mRNA_E-siliculosus-1a_F_contig1074.525.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	mRNA_E-siliculosus-1a_F_contig1074.525.1
Unique Name	mRNA_E-siliculosus-1a_F_contig1074.525.1
Type	mRNA
Organism	Ectocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)

Homology

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BLAST of mRNA_E-siliculosus-1a_F_contig1074.525.1 vs. uniprot
Match: D7G0R2_ECTSI (Sister chromatid cohesion complex Cohesin, subunit STAG/IRR1/SCC3 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0R2_ECTSI)

HSP 1 Score: 785 bits (2028), Expect = 1.980e-279
Identity = 437/459 (95.21%), Postives = 442/459 (96.30%), Query Frame = 2

Query:  575 SAPPAPSGKTVSRGAKNTGGXXXXXXXXXXXXIPTSRKAATTSAAQADGEESEXXXXXXXXXXXXXXXXXXXXENGLMEAVLRNDTALSSVVSDWVSSYKEDSDKAMKELLNFVFLACGAPSTEGPYGPPADVSVIEMDGEQWAELLKVVIEDMQGQPGTKGVPSFPLAPAAKGKSGKPARIFRSNYCEVFNRLAEACRRGDDHDASTLEAVVGMLVALSSHSASQDIRLAATLAGMEMGLGVAEELAGLHEKLGLSERQLEAAKSSAGKGGGKKAAEKSRKIQGLESQVERIFSATETLTTVSDLVFSKITQKRYRDVSPLIRSIALEGLSKIMLALPEFYVQDKLMRYHGWSLNDKNPAVRVLALQSIQRLLRDPASSARLEKFSAHFFSRVKAMIQDVDNTVAREAGVALRLMLSNGFLESIERADEMDIEAGIFEEGLGLPARTECMGFFVDGIQ 1951
            SAPPAPSGK+ SRGAKNTG XXXXXXXXXXXXIPTSRKAATTSAA+ADGEESE        XXXXXXXXX   ENGLMEAVLRNDTALSSVVSDWVSSYKEDSDKAMKELLNFVFLACGAPSTEGPYGPP+DVSVIEMDGEQW ELLKVVIEDMQGQPGTKG PSFPLAPAAKGKSGKPARIFRSNYCEVFNRLAEACRRGDDHDASTLEAVVGMLVALSSHSASQDIRLAATLAGMEMGLGVAEELAGL EKLGLSERQLEAAKSSAGKGGGKKAAEKSRKIQGLESQVER+FSATETLTTVSDLVFSKITQKRYRDVSPLIRSIALEGLSKIMLALPEFYVQDKLMRYHGWSLNDKNPAVRVLALQSIQRLLRDPASSARLEKFSAHFFSRVKAMIQDVD+ VAREAGVALRLMLSNGFLESIERADEMDIEAGIFEEGLGLPARTECMGFFVDGIQ
Sbjct:  134 SAPPAPSGKSASRGAKNTGXXXXXXXXXXXXXIPTSRKAATTSAAEADGEESEGEDGNALGXXXXXXXXXRGAENGLMEAVLRNDTALSSVVSDWVSSYKEDSDKAMKELLNFVFLACGAPSTEGPYGPPSDVSVIEMDGEQWVELLKVVIEDMQGQPGTKGAPSFPLAPAAKGKSGKPARIFRSNYCEVFNRLAEACRRGDDHDASTLEAVVGMLVALSSHSASQDIRLAATLAGMEMGLGVAEELAGLREKLGLSERQLEAAKSSAGKGGGKKAAEKSRKIQGLESQVERVFSATETLTTVSDLVFSKITQKRYRDVSPLIRSIALEGLSKIMLALPEFYVQDKLMRYHGWSLNDKNPAVRVLALQSIQRLLRDPASSARLEKFSAHFFSRVKAMIQDVDSAVAREAGVALRLMLSNGFLESIERADEMDIEAGIFEEGLGLPARTECMGFFVDGIQ 592

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BLAST of mRNA_E-siliculosus-1a_F_contig1074.525.1 vs. uniprot
Match: A0A6H5J7R4_9PHAE (SCD domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J7R4_9PHAE)

