mRNA_E-siliculosus-1a_F_contig1083.577.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-siliculosus-1a_F_contig1083.577.1
Unique NamemRNA_E-siliculosus-1a_F_contig1083.577.1
TypemRNA
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Homology
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BLAST of mRNA_E-siliculosus-1a_F_contig1083.577.1 vs. uniprot
Match: D8LRC0_ECTSI (W2 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LRC0_ECTSI)

HSP 1 Score: 401 bits (1031), Expect = 2.180e-137
Identity = 238/254 (93.70%), Postives = 239/254 (94.09%), Query Frame = 1 
Query:    1 TRYNEEDERAIVNGAHTNATLQQLVHKYVELFVLCPNCRLPESKYKIKNGAIFHKCYACGAKEMVDMSHKLCTYIVNTAKKAKKGKDKDXXXXXXXXXXXXXXXXXXXXXXNGDDSVXXXXXXXXXXXXXXXXENTSDDGETKTTVDEFGDVVATSGSLEVEDAVAFDDSVAAIRRHLDDGTSNENIFEEIRTAQTFAAFPVHYRIHLFVAASFATADKVTKDDIESRAAMFDMLKSRPDDQRHIIGAFELLCQ 762
            TRYNEEDERAIVNGAHTNATLQQLVHKYVELFVLCPNCRLPESKYKIKNGAIFHKCYACGAKEMVDMSHKLCTYIVNTAKKAKK K   XXXXXXXXXXXXXXXXX     NGDDS      XXXXXXXXXXXENTSDDGETKTTV+EFGDVVATSGSLEVEDAVAFDDSVAAIRRHLDDGTSNENIFEEIRTAQTFAAFPVHYRIHLFVAASFATADKVTKDDIESRAAMFDMLKSRPDDQRHIIGAFELLCQ
Sbjct:   69 TRYNEEDERAIVNGAHTNATLQQLVHKYVELFVLCPNCRLPESKYKIKNGAIFHKCYACGAKEMVDMSHKLCTYIVNTAKKAKKSKXXXXXXXXXXXXXXXXXXXXEEVSLNGDDSAKEKKDXXXXXXXXXXXENTSDDGETKTTVNEFGDVVATSGSLEVEDAVAFDDSVAAIRRHLDDGTSNENIFEEIRTAQTFAAFPVHYRIHLFVAASFATADKVTKDDIESRAAMFDMLKSRPDDQRHIIGAFELLCQ 322
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BLAST of mRNA_E-siliculosus-1a_F_contig1083.577.1 vs. uniprot
Match: A0A6T5QBS0_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6T5QBS0_HETAK)

HSP 1 Score: 150 bits (380), Expect = 1.460e-39
Identity = 140/261 (53.64%), Postives = 168/261 (64.37%), Query Frame = 1 
Query:    1 TRYNEEDERAIVNGAHTNATLQQLVHKYVELFVLCPNCRLPESKYKIKNGAIFHKCYACGAKEMVDMSHKLCTYIVNTAKKAK---KGKDKDXXXXXXXXXXXXXXXXXXXXXXNGDDSVXXXXXXXXXXXXXXXXENTSDDGETKTTVDEFGDVV---ATSGSLEVEDAVAFDDSVAAIRRHL-DDGTSNENIFEEIRTAQTFAAFPVHYRIHLFVAASFATADKVTKDDIESRAAMFDMLKS-RPDDQRHIIGAFELLC 759
            T++ EE+E+A+VNGAH++  LQQ+V +Y + FVLCPNCRLPE+ YKIK+  I+HKC ACGAKEMVDM HKL TYI+   KKAK   K K   XXXXXXXXXXXXXXXXXXXXXX      XXXXXXXXXXXXXXXX                       A  G L VED  AFD  V ++RR L   G     + EE+R AQT ++FP H+R+HL VAA+FA    V   ++ +RAA      +  P   RH+IGAFELLC
Sbjct:   68 TKWVEEEEKALVNGAHSDNDLQQMVFRYCQAFVLCPNCRLPETDYKIKSETIWHKCMACGAKEMVDMQHKLTTYILGNVKKAKLAEKAKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGLGGLSVEDQSAFDTGVESVRRFLASPGWDTPLLMEELRVAQTLSSFPAHFRVHLLVAAAFAEGP-VGAAEVAARAADLRAAHNGNPILARHMIGAFELLC 327
