mRNA_E-siliculosus-1a_F_contig10781.548.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-siliculosus-1a_F_contig10781.548.1
Unique NamemRNA_E-siliculosus-1a_F_contig10781.548.1
TypemRNA
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig10781.548.1 vs. uniprot
Match: D7G2I1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2I1_ECTSI)

HSP 1 Score: 689 bits (1778), Expect = 1.140e-243
Identity = 344/382 (90.05%), Postives = 354/382 (92.67%), Query Frame = 1
Query:    1 QVNTVLTVPMMRTWCKANGTTLFIAPAHDVYVGHQRPGAVAEVPPTDAPWPAGLRREIMSLDDGKTNDLPTSACLAIGAPVVLHKSPQFVLLGVCNNSDGIIRGIELDPREDYHTSTTGYSVVTLRYAPLRVFVYIKSADDAGLHLDGLQRGVIAVAPVERKFTIVGINKRKFTFKRRQIPLTAGCLSSVYRSQGQTMRKIILDIRRPPGHAMDCAAVYVALSRATGLDDLNLLFPVTLQDLNQPQNPDIIAVVKYLHRLDDATMELFL*DPGSFTPAYATLDDIGEAGPRPPKKQPRQPGRHGPGATRRVAHLIPNEYNNCFFNSALALALAAWDGQPLPDAAAGTPAAGSFFAVLHLLRDSMFDECALSPNIVVQAQQAR 1146
            +VNTVLTVPMMRTWCKA GTTLFIA AHDVYVGHQRPGA AEVPPTDAPWPAGLRREI SLDDGKTNDLPTSACLAIGAPVVLHKSPQFVLLGVCNNSDGIIRGIELDPRE Y +ST GYSVVTLRYAPLR+FVYIKSAD AGLHLDGLQRGVIAVAPVERKFTIVGINKRKFTFKRRQIPLTAGCLSSVYRSQGQTM KIILDIRRPPGHA+DCAAVYVALSRATGL DLNLLFPVTLQDLNQPQNPDI+A+V YLHRLD+ TM LFL DPGSFTPAYATLD I EAGPRPP KQP++ GRHGPGATRRVAHLIPNE NNCFFNSALALALAAWDGQPLPD  AGTPAAGSFFA L LLRDSMFDEC LSPNIV +  Q R
Sbjct:   57 KVNTVLTVPMMRTWCKAKGTTLFIAAAHDVYVGHQRPGATAEVPPTDAPWPAGLRREIKSLDDGKTNDLPTSACLAIGAPVVLHKSPQFVLLGVCNNSDGIIRGIELDPREGYASSTAGYSVVTLRYAPLRIFVYIKSADAAGLHLDGLQRGVIAVAPVERKFTIVGINKRKFTFKRRQIPLTAGCLSSVYRSQGQTMPKIILDIRRPPGHAVDCAAVYVALSRATGLGDLNLLFPVTLQDLNQPQNPDIVAIVNYLHRLDETTMVLFLKDPGSFTPAYATLDGIEEAGPRPPHKQPKRVGRHGPGATRRVAHLIPNEDNNCFFNSALALALAAWDGQPLPDTTAGTPAAGSFFAALQLLRDSMFDECDLSPNIVRKMAQVR 438          
BLAST of mRNA_E-siliculosus-1a_F_contig10781.548.1 vs. uniprot
Match: D7G3U9_ECTSI (ATP-dependent DNA helicase n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3U9_ECTSI)

HSP 1 Score: 687 bits (1772), Expect = 4.250e-223
Identity = 342/375 (91.20%), Postives = 351/375 (93.60%), Query Frame = 1
Query:    1 QVNTVLTVPMMRTWCKANGTTLFIAPAHDVYVGHQRPGAVAEVPPTDAPWPAGLRREIMSLDDGKTNDLPTSACLAIGAPVVLHKSPQFVLLGVCNNSDGIIRGIELDPREDYHTSTTGYSVVTLRYAPLRVFVYIKSADDAGLHLDGLQRGVIAVAPVERKFTIVGINKRKFTFKRRQIPLTAGCLSSVYRSQGQTMRKIILDIRRPPGHAMDCAAVYVALSRATGLDDLNLLFPVTLQDLNQPQNPDIIAVVKYLHRLDDATMELFL*DPGSFTPAYATLDDIGEAGPRPPKKQPRQPGRHGPGATRRVAHLIPNEYNNCFFNSALALALAAWDGQPLPDAAAGTPAAGSFFAVLHLLRDSMFDECALSPNIV 1125
            +VNTVLTVPMMRTWCKA GTTLFIA AHDVYVGHQRPGA AEVPPTDAPWPAGLRREI SLDDGKTNDLPTSACLAIGAPVVLHKSPQFVLLGVCNNSDGIIRGIELDPRE Y +ST GYSVVTLRYAPLR+FVYIKSAD AGLHLDGLQRGVIAVAPVERKFTIVGINKRKFTFKRRQIPLTAGCLSSVYRSQGQTM KIILDIRRPPGHA+DCAAVYVALSRATGL DLNLLFPVTLQDLNQPQNPDI+A+V YLHRLD+ TM LFL DPGSFTPAYATLD I EAGPRPP KQP++ GRHGPGATRRVAHLIPNE NNCFFNSALALALAAWDGQPLPD  AGTPAAGSFFA L LLRDSMFDEC LSPNIV
