Tax=Ec... [more]
A0A6H5KQU6_9PHAE1.430e-6563.16NB-ARC domain-containing protein n=1 Tax=Ectocarpu... [more]
A0A6H5JLW6_9PHAE8.760e-5871.62NB-ARC domain-containing protein n=1 Tax=Ectocarpu... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig10844contigE-siliculosus-1a_F_contig10844:1473..2236 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-19
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Properties
Property NameValue
Start0
Stop1
Cds size621
Model size765
Exons1
Hectar predicted targeting categoryother localisation
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927585.9243858-CDS-E-siliculosus-1a_F_contig10844:1472..20931622927585.9243858-CDS-E-siliculosus-1a_F_contig10844:1472..2093Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig10844 1473..2093 +
1696318598.6830087-CDS-E-siliculosus-1a_F_contig10844:1472..20931696318598.6830087-CDS-E-siliculosus-1a_F_contig10844:1472..2093Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig10844 1473..2093 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927585.9652476-UTR-E-siliculosus-1a_F_contig10844:2093..22361622927585.9652476-UTR-E-siliculosus-1a_F_contig10844:2093..2236Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig10844 2094..2236 +
1696318598.6902068-UTR-E-siliculosus-1a_F_contig10844:2093..22361696318598.6902068-UTR-E-siliculosus-1a_F_contig10844:2093..2236Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig10844 2094..2236 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig10844.585.1prot_E-siliculosus-1a_F_contig10844.585.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalepolypeptideE-siliculosus-1a_F_contig10844 1473..2093 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-siliculosus-1a_F_contig10844.585.1

>prot_E-siliculosus-1a_F_contig10844.585.1 ID=prot_E-siliculosus-1a_F_contig10844.585.1|Name=mRNA_E-siliculosus-1a_F_contig10844.585.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=207bp
PDIVSRLTHSPARLPEQLQRLFLRHVSQIQASGRHTNNRPVTRGQQHLES
QRNKRVHDLAFPHIVQHHQAWGRAGGCDCSQVLLHLLEAVKDVRRHVRNI
RRRRAHLPGEALKESQEAILGAPPQSHPENTAAEVFPHARLANDSRGQHA
LPPSTHTDDGVGGTAILRGGEAVGNFLYRSSLHVAAAGQLKRSCGHRGHV
RQARRA*
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mRNA from alignment at E-siliculosus-1a_F_contig10844:1473..2236+

Legend: CDSpolypeptideUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-siliculosus-1a_F_contig10844.585.1 ID=mRNA_E-siliculosus-1a_F_contig10844.585.1|Name=mRNA_E-siliculosus-1a_F_contig10844.585.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=764bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig10844:1473..2236+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
CCGGACATCGTCTCCAGGCTGACCCACAGTCCCGCTCGTCTTCCGGAGCA GCTCCAGCGCCTCTTCCTCCGTCATGTCTCCCAGATCCAAGCGTCCGGCC GGCACACCAACAACCGACCGGTCACGCGTGGTCAGCAGCACCTTGAATCC CAGAGGAACAAACGCGTCCACGACCTCGCGTTCCCACACATCGTCCAGCA CCACCAGGCGTGGGGACGTGCCGGTGGATGCGACTGCAGCCAGGTGCTGC TTCACCTGCTCGAGGCTGTCAAGGACGTGAGGCGTCATGTGCGGAACATC CGTCGGCGTCGCGCCCATCTCCCTGGCGAGGCCTTGAAGGAGAGCCAGGA GGCTATTCTTGGCGCCCCTCCCCAGTCTCACCCAGAAAATACCGCCGCGG AAGTGTTCCCTCACGCTCGGCTTGCGAACGACAGCAGAGGCCAGCACGCT CTTCCCCCCTCCACCCATACCGACGACGGTGTAGGGGGCACGGCGATCCT CCGGGGCGGTGAGGCCGTCGGCAACTTCTTGTACCGCAGCTCGCTCCACG TAGCTGCTGCGGGGCAACTCAAGCGCTCCTGCGGGCACCGCGGCCATGTC CGGCAAGCTCGAAGGGCGTAATTCTTCCAAAGCAGTTTTCACCGCCTCCG CGTGGATAGCCGATTTTGCGGCAATGGCGGTGAACTGCCGAACGACGTCC CTGTCGATGGCGTCCAAAGCCTCCCCGATCGACTTGTGCTGGGTTCCTCT GTTGACCCTCTTGG
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Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig10844:1473..2236+

>mRNA_E-siliculosus-1a_F_contig10844.585.1 ID=mRNA_E-siliculosus-1a_F_contig10844.585.1|Name=mRNA_E-siliculosus-1a_F_contig10844.585.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=1242bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig10844:1473..2236+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
CCGGACATCGTCTCCAGGCTGACCCACAGTCCCGCTCGTCTTCCGGAGCA
GCTCCAGCGCCTCTTCCTCCGTCATGTCTCCCAGATCCAAGCGTCCGGCC
GGCACACCAACAACCGACCGGTCACGCGTGGTCAGCAGCACCTTGAATCC
CAGAGGAACAAACGCGTCCACGACCTCGCGTTCCCACACATCGTCCAGCA
CCACCAGGCGTGGGGACGTGCCGGTGGATGCGACTGCAGCCAGGTGCTGC
TTCACCTGCTCGAGGCTGTCAAGGACGTGAGGCGTCATGTGCGGAACATC
CGTCGGCGTCGCGCCCATCTCCCTGGCGAGGCCTTGAAGGAGAGCCAGGA
GGCTATTCTTGGCGCCCCTCCCCAGTCTCACCCAGAAAATACCGCCGCGG
AAGTGTTCCCTCACGCTCGGCTTGCGAACGACAGCAGAGGCCAGCACGCT
CTTCCCCCCTCCACCCATACCGACGACGGTGTAGGGGGCACGGCGATCCT
CCGGGGCGGTGAGGCCGTCGGCAACTTCTTGTACCGCAGCTCGCTCCACG
TAGCTGCTGCGGGGCAACTCAAGCGCTCCTGCGGGCACCGCGGCCATGTC
CGGCAAGCTCGAAGGGCGTAACCGGACATCGTCTCCAGGCTGACCCACAG
TCCCGCTCGTCTTCCGGAGCAGCTCCAGCGCCTCTTCCTCCGTCATGTCT
CCCAGATCCAAGCGTCCGGCCGGCACACCAACAACCGACCGGTCACGCGT
GGTCAGCAGCACCTTGAATCCCAGAGGAACAAACGCGTCCACGACCTCGC
GTTCCCACACATCGTCCAGCACCACCAGGCGTGGGGACGTGCCGGTGGAT
GCGACTGCAGCCAGGTGCTGCTTCACCTGCTCGAGGCTGTCAAGGACGTG
AGGCGTCATGTGCGGAACATCCGTCGGCGTCGCGCCCATCTCCCTGGCGA
GGCCTTGAAGGAGAGCCAGGAGGCTATTCTTGGCGCCCCTCCCCAGTCTC
ACCCAGAAAATACCGCCGCGGAAGTGTTCCCTCACGCTCGGCTTGCGAAC
GACAGCAGAGGCCAGCACGCTCTTCCCCCCTCCACCCATACCGACGACGG
TGTAGGGGGCACGGCGATCCTCCGGGGCGGTGAGGCCGTCGGCAACTTCT
TGTACCGCAGCTCGCTCCACGTAGCTGCTGCGGGGCAACTCAAGCGCTCC
TGCGGGCACCGCGGCCATGTCCGGCAAGCTCGAAGGGCGTAA
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