Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1078.547.1 vs. uniprot
Match:
A0A6H5KKK8_9PHAE (ABC protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKK8_9PHAE)
HSP 1 Score: 845 bits (2182), Expect = 8.700e-286
Identity = 515/587 (87.73%), Postives = 519/587 (88.42%), Query Frame = 3
Query: 411 MAPNNFKTGAPAGGGAPPRSPSRWTSPAAPLPQQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGEVICEVKDLYYAIELPPTAXXXXXXXAPVAPALPPGKRRQTGYSFRGGALLKIFRKDKGAVARASAPAATRVESAAPAVSSVLREKKKRVLTQGVNCRFCAGDMVAVI------------------------------GASGAGKSTFLDLLAGKKKEGECAGQILLTQSGGXXXGIGSRWRRGGKGRGRPSVYVTQDDFHVAELTVRESLAFAVRLSMGGRERDRRARVEELLDVLGLRACAEVRVGNPLERGISGGEARRLSMGIGVAALESVRLLLLDEPTTGLDSSSAAEVMLLARKLASRRDRRVVVASVHQPSAEMFSLFDKVLVMVGGRQAFFGSASKAADILSRPELGIMPTPGQNSAEFILLAAKAVLQSSQQQQEGRASGRGARSPEPSYASSSIHSSASTSPQGLIGVDPSSLLGVGD--IGGGXXGSTMGGDYLYEDAEKGLFNEPPGGKPAAYGGKGGYAEEEGAEEGKEEGTTTLELLQRRPWGIGGWFEESSHAVG 2075
MAPNNFKTGAPAGGGAPPRSPSRWTS A XXXXXXXXXXXXXXXXXXXXXXXXXXXX EGEVICEVKDLYYAIELPPTA APVAPALPPGKRRQTGYSFRGGALLKIFRKDKGAVARASAPAATRVESAAP VSSVLREKKKRVLTQGVNCRFCAGDMVAVI GASGAGKSTFLDLLAGKKKEGECAGQILLTQSGGXXXGIG RWRRGGKG+GRPSVYVTQDDFHVAELTVRESLAFAVRLSMGGRERDRRARVEELLDVLGLRACA+VRVGNPLERGISGGEARRLSMGIGVAALESVRLLLLDEPTTGLDSSSAAEVMLLARKLASRRDRRVVVASVHQPSAEMFSLFDKVLVMVGGRQAFFGSASKAADILSRPELGIMPTPGQNSAEFILLAAKAVLQSSQQ+ GRAS RGARSPEPSYASSSIHSSASTSPQGLIGVDPSSLLGVGD XX STMGGDYLYEDAEKGLFNEPPGGKPAAYGGKGGYAEEEGAEEGKEEGTTTLELLQR+PWGIGGWFEESSHAVG
Sbjct: 1 MAPNNFKTGAPAGGGAPPRSPSRWTSSA--XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPSYDRLAEQQQQEGEVICEVKDLYYAIELPPTATAAAPPPAPVAPALPPGKRRQTGYSFRGGALLKIFRKDKGAVARASAPAATRVESAAP-VSSVLREKKKRVLTQGVNCRFCAGDMVAVIVSLSHAWRSAVGGRLGRRQAACMKTAAQQAGASGAGKSTFLDLLAGKKKEGECAGQILLTQSGGXXXGIG-RWRRGGKGQGRPSVYVTQDDFHVAELTVRESLAFAVRLSMGGRERDRRARVEELLDVLGLRACADVRVGNPLERGISGGEARRLSMGIGVAALESVRLLLLDEPTTGLDSSSAAEVMLLARKLASRRDRRVVVASVHQPSAEMFSLFDKVLVMVGGRQAFFGSASKAADILSRPELGIMPTPGQNSAEFILLAAKAVLQSSQQE-GGRASRRGARSPEPSYASSSIHSSASTSPQGLIGVDPSSLLGVGDGXXXXXXXXSTMGGDYLYEDAEKGLFNEPPGGKPAAYGGKGGYAEEEGAEEGKEEGTTTLELLQRQPWGIGGWFEESSHAVG 582
BLAST of mRNA_E-siliculosus-1a_F_contig1078.547.1 vs. uniprot
Match:
D8LSM2_ECTSI (ABC transporter domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSM2_ECTSI)
HSP 1 Score: 344 bits (882), Expect = 4.370e-111
Identity = 199/225 (88.44%), Postives = 201/225 (89.33%), Query Frame = 3