Sbjct: 1764 KVNTVLTVPMMRTWCKAKGTTLFIAAAHDVYVGHQRPGATAEVPPTDAPWPAGLRREIKSLDDGKTNDLPTSACLAIGAPVVLHKSPQFVLLGVCNNSDGIIRGIELDPREGYASSTAGYSVVTLRYAPLRIFVYIKSADAAGLHLDGLQRGVIAVAPVERKFTIVGINKRKFTFKRRQIPLTAGCLSSVYRSQGQTMPKIILDIRRPPGHAVDCAAVYVALSRATGLGDLNLLFPVTLQDLNQPQNPDIVAIVNYLHRLDETTMVLFLKDPGSFTPAYATLDGIEEAGPRPPHKQPKRVGRHGPGATRRVAHLIPNEDNNCFFNSALALALAAWDGQPLPDTTAGTPAAGSFFAALQLLRDSMFDECDLSPNIV 2138          
BLAST of mRNA_E-siliculosus-1a_F_contig10781.548.1 vs. uniprot
Match: A0A6H5K6P6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6P6_9PHAE)

HSP 1 Score: 447 bits (1151), Expect = 2.250e-150
Identity = 233/390 (59.74%), Postives = 275/390 (70.51%), Query Frame = 1
Query:  592 MRKIILDIRRPPGHAMDCAAVYVALSRATGLDDLNLLFPVTLQDLNQPQNPDIIAVVKYLHRLDDATMELFL*DPGSFTPAYATLDDIGEAGPRPPKKQPRQP-GRHGPGATRRVAHLIPNEYNNCFFNSALALALAAWDGQPLPDAAAGTPAAGSFFAVLHLLRDSMFDECALSPNIVVQAQQARQAIFSNTSLPGAGSQMGDVASVFEAIAARCPQEGSPIWPDNFNDQQNRVVRTRREFGLDWRYANSCPVSNHSNLDITPDQTAALRNATVITIPNGTATTFHHKVQEFFSSGQASDLSIPGTSLCPFCAAGLGQTLCDWTLLPWTDHTAPSRVFFRSPEVFRGLHGRPMSPSPTLSMGAAYSLVGVSYHIAIGG-SRKNHFVTQL 1755
            M KIILDIR PPG  MD AAVYVALSRAT LD LNLLFPVTL+DLNQP + DI+A++ YLHRLD  T+++FL D   FTPA A+LD   + GP P + Q R+  GRHGPGATRRVAHLI N  NNCFFNSALAL LAAWDGQ LP ++AGTPAAGSFF+ L LLRDSMFD  AL  +IV                                        GSP+WPD+  DQQ RV RTRR+FGLDWRYAN+C + NHS  ++TPDQ+A LR ATVITIPNG + TF   V +FF S   +DL+IPG SLCP+CA  + + +CDWTLLPWT +TAP R+FFRS  VFRGL GRPM+PS T +MGAAYSLVGVSY + +GG + +NHFV+Q+
Sbjct:    1 MPKIILDIRPPPGTGMDPAAVYVALSRATSLDALNLLFPVTLEDLNQPPDRDILAIINYLHRLDKETLKVFLQDASRFTPASASLDAATDEGPTPSRTQRRRTTGRHGPGATRRVAHLIANSNNNCFFNSALALGLAAWDGQQLPPSSAGTPAAGSFFSALQLLRDSMFDGSALPDHIV----------------------------------------GSPLWPDSVFDQQARVARTRRDFGLDWRYANNCTIGNHSAREVTPDQSARLRAATVITIPNGVSATFQDNVFDFFRSSAPTDLAIPGQSLCPYCADNVHRNMCDWTLLPWTSNTAPDRIFFRSSCVFRGLDGRPMAPSMTFTMGAAYSLVGVSYFLPLGGGTNRNHFVSQV 350          
BLAST of mRNA_E-siliculosus-1a_F_contig10781.548.1 vs. uniprot
Match: A0A6H5KPV6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPV6_9PHAE)

HSP 1 Score: 423 bits (1087), Expect = 1.420e-136
Identity = 227/430 (52.79%), Postives = 273/430 (63.49%), Query Frame = 1
Query:  628 GHAMDCAAVYVALSRATGLDDLNLLFPVTLQDLNQPQNPDIIAVVKYLHRLDDATMELFL*DPGSFTPAYATLDDIGEAGPRPPKKQPRQP-GRHGPGATRRVAHLIPNEYNNCFFNSALALALAAWDGQ---PLPDAAAGTPAAGSFFAVLHLLRDSMFDECALSPNIVVQAQQARQAIFSNTSLPGAGSQMGDVASVFEAIAARCPQEGSPIWPDNFNDQQNRVVRTRREFGLDWRYANSCPVSNHSNLDITPDQTAALRNATVITIPNGTATTFHHKVQEFFSSGQASDLSIPGTSLCPFCAAGLGQTLCDWTLLPWTDHTAPSRVFFRSPEVFRGLHGRPMSPSPTLSMGAAYSLVGVSYHIAIGGSRKNHFVTQLRVRGRWHKYDCLAGGAVLSSDAFDADWNSSSQCLLAYLKTSLCVATPPLY 1905
            G AMD AAVYVAL RAT L+ LNLLFPVTL+DLNQP + DI+A++ YLHRLD  T+++FL D   FTPA A+LD   + GP P + Q R+  GRHGPGATRRVAHLI N  NNCFFNSALAL LAAWDG    P P          + F    +LR S              A+QAR  I   T + GAG  MG+VA VFEAIA  CP++GSP+WPD+  DQQ RV RTRR+FGLDWRYAN+C + NHS  ++TPDQ+A LR ATVITIPNG + TF   V +FF S   +DL+IPG SLCP+CA  + + +CDWTLLPWT +TAP R+FFRS  VFRGL GR                                          WHKYDCL GG V SSDA+D+ W+ SS  +L YL++++CVATPP Y
