mRNA_E-siliculosus-1a_F_contig108.559.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig108.559.1 vs. uniprot
Match: A0A6H5KTH2_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KTH2_9PHAE) HSP 1 Score: 413 bits (1062), Expect = 1.990e-137 Identity = 212/226 (93.81%), Postives = 217/226 (96.02%), Query Frame = 1
Query: 406 MVEIDPCRIKMLPPGEATKDGDGLWWWNAVREAGPATAVTSGDLDKDEAQAANTSRTPGDGLETATNAVAGTRRRAKNGMNTYGMEMSEFYAAARQAVACGARVLLGDRDFQETKRRVSDADRADQEEAMSALGDSSAGKKITVEARIKRRVLEGTSPALWRKLRDLEKTWKPRKFAVLVTERDEVMASNLLKLEEGHGTVAVVGAHHTIGIGGILKANGWKTRRR 1083
MVEIDPCRIKMLPPGEATKDGDGLWWW+AV+EAGPATAV+SGD DKDE QAANTSRTPGDGLETATNAVA TRRRAKN MNT GMEMSEFYAAARQAVACGARVLLGDRDFQET RRVSDADRADQEEAMS+LGDSSAGKK TVE RIKRRVLEGTSPALWRKLRDLEKTWKPRKFAVLVTERDEVMASNLLK+EEG GTVAVVGAHHTIGIGGILKANGWKTRRR
Sbjct: 1 MVEIDPCRIKMLPPGEATKDGDGLWWWDAVQEAGPATAVSSGDRDKDEVQAANTSRTPGDGLETATNAVARTRRRAKNDMNTDGMEMSEFYAAARQAVACGARVLLGDRDFQETTRRVSDADRADQEEAMSSLGDSSAGKKNTVEPRIKRRVLEGTSPALWRKLRDLEKTWKPRKFAVLVTERDEVMASNLLKVEEGQGTVAVVGAHHTIGIGGILKANGWKTRRR 226
BLAST of mRNA_E-siliculosus-1a_F_contig108.559.1 vs. uniprot
Match: D7FHB7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHB7_ECTSI) HSP 1 Score: 142 bits (358), Expect = 6.450e-34 Identity = 109/298 (36.58%), Postives = 150/298 (50.34%), Query Frame = 1
Query: 232 SRRVGSERPPEFQSDDDVFYFHDPNTSSKIWLVGTTHNTKASSKLVKKVVRRVKPKVVMVEIDPCRIKMLPPGEATKDGDGLWWWNAVREAGPATA---VTSGDLDKDEAQAANTSRTPGDGLETATNAVAGTRRRAKNGMNTYGM--------EMSEFYAAARQAVACGARVLLGDRDFQETKRRVSDA--------DRADQEEAMSALGDSSAGKKITVEARIKRRVLEGTSPALWRKLRDLEKTWKPRKFAVLVTERDEVMASNLLKLEEGHGTVAVVGAHHTIGIGGILKANGW 1068
S SE P F S+D V Y +P+T S+IWLVG H + S +L K VVR +P+VVM+E+D R+ LPPGEA K DGL W+ ++ A A G D E + + P + ++ RAK+ + E+SE A +A ACGARVLLGDRDF+ETKRR+ A +R D EA+ S + +K +++ T+ + ++ L R +V ERDEVMASNL+ ++ TVA+VG H GI ILK NGW
Sbjct: 17 SANARSEAVPAFTSNDGVSYLRNPDTGSEIWLVGVVHGQETSVELSKSVVRTTRPQVVMLELDSKRLDDLPPGEAQKAEDGLTWFMPEKQPDDAVAQYVTLEGGGDDVELSRGDRWKGPFSFMSSS---------RAKSFVGAIKAMVDVFEEEEVSEMEVAVLEAQACGARVLLGDRDFEETKRRLVAAGLADTVGDERLDDPEALLNDSMSVSNRKKFAGLDLRKPETRETAGEHYAAMKRLS---NQRALEAMVPERDEVMASNLMTIKGKPITVALVGLFHVDGIERILKRNGW 302
BLAST of mRNA_E-siliculosus-1a_F_contig108.559.1 vs. uniprot
Match: A0A6H5KLL9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLL9_9PHAE) HSP 1 Score: 143 bits (361), Expect = 2.000e-33 Identity = 111/294 (37.76%), Postives = 150/294 (51.02%), Query Frame = 1