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BLAST of mRNA_E-siliculosus-1a_F_contig1083.577.1 vs. uniprot
Match: A0A7S3DU57_9STRA (Hypothetical protein n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S3DU57_9STRA)

HSP 1 Score: 129 bits (324), Expect = 1.760e-33
Identity = 61/89 (68.54%), Postives = 74/89 (83.15%), Query Frame = 1 
Query:    1 TRYNEEDERAIVNGAHTNATLQQLVHKYVELFVLCPNCRLPESKYKIKNGAIFHKCYACGAKEMVDMSHKLCTYIVNTAKKAKKGKDKD 267
            +RY+ E +RAIVNGAHT+A LQ L++KYVE FVLCPNC LPE++YKIK+  I+HKC ACGAKEMVDMSH+LC YI+   KKAKK K K+
Sbjct:   73 SRYSAETDRAIVNGAHTDAVLQDLINKYVEKFVLCPNCGLPETEYKIKSEVIYHKCAACGAKEMVDMSHRLCNYILAEDKKAKKDKGKN 161
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BLAST of mRNA_E-siliculosus-1a_F_contig1083.577.1 vs. uniprot
Match: B8BW00_THAPS (W2 domain-containing protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BW00_THAPS)

HSP 1 Score: 132 bits (333), Expect = 8.570e-33
Identity = 130/261 (49.81%), Postives = 164/261 (62.84%), Query Frame = 1 
Query:    1 TRYNEEDERAIVNGAHTNATLQQLVHKYVELFVLCPNCRLPESKYKIKNGAIFHKCYACGAKEMVDMSHKLCTYIVNTAKKAKK-----GKDKDXXXXXXXXXXXXXXXXXXXXXXNGDDSVXXXXXXXXXXXXXXXXENTSDDGETKTTVDEFGDVVATSGSLEVEDAVAFDDSVAAIRRHLDDG--TSNENIFEEIRTAQTFAAFPVHYRIHLFVAASFATADKVTKDDIESRA-AMFDMLKSRPDDQRHIIGAFELLC 759
            T YN E +RA+VNGAHT+  LQQ+VHKY+ELFVLCPNCRLPE++YKIK+G I+HKC ACG K+ VDM+HKLCTYI+   KKAK+     GK   XXXXXXXXXXXXXXXXXXXXXX      XXXXXXXXXXXXXXXX             D + D         V+DA A   +V A+++ L D    S   I E++   Q  +      +IH+FV + F T D   +  +E  A A+  + + +   +RH+I +FE LC
Sbjct:   72 TTYNTETDRAVVNGAHTDQVLQQMVHKYIELFVLCPNCRLPETEYKIKSGMIYHKCAACGNKDAVDMTHKLCTYILAQDKKAKQDAKKSGKKDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDYDSYDDDDNGGTEEHVDDANAMALAVEAMKKFLADNPDASPSAIAEKVVNEQMASGLKSQDKIHIFVQSVF-TPDFYKQKQVEKHAPAIAKITQGKNVMERHLIASFEGLC 331
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BLAST of mRNA_E-siliculosus-1a_F_contig1083.577.1 vs. uniprot
Match: A0A1Z5JLW0_FISSO (Translation initiation factor 5 n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JLW0_FISSO)

HSP 1 Score: 132 bits (332), Expect = 1.100e-32
Identity = 125/260 (48.08%), Postives = 162/260 (62.31%), Query Frame = 1 
Query:    1 TRYNEEDERAIVNGAHTNATLQQLVHKYVELFVLCPNCRLPESKYKIKNGAIFHKCYACGAKEMVDMSHKLCTYIVNTAKKAKKGKDKDXXXXXXXXXXXXXXXXXXXXXXNGDDSVXXXXXXXXXXXXXXXXENTSDDGETKTTVDEFGDVVATSGSLE----VEDAVAFDDSVAAIRRHLDDGTS--NENIFEEIRTAQTFAAFPVHYRIHLFVAASFATADKVTKDDIESRAAMFDML-KSRPDDQRHIIGAFELLC 759
