prot_E-siliculosus-1a_F_contig1076.533.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig1076.533.1
Unique Nameprot_E-siliculosus-1a_F_contig1076.533.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length206
Homology
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BLAST of mRNA_E-siliculosus-1a_F_contig1076.533.1 vs. uniprot
Match: D7G7U7_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G7U7_ECTSI)

HSP 1 Score: 131 bits (329), Expect = 5.640e-35
Identity = 71/71 (100.00%), Postives = 71/71 (100.00%), Query Frame = 0 
Query:   23 MPFSLTENLPFLALPLALITLKVTYDVLPFMAFLALVAVAVGCYMFYAGKSSPAAQRTAKKAEATADSLIR 93
            MPFSLTENLPFLALPLALITLKVTYDVLPFMAFLALVAVAVGCYMFYAGKSSPAAQRTAKKAEATADSLIR
Sbjct:    1 MPFSLTENLPFLALPLALITLKVTYDVLPFMAFLALVAVAVGCYMFYAGKSSPAAQRTAKKAEATADSLIR 71
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1076.533.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G7U7_ECTSI5.640e-35100.00Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 81..144
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 49..69
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 44..48
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..20
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 70..205
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 21..43
NoneNo IPR availableTMHMMTMhelixcoord: 49..71

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig1076contigE-siliculosus-1a_F_contig1076:10461..14296 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig1076.533.1mRNA_E-siliculosus-1a_F_contig1076.533.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig1076 10461..14296 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig1076.533.1 ID=prot_E-siliculosus-1a_F_contig1076.533.1|Name=mRNA_E-siliculosus-1a_F_contig1076.533.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=206bp
ATRKAPAPGTRGRPSPLSSSGTMPFSLTENLPFLALPLALITLKVTYDVL
PFMAFLALVAVAVGCYMFYAGKSSPAAQRTAKKAEATADSLIRELTREED
RAKEEAARKQAAKDRKAAAKQKQKQEAERKAAQAAKEAAAAKALAQQEAE
SKPRSAPQQQQQQPSSGKSKKQSKKQSKPAPPVEEEDSDDEDDFLLRMAD
LERAR*
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