Query: 948 MVAVIGASGAGKSTFLDLLAGKKKEGECAGQILLTQSGGXXXGIG----SRWRRGGKGRGRPSVYVTQDDFHVAELTVRESLAFAVRLSMGGRERDRRARVEELLDVLGLRACAEVRVGNPLERGISGGEARRLSMGIGVAALESVRLLLLDEPTTGLDSSSAAEVMLLARKLASRRDRRVVVASVHQPSAEMFSLFDKV-----LVMVGGRQAFFGS-ASKAAD 1592
MVAVIGASGAGKSTFLDLLAGKKKEGECAGQILLTQSGGXXX RWRRGGKGRGRPSVYVTQDDFHVAELTVRESLAFAVRLSMGGRERDRRARVEELLDVLGLRACAEVRVGNPLERGISGGEARRLSMGIGVAALESVRLLLLDEPTTGLDSSSAAEVMLLARKLASRRDRRVVVASVHQPSAEMFSLFDKV + GRQ G A + AD
Sbjct: 1 MVAVIGASGAGKSTFLDLLAGKKKEGECAGQILLTQSGGXXXXXXXXXIGRWRRGGKGRGRPSVYVTQDDFHVAELTVRESLAFAVRLSMGGRERDRRARVEELLDVLGLRACAEVRVGNPLERGISGGEARRLSMGIGVAALESVRLLLLDEPTTGLDSSSAAEVMLLARKLASRRDRRVVVASVHQPSAEMFSLFDKVDARGARITKRGRQRPIGKQAGRGAD 225
BLAST of mRNA_E-siliculosus-1a_F_contig1078.547.1 vs. uniprot
Match:
D8LSM1_ECTSI (ABC transporter domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSM1_ECTSI)
HSP 1 Score: 303 bits (776), Expect = 3.060e-85
Identity = 164/178 (92.13%), Postives = 164/178 (92.13%), Query Frame = 3
Query: 1542 MVGGRQAFFGSASKAADILSRPELGIMPTPGQNSAEFILLAAKAVLQSSQQQQEGRASGRGARSPEPSYASSSIHSSASTSPQGLIGVDPSSLLGVGDIGGGXXGSTMGGDYLYEDAEKGLFNEPPGGKPAAYGGKGGYAEEEGAEEGKEEGTTTLELLQRRPWGIGGWFEESSHAVG 2075
MVGGRQAFFGSASKAADILSRPELGIMPTPGQNSAEFILLAAKAVLQSSQQ QEGRAS RGARSPEPSYASSSIHSSASTSPQGLIGVDPSSLLGVGD XX DY YEDAEKGLFNEPPGGKPAAYGGKGGYAEEEGAE GKEEGTTTLELLQRRPWGIGGWFEESSHAVG
Sbjct: 1 MVGGRQAFFGSASKAADILSRPELGIMPTPGQNSAEFILLAAKAVLQSSQQHQEGRASRRGARSPEPSYASSSIHSSASTSPQGLIGVDPSSLLGVGDGXXXXXXXXXXXDYFYEDAEKGLFNEPPGGKPAAYGGKGGYAEEEGAEXGKEEGTTTLELLQRRPWGIGGWFEESSHAVG 178
BLAST of mRNA_E-siliculosus-1a_F_contig1078.547.1 vs. uniprot
Match:
W7TLH8_9STRA (Abc transporter g family member 29 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TLH8_9STRA)
HSP 1 Score: 170 bits (430), Expect = 2.800e-40
Identity = 105/264 (39.77%), Postives = 156/264 (59.09%), Query Frame = 3
Query: 900 KRVLTQGVNCRFCAGDMVAVIGASGAGKSTFLDLLAGKKKEGECAGQILLTQSGGXXXGIGSRWRRGGKGRGRPSV--YVTQDDFHVAELTVRESLAFA--VRLSMGGRERDRRARVEELLDVLGLRACAEVRVGNPLERGISGGEARRLSMGIGVAALESVRLLLLDEPTTGLDSSSAAEVMLLARKLASRRDRRVVVASVHQPSAEMFSLFDKVLVMVGGRQAFFGSASKAADILSRPELGIMPTPGQNSAEFILLAAKAVL 1679
K+ L + + R G+M A++G SGAGK+T LD+LAG+K G G++ G G P + YVTQD+ H+ TVRE+L FA +R+ G R R V+++L +LGL + A+V VG+ L +GISGG+ARRL++G+ + L ++ LDEPTTGLDS+ + EVM R LA++ R V ++HQPS E+F+LFDK+++M G Q +FG+ +A S P L + G N AEF++ A+ +