            +RY+ + +RAIVNGAHT+ATLQ+L+H+Y+E FVLCP CRLPE+KYKIK+  I+H C ACGAK+MVDMSHKLC YI+   KKAKK K K XXXXXXXXXXXXXXXXXXXXXX      XXXXXXXXXXXXX   +N   D  +    DEF               V+D  AF  +V A +  + +  +  ++ + E +   Q  +A   H +I + + A+F T+D     ++E  A +   +  S    +RHII A E  C
Sbjct:   73 SRYSADTDRAIVNGAHTDATLQELMHRYIEKFVLCPTCRLPETKYKIKSDTIYHSCAACGAKDMVDMSHKLCNYILAENKKAKKDKGKXXXXXXXXXXXXXXXXXXXXXXX-----XXXXXXXXXXXXXXNGDKNYIKDALSGKKDDEFXXXXXXXXXXXXTEVVDDDSAFQLAVDATKTFIKENANATDDQLIEYVTNQQMASALKSHDKIRILILAAF-TSDFYKNKEVEKYAPVIARIANSNRIMERHIISALEAFC 326
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BLAST of mRNA_E-siliculosus-1a_F_contig1083.577.1 vs. uniprot
Match: A0A7S1D9Q5_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1D9Q5_CYCTE)

HSP 1 Score: 130 bits (327), Expect = 6.810e-32
Identity = 61/90 (67.78%), Postives = 74/90 (82.22%), Query Frame = 1 
Query:    1 TRYNEEDERAIVNGAHTNATLQQLVHKYVELFVLCPNCRLPESKYKIKNGAIFHKCYACGAKEMVDMSHKLCTYIVNTAKKAKK-GKDKD 267
            T YN + +RA+VNGAHT+ TLQ L+H+Y+E FVLCPNC LPE++YKIKN  I+HKC ACG+K+MVDMSHKLCTYI+   KKAKK  K KD
Sbjct:   73 TTYNPDTDRAVVNGAHTDDTLQDLMHRYIEKFVLCPNCSLPETEYKIKNDCIYHKCAACGSKDMVDMSHKLCTYILAQDKKAKKEAKSKD 162
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BLAST of mRNA_E-siliculosus-1a_F_contig1083.577.1 vs. uniprot
Match: B7G289_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7G289_PHATC)

HSP 1 Score: 130 bits (327), Expect = 7.250e-32
Identity = 61/88 (69.32%), Postives = 71/88 (80.68%), Query Frame = 1 
Query:    1 TRYNEEDERAIVNGAHTNATLQQLVHKYVELFVLCPNCRLPESKYKIKNGAIFHKCYACGAKEMVDMSHKLCTYIVNTAKKAKKGKDK 264
            TRY+ E +RA+VNGAH +A LQ L+H+Y+E FVLCPNC LPE+ YKIKN AI+HKC ACGAKEMVDMSHKLC YI+   KKAKK   K
Sbjct:   73 TRYSAETDRAVVNGAHMDAVLQDLMHRYIERFVLCPNCNLPETDYKIKNDAIWHKCAACGAKEMVDMSHKLCNYILAEDKKAKKDSKK 160
[Close]
BLAST of mRNA_E-siliculosus-1a_F_contig1083.577.1 vs. uniprot
Match: A0A7S2KDW7_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2KDW7_9STRA)

HSP 1 Score: 129 bits (325), Expect = 1.000e-31
Identity = 123/256 (48.05%), Postives = 155/256 (60.55%), Query Frame = 1 
Query:    1 TRYNEEDERAIVNGAHTNATLQQLVHKYVELFVLCPNCRLPESKYKIKNGAIFHKCYACGAKEMVDMSHKLCTYIVNTAKKAKKGKDKDXXXXXXXXXXXXXXXXXXXXXXNGDDSVXXXXXXXXXXXXXXXXENTSDDGETKTTVDEFGDVVATSGSLE-VEDAVAFDDSVAAIRRHLDDG--TSNENIFEEIRTAQTFAAFPVHYRIHLFVAASFATADKVTKDDIESRAAMFDMLKSRPDDQRHIIGAFELLC 759