HSP 1 Score: 629 bits (1621), Expect = 1.590e-206
Identity = 333/368 (90.49%), Postives = 344/368 (93.48%), Query Frame = 2

Query:  860 VSSYKEDSDKAMKELLNFVFLACGAPSTEGPYGPPADVSVIEMDGEQWAELLKVVIEDMQGQPGTKGVPSFPLAPAAKGKSGKPARIFRSNY----CEVFNRLAEACRRGDDHDASTLEAVVGMLVALSSHSASQDIRLAATLAGMEMGLGVAEELAGLHEKLGLSERQLEAAKSSAGKGGGKKAAEKSRKIQGLESQVERIFSATETLTTVSDLVFSKITQKRYRDVSPLIRSIALEGLSKIMLALPEFYVQDKLMRYHGWSLNDKNPAVRVLALQSIQRLLRDPASSARLEKFSAHFFSRVKAMIQDVDNTVAREAGVALRLMLSNGFLESIERADEMDIEAGIFEEGLGLPARTECMGFFVDGIQ 1951
            VSSYK+DSDKAM+ELLNF+FLACGAPST GPYGPPADVSVIEMDGEQWAELLKVVIEDMQGQPGTKGVPSFPLAPAAKGKSGK       N       + + L EACRRGDDHDASTLEAVVG+LVAL+SHSASQDIRLAATLAGME+GLGVAE+LAGLHEKLGLSERQLEAAKSSAGKGGGKKAAEKSRKIQGLESQVERI SATETLTTVSDLVFSKITQKRYRDVSPLIRSIALEGLSKIMLALPEFYVQDKLMRYHGWSLNDKNPAVRVLALQSIQRLLRDPASSARLEKFSAHFFSRVK MIQDVD+TVAREA V LRLMLSNG+LESIERADEMDIEAGIFEE L LPARTECMGFFVDGIQ
Sbjct:    3 VSSYKKDSDKAMQELLNFIFLACGAPSTAGPYGPPADVSVIEMDGEQWAELLKVVIEDMQGQPGTKGVPSFPLAPAAKGKSGKVVATSLDNLPVLRTILTSGLVEACRRGDDHDASTLEAVVGVLVALASHSASQDIRLAATLAGMEVGLGVAEDLAGLHEKLGLSERQLEAAKSSAGKGGGKKAAEKSRKIQGLESQVERILSATETLTTVSDLVFSKITQKRYRDVSPLIRSIALEGLSKIMLALPEFYVQDKLMRYHGWSLNDKNPAVRVLALQSIQRLLRDPASSARLEKFSAHFFSRVKTMIQDVDSTVAREAVVVLRLMLSNGYLESIERADEMDIEAGIFEEDLSLPARTECMGFFVDGIQ 370

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BLAST of mRNA_E-siliculosus-1a_F_contig1074.525.1 vs. uniprot
Match: A0A225W8S9_9STRA (SCD domain-containing protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225W8S9_9STRA)

HSP 1 Score: 130 bits (327), Expect = 1.320e-27
Identity = 93/333 (27.93%), Postives = 169/333 (50.75%), Query Frame = 2