Sbjct: 674 KKYLLRKASGRVNPGEMCALMGGSGAGKTTLLDVLAGRKTAGLIEGEVFFN---------------GKAGMPSPKLCSYVTQDNVHIGCFTVRETLHFAALLRIKEGVRPAQREKMVDDVLGMLGLDSVADVMVGDSLRKGISGGQARRLTIGVEIINLPG--MIFLDEPTTGLDSNISYEVMAAVRNLANQN--RTVCCTIHQPSIEVFALFDKLILMAKGEQVYFGATHEAVKYFSSPALDFAFSKGVNPAEFVMSASSGSI 918
BLAST of mRNA_E-siliculosus-1a_F_contig1078.547.1 vs. uniprot
Match:
W7TH06_9STRA (Atp-binding cassette superfamily n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TH06_9STRA)
HSP 1 Score: 167 bits (422), Expect = 2.300e-39
Identity = 112/265 (42.26%), Postives = 155/265 (58.49%), Query Frame = 3
Query: 891 EKKKRVLTQGVNCRFCAGDMVAVIGASGAGKSTFLDLLAGKKKEGECAGQILLTQSGGXXXGIGSRWRRGGKGRGRPSVYVTQDDFHVAELTVRESLAFA--VRLSMGGRERDRRARVEELLDVLGLRACAEVRVGNPLERGISGGEARRLSMGIGVAALESVRLLLLDEPTTGLDSSSAAEVMLLARKLASRRDRRVVVASVHQPSAEMFSLFDKVLVMVGGRQAFFGSASKAADILSRPELGIMPTPGQNSAEFILLAAKAVL 1679
++ R+L +GV+ G M A++G SGAGKST LDLLA +K G G+ + GG S+W YVTQD+ H++ TVRE+L FA +RL G RR R E+++ +LGL A+V VGN L +GISGG+ARRLS+G+ + L V L LDEPTTGLDS + EVM R +A+ R VV ++H PS ++ LFD +L++ GRQ +FGSA A S LG G+N A+F++ A + +L
Sbjct: 659 DRAARIL-KGVSGHVFPGQMCALMGGSGAGKSTLLDLLAHRKTGGFITGEYYI---GGQAEKPSSKW----------CSYVTQDNVHISLFTVRETLEFAALLRLKEGIPVEKRRERAEDVMKMLGLEDVADVPVGNALVKGISGGQARRLSIGVEIMHLPDV--LFLDEPTTGLDSQISHEVMSSVRNIANHN--RTVVCTIHSPSKAVYELFDSLLLLALGRQTYFGSAEAAPTYFSLLTLGWCMPIGKNPADFLMEANQGLL 905
BLAST of mRNA_E-siliculosus-1a_F_contig1078.547.1 vs. uniprot
Match:
A0A8J4FZ89_9CHLO (ABC transporter domain-containing protein n=1 Tax=Volvox reticuliferus TaxID=1737510 RepID=A0A8J4FZ89_9CHLO)
HSP 1 Score: 154 bits (388), Expect = 5.530e-37
Identity = 113/261 (43.30%), Postives = 154/261 (59.00%), Query Frame = 3
Query: 909 LTQGVNCRFCAGDMVAVIGASGAGKSTFLDLLAGKKKEGECAGQILLTQSGGXXXGIGSRWRRGGKGRGRPSVYVTQDDFHVAELTVRESLAFAVRLSMGGRE--RDRRARVEELLDVLGLRACAEVRVGNPLERGISGGEARRLSMGIGVAALESVRLLLLDEPTTGLDSSSAAEVMLLARKLASRRDRRVVVASVHQPSAEMFSLFDKVLVMVGGRQAFFGSASKAAD---------ILSRPELGIMPTPGQNSAEFIL 1658
L V+ F G M A++G SG+GK+T LDLLAG+K G G++L + G + R R G YV Q D + LTVRE L + L E +++A VE+LL L L +CA VR+G+P RGISGG+A+R + IG++ + R++ LDEPTTGLDS +A EVML +KLA R VVA+VH P+A FSLFD++L++VGGR +FG + A + S PE G+M PG NSAEF++
Sbjct: 61 LVNQVSAWFEPGLMSALMGPSGSGKTTLLDLLAGRKTIGRVEGELLFS---GIKPSLEYRRRYCG--------YVEQFDTLLPILTVREMLLYTAELKRPLSEPLENKKAEVEKLLTQLCLNSCANVRIGSPAARGISGGQAKRTN--IGISLVTDPRVIFLDEPTTGLDSYTANEVMLTVQKLA--RAGVTVVATVHSPTAFCFSLFDRLLMLVGGRTVYFGPQDQRAIDYFQSCKPFLESDPE-GLMG-PGHNSAEFLV 304
BLAST of mRNA_E-siliculosus-1a_F_contig1078.547.1 vs. uniprot
Match:
A0A1S8W532_9FUNG (ABC transporter domain-containing protein n=1 Tax=Batrachochytrium salamandrivorans TaxID=1357716 RepID=A0A1S8W532_9FUNG)
HSP 1 Score: 159 bits (402), Expect = 6.830e-37
Identity = 104/241 (43.15%), Postives = 145/241 (60.17%), Query Frame = 3
Query: 942 GDMVAVIGASGAGKSTFLDLLAGKKKEGECAGQILLTQSGGXXXGIGSRWRRGGKGRGRPSVYVTQDDFHVAELTVRESLAF--AVRLSMGGRERDRRARVEELLDVLGLRACAEVRVGNPLERGISGGEARRLSMGIGVAALESVRLLLLDEPTTGLDSSSAAEVMLLARKLASRRDRRVVVASVHQPSAEMFSLFDKVLVMVGGRQAFFGSASKAADILSRPELGIMPTPGQNSAEFIL 1658
G M+A+IG SGAGKSTFLD+LAGK K G G I + + R R S +V Q+D ++ +TVRE+L F A+RL RDR+ R+EE++D LGL R+G+ L RGISGGE RRLS IGV + + ++ LDEPT+GLDS +A +VM L S + +R V+ S+HQP +++F+LFD++L++ G FFG AAD L+ GI PG N A+ ++
Sbjct: 385 GSMLAIIGPSGAGKSTFLDILAGKAKTGTVKGTITVGND------LSRSTLR------RLSGFVDQEDVFISTMTVREALEFSAALRLPESLSARDRKHRIEEVMDELGLTHIQNTRIGDSLSRGISGGEKRRLS--IGVELVTNPAVIYLDEPTSGLDSYNAVQVMETLATL-SHKWKRTVIFSIHQPRSDVFALFDQILLLSKGTTVFFGRTDSAADYLAG--YGIPCPPGYNLADHLI 608
BLAST of mRNA_E-siliculosus-1a_F_contig1078.547.1 vs. uniprot
Match:
A0A0J0XT02_9TREE (p-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Cutaneotrichosporon oleaginosum TaxID=879819 RepID=A0A0J0XT02_9TREE)
HSP 1 Score: 155 bits (393), Expect = 1.440e-36
Identity = 97/251 (38.65%), Postives = 155/251 (61.75%), Query Frame = 3
Query: 909 LTQGVNCRFCAGDMVAVIGASGAGKSTFLDLLAGKKKEGECAGQILLTQSGGXXXGIGSRWRRGGKGRGRPSVYVTQDDFHVAELTVRESLAFAVRLSMGGRER-DRRARVEELLDVLGLRACAEVRVGNPLERGISGGEARRLSMGIGVAALESVRLLLLDEPTTGLDSSSAAEVMLLARKLASRRDRRVVVASVHQPSAEMFSLFDKVLVMVGGRQAFFGSASKAADILSRPELGIMPTPGQNSAEFIL 1658
L V+ + G M+A++G SGAGKST LD+++ +KK E G I L + + S +V QDD H LTVRE++ FA RL+ G+ R + R RV++++ LGL++CA +++G P++RGISGG+ RR+++G G+ R+L LDEPT+GLDS+SA EV+ R++A + + +V+A++H PS + LFD+++V+ GR AF G+ ++AA + ++G P QN A+ +L
Sbjct: 23 LVDNVSVKVAQGQMLAILGPSGAGKSTLLDIMSFRKKAME-GGSIRLNGTPLTATTMSE-----------VSSFVEQDDQHYGVLTVRETIGFASRLTNTGQTRAETRQRVDDIVHALGLQSCANLKIGTPIQRGISGGQKRRVTVGTGLVTYP--RILFLDEPTSGLDSASAREVVASIRRIA-QAEGIIVIATIHSPSVDTLQLFDQMMVLAKGRTAFRGTMAEAAARCT--DIGYPMPPFQNPADHLL 256
BLAST of mRNA_E-siliculosus-1a_F_contig1078.547.1 vs. uniprot
Match:
J5QPF8_TRIAS (ABC transporter domain-containing protein n=2 Tax=Trichosporon asahii var. asahii TaxID=189963 RepID=J5QPF8_TRIAS)
HSP 1 Score: 154 bits (390), Expect = 4.400e-36
Identity = 91/229 (39.74%), Postives = 141/229 (61.57%), Query Frame = 3