Sbjct:  248 GTAMDPAAVYVALFRATILEALNLLFPVTLEDLNQPPDRDILAIINYLHRLDKETLKVFLQDASRFTPASASLDAATDEGPTPSRTQRRRTTGRHGPGATRRVAHLIANSNNNCFFNSALALGLAAWDGPSPCPPPVCLHNNLQPNASFFPPSILRQSA-------------ARQARHDILHGTPITGAGCDMGNVAGVFEAIARACPRQGSPLWPDSVFDQQARVARTRRDFGLDWRYANNCTIGNHSAREVTPDQSARLRAATVITIPNGVSATFQDNVFDFFRSSAPTDLAIPGQSLCPYCADNVHRNMCDWTLLPWTSNTAPDRIFFRSSCVFRGLCGR------------------------------------------WHKYDCLQGGIVTSSDAYDSGWHVSSVHMLVYLRSAICVATPPPY 622          
BLAST of mRNA_E-siliculosus-1a_F_contig10781.548.1 vs. uniprot
Match: A0A6H5KIB1_9PHAE (ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KIB1_9PHAE)

HSP 1 Score: 419 bits (1078), Expect = 1.820e-125
Identity = 248/512 (48.44%), Postives = 287/512 (56.05%), Query Frame = 1
Query:    1 QVNTVLTVPMMRTWCKANGTTLFIAPAHDVYVGHQRPGAVAEVPPTDAPWPAGLRREIMSLDDGKTNDLPTSACLAIGAPVVLHKSPQFVLLGVCNNSDGIIRGIELDPREDYHTSTT-GYSVVTLRYAPLRVFVYIKSADDAGLHLDGLQRGVIAVAPVERKFTIVGINKRKFTFKRRQIPLTAGCLSSVYRSQGQTMRKIILDIRRPPGHAMDCAAVYVALSRATGLDDLNLLFPVTLQDLNQPQNPDIIAVVKYLHRLDDATMELFL*DPGSFTPAYATLDDIGEAGPRPPKKQPRQP-GRHGPGATRRVAHLIPNEYNNCFFNSALALALAAWDGQPLPDAAAGTPAAGSFFAVLHLLRDSMFDECALSPNIVVQAQQARQAIFSNTSLPGAGSQMGDVASVFEAIAARCPQEGSPIWPDNFNDQQNRVVRTRREFGLDWRYANSCPVSNHSNLDITPDQTAALRNATVITIPNGTATTFHHKVQEFFSSGQASDLSIPGTSLCPFCA 1530
            +V+T+LT PMMR  C+A GT LF+A AHDVYV HQRPG   E P T+APWP GLR EI SLDD KT DLPT A LA+GAPVV+HK PQFVLLGVCNNSDGIIRGIELDPRED+    T GYSVV LRYAPLRVFVYIK+ADDAGLHL+GL RGV+A+APVE++FTI GI KRKF FKRRQ+P                                                                   DI+ ++ YLHRL   T++LF  D  +FTPA A+LD   + GP   ++Q R+  GRHGPGA RRVAHLI N  NNCFFNSALAL LAAWDGQ LP ++AGTPAAGSFF+ L LLRD MF+   L  +IV                           S F    AR                                             ++TPDQ+A LR ATVITIPNG + TF   V  FF +   +DL+IPG SL P CA
Sbjct: 2002 KVSTILTAPMMRALCQARGTPLFVARAHDVYVKHQRPGYAEEKPATNAPWPTGLREEINSLDDAKTKDLPTLAFLAVGAPVVVHKKPQFVLLGVCNNSDGIIRGIELDPREDFLLDPTPGYSVVNLRYAPLRVFVYIKTADDAGLHLEGLDRGVVAIAPVEKEFTIEGIGKRKFIFKRRQLP-------------------------------------------------------------------DILGIINYLHRLGKETLKLFPQDASTFTPASASLDAATDEGPTSSRRQRRRTTGRHGPGAARRVAHLIANSNNNCFFNSALALGLAAWDGQQLPPSSAGTPAAGSFFSALQLLRDCMFNGSTLPDHIV--------------------------ESSFNCFRAR---------------------------------------------EVTPDQSARLRGATVITIPNGVSATFQDNVFNFFRTSAPTDLAIPGQSLYPCCA 2375          
BLAST of mRNA_E-siliculosus-1a_F_contig10781.548.1 vs. uniprot
Match: A0A6H5K882_9PHAE (ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K882_9PHAE)

HSP 1 Score: 341 bits (874), Expect = 1.060e-98
Identity = 187/383 (48.83%), Postives = 244/383 (63.71%), Query Frame = 1
Query:    1 QVNTVLTVPMMRTWCKANGTTLFIAPAHDVYVGHQRPGAVAEVPPTDAPWPAGLRREIMSLDDGKTNDLPTSACLAIGAPVVLHKSPQFVLLGVCNNSDGIIRGIELDPREDYHTSTTGYSVVTLRYAPLRVFVYIKSADDAGLHLDGLQRGVIAVAPVERKFTIVGINKRKFTFKRRQIPLTAGCLSSVYRSQGQTMRKIILDIRRPPGHAMDCAAVYVALSRATGLDDLNLLFPVTLQDLNQPQNPDIIAVVKYLHRLDDATMELFL*DPGSFTPAYATLD-----DIGEAGPRPPKKQPRQPGRHGPGATRR----VAHLIPNEYNNCFFNSALALALAAWDGQPLPDAAAGTPAAGSFFAVLHLLRDSMFDECALSPNI 1122