            T Y++E  RA+VNG HT+A LQQ VHKYVE FV+CPNC LPE+ YKIK+G I HKC ACGAKEMVDMSHKL  YI+   KKAK+     XXXXXXXXXXXXX      XXX      XXXXXXXXXXXXXXXX     DGE +  V   GD+      +E V+D  A   +V A ++ L D    +   I +++   Q  +      RIH+FV A+F T    TK   ++  ++  + + +   +RH+I A E LC
Sbjct:   71 TTYSDETNRAVVNGHHTDAVLQQAVHKYVEAFVICPNCGLPETDYKIKSGVITHKCAACGAKEMVDMSHKLTNYILAQDKKAKQDAXXXXXXXXXXXXXXXXGDSDEEXXXX---XXXXXXXXXXXXXXXXXXXXXXXDGELEDAV---GDISLGDDDVEHVDDDNAMALAVEATKKFLSDNPDATPAAISDKVANEQMASGLKSQDRIHIFVRAAFTTDFFKTKQVAKNAPSISKITQGKTVMERHLISACECLC 320
[Close]
BLAST of mRNA_E-siliculosus-1a_F_contig1083.577.1 vs. uniprot
Match: A0A7S3LEE8_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3LEE8_9STRA)

HSP 1 Score: 129 bits (324), Expect = 1.870e-31
Identity = 60/89 (67.42%), Postives = 75/89 (84.27%), Query Frame = 1 
Query:    1 TRYNEEDERAIVNGAHTNATLQQLVHKYVELFVLCPNCRLPESKYKIKNGAIFHKCYACGAKEMVDMSHKLCTYIVNTAKKAKK-GKDK 264
            TRY+ E +RAI+NGAHT+ATLQ+L+ +Y++ FVLCPNC LPE++YKIK+  +FHKC ACGAKEMVDMSHKLC +I+   KKAKK GK K
Sbjct:   73 TRYSAETDRAIINGAHTDATLQELIKRYIDKFVLCPNCNLPETEYKIKSDTVFHKCMACGAKEMVDMSHKLCNFILAENKKAKKDGKGK 161
[Close]
BLAST of mRNA_E-siliculosus-1a_F_contig1083.577.1 vs. uniprot
Match: A0A1E7FBJ2_9STRA (eIF-5_eIF-2B-domain-containing protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FBJ2_9STRA)

HSP 1 Score: 127 bits (320), Expect = 7.920e-31
Identity = 61/89 (68.54%), Postives = 73/89 (82.02%), Query Frame = 1 
Query:    1 TRYNEEDERAIVNGAHTNATLQQLVHKYVELFVLCPNCRLPESKYKIKNGAIFHKCYACGAKEMVDMSHKLCTYIVNTAKKAKKGKDKD 267
            T YNEE +RAIVNG+HT+ TLQ+L+H+YVE FVLCP C LPE+KY IKNG I+HKC ACGAKEMVDM+HKL  YI+   KK KK K+K+
Sbjct:   73 TTYNEETDRAIVNGSHTDDTLQKLMHRYVETFVLCPTCGLPETKYSIKNGTIWHKCAACGAKEMVDMNHKLTNYILAQDKKNKKLKNKN 161
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1083.577.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LRC0_ECTSI2.180e-13793.70W2 domain-containing protein n=2 Tax=Ectocarpus Ta... [more]
A0A6T5QBS0_HETAK1.460e-3953.64Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S3DU57_9STRA1.760e-3368.54Hypothetical protein n=1 Tax=Amphiprora paludosa T... [more]
B8BW00_THAPS8.570e-3349.81W2 domain-containing protein n=1 Tax=Thalassiosira... [more]
A0A1Z5JLW0_FISSO1.100e-3248.08Translation initiation factor 5 n=2 Tax=Fistulifer... [more]
A0A7S1D9Q5_CYCTE6.810e-3267.78Hypothetical protein n=1 Tax=Cyclophora tenuis Tax... [more]
B7G289_PHATC7.250e-3269.32Predicted protein n=2 Tax=Phaeodactylum tricornutu... [more]
A0A7S2KDW7_9STRA1.000e-3148.05Hypothetical protein n=1 Tax=Skeletonema marinoi T... [more]