Query:  803 LMEAVLRNDTALSSVVSDWVSSYKEDSDKAMKELLNFVFLACGAPSTEGPYGPPADVSVIEMDGEQWAELLKVVIEDMQGQPGTKGVPSFPLAPAAKGKSGKPARIFRSNYCEVFNRLAEACRRGDDHDASTL-EAVVGMLVALSSHSASQDIRLAATLAGMEMGLGVAEELAGLHEKLGLSERQLEAAKSSAGKGGGKKAAEKSRKIQGLESQVERIFSATETLTTVSDLVFSKITQKRYRDVSPLIRSIALEGLSKIMLALPEFYVQDKLMRYHGWSLNDKNPAVRVLALQSIQRLLRDPASSARLEKFSAHFFSRVKAMIQDVDNTVARE 1798
            L EA+    T L +++S+W   ++ED++KA +E+LN V LACG  S   P   P  ++ ++M+    + L+  V+ED++   G      +P+    +G      + F+ N+ E +  L + C   +    S +    +  L  LSS S  + IR  +T+A + +   +    A + E+L ++ RQL A  +S G   G + +   RK+  L+       S  + +  + + VF+ +   RYRDV P IR + ++ L   +  LP+ +++D  ++Y GW L+DK+ +VR+  ++ +  L  + +   R+E F++ F SR   +  DVD  V  E
Sbjct:  126 LFEAIKSRKTPLENLLSEWRERFEEDNEKATREVLNLVLLACGGTSPCVPESEP--LAQLDMN---MSHLMDHVVEDLENANG-----EYPIMSRGRG-----TKKFQRNFEEFWEVLVKECYESEILFTSEIANTFIDWLTTLSS-SELRPIRHTSTVAILALSNSLVRTAASISEQLAIATRQLNAETNSPGTTPGSRKSPNIRKVALLKENKVLYESRLQQIWKLVNSVFTGVVVHRYRDVMPEIRVVTMQCLGHWITTLPDRFLKDNFLKYLGWLLSDKSASVRIEVVEILCELYGNESFKQRMELFTSRFLSRYLELCTDVDVGVVEE 442

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BLAST of mRNA_E-siliculosus-1a_F_contig1074.525.1 vs. uniprot
Match: H2UK91_TAKRU (SCD domain-containing protein n=3 Tax=Takifugu rubripes TaxID=31033 RepID=H2UK91_TAKRU)

HSP 1 Score: 120 bits (300), Expect = 2.480e-24
Identity = 90/351 (25.64%), Postives = 173/351 (49.29%), Query Frame = 2

Query:  803 LMEAVLRNDTALSSVVSDWVSSYKEDSDKAMKELLNFVFLACGAPSTEGPYGPPADVSVIEMDGEQWAELLKVVIEDMQGQPGTKGVPSFPLAPAAKGKSGKPARIFRSNYCEVFNRLAEACRRGDDHDASTLEAVVGMLVALSSHSASQDIRLAATLAGMEMGLGVAEELAGLHEKLGLSERQ--LEAAKSSAGKGGGKKAAEKSRKIQGLESQVERIFSATETLTTVSDLVFSKITQKRYRDVSPLIRSIALEGLSKIMLALPEFYVQDKLMRYHGWSLNDKNPAVRVLALQSIQRLLRDPASSARLEKFSAHFFSRVKAMIQDVDNTVAREAGVALRLMLSNGFLESI 1849
            + EAV     A+ +VV +W+ SYK++   +   L+NF+  +CG             VS    D  Q AE++  + +D       +   ++PL+       G   + F++  CE    L  +CR    +D     +++ +L  LS  S  +  R  +TL  M++  G+ +   G+  +L  ++R+  +E +K    +         S +++ L++ +  +    E ++++ + +F  +   RYRD  P IR+I +E L   +   PE ++ DK ++Y GW+L+DK  +VR+  ++++Q L ++     RLE F++ F  R+ +M+ D D+ VA E  + L L++  G  E +
Sbjct:  102 IYEAVSSGKNAMLTVVDEWLDSYKQNQKDSFLVLINFIVQSCGCKGV---------VSSEMFDNLQNAEIIGALTKDFN-----EDSVNYPLS-----TPGPQLKRFKAGLCEFAQLLVYSCRNSLIYDEYLFPSLLALLTGLSD-SQVRAFRHTSTLLAMKLMTGLVKVFLGVSIQLQTAQRRCDIECSKRDPDRA--------SDRLEELKASISELHENKEEVSSMMNGMFRGVFVHRYRDQLPEIRAICIEELGIWLKLDPEHFLNDKCLKYLGWTLHDKRSSVRLQCVRALQGLYQEKEFIGRLELFTSRFKERMLSMVLDKDSDVAVEV-LNLLLLIHQGTEEGL 423

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BLAST of mRNA_E-siliculosus-1a_F_contig1074.525.1 vs. uniprot
Match: A0A8J4S7P5_9STRA (SCD domain-containing protein n=2 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A8J4S7P5_9STRA)