Query: 909 LTQGVNCRFCAGDMVAVIGASGAGKSTFLDLLAGKKKEGECAGQILLTQSGGXXXGIGSRWRRGGKGRGRPSVYVTQDDFHVAELTVRESLAFAVRLSMGGRERDR-RARVEELLDVLGLRACAEVRVGNPLERGISGGEARRLSMGIGVAALESVRLLLLDEPTTGLDSSSAAEVMLLARKLASRRDRRVVVASVHQPSAEMFSLFDKVLVMVGGRQAFFGSASKAAD 1592
L V+ G M+A++G SGAGKST LD+++ +KK + G I L + S YV QDD H+ LTVRE++ +A RL+ G + R RV++++ LGL++CA++++G P++RGISGG+ RR+++G G+ R+L LDEPT+GLDS+SA EVM +++A + +V+A++H PS E SLFDK++++ GR AF G+ +A D
Sbjct: 45 LVDNVSVTVKQGQMLAILGPSGAGKSTLLDVMSFRKKHMD-GGSITLNNQ-----------PLSAMTMAQVSSYVEQDDQHLGVLTVRETITYAARLTQSGMTKGEIRTRVDQIITDLGLQSCADLKIGTPIQRGISGGQRRRVTVGTGLVTFP--RVLFLDEPTSGLDSTSAREVMASIKRIA-EAEGIIVIATIHAPSIEALSLFDKMMILAQGRTAFLGTLQQAND 258
BLAST of mRNA_E-siliculosus-1a_F_contig1078.547.1 vs. uniprot
Match:
A0A427XLU8_9TREE (ABC transporter domain-containing protein n=1 Tax=Apiotrichum porosum TaxID=105984 RepID=A0A427XLU8_9TREE)
HSP 1 Score: 154 bits (389), Expect = 7.510e-36
Identity = 94/227 (41.41%), Postives = 141/227 (62.11%), Query Frame = 3
Query: 909 LTQGVNCRFCAGDMVAVIGASGAGKSTFLDLLAGKKKEGECAGQILLTQSGGXXXGIGSRWRRGGKGRGRPSVYVTQDDFHVAELTVRESLAFAVRLSMGGRERDR-RARVEELLDVLGLRACAEVRVGNPLERGISGGEARRLSMGIGVAALESVRLLLLDEPTTGLDSSSAAEVMLLARKLASRRDRRVVVASVHQPSAEMFSLFDKVLVMVGGRQAFFGSASKA 1586
L V+ + G+M+A++G SGAGKST LDL+A +K+ + G++ L + S YV QDD H+ LTVRE++++A RLS G R + R RV+E++ LGL++CA ++G P++RGISGG+ RR+++G G+ R+L LDEPT+GLDSSSA EVM R++A + V+A++H PS E LFD+++V+ G+ AF GS +A
Sbjct: 65 LVDDVSVKVGQGEMLAIMGPSGAGKSTLLDLMAFRKRAMD-GGEVRLNGN-----------LLSNSTMSHVSSYVEQDDEHLGVLTVRETISYASRLSASGFSRSQTRQRVDEIIQALGLQSCANQKIGTPIQRGISGGQKRRVTVGTGLVTYP--RILFLDEPTSGLDSSSAREVMASIRRIA-EAEGITVIATIHAPSIETLELFDQLMVLAKGKVAFLGSLVEA 276
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1078.547.1 vs. uniprot
Analysis Date: 2022-09-19 (
Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90 )
Total hits: 25
0 1 Expect = 8.70e-286 / Id = 87.73 Expect = 4.37e-111 / Id = 88.44 Expect = 3.06e-85 / Id = 92.13 Expect = 2.80e-40 / Id = 39.77 Expect = 2.30e-39 / Id = 42.26 Expect = 5.53e-37 / Id = 43.30 Expect = 6.83e-37 / Id = 43.15 Expect = 1.44e-36 / Id = 38.65 Expect = 4.40e-36 / Id = 39.74 Expect = 7.51e-36 / Id = 41.41 Sequence A0A6H5KKK8_9PHAE D8LSM2_ECTSI D8LSM1_ECTSI W7TLH8_9STRA W7TH06_9STRA A0A8J4FZ89_9CHLO A0A1S8W532_9FUNG A0A0J0XT02_9TREE J5QPF8_TRIAS A0A427XLU8_9TREE Pages
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Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig1078.547.1
