mRNA_E-siliculosus-1a_F_contig1076.532.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1076.532.1 vs. uniprot
Match: D7G7U6_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G7U6_ECTSI) HSP 1 Score: 883 bits (2282), Expect = 0.000e+0 Identity = 533/597 (89.28%), Postives = 538/597 (90.12%), Query Frame = 1
Query: 55 MENTNSSHDLSFDVLGVLPTFPTTTPLEPSLIGSHTRTARPQSHHSYALGGEGIASAGTGGSTESGLEQGFERESYDSDQELEAIRGSVRSLRAQRAAVEKLKEKARXXXXXXXXXXXXXXEAEEKVRELRAQGGRDVVRRLMDEVTELRARLKATSTAFQTRENSVAELREAVQTLTLDLRAGQEKARAQSRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKCAASGRELASLSALLREANATLDASKGSMQATVAKQAEKLEAARNEKESLLFEKGQTQERVKELTSMCERQRSKLADAGHRARELERLASAAKKETRLAQEQAAKLKTELSAVDKRRREEDAGATIKLRTAARQVEELRSEVVLVKSEAAEKARQLVRHRDEMSAFREDVSKLREAAVQQGDMRQAVRDRDETIRDLRRQLELERRERGQWGQARKQLLLEFCEEENKLRSTLQPAQHHEPRSTRRQGRKQAALEHAPPTGSDRRLTRDKPLSRHATIRNIRTNGDSRRGSANSSLTGEACVAREEEKVFGDSEAGEVLLDLAGGGVRNGGTGTLGGYEEGSSSRTMASDEFEMRPGQQLSQQA 1845
MENTNSS DLSFDVLGVLPT PTTTPLEPSLIGSHTRT RPQSHHSYALGGEGIAS GTGGSTESGLEQGFERESYDSDQELEAIRGSVRSLRAQRAAVEKLKEKAR XXXXXXXXXXXXX RAQGGRDVVRRLMDEVTELRARLKATSTAFQTRENSVA+LREAVQTLTLDLRAGQEKARAQSR ++CAASGRELASLSALLREANATLDASKGSMQATVAKQAEKLEAAR EKESLLFEKGQTQERVKELTSMCERQRSKLADAGHRARELERLASAAKKETRLAQEQAAKLKTELSA DKRRREEDAGATIKLRTAARQVEELRSEVVLVKSEAAEKARQLVRHRDEMSAFREDVSKLREAAVQQGDMRQAVRDRDETIRDLRRQLELERRERGQWGQARKQLLLEFCEEENKLRSTLQPAQH EPRSTRRQGRKQA LEHAPPTGSDRRLTR KPLSRHATIRNIRTNGDSRR SANSSL GEACVAREEEKVFGDSEAGEVLLDLAGGGVR+GGTGTLGGYEEG+SSRTMASDEFEMRPGQQLSQQA
Sbjct: 1 MENTNSSQDLSFDVLGVLPTVPTTTPLEPSLIGSHTRTGRPQSHHSYALGGEGIAS-GTGGSTESGLEQGFERESYDSDQELEAIRGSVRSLRAQRAAVEKLKEKARLXXXXXXXXXXXXXXXXXXXXXXRAQGGRDVVRRLMDEVTELRARLKATSTAFQTRENSVADLREAVQTLTLDLRAGQEKARAQSRKLE-----------------------------------QQCAASGRELASLSALLREANATLDASKGSMQATVAKQAEKLEAARKEKESLLFEKGQTQERVKELTSMCERQRSKLADAGHRARELERLASAAKKETRLAQEQAAKLKTELSAADKRRREEDAGATIKLRTAARQVEELRSEVVLVKSEAAEKARQLVRHRDEMSAFREDVSKLREAAVQQGDMRQAVRDRDETIRDLRRQLELERRERGQWGQARKQLLLEFCEEENKLRSTLQPAQHQEPRSTRRQGRKQAILEHAPPTGSDRRLTRHKPLSRHATIRNIRTNGDSRRSSANSSLRGEACVAREEEKVFGDSEAGEVLLDLAGGGVRDGGTGTLGGYEEGNSSRTMASDEFEMRPGQQLSQQA 561 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1076.532.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90) Total hits: 1
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig1076.532.1 >prot_E-siliculosus-1a_F_contig1076.532.1 ID=prot_E-siliculosus-1a_F_contig1076.532.1|Name=mRNA_E-siliculosus-1a_F_contig1076.532.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=616bp SGSWTLGRDRDRDCRDTGMENTNSSHDLSFDVLGVLPTFPTTTPLEPSLIback to top mRNA from alignment at E-siliculosus-1a_F_contig1076:3905..9373- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_F_contig1076.532.1 ID=mRNA_E-siliculosus-1a_F_contig1076.532.1|Name=mRNA_E-siliculosus-1a_F_contig1076.532.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=5469bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1076:3905..9373- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig1076:3905..9373- >mRNA_E-siliculosus-1a_F_contig1076.532.1 ID=mRNA_E-siliculosus-1a_F_contig1076.532.1|Name=mRNA_E-siliculosus-1a_F_contig1076.532.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=3696bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1076:3905..9373- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top |