HSP 1 Score: 119 bits (299), Expect = 2.710e-24
Identity = 108/377 (28.65%), Postives = 180/377 (47.75%), Query Frame = 2

Query:  809 EAVLRNDTALSSVVSDWVSSYKEDSDKAMKELLNFVFLACGAPSTEGPYGPPADVSVIEMDGEQWAELLKVVIEDMQGQPGTKGVPSFPLAPAAKGKSGKPARIFRSNYCEVFNRLAEACRRGDDHDASTLEA-VVGMLVALSSHSASQDIRLAATLAGMEMGLGVAEELAGLHEKLGLSERQLEAAKSSAGKGGGKK--AAEKS---RKIQGLESQVERIFSATETLTTVSDLVFSKITQKRYRDVSPLIRSIALEGLSKIMLALPEFYVQDKLMRYHGWSLNDKNPAVRVLALQSIQRLLRDPASSARLEKFSAHFFSRVKAMIQDVDNTVAREA-----GVALRLMLSNGF-LESIER----ADEMDIEAGIFE 1891
            E + R+   L S++  W   ++ D + A +E+LNFV  ACG      P   P  ++ +EM      +L+  V+ED++   G      +P+A  ++GK  K       ++ EVF    + C   +   AS +    V  L  LSS S  + IR   T+A + +   +      + ++L ++ RQL A  +S G    +    A KS   RK+  L+       S  + +  + +LVF+ +   RYRDV P IR   ++ L   +  +P+ +++D  ++YHGW LNDK   VR+  +Q +  L  + A + RLE F++ F  R   +  DVD+TV +E       V  R ++S+   L+ +E+    AD  DI     E
Sbjct:   84 EVITRDKKPLESLLVKWRDRFEIDEESATREVLNFVLQACGGTGQCVPEAEP--LAQLEM-----GDLVNHVVEDLEKTNG-----DYPIA--SRGKGMKKFHRSFEDFWEVF---VKECYESEILFASEIATNFVDWLTTLSS-SEVRAIRHTTTIAALALSNALVSTATAISDQLAIATRQLNAETNSPGTKDEQTPPVARKSPNIRKVALLKENKALYESRLQQVLKLVNLVFTGVVVHRYRDVMPEIRVATMQCLGYWITTMPDQFLKDNFLKYHGWLLNDKVAPVRLEVVQILCELYENDAFTERLELFTSRFLPRYLELCNDVDDTVVQECIHLLIAVDKRNLISSDIELQPVEKLVFDADHEDIRKAAAE 442

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BLAST of mRNA_E-siliculosus-1a_F_contig1074.525.1 vs. uniprot
Match: A0A8C5HDV9_9TELE (Stromal antigen 3 n=1 Tax=Gouania willdenowi TaxID=441366 RepID=A0A8C5HDV9_9TELE)

HSP 1 Score: 119 bits (297), Expect = 5.750e-24
Identity = 99/386 (25.65%), Postives = 183/386 (47.41%), Query Frame = 2