            +V T LT+P MRTWC++ GTTLFI+ A D +VG +  G   E P   A WP  LR E+ SLDD KT DLP   CLA+G P+V+HKSPQ VLLGVC+N DGI+R IELD RE       GY VV L++ P+RVFV+I+S DD+GL L G  RGV+A  P+ER   + G N R FT KRRQ+PLT+GCLSSV         ++ILD+R+PPG  +D A++YVA SRA  L+D  LLFPVTL DL++P++ D++A++  L RL   T+  F  DP +F P+  +L      D GE          R  G  G GA+RR     AHL+PN  NNCFFNSA+AL LA +DG   P+ +  TPAA +F   + L++D+M     +  +I
Sbjct: 1251 KVTTALTMPTMRTWCQSRGTTLFISSATDEFVGDEGGGRPKETPQAGAAWPPCLRNEVNSLDDTKTKDLPRQLCLAVGVPIVVHKSPQHVLLGVCSNRDGIVRAIELDQREQIQNHDGGYRVVHLKHLPVRVFVHIESMDDSGLKLPGFPRGVVAFGPIERNVVLTGKNGRNFTIKRRQLPLTSGCLSSV---------RVILDLRKPPGPRVDPASLYVARSRAKSLNDTYLLFPVTLNDLSRPRDADVVALIDCLRRLAKDTLNAFTSDPSTFIPSATSLPTDSDYDSGE------NDGGRGSGWLG-GASRRRQLQPAHLMPNSANNCFFNSAIALCLAVFDGHTPPNFSDCTPAATAFCPAIRLVKDNMLSGAPMPEHI 1617          
BLAST of mRNA_E-siliculosus-1a_F_contig10781.548.1 vs. uniprot
Match: A0A6H5JN07_9PHAE (ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JN07_9PHAE)

HSP 1 Score: 338 bits (866), Expect = 2.520e-97
Identity = 198/386 (51.30%), Postives = 249/386 (64.51%), Query Frame = 1
Query:    1 QVNTVLTVPMMRTWCKANGTTLFIAPAHDVYVGHQRPGAVAEVPPTDAPWPAGLRREIMSLDDGKTNDLPTSACLAIGAPVVLHKSPQFVLLGVCNNSDGIIRGIELDPREDYHTSTTGYSVVTLRYAPLRVFVYIKSADDAGLHLDGLQRGVIAVAPVERKFTIVGIN-KRKFTFKRRQIPLTAGCLSSV-------------YRSQGQTMRKIILDIRRPPGHAMDCAAVYVALSRATGLDDLNLLFPVTLQDLNQPQNPDIIAVVKYLHRLDDATMELFL*DPGSFTPAYATLDDIGEAGPRPPKKQP------RQPGRHGPGATRRVAHLIPNEYNNCFFNSALALALAAWDGQPLPDAAAGTPAAGSFFAVLHLLRDSMFD 1098
            +VNTVLTVPMMRTWCKAN T LFIAPA D +VG +RPG               LR EI SLDD KTNDLPT ACLAIGAPVVLHK PQFV+LGVCNNSDGIIRGIE+  RE+                   VFVYI++A DAGL L  L RGV +V PVER F+IV    KRKFTF R+Q+PLTAGCLS++               S   ++R+IILD+++PP   +D A+ Y+ALSRAT L+DL LLFPVTL+DL++P+N D++A++++LHRL++ T  L   D  +FT   A+L   G+A                +PGRH P +T  +A LI N+ NN F NSA+AL LAA+DG   PD    TPA  +FF  + L++D+MF+
Sbjct: 1663 RVNTVLTVPMMRTWCKANITPLFIAPAMDSFVGDERPG---------------LRDEISSLDDAKTNDLPTLACLAIGAPVVLHKQPQFVILGVCNNSDGIIRGIEITQREE-------------------VFVYIQTAYDAGLKLPDLCRGVTSVGPVERNFSIVITKTKRKFTFSRKQVPLTAGCLSALGSDYIASSCLYHPILSHCVSLRRIILDLQKPPQPLVDPASSYLALSRATYLEDLYLLFPVTLEDLSRPRNKDVVALIEFLHRLEETTSLLSHPDRSTFTLTSASLSSDGDAIDGEDNTSTGRTRGGSRPGRHLPASTPSIARLIANKNNNYFLNSAMALTLAAFDGLSPPDGRDCTPAGAAFFPAIKLIQDTMFN 2014          
BLAST of mRNA_E-siliculosus-1a_F_contig10781.548.1 vs. uniprot
Match: A0A6H5KXW4_9PHAE (ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXW4_9PHAE)

HSP 1 Score: 257 bits (656), Expect = 5.440e-72
Identity = 129/171 (75.44%), Postives = 143/171 (83.63%), Query Frame = 1
Query:  130 PPTDAPWPAGLRREIMSLDDGKTNDLPTSACLAIGAPVVLHKSPQFVLLGVCNNSDGIIRGIELDPREDYHTSTT-GYSVVTLRYAPLRVFVYIKSADDAGLHLDGLQRGVIAVAPVERKFTIVGINKRKFTFKRRQIPLTAGCLSSVYRSQGQTMRKIILDIRRPPGHAM 639