>prot_E-siliculosus-1a_F_contig1078.547.1 ID=prot_E-siliculosus-1a_F_contig1078.547.1|Name=mRNA_E-siliculosus-1a_F_contig1078.547.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=675bp
MSRRDMHSTQSSINSSSRQPSSASSAAAGGGGGAAAALTEEEEAHQRQLR back to top mRNA from alignment at E-siliculosus-1a_F_contig1078:29905..35913+
Legend: UTR polypeptide CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-siliculosus-1a_F_contig1078.547.1 ID=mRNA_E-siliculosus-1a_F_contig1078.547.1|Name=mRNA_E-siliculosus-1a_F_contig1078.547.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=6009bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1078:29905..35913+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)GCGTCATTCGTCACACGTGAAGCAAAGCCGGACCCGAAGAGCATGGACAC
ATGAGCCGGAGAGACATGCATAGCACACAAAGTTCTATTAACAGCAGCAG
CCGACAGCCCAGCAGCGCCAGCAGCGCAGCGGCAGGAGGAGGAGGAGGAG
CGGCGGCGGCGTTGACTGAGGAAGAGGAGGCTCACCAACGGCAGTTACGC
GCCTTTGACATCCTGGCCGAGGCCTCTGCGTCTCTGTTCGGCGTGTACAG
CAGCGAAGACGAGGCGTCCCGGTCCTCTGTGTCCAGGTCCTCGTCTCCCG
CCCTCACCGCAGCTCACCAGCTAGGCAGCAGCGGAAGCCTTGCCGCTCCT
GGCGCAGGTGCTAGCAGCAGCAGCAGCGCTCTAAGAGCACCCGCCGGATT
GCGCACCGCGATGGCTCCCAACAATTTCAAGACCGGTGCGCCTGCGGGAG
GTGGTGCGCCTCCCCGCTCACCTTCGAGGTGGACGTCGCCGGCCGCGCCG
CTGCCCCAACAACGGGCAGCAGCAGCGGAGCAGGGCAAGCAGCCGGCGGC
GGCTTCGCCTCCCCCTGCTCAGCAGAAGGACGGCGGCGAGGAGCCGTCGT
ACGACAGGTTGGCGGAGCAGCAGCAGCAGCAGGAGGGGGAGGTGATCTGC
GAGGTGAAGGACCTCTACTACGCGATCGAGCTTCCTCCTACCGCCGCCGC
CGCCGCTCCTCCCCCGGCTCCCGTTGCCCCCGCCCTGCCTCCCGGCAAGA
GGCGGCAGACGGGGTACTCCTTCCGCGGCGGCGCCTTGCTGAAGATCTTC
CGGAAGGACAAGGGGGCCGTGGCGCGAGCCTCTGCGCCCGCGGCGACTCG
GGTCGAGTCTGCCGCGCCCGCCGTGTCAAGCGTTCTTCGAGAGAAGAAGA
AACGGGTGCTGACCCAGGGCGTGAACTGCCGCTTCTGCGCCGGAGACATG
GTGGCCGTCATC GTAAGTCTCTCGCAACGCGTTGCGCTAAAGTGATGGTG
TCGGTTAGGGCGGCGGCAAGCCGCGTGCATGATGGCCGCGGTACAGCAGG
CGGTTTCCCCCTACCATAGCAGCGTACCGGGGGCGCATAGCGGATCCTGC
GAGATCATTCATTGCCGTTGGGTCCGGTTCAAGCGCTTCAACACTTGACT
TGAATCGCCAGTTCTTGGACCATTTAGATACGTACACCCCGTTATTTCCG
TATTTTCCCAAGCGTGCGTGTTTTGGCGCCCCCGCGTCTGCAGTCACGAG
AGCTGCCGGCCGCTCCTTGTTGTTGCTTCATTGCCCCTTTCCTCTCTGTC
GCCGCTGTTGCCTCTCTCTAGCTTGAAGTTCCTTTTGCCAACCTCCATTG
GACCCGAAAAATTATTGCATTATTGCCCTCCGGCCTATTTTTTCGAATTT
CGAAACTAAGTATGCTACGTACACTAAAGCAGCTTCGCCGTACATATGTA
CTTCACGCTGTTGTTTGCGCATGTCCGCGCCCGTCGTCCATCGCTAGGGA
GCATCTGGTGCCGGCAAGTCTACCTTCCTAGACCTCCTGGCAGGGAAGAA
GAAGGAGGGGGAGTGCGCGGGCCAGATACTTCTCACGCAATCCGGCGGCG
GCGGAGGCGGGATAGGCAGCAGGTGGAGGAGAGGCGGCAAGGGCCGGGGG
CGGCCGTCGGTGTACGTTACCCAGGACGACTTCCACGTGGCCGAGCTGAC