Query:  797 NGLMEAVLRNDTALSSVVSDWVSSYKEDSDKAMKELLNFVFLACGAPSTEGPYGPPADVSVIEMDGEQWAELLKVVIEDMQGQPGTKGVPSFPLAPAAKGKSGKPARIFRSNYCEVFNRLAEACRRGDDHDASTLEAVVGMLVALSSHSASQDIRLAATLAGMEMGLGVAEELAGLHEKLGLSERQLEAAKSSAGKGGGKKAAEK-SRKIQGLESQVERIFSATETLTTVSDLVFSKITQKRYRDVSPLIRSIALEGLSKIMLALPEFYVQDKLMRYHGWSLNDKNPAVRVLALQSIQRLLRDPASSARLEKFSAHFFSRVKAMIQDVDNTVAREAGVALRLMLSNGFLESIERADEMDIEAGIFEEGLGLPARTECMGFFVDGIQ 1951
            N L EAV    +A+ +VV +W+ SYK   +  +  L+NF+ L+CG             VS    +  + AE++  + ++       +    +PL        G   + F+S  CE    L  +CR    +D     +++ +L  LS  S  +  R  +TL  M++  G+ +       +L  ++RQ E  ++       K+A +K S +++ L++ +  +    E L+++ + VF  +   RYRD  P IR+  +E L   +   PE ++ D+ ++Y GW+L+DK   VR+  ++++Q L ++     RLE F++ F  R+ +M+ D D  VA E  V L L++     E ++  +   I   ++    GL   T   GF  + ++
Sbjct:   81 NDLYEAVRSGKSAMVAVVDEWLDSYKRSQEAGLLVLINFIVLSCGCKGV---------VSQEMFENMENAEIISKLTKEFN-----EDSVVYPLC-----APGPRLKRFKSGLCEFVQVLVRSCRNSFIYDEFLFPSLLTLLTGLSD-SQVRAFRHTSTLLAMKLMTGLVDVAMVQCVQLQTTQRQFEMERN-------KRAEDKASDRLEELQNSIGELQENREELSSMMNAVFRGVFVHRYRDRLPDIRATCIEELGIWIKTDPEDFLNDRCLKYLGWTLHDKQSPVRLQCVRALQGLYQEKEFIGRLELFTSRFKERMLSMVLDKDPDVAVEV-VNLLLLIQQRTEEGLKEEECSHIYPLVYVSHRGLT--TAAGGFLYNKLK 436

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BLAST of mRNA_E-siliculosus-1a_F_contig1074.525.1 vs. uniprot
Match: UPI00186403F1 (cohesin subunit SA-1 n=1 Tax=Megalops cyprinoides TaxID=118141 RepID=UPI00186403F1)

HSP 1 Score: 118 bits (296), Expect = 7.580e-24
Identity = 97/354 (27.40%), Postives = 166/354 (46.89%), Query Frame = 2

Query:  803 LMEAVLRNDTALSSVVSDWVSSYKEDSDKAMKELLNFVFLACGAPSTEGPYGPPADVSVIEMDGEQWAELLKVVIEDMQGQPGTKGVPSFPLAPAAKGKSGKPARIFRSNYCEVFNRLAEACRRGDDHDASTLEAVVGMLVALSSHSASQDIRLAATLAGMEMGLGVAEELAGLHEKLGLSERQLEAAKSSAGKGGGKKAAEKSR-KIQGLESQVERIFSATETLTTVSDLVFSKITQKRYRDVSPLIRSIALEGLSKIMLALPEFYVQDKLMRYHGWSLNDKNPAVRVLALQSIQRLLRDPASSARLEKFSAHFFSRVKAMIQDVDNTVAREAGVALRLMLSNGFLESIERAD 1861
            L EAV    +A  +VV DW+ SYK+D + A+ EL+NFV L CG             VS    D  Q AE++ V+ ++       +    +PL+      SG   R FR+  CE    L    +    +D     ++V +L  LS  S  +  R  +TL  M++   + E    +  +   + R+ EA ++       K+   +++ +++ L +    +    E L ++   VF  +   RYRD  P IR++ +E L   +   P  ++ D  ++Y GW+L+DK  AVR+  ++++Q L R+     RLE F++ F  R+  M+ D D  VA E  + L L++     E +   +
Sbjct:   99 LYEAVRSGKSATVTVVDDWLDSYKQDREAALLELINFVVLCCGCKGV---------VSREMFDTMQNAEIISVLTKEFN-----EDSVRYPLS-----ASGPQWRRFRAGLCEFVRLLVRRAQNSLLYDEYLFSSLVALLAGLSD-SQVRAFRHTSTLIAMKLMTALVEVAVMVFSQTETTHRRYEAERN-------KELERRAQDRLEELHTTYTELREHQEELQSLMSAVFKGVFVHRYRDRVPEIRAVCMEELGLWLRQHPGAFLTDGHLKYLGWTLHDKQGAVRLQCVRALQGLYREEDFIGRLELFTSRFKERMLCMVLDKDGDVAVEV-IQLLLLIQQKTEEGLSEEE 424

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BLAST of mRNA_E-siliculosus-1a_F_contig1074.525.1 vs. uniprot