            P T+APWP GLR EI SLDD  T DLPT A LA+GAPVV+HK PQFVLLGVCNNSDGIIRGIELDP ED+    T GYSVV LRYAPL+VFVYIK+ADDAGLHL+GL RGV+A+APVE++ TI GI K KF FKRRQ+PL AGC+SSV+RSQGQTM KIILDI  PPG AM
Sbjct:  579 PATNAPWPTGLREEINSLDDANTKDLPTLAFLAVGAPVVVHKRPQFVLLGVCNNSDGIIRGIELDPLEDFLLDPTPGYSVVNLRYAPLQVFVYIKTADDAGLHLEGLDRGVVAIAPVEKECTIEGIGKGKFIFKRRQLPLPAGCVSSVFRSQGQTMPKIILDIHPPPGTAM 749          
BLAST of mRNA_E-siliculosus-1a_F_contig10781.548.1 vs. uniprot
Match: A0A6H5JCW5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCW5_9PHAE)

HSP 1 Score: 239 bits (609), Expect = 5.540e-71
Identity = 136/279 (48.75%), Postives = 169/279 (60.57%), Query Frame = 1
Query:  112 GAVAEVPPTDAPWPAGLRREIMSLDDGKTNDLPTSACLAIGAPVVLHKSPQFVLLGVCNNSDGIIRGIELDPREDYHT-STTGYSVVTLRYAPLRVFVYIKSADDAGLHLDGLQRGVIAVAPVERKFTIVGINKRKFTFKRRQIPLTAGCLSSVYRSQGQTMRKIILDIRRPPGHAMDCAAVYVALSRATGLDDLNLLFPVTLQDLNQPQNPDIIAVVKYLHRLDDATMELFL*DPGSFTPAYATLDDIGEAGPRPPKKQPRQPG--RHGPGATRRVAH 939
            G     P   A W   LR E+ ++D+   +DLPT ACLA+GA VV+HKSPQFVLLGVCNNSDG+I  IELD RE+YH  S  G+SVV LRY P+R              LDGL RGV+A APVE+ F++VG+ KRKFT +RRQ+  TAG                               +VYVALSR   L+DL LLFP TL+D N+P+N D++A+  YL RL+ AT+  FL DP  FTPA A+L  + + GPRP  KQ +  G  RHG GATRR A+
Sbjct:   10 GGPRRTPANCAKWSPALRDEVNAIDNASADDLPTVACLAVGAAVVIHKSPQFVLLGVCNNSDGVIDSIELDQREEYHVHSNPGHSVVYLRYTPVR--------------LDGLPRGVVAFAPVEKPFSVVGVGKRKFTIQRRQLLPTAG-------------------------------SVYVALSRVACLEDLYLLFPATLEDPNKPRNKDVVALTDYLQRLEKATLADFLQDPTRFTPASASLAHLPDVGPRPMAKQQQVKGANRHGHGATRRTAY 243          
BLAST of mRNA_E-siliculosus-1a_F_contig10781.548.1 vs. uniprot
Match: A0A6H5JJZ6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJZ6_9PHAE)

HSP 1 Score: 184 bits (468), Expect = 1.590e-51
Identity = 91/111 (81.98%), Postives = 97/111 (87.39%), Query Frame = 1
Query:  793 MELFL*DPGSFTPAYATLDDIGEAGPRPPKKQPRQPGRHGPGATRRVAHLIPNEYNNCFFNSALALALAAWDGQPLPDAAAGTPAAGSFFAVLHLLRDSMFDECALSPNIV 1125
            MELFL  PGSF PAYA+L+DIGEA PRPP KQP++ GRHGPGATRR+ HLIPNE NNCFFNSALALALAAWDGQPLP A AGTPAAGSFFA L LLRDSMF+ C LSPNIV
Sbjct:    1 MELFLIHPGSFAPAYASLNDIGEAVPRPPNKQPKRTGRHGPGATRRITHLIPNENNNCFFNSALALALAAWDGQPLPHAPAGTPAAGSFFAALQLLRDSMFNGCDLSPNIV 111          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig10781.548.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G2I1_ECTSI1.140e-24390.05Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7G3U9_ECTSI4.250e-22391.20ATP-dependent DNA helicase n=2 Tax=Ectocarpus sili... [more]
A0A6H5K6P6_9PHAE2.250e-15059.74Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KPV6_9PHAE1.420e-13652.79Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KIB1_9PHAE1.820e-12548.44ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. ... [more]
A0A6H5K882_9PHAE1.060e-9848.83ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. ... [more]
