prot_E-siliculosus-1a_F_contig1079.551.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig1079.551.1
Unique Nameprot_E-siliculosus-1a_F_contig1079.551.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length91
Homology
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BLAST of mRNA_E-siliculosus-1a_F_contig1079.551.1 vs. uniprot
Match: D7FU66_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FU66_ECTSI)

HSP 1 Score: 103 bits (257), Expect = 3.830e-27
Identity = 65/84 (77.38%), Postives = 66/84 (78.57%), Query Frame = 0 
Query:    1 MRTSSDSSARDGDLAREEGRGSMGGSSRRRRRGSSARTLAAGLALTLAACSTPAYGPQGASFSRACGPDSVYTRTTTPGAETIL 84
            MRTSS  SARDG LAREEG GSMGGSSRRRRRGSSARTLAAGLALTLAACSTPAYG +           SVYTRTT P AETIL
Sbjct:    1 MRTSS-GSARDGGLAREEGTGSMGGSSRRRRRGSSARTLAAGLALTLAACSTPAYGSKAYHALERAAQASVYTRTTAPAAETIL 83
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BLAST of mRNA_E-siliculosus-1a_F_contig1079.551.1 vs. uniprot
Match: A0A6H5LE70_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LE70_9PHAE)

HSP 1 Score: 80.1 bits (196), Expect = 1.690e-16
Identity = 48/53 (90.57%), Postives = 48/53 (90.57%), Query Frame = 0 
Query:    4 SSDSSARDGDLAREEGRGSMGGSSRRRRRGSSARTLAAGLALTLAACSTPAYG 56
            SSDSSARDG LAREEGRGSMGGSSR    GSSARTLAAGLALTLAACSTPAYG
Sbjct:    3 SSDSSARDGGLAREEGRGSMGGSSRXXXXGSSARTLAAGLALTLAACSTPAYG 55
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1079.551.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FU66_ECTSI3.830e-2777.38Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5LE70_9PHAE1.690e-1690.57Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 38..56
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 57..90
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..37
NoneNo IPR availableTMHMMTMhelixcoord: 33..55

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig1079contigE-siliculosus-1a_F_contig1079:13625..14318 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig1079.551.1mRNA_E-siliculosus-1a_F_contig1079.551.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig1079 13625..14318 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig1079.551.1 ID=prot_E-siliculosus-1a_F_contig1079.551.1|Name=mRNA_E-siliculosus-1a_F_contig1079.551.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=91bp
MRTSSDSSARDGDLAREEGRGSMGGSSRRRRRGSSARTLAAGLALTLAAC
STPAYGPQGASFSRACGPDSVYTRTTTPGAETILVWSLSI*
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