A0A7S3LEE8_9STRA1.870e-3167.42Hypothetical protein n=1 Tax=Amphora coffeiformis ... [more]
A0A1E7FBJ2_9STRA7.920e-3168.54eIF-5_eIF-2B-domain-containing protein n=1 Tax=Fra... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig1083contigE-siliculosus-1a_F_contig1083:210..3353 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-19
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Properties
Property NameValue
Start0
Stop0
Cds size762
Model size762
Exons6
Hectar predicted targeting categoryother localisation
BRITEko00000,ko00001,ko03012,ko03019,ko03036,ko04121
Best eggNOG OGNA|NA|NA
Best tax levelEukaryota
COG Functional cat.J
EggNOG OGsCOG1601@1,KOG2767@2759
EggNOG free text desc.translation initiation factor activity
GOsGO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005829,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044424,GO:0044444,GO:0044464
KEGG Pathwayko03013,ko03440,ko04214,map03013,map03440,map04214
KEGG koko:K03262,ko:K10683
Preferred nameEIF5
Seed eggNOG ortholog2880.D8LRC0
Seed ortholog evalue7.7e-111
Seed ortholog score406.8
Taxonomic scopeEukaryota
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig1083.577.1prot_E-siliculosus-1a_F_contig1083.577.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalepolypeptideE-siliculosus-1a_F_contig1083 210..3353 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927584.399516-CDS-E-siliculosus-1a_F_contig1083:209..4041622927584.399516-CDS-E-siliculosus-1a_F_contig1083:209..404Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1083 210..404 -
1696318597.9714746-CDS-E-siliculosus-1a_F_contig1083:209..4041696318597.9714746-CDS-E-siliculosus-1a_F_contig1083:209..404Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1083 210..404 -
1622927584.410075-CDS-E-siliculosus-1a_F_contig1083:888..10151622927584.410075-CDS-E-siliculosus-1a_F_contig1083:888..1015Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1083 889..1015 -
1696318597.9808989-CDS-E-siliculosus-1a_F_contig1083:888..10151696318597.9808989-CDS-E-siliculosus-1a_F_contig1083:888..1015Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1083 889..1015 -
1622927584.4202793-CDS-E-siliculosus-1a_F_contig1083:1404..14661622927584.4202793-CDS-E-siliculosus-1a_F_contig1083:1404..1466Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1083 1405..1466 -
1696318597.9883153-CDS-E-siliculosus-1a_F_contig1083:1404..14661696318597.9883153-CDS-E-siliculosus-1a_F_contig1083:1404..1466Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1083 1405..1466 -