A0A6H5JN07_9PHAE2.520e-9751.30ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. ... [more]
A0A6H5KXW4_9PHAE5.440e-7275.44ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. ... [more]
A0A6H5JCW5_9PHAE5.540e-7148.75Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JJZ6_9PHAE1.590e-5181.98Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig10781contigE-siliculosus-1a_F_contig10781:2..2253 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-19
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Properties
Property NameValue
Start1
Stop1
Cds size783
Model size1920
Exons3
Hectar predicted targeting categoryother localisation
EggNOG OGsCOG0507@1,KOG0987@2759
BRITEko00000,ko01000,ko03029,ko03032,ko04131
Best eggNOG OGNA|NA|NA
Best tax levelEukaryota
COG Functional cat.L
EC3.6.4.12
EggNOG free text desc.G-quadruplex DNA unwinding
KEGG koko:K15255,ko:K20647
Seed eggNOG ortholog2880.D7G3U9
Seed ortholog evalue3.7e-137
Seed ortholog score494.2
Taxonomic scopeEukaryota
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig10781.548.1prot_E-siliculosus-1a_F_contig10781.548.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalepolypeptideE-siliculosus-1a_F_contig10781 1333..2226 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927579.5687885-UTR-E-siliculosus-1a_F_contig10781:1..7961622927579.5687885-UTR-E-siliculosus-1a_F_contig10781:1..796Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig10781 2..796 -
1696318595.2757714-UTR-E-siliculosus-1a_F_contig10781:1..7961696318595.2757714-UTR-E-siliculosus-1a_F_contig10781:1..796Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig10781 2..796 -
1622927579.581935-UTR-E-siliculosus-1a_F_contig10781:1017..13321622927579.581935-UTR-E-siliculosus-1a_F_contig10781:1017..1332Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig10781 1018..1332 -
1696318595.2878797-UTR-E-siliculosus-1a_F_contig10781:1017..13321696318595.2878797-UTR-E-siliculosus-1a_F_contig10781:1017..1332Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig10781 1018..1332 -
1622927579.6227283-UTR-E-siliculosus-1a_F_contig10781:2226..22531622927579.6227283-UTR-E-siliculosus-1a_F_contig10781:2226..2253Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig10781 2227..2253 -
1696318595.3252633-UTR-E-siliculosus-1a_F_contig10781:2226..22531696318595.3252633-UTR-E-siliculosus-1a_F_contig10781:2226..2253Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig10781 2227..2253 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927579.5942838-CDS-E-siliculosus-1a_F_contig10781:1332..20161622927579.5942838-CDS-E-siliculosus-1a_F_contig10781:1332..2016Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig10781 1333..2016 -
1696318595.2992256-CDS-E-siliculosus-1a_F_contig10781:1332..20161696318595.2992256-CDS-E-siliculosus-1a_F_contig10781:1332..2016Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig10781 1333..2016 -