Query: 223 HATSRRVGSERPPEFQSDDDVFYFHDPNTSSKIWLVGTTHNTKASSKLVKKVVRRVKPKVVMVEIDPCRIKMLPPGEATKDGDGLWWWNAVREAGPATAVTSGDLDK---DEAQAANTSRTPGDGLETATNAVAGTRRRAKNGMNTYGME-MSEFYAAARQAVACGARVLLGDRDFQETKRRVSDA--------DRADQEEAMSALGDSSAGKKITVEARIKRRVLEGTSPALWRKLRDLEKTWKPRKFAVLVTERDEVMASNLLKLEEGHGTVAVVGAHHTIGIGGILKANGW 1068
H SE P F S+D V Y +P+T S+IWLVG H + S +L K VVR +P+VVM+E+D R+ LPPGEA K DGL W+ ++ P AV G + D+ + G +++ V K ++ + E +SE A +A ACGARVLLGDRDF+ETKRR+ A +R D EA+ L DS + A + R + T A +++ R +V ERDEVMA NL+ L+ TVA+VG H GI ILK NGW
Sbjct: 110 HHVPANTPSEAIPAFASNDGVSYLRNPDTGSEIWLVGVVHGQETSVELSKSVVRTTRPQVVMLELDSSRLDDLPPGEAQKAEDGLTWFMPQKQ--PDNAVAQGVTSRGGGDDVDLPRGEKWKGPFAFMSSSRVKSFVGAMKAIIDVFEEEEVSEMEVAVLEAQACGARVLLGDRDFEETKRRLVAAGLADTVGDERLDDPEAL--LNDSMSVSNRKTFAGLDLRKPD-TREAAGEHYAAMKRLSNQRALEAMVPERDEVMARNLMTLKGKPITVALVGLFHVDGIERILKRNGW 398
BLAST of mRNA_E-siliculosus-1a_F_contig108.559.1 vs. uniprot
Match: A0A6H5K4M4_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K4M4_9PHAE) HSP 1 Score: 128 bits (321), Expect = 3.280e-28 Identity = 110/307 (35.83%), Postives = 156/307 (50.81%), Query Frame = 1
Query: 208 ACTAQHATSRRVGSERPPEFQSDDDVFYFHDPNTSSKIWLVGTTHNTKASSKLVKKVVRRVKPKVVMVEIDPCRI----KMLPPGEAT-KDGDGLWWWNAVREAGPATAVTSGDLDKDEAQAANTSRTPGDGLETATNAVAGTRRRAK--NGMNTYGMEMS-EFYAAARQAVACGARVLLGDRDFQETKRRVSDADRADQEEAMSALGDSSAGKKITVEARIKRRVLEGTSPAL--------WRKLRDLEKTWKPRKFAVLVTERDEVMASNLLKLEEGHGTVAVVGAHHTIGIGGILKANGWKTRR 1080
A A A RR G++R P F DD V Y ++P S++WLVGT H + +S+ LV+ V+R++KP+VVMVE+D R+ K GE T DG G +E P T + + P + T A A + +K M+ G+ EF A +A ACGA++LLGDRD + T RR+S+A R + +S G G + +EA + +E + +L RK+ K P + ++ ERD+VMA NL+ L+ TVAVVG H GI GIL ANGWK +R
Sbjct: 100 AAAAGTAVGRRPGAKRSPTFLCDDAVSYLYNPTKQSEVWLVGTAHISNSSATLVENVIRQIKPQVVMVELDAQRVGSFMKPSKQGEKTLADGTG-------KEIAPPAERTRNPFFGAFFKQLLDPKVPVNDRITDFFAAALGKAISKMYESMDQKGLSSGQEFTIAINEARACGAKLLLGDRDVRITLRRLSEALRKIDLQKISQSGQMETG--LGLEA-LDGSSVESINSSLDILKNRETMRKVIGFYKEEAPELYNAMIGERDKVMAVNLMGLDGKQVTVAVVGLAHVDGIEGILMANGWKCQR 396
BLAST of mRNA_E-siliculosus-1a_F_contig108.559.1 vs. uniprot
Match: D7FHB5_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FHB5_ECTSI) HSP 1 Score: 122 bits (305), Expect = 1.130e-26 Identity = 98/282 (34.75%), Postives = 127/282 (45.04%), Query Frame = 1