1622927584.4313838-CDS-E-siliculosus-1a_F_contig1083:1995..20671622927584.4313838-CDS-E-siliculosus-1a_F_contig1083:1995..2067Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1083 1996..2067 -
1696318597.9958174-CDS-E-siliculosus-1a_F_contig1083:1995..20671696318597.9958174-CDS-E-siliculosus-1a_F_contig1083:1995..2067Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1083 1996..2067 -
1622927584.4507287-CDS-E-siliculosus-1a_F_contig1083:2686..28621622927584.4507287-CDS-E-siliculosus-1a_F_contig1083:2686..2862Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1083 2687..2862 -
1696318598.0032516-CDS-E-siliculosus-1a_F_contig1083:2686..28621696318598.0032516-CDS-E-siliculosus-1a_F_contig1083:2686..2862Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1083 2687..2862 -
1622927584.4709325-CDS-E-siliculosus-1a_F_contig1083:3223..33531622927584.4709325-CDS-E-siliculosus-1a_F_contig1083:3223..3353Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1083 3224..3353 -
1696318598.0105417-CDS-E-siliculosus-1a_F_contig1083:3223..33531696318598.0105417-CDS-E-siliculosus-1a_F_contig1083:3223..3353Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1083 3224..3353 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-siliculosus-1a_F_contig1083.577.1

>prot_E-siliculosus-1a_F_contig1083.577.1 ID=prot_E-siliculosus-1a_F_contig1083.577.1|Name=mRNA_E-siliculosus-1a_F_contig1083.577.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=254bp
TRYNEEDERAIVNGAHTNATLQQLVHKYVELFVLCPNCRLPESKYKIKNG
AIFHKCYACGAKEMVDMSHKLCTYIVNTAKKAKKGKDKDAAKDSKERKRE
KKEKKKEEVSQNGDDSVKEKKEKKKKDKKKRDKENTSDDGETKTTVDEFG
DVVATSGSLEVEDAVAFDDSVAAIRRHLDDGTSNENIFEEIRTAQTFAAF
PVHYRIHLFVAASFATADKVTKDDIESRAAMFDMLKSRPDDQRHIIGAFE
LLCQ
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mRNA from alignment at E-siliculosus-1a_F_contig1083:210..3353-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-siliculosus-1a_F_contig1083.577.1 ID=mRNA_E-siliculosus-1a_F_contig1083.577.1|Name=mRNA_E-siliculosus-1a_F_contig1083.577.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=3144bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1083:210..3353- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
ACCCGCTACAACGAGGAGGACGAGCGCGCTATCGTGAACGGTGCGCACAC
GAACGCCACCCTCCAGCAGCTGGTGCACAAATACGTGGAGCTCTTCGTCC
TCTGCCCCAACTGCCGCCTCCCCGAGTCGAGTGAGTTTTTGCTCTTCTCC
GTTGCACTCTTTAAAGAACAACGGGTATTTGTACGTTTCTGTGTGTTGAG
TATTGAGTAAGTGATGAGTGAGAAGGGGCCGGGCGGGTGTTTTGGGCGGG