1622927579.6058877-CDS-E-siliculosus-1a_F_contig10781:2127..22261622927579.6058877-CDS-E-siliculosus-1a_F_contig10781:2127..2226Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig10781 2128..2226 -
1696318595.3149505-CDS-E-siliculosus-1a_F_contig10781:2127..22261696318595.3149505-CDS-E-siliculosus-1a_F_contig10781:2127..2226Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig10781 2128..2226 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-siliculosus-1a_F_contig10781.548.1

>prot_E-siliculosus-1a_F_contig10781.548.1 ID=prot_E-siliculosus-1a_F_contig10781.548.1|Name=mRNA_E-siliculosus-1a_F_contig10781.548.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=261bp
MMRTWCKANGTTLFIAPAHDVYVGHQRPGAVAEVPPTDAPWPAGLRREIM
SLDDGKTNDLPTSACLAIGAPVVLHKSPQFVLLGVCNNSDGIIRGIELDP
REDYHTSTTGYSVVTLRYAPLRVFVYIKSADDAGLHLDGLQRGVIAVAPV
ERKFTIVGINKRKFTFKRRQIPLTAGCLSSVYRSQGQTMRKIILDIRRPP
GHAMDCAAVYVALSRATGLDDLNLLFPVTLQDLNQPQNPDIIAVVKYLHR
LDDATMELFL*
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mRNA from alignment at E-siliculosus-1a_F_contig10781:2..2253-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-siliculosus-1a_F_contig10781.548.1 ID=mRNA_E-siliculosus-1a_F_contig10781.548.1|Name=mRNA_E-siliculosus-1a_F_contig10781.548.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=2252bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig10781:2..2253- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
CAGGTTAACACCGTCTTGACCGTGCCGATGATGCGGACCTGGTGCAAGGC CAACGGTACCACTCTCTTCATCGCGCCAGCCCATGACGTTTACGTCGGGC ACCAACGACCGGGCGCCGTCGCGGAGGTGAGAACATCACATTTACCTCAC CTCTTACCTTGCCCTGCGTTTCCAATCGTTCCAAATATAAGCTACACCCA TTGCTAAACGGCCTTTGCTACTTTCGTACTCGCACAGGTACCACCAACGG ACGCTCCATGGCCTGCAGGACTTCGTCGGGAAATAATGTCGCTCGACGAC GGCAAAACAAACGACCTCCCCACCAGCGCATGCCTTGCTATCGGTGCGCC AGTCGTGCTTCACAAAAGCCCACAGTTCGTCCTGCTCGGGGTGTGTAACA ACTCCGACGGCATCATCCGTGGCATTGAGCTTGACCCACGTGAGGACTAC CACACCAGTACCACAGGCTACTCCGTTGTCACCCTTCGCTACGCGCCACT CCGAGTCTTCGTTTACATCAAGTCTGCTGATGACGCCGGCCTGCACTTGG ATGGGTTGCAGAGAGGAGTTATTGCCGTCGCACCTGTCGAGCGTAAGTTC ACCATTGTGGGCATCAACAAACGGAAGTTCACCTTCAAACGGCGACAGAT ACCATTGACGGCGGGGTGCTTATCGTCGGTGTACCGCAGCCAGGGCCAGA CCATGCGAAAGATCATCCTCGACATTCGCCGCCCTCCGGGACATGCTATG GACTGCGCCGCCGTCTACGTTGCCCTTTCGCGTGCAACCGGTCTTGACGA TTTGAACCTTCTCTTCCCCGTCACCCTGCAAGATCTCAACCAGCCTCAAA ATCCGGACATCATCGCCGTCGTCAAATACCTGCACCGCCTGGACGACGCT ACTATGGAGCTTTTCCTCTAAGACCCGGGGTCTTTCACCCCTGCCTACGC CACCTTGGACGACATCGGAGAAGCCGGCCCACGGCCGCCCAAGAAACAAC CAAGACAACCCGGTCGCCACGGTCCAGGTGCAACCCGAAGAGTCGCCCAC CTCATCCCCAACGAGTACAACAATTGCTTCTTCAATTCCGCGCTCGCCTT GGCACTCGCGGCCTGGGATGGTCAGCCACTTCCAGATGCTGCAGCCGGCA CACCTGCCGCTGGGTCTTTCTTTGCGGTCTTGCACTTGCTGAGAGACTCC ATGTTCGACGAGTGCGCCCTGTCGCCGAATATTGTGGTGGGCGTTCCGTC TTGTTCGTCTCTTGCCTTCACTTACATCGCCAATTCCTGCCGCGTTTTCG CCTTGCATGGTTTCATCACCTTCCTTGCCCTCTCATGTTGCCCATCTTCT TGCCTCCCGTTCACCGTCCGTATTAAACGTCGTTTCCACGTGCTTACTTG CTCAACGCTCTAGTTTCCTCTTCTTCATGCTTCCATTTGCCGCCCACACC TCTTCAGGTTCAAGCGCAACAAGCACGACAAGCCATATTTTCCAATACGT CCCTGCCCGGGGCAGGCTCCCAGATGGGAGACGTCGCTAGTGTCTTTGAG GCAATAGCTGCTCGTTGTCCCCAGGAAGGATCACCAATTTGGCCAGACAA CTTCAACGATCAACAGAACCGGGTCGTGCGGACTCGTCGAGAATTTGGGC TTGATTGGCGGTACGCGAACTCATGTCCAGTGAGCAATCACTCCAACCTC GACATAACGCCCGATCAAACGGCGGCGTTGAGGAACGCCACCGTCATCAC CATCCCAAACGGCACCGCCACCACTTTCCATCACAAGGTACAGGAATTTT TCTCCTCTGGCCAGGCGTCGGATCTGTCCATTCCGGGAACGTCCCTATGC CCCTTCTGTGCAGCTGGACTAGGCCAGACACTGTGCGATTGGACTTTGCT ACCATGGACTGACCACACAGCACCTAGCAGGGTGTTCTTCCGCTCTCCTG AGGTATTCCGAGGGCTGCACGGTCGTCCCATGTCGCCATCGCCGACCCTG TCCATGGGGGCGGCATATTCCTTGGTAGGCGTATCTTACCATATTGCGAT CGGCGGATCACGGAAGAACCACTTCGTCACTCAACTGCGTGTCAGAGGGA GATGGCACAAGTACGACTGCCTGGCGGGAGGAGCCGTACTTTCTTCAGAC GCCTTCGACGCCGACTGGAACAGCTCGTCGCAGTGTTTGCTGGCGTACCT CAAGACTTCTTTGTGCGTCGCCACACCACCGCTTTACACGCGACACGAGC AA
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Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig10781:2..2253-

>mRNA_E-siliculosus-1a_F_contig10781.548.1 ID=mRNA_E-siliculosus-1a_F_contig10781.548.1|Name=mRNA_E-siliculosus-1a_F_contig10781.548.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=1566bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig10781:2..2253- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
ATGATGCGGACCTGGTGCAAGGCCAACGGTACCACTCTCTTCATCGCGCC
AGCCCATGACGTTTACGTCGGGCACCAACGACCGGGCGCCGTCGCGGAGA
TGATGCGGACCTGGTGCAAGGCCAACGGTACCACTCTCTTCATCGCGCCA
GCCCATGACGTTTACGTCGGGCACCAACGACCGGGCGCCGTCGCGGAGGT
ACCACCAACGGACGCTCCATGGCCTGCAGGACTTCGTCGGGAAATAATGT
CGCTCGACGACGGCAAAACAAACGACCTCCCCACCAGCGCATGCCTTGCT
ATCGGTGCGCCAGTCGTGCTTCACAAAAGCCCACAGTTCGTCCTGCTCGG
GGTGTGTAACAACTCCGACGGCATCATCCGTGGCATTGAGCTTGACCCAC
GTGAGGACTACCACACCAGTACCACAGGCTACTCCGTTGTCACCCTTCGC
TACGCGCCACTCCGAGTCTTCGTTTACATCAAGTCTGCTGATGACGCCGG
CCTGCACTTGGATGGGTTGCAGAGAGGAGTTATTGCCGTCGCACCTGTCG
AGCGTAAGTTCACCATTGTGGGCATCAACAAACGGAAGTTCACCTTCAAA
CGGCGACAGATACCATTGACGGCGGGGTGCTTATCGTCGGTGTACCGCAG
CCAGGGCCAGACCATGCGAAAGATCATCCTCGACATTCGCCGCCCTCCGG
GACATGCTATGGACTGCGCCGCCGTCTACGTTGCCCTTTCGCGTGCAACC
GGTCTTGACGATTTGAACCTTCTCTTCCCCGTCACCCTGCAAGATCTCAA
CCAGCCTCAAAATCCGGACATCATCGCCGTCGTCAAATACCTGCACCGCC
TGGACGACGCTACTATGGAGCTTTTCCTCTAAGTACCACCAACGGACGCT
CCATGGCCTGCAGGACTTCGTCGGGAAATAATGTCGCTCGACGACGGCAA
AACAAACGACCTCCCCACCAGCGCATGCCTTGCTATCGGTGCGCCAGTCG
TGCTTCACAAAAGCCCACAGTTCGTCCTGCTCGGGGTGTGTAACAACTCC
GACGGCATCATCCGTGGCATTGAGCTTGACCCACGTGAGGACTACCACAC
CAGTACCACAGGCTACTCCGTTGTCACCCTTCGCTACGCGCCACTCCGAG
TCTTCGTTTACATCAAGTCTGCTGATGACGCCGGCCTGCACTTGGATGGG
TTGCAGAGAGGAGTTATTGCCGTCGCACCTGTCGAGCGTAAGTTCACCAT
TGTGGGCATCAACAAACGGAAGTTCACCTTCAAACGGCGACAGATACCAT
TGACGGCGGGGTGCTTATCGTCGGTGTACCGCAGCCAGGGCCAGACCATG
CGAAAGATCATCCTCGACATTCGCCGCCCTCCGGGACATGCTATGGACTG
CGCCGCCGTCTACGTTGCCCTTTCGCGTGCAACCGGTCTTGACGATTTGA
ACCTTCTCTTCCCCGTCACCCTGCAAGATCTCAACCAGCCTCAAAATCCG
GACATCATCGCCGTCGTCAAATACCTGCACCGCCTGGACGACGCTACTAT
GGAGCTTTTCCTCTAA
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