Query: 250 ERPPEFQSDDDVFYFHDPNTSSKIWLVGTTHNTKASSKLVKKVVRRVKPKVVMVEIDPCRIKMLPPGEATKDGDGLWWWNAVREAGPATAVTSGDLDKD---EAQAANTSRTPGDGLETATNAVAGTRRRAKNGMNTYGMEMSEFYAAARQAVACGARVLLGDRDFQETKRRVSDADRADQEEAMSALGDSSAGKKITVEARIKRRVLEGTSPALWRKLRDLEKTWKPRK-FAVLVTERD-EVMASNLLKLEEGHGTVAVVGAHHTIGIGGILKANGWKTRR 1080
E PE S+D V Y+ P S IWLVG H K+ +LV++ + ++P+VVMVE+D RI +LPPGEA + +GLWWW E S D+D+D + A D E+ + M E A R+A ACGARVLLGDRD++ T R + A RAD A K RK F L T D EVMA NL+KL TVAV+G H G+ +LK +GW+ RR
Sbjct: 111 ETLPECISNDAVSYWVHPAKESHIWLVGVVHGAKSGVQLVEEAIGGIRPEVVMVELDADRICVLPPGEAMETRNGLWWWAPEEEP-----EGSADVDEDGXXXXEYAEDDXXXXDEEESVS-------------------PMIEIQTAVREAGACGARVLLGDRDYETTGRLLEKAKRADMASA------------------------------------------KERKEFNDLTTSFDCEVMAKNLMKLRGEQTTVAVIGMAHLDGVEKVLKGHGWQRRR 326
BLAST of mRNA_E-siliculosus-1a_F_contig108.559.1 vs. uniprot
Match: A0A6H5LN04_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LN04_9PHAE) HSP 1 Score: 101 bits (251), Expect = 1.240e-19 Identity = 65/181 (35.91%), Postives = 94/181 (51.93%), Query Frame = 1
Query: 247 SERPPEFQSDDDVFYFHDPNTSSKIWLVGTTHNTKASSKLVKKVVRRVKPKVVMVEIDPCRIKMLPPGEATKDGDGLWWWNAVREAGPATAVTSGDLDKDEAQAANTSRTPGDGLETATNAVAGTRRRAKNGMNTYGME---MSEFYAAARQAVACGARVLLGDRDFQETKRRVSDADRAD 780
+++ PE D V + +P+T S+IWL+G H + +LV+ V+R +KP+VVM+E+D R +LPPG + D LWWW + G R PG + A R+ +N N Y E +SE + A R+A AC ARVLLGDR + +KRR +A+RAD
Sbjct: 85 NDQLPECLQSDAVSHIRNPSTGSEIWLLGIIHQAEPYVQLVQSVIREIKPQVVMLELDAERTFLLPPGTPYQGEDKLWWWKPAKAKG---------------------RRPG---AVSNRKKAKPRKTTRNQRNFYQDEHVGVSEIWTAGREAQACRARVLLGDRSNEVSKRREREAERAD 241
BLAST of mRNA_E-siliculosus-1a_F_contig108.559.1 vs. uniprot
Match: A0A812NKF8_9DINO (Hypothetical protein n=1 Tax=Symbiodinium natans TaxID=878477 RepID=A0A812NKF8_9DINO) HSP 1 Score: 72.0 bits (175), Expect = 8.340e-10 Identity = 78/278 (28.06%), Postives = 116/278 (41.73%), Query Frame = 1
Query: 295 HDPNTSSKIWLVGTTHNTKASSKLVKKVVRRVKPKVVMVEIDPCRIKMLPPGEATKDGDGLWWWNAVREAGPATAVTSGDLDKDEAQAANTSRTPGDGLETATNAVAGTRRRAKNGMNTYGMEM--------------SEFYAAARQAVACGARVLLGDRDFQETKRRV------SDADRADQEEAMSA--LGDSSAGKKITVEARIKRRVLEGTSPALWRKLRDLEKTWKPRKFAVLVTERDEVMASNLLKLEEG--HGTVAVVGAHHTIGIGGILK 1056
H TS ++++G TH + S+++V+ VV++ P +VMVE+D R+ L A + A P P D +A A G+ +G++M +E AA +A GA V+LGDR Q+T R+ SD + +Q+ A+S L S G + V++ T A ++LR K P FA LV ERDE MA+NL + VAVVG+ H GI L+
Sbjct: 81 HLQGTSGDVFVLGVTHLSNKSAQVVRSVVQKASPDMVMVELDASRVAGLARNST----------RAAKAAAPEA--------------------PSDFFTSARKATTDAALGMAAGVLRFGLDMIYRAFEKYLNTPAGTEMLAAVEEAAKVGAPVMLGDRPAQDTLNRLVEAGQSSDLGQLEQDLAISVPELRTSDLGLQALVDS--------ATDQATAKRLRRAFKASAPELFAALVGERDEYMAANLARAARNGRRRIVAVVGSLHVQGISEALE 320