GATTCATAGATTCACTGGTTGTTGCACCCCAACTCCTGTCTTAGCTTGTT
GTTGCACGACGAAGACATGCCCTACGTATGAAAGGTGTCTTTTCGCCACT
TTCCATTGGGGTGACCCCCGCTCGCATTCATTACCGGGGGTCGGCGGGCT
ATCACGTACAGCACCCCTTTTCTCCCACCGTCAATCTCTCATGACCCCTT
TCTGCTGCTGCTTCTGCCTCTGCTTCTGCCTTCTGTTGCAGAGTACAAGA
TCAAGAACGGCGCGATCTTCCACAAGTGCTACGCCTGCGGGGCCAAGGAG
ATGGTGGACATGTCTCACAAGCTCTGCACGTACATCGTCAACACCGCAAA
GAAGGCCAAGAAGGGCAAGGATAAGGACGCGGCCAAGGACTCGAAGGAGA
GGAAGCGCGAGAAGAAGGTGAGGGGGGGGGGGGGGGGGGGGGGGGGGAGG
TTGGTTTGTCCCCGCCCCCGGGGGGGGGCCGCACCGCCGGGGTTTAAGGA
AAGGTATAAAGGGGAGGGGCGGGGGTTTNNNNNNNNNNGAGAAGGGGGGG
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG
GGGGGGGGGGGGGGGGGGGGGGGGGGGCGGGGGAGAAGTATGTCTTGTCC
TCGCTCCAGCGGTGGGCTCGCACGCACGTGATTCAAGTAAAGGTATATAG
GCGAGTCGCGCGTGTTTGTACCACAGCTGCTGCTATGCAATCCCATGAGC
CTGGGGTTTGTTACTGGTTCCGTGACTATTTGGAGCGGTTGGTTCGCGCT
CGGTTGTAGTTGTACATGCATACAGCTGACGTGTCATACCTATGCCACCT
CTTCGGCAGGAGGTGCTGACCATGAGCGCAACAGCGTGTCGAATCTCGCT
GTCGTGTGGTTGGTGGGCGGAAAAGCGGTCATGTCTTCGACTCTTGTGTC
CATTTGCTGCCCTGGCGCGAATCGCGTGTCTATATTAATATGGGTTCCTG
GTGTGGACGTTCGGCGTGGTGTGTATTTTTTCACAGGAGAAGAAGAAGGA
GGAGGTATCTCAGAACGGCGATGACTCTGTCAAGGAGAAGAAGGAGAAAA
AGAAGAAGGTGAGATGTCCGCTTCCTCCCTCCTCCGCTCATTTCGACGTC
TGCTACTGCTGCGCCGCCGCCGTCGATGCTCACGGATGATGGTCGCTGTT
GCGCCCACAACCTACTCAGCAGGTCTGAGTTTTTCTGCTCTCGTCCTGTG
TCGAGGCTCTCTCCCTTTCGGTGCTGCCAGGCGACGACGGCTGTACGTAC
GAAGTTTCTGTCATTCTGAATTGCCCGTCTGGTGAAAAGTTTATCCATGT
AGGTATCTATTCCGTGCCTCGTTCGTTTGGTGGTTTCGCGCTACGTATTT
TTATTCTGAACGTGTTTTTTTGCTGTCTTCCTCTTGCCGTTGCCCGCTGC
TTGCTCCTTTTTTCTCTCGCTGTCGTCGCCGACGCACCGCCTCCTTTCTG
GCTGGTTGACGGGTGTGCGGATGATGGATCGGTCGGTCGATGTTTGCCCG
ACGTGTTTGGATGGGTGCTCGTGCGATGCACTGCTGCTACGGACGTGCTT
GCGCCACTTGCCCCGCGGGATGCGCTGGCATGAGTAGGACAAGAAGAAGC
GGGACAAGGAGAACACCTCCGATGACGGCGAGACCAAGACCACAGTCGAG
TGAGTATCCACGTCCCACCGCCGCCGCCTCCCCAGGCTTGAGAGCGGTGG
CTAGGCTACTCTGTTCGAATCACATCATTTCGGATTCTTTAGTGGCGCTC
TTGTGTTTTGTGACGGTGCAAGTCGAGGTGTTTTTTTTTAAGGGTGGGTT
GGGGGAGCAGCATGCTGCACGTGCGACGTTCCTACGGCTGTGCGGTCCCG
TGCCGCCAGGTAGTGATGTCATCCCAATTATTTTTGGTAACCAAGGTCAG
TAGCAACGAACGTGTGGTCTGGCGTACTGCTGTGTACTCAGGAGGAAGAG
GCCCCTTGTTTCGTTTCATTGCCTAACTGTTGTCTCATTGCCCTGTTCTT
GCTGCTGCTGCTGCTGCTGCCTGCTGCTGCTGTGACAGCGAGTTCGGCGA
TGTGGTTGCCACGTCTGGAAGCCTGGAGGTGGAAGACGCCGTAGCCTTCG
ACGACTCCGTGGCCGCCATTCGCCGCCACCTCGACGACGGCACTTCCAAC
GAAAACATCTTCGAGGTACAGCATTGTGTTCGTGCATCTGTGCGATTTTT
TTTTTTTTTCAACATCTACCCGGCTACTACTGTAGCCGGCTGAAAAAATG
AAAATATGTCAATCTGTAGCGGGATGTGGGCGTGGGTGTGCTTCCGGAGT
TAGAATCGACCACGCGATAACCGGCTGACCAAATGAAAAGACGCATGTCT
CGTAGCGGGAAAATCAACGCGACACGCTTTCCCGCTGATTGGGCTCCCCC
GACAATTGTGTTTGGTGCGTTTGTTCGGTTAGCCTCGAGCGGATTATTCG
GTTATATTTTGAAAGGACGCCAGTCGTATGCATACAGCAAGCCAAAAAAG
CAACCGGGGTGTGCACCTCTTTTCATTGTTGGTTTCGATGCCACAGCGTT
TTTGTTTTGTAAATAAAACTGCAGTATTTTTTCTGCTTCTCCAGACTTTT
GACCCGAACCTCGCTTCCCTCCCCCCGCCCCCCCCAACCCCCGAGGCAGG
AAATCCGCACGGCCCAGACGTTCGCCGCGTTCCCCGTCCACTACCGCATC
CACCTGTTTGTGGCCGCCTCTTTCGCCACCGCCGACAAGGTGACAAAGGA
CGACATCGAGTCGCGGGCTGCCATGTTCGACATGCTCAAGTCTCGCCCTG
ACGACCAGAGGCACATCATCGGTGCCTTCGAGCTCCTGTGCCAG
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Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig1083:210..3353-

>mRNA_E-siliculosus-1a_F_contig1083.577.1 ID=mRNA_E-siliculosus-1a_F_contig1083.577.1|Name=mRNA_E-siliculosus-1a_F_contig1083.577.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=1524bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1083:210..3353- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
ACCCGCTACAACGAGGAGGACGAGCGCGCTATCGTGAACGGTGCGCACAC
GAACGCCACCCTCCAGCAGCTGGTGCACAAATACGTGGAGCTCTTCGTCC
TCTGCCCCAACTGCCGCCTCCCCGAGTCGAACCCGCTACAACGAGGAGGA
CGAGCGCGCTATCGTGAACGGTGCGCACACGAACGCCACCCTCCAGCAGC
TGGTGCACAAATACGTGGAGCTCTTCGTCCTCTGCCCCAACTGCCGCCTC
CCCGAGTCGAAGTACAAGATCAAGAACGGCGCGATCTTCCACAAGTGCTA
CGCCTGCGGGGCCAAGGAGATGGTGGACATGTCTCACAAGCTCTGCACGT
ACATCGTCAACACCGCAAAGAAGGCCAAGAAGGGCAAGGATAAGGACGCG
GCCAAGGACTCGAAGGAGAGGAAGCGCGAGAAGAAGAGTACAAGATCAAG
AACGGCGCGATCTTCCACAAGTGCTACGCCTGCGGGGCCAAGGAGATGGT
GGACATGTCTCACAAGCTCTGCACGTACATCGTCAACACCGCAAAGAAGG
CCAAGAAGGGCAAGGATAAGGACGCGGCCAAGGACTCGAAGGAGAGGAAG
CGCGAGAAGAAGGAGAAGAAGAAGGAGGAGGTATCTCAGAACGGCGATGA
CTCTGTCAAGGAGAAGAAGGAGAAAAAGAAGAAGGAGAAGAAGAAGGAGG
AGGTATCTCAGAACGGCGATGACTCTGTCAAGGAGAAGAAGGAGAAAAAG
AAGAAGGACAAGAAGAAGCGGGACAAGGAGAACACCTCCGATGACGGCGA
GACCAAGACCACAGTCGAGACAAGAAGAAGCGGGACAAGGAGAACACCTC
CGATGACGGCGAGACCAAGACCACAGTCGACGAGTTCGGCGATGTGGTTG
CCACGTCTGGAAGCCTGGAGGTGGAAGACGCCGTAGCCTTCGACGACTCC
GTGGCCGCCATTCGCCGCCACCTCGACGACGGCACTTCCAACGAAAACAT
CTTCGAGCGAGTTCGGCGATGTGGTTGCCACGTCTGGAAGCCTGGAGGTG
GAAGACGCCGTAGCCTTCGACGACTCCGTGGCCGCCATTCGCCGCCACCT
CGACGACGGCACTTCCAACGAAAACATCTTCGAGGAAATCCGCACGGCCC
AGACGTTCGCCGCGTTCCCCGTCCACTACCGCATCCACCTGTTTGTGGCC
GCCTCTTTCGCCACCGCCGACAAGGTGACAAAGGACGACATCGAGTCGCG
GGCTGCCATGTTCGACATGCTCAAGTCTCGCCCTGACGACCAGAGGCACA
TCATCGGTGCCTTCGAGCTCCTGTGCCAGGAAATCCGCACGGCCCAGACG
TTCGCCGCGTTCCCCGTCCACTACCGCATCCACCTGTTTGTGGCCGCCTC
TTTCGCCACCGCCGACAAGGTGACAAAGGACGACATCGAGTCGCGGGCTG
CCATGTTCGACATGCTCAAGTCTCGCCCTGACGACCAGAGGCACATCATC
GGTGCCTTCGAGCTCCTGTGCCAG
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