CGTTCGGGAGAGCCTCGCTTTCGCGGTTCGCCTGTCTATGGGCGGGAG GT
GCGTGCGTCCCTGCCTGCCTGCAATGCGTTGTGGTGGTGTTTCCTATGGT
TGCGGTGGGCGCGTGTGTGGGGACCTGAAGTTTTTCCAAAAGTAGGGTTG
TACGTTGTAGGTATGCATGATATATATTTTGTCTGTCGGGATCATGGCTG
TGGATAAGTGTGTGACGCTCTGTAGCCCACTTTGCGGCGTCATCAGACAC
CTCACGCCATCTGAACCATTGATTTGTGGTGCGCTCGCAGAGGTTCCCAA
TCGCCCTAGTTGGCACTTGCAAATACGTGAATTGACTGCACATGATTTCT
GCAACGGCTCCTTCTTGTGTCTCGAGCCGAATTCATCCATTTGCGCTATT
TCCATTTCAAACAAATTCTGCAGCGACAGCCTTCTACAACGTTGTCGGAG
ACTTGGATGCATCTGTGTCGCTCTTCACATTAACCACTGCTGTGCATTAG
AAACGTGCAATTGTCACACTCGCTGCAACCAAGCACTAGTACAAAGACAC
CCTGCGTTTTTCACTGGATACTGCAACGCCGCGATAGCACTTTAGGGCAT
TTATTTGTGATCCAGCGGTACACCTGTACCACGTGGTCCTGGATGCGAAG
GAACACGTACTGTAGCACAGCAGTCGTAACCTGGTGCCCTTCGTTGGGTG
GAGTTGGTACCTCCAAGTTTGGCAAATCCGGTATCTGTGCGGAATCACAG
AAAATAATAATATACCGCGCTTGCTCGCTATTTTCCTACTCGTTTTATCG
TATGTACCCCCGTGCGGTAGGGAACTCCGGTCTATCGCGATGTCGATAGT
AGAACCTTGAGAAGAGGTCCCCCTGCCCATCGACACGGCGCGTTTTTTTC
TGAAGGCGTCGACACCACTCTCGTGCAGCATTGTACCATGATTTCGTAAC
CTCGAAATATTTACCCCCGTGCCTTGAAACATGCACAGAGAAAGAGATCG
GCGGGCTCGTGTGGAGGAGCTCCTCGACGTGCTCGGCCTGAGGGCCTGCG
CCGAGGTTAGGGTGGGCAACCCCCTCGAGAGGGGCATCAGCGGCGGCGAG
GCGAGGCGTCTCTCGATGGGCATCGGCGTGGCGGCCCTGGAGAGCGTGCG
TCTGCTCCTCCTCGACGAGCCCACGACG GTGAGAGAGAAAGGGTTTGTTC
TTGGCACCAACTGGCATCACTGGTAACGCAGGGTTAGGCTTACACAAACT
CGAAATAAGCCAAGTCTCCAGTCGGTTTCAGTCCACTTACTGAAAAGACT
TCACCACATCCCTTCGACTGAGGTTATATCTCGAACGGATAAATAGTCTT
TCTGTGAGGTTATGTTTACTTTCTAAAGAGGGTTTGGGCTCGTCGTCGGT
GGTGCCTTCGAAAAACCGAGCGATGATGCGTTGGTCGTGTTAAGAAAACA
AATGGTGCGAGTCCAGGCCTTCGTCCGTGTCATGTAGGCGCACAAGATAG
CCTGTTGTAAGGAGACCTGCTGGCTGGCGTCAAGGTACAAGAAACCTTGT
CTTTAATGCTGTCTAGTTTATCCATGTTTCAGTACTCGGGACAGGTTTCG
CAGGTTTCGCAGTCTGTGGCAGCGTTCTCGAGGAGGTTGAAGGCTCCGAT
GACGGTCGTTAGAACGATCGTTGTTGTGTATACGTGGGTAGCTACAATAG
CTTGCTGACTGTTGCTCACGGCAGCGTTGCTGTTGTTTGTGGTTGTTTGC
GGTCGGTCTCTGGCATCGTTCACGCAGCTTGTTGTAGTGCTGCTTGTGTA
GGTGGTGGCTGTCATGGACGTGTTGGACTTGTGCTGCTGTTGCTGGCATC
GGTGCCGTCTAATTGCTGCGCCTCGGCTGAAGCACACGGCTATTTTCCTG
CGATCCTGATCGACTTCGCGACTGCTGGTATATTTGTTATATTGACCCGT
GCTTTCTCTCCCCCTCTCGCCCTCTCTCTGTCTCTCGCCGTCCCTCTCCC
TCTCCCTCTCCCTCTCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCGCCTCCNNN
NNNNNNNTCTCCCTCTGGCTGGCGTGGTGTGTGGCTCTCTCTCTCTCTCC
CGCCGCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTC
CCTCTCCCTCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCTA
ACGTGCCCCGCGTTCGCGTGTTACCCAGGGTCTCGATTCCTCCTCGGCAG
CGGAGGTAATGCTGCTGGCGAGGAAGCTGGCCTCCCGGCGGGACAGGCGG