BLAST of mRNA_E-siliculosus-1a_F_contig108.559.1 vs. uniprot
Match: A0A812G1S0_9DINO (Hypothetical protein n=1 Tax=Symbiodinium sp. CCMP2592 TaxID=631055 RepID=A0A812G1S0_9DINO) HSP 1 Score: 69.3 bits (168), Expect = 5.830e-9 Identity = 79/278 (28.42%), Postives = 120/278 (43.17%), Query Frame = 1
Query: 295 HDPNTSSKIWLVGTTHNTKASSKLVKKVVRRVKPKVVMVEIDPCRIKMLPPGEATKDGDGLWWWNAVREAGPATAVTSGDLDKDEAQAANTSRTPGDGLETATNAVAGTRRRAKNGMNTYGMEM--------------SEFYAAARQAVACGARVLLGDRDFQETKRRVSDA----DRADQEEAMSA----LGDSSAGKKITVEARIKRRVLEGTSPALWRKLRDLEKTWKPRKFAVLVTERDEVMASNLLKLEEG--HGTVAVVGAHHTIGIGGILK 1056
H T+ ++++G TH + S+++V+ VV+R P +VMVE+D R+ + N+ R + TA + P D TA A A + G+ +G+++ SE AA +A G V+LGDR Q+T R+ +A D A EE ++ L S G + V++ T A ++LR K P FA LV ERDE MA+NL + + VAVVG+ H GI L+
Sbjct: 69 HLQGTTGDVFVLGVTHLSNKSAEVVRSVVQRATPDLVMVELDASRVGLAK--------------NSTRSS-KTTAPPPAEA-------------PSDFFSTARKASADAALQLAAGVLRFGLDLIYRAFEKYLNTPAGSEMLAAIEEAGKIGTPVMLGDRPAQDTLNRLVEAGQSSDLAQLEEDLAISVPELRTSGLGLQALVDS--------ATDQATAKRLRRAFKGSAPELFAALVGERDEYMAANLARAAQKGKRRIVAVVGSLHVQGISEALE 310 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig108.559.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90) Total hits: 8
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig108.559.1 >prot_E-siliculosus-1a_F_contig108.559.1 ID=prot_E-siliculosus-1a_F_contig108.559.1|Name=mRNA_E-siliculosus-1a_F_contig108.559.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=345bp MRHRHRVLCLYSALTFLPSSSFVPPRGARLLPSSASAPIFQDEPSCRVAIback to top mRNA from alignment at E-siliculosus-1a_F_contig108:50909..58447- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_F_contig108.559.1 ID=mRNA_E-siliculosus-1a_F_contig108.559.1|Name=mRNA_E-siliculosus-1a_F_contig108.559.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=7539bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig108:50909..58447- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig108:50909..58447- >mRNA_E-siliculosus-1a_F_contig108.559.1 ID=mRNA_E-siliculosus-1a_F_contig108.559.1|Name=mRNA_E-siliculosus-1a_F_contig108.559.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=2070bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig108:50909..58447- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top |