GTGGTGGTCGCCTCGGTGCACCAGCCGTCCGCGGAGATGTTCTCGCTCTT
CGACAAG GTACTGTTCAGACGGACGACTGGAGGGAAGGGGAAAATGTTGT
GTGTGCTCCTCTGTTTTAGGTACATGCTCGTGGTGCAAGGACAACAAAAG
AGGGAGGCAGAGGCCGATGGGCAGGTGGGAAGGGAAAAGACTGACAAGCA
GGCAGAAGGGTGAAAGAAAGCGAGAGTATGGAGGTCACACGGACGGACAA
TATTTGCTATAGGGATACGTGCGACAGGGACAGTCGATGGGGTGGCCGAT
GCATTCCTGTTCCTCGCCCACCAAAGCACGAGTGTAACATTTGTGTTGAA
TGCATGCCGTATATGTGCGATGACTCGTACACTGGGACCTAAACCCTGGT
TTGTTTTTCTTCCTCTGCTGCTGCTACCACTGTATACCCATGTCTACGTT
TCCTTCGTTCTTGAACTCTTTCGCTTCTCTGTCCCTCCCCCTGTCCTCTT
TGGAGCAGGTGCTCGTTATGGTGGGCGGTCGTCAGGCGTTCTTCGGTTCC
GCTTCCAAGGCGGCTGACATCCTTTCGAG GTTAGTCTGCTTTCAGTGCTG
TATTAATAGTACTTGTACCCGAAGTATAATTTTTGGTGGCCATATTCGTT
CATCGTTGGTGTTGTCGACGGGTTGTTCGGCACGATCCCGTTAGGGGTAG
TTTTCACCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
CCCCCCCCCCCCCCNNNNNNNCCGGTTGGGGTTTTCGCCGGGTTGTTCGG
CCCGACCCCGTTGGGGGTATTTTTCCCCCCCCCCCCCCCCCTCGGTTATC
ATCACGTAACCCCCCCCCCCCTTTACGCACCCTCCTCTCGGAAAACACGA
TGTCAAACCATGCCCGCAAATGTCCCGGCTTGCGGCGGTGTCGGTCGCAA
CACTTGGCGAATATGCACGTACATATTTATCGGCAGATTGAACTACGCAG
CTTTCGACATATTGTGACAAGTGTATTTCCCTGGAAGCGTGTAGCCAACC
TTACCACAATGCGCTGGTGTATGTAGGCCAGGCAAGGCTTTTCCTCCTTT
TGCGTTTTCCCTGGCTCAATTCGCTCTGCCCCCCCCCCCCCCCCCCCCCC
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCGGTCG
GCCGCCCCCGCCGGCGGCGGGACCACCCCCCCCCCCCNNNNNNNNNNAGC
GTTTTTCCAACCTTCCCCCAATGCGCTGGGGTATGTAGGCCAGGCAAGGC
TTTTCCCCCTTTTGCGTTTTCCCCGGCCCAATTCCCCCCCCCCCCCCCCC
CCCCCCACCCCCCCTCTCACCGTCCACGCTGCCCGTTCACCGTCGTCTCT
TTCGTTGGTTTTCCCACTAAACATTAAAAAAAAACAGGCCTGAGCTCGGG
ATCATGCCCACTCCGGGGCAGAACTCGGCGGAGTTCATCCTCCTCGCCGC
GAAGGCTGTCCTGCAGTCGTCGCAGCAGCAACAAGAGGGCCGGGCGTCGG
GGAGGGGAGCGCGCTCACCCGAACCGTCGTACGCCTCCTCCTCCATCCAC
TCCTCGGCGTCCACTTCCCCCCAGGGGCTTATCGGCGTGGACCCTTCTTC
CCTGCTCGGGGTGGGAGACATCGGCGGCGGCGGCGGCGGATCGACGATGG
GGGGAGACTACCTGTACGAGGACGCGGAGAAGGGCTTGTTCAACGAGCCC
CCCGGCGGCAAGCCGGCGGCCTACGGGGGCAAGGGCGGTTACGCCGAGGA
GGAAGGGGCGGAGGAAGGGAAGGAGGAGGGCACGACGACCCTGGAGCTGC
TGCAGCGGCGGCCGTGGGGCATCGGGGGCTGGTTCGAGGAGTCGTCGCAC
GCGGTGGGG back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig1078:29905..35913+
>mRNA_E-siliculosus-1a_F_contig1078.547.1 ID=mRNA_E-siliculosus-1a_F_contig1078.547.1|Name=mRNA_E-siliculosus-1a_F_contig1078.547.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=4050bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1078:29905..35913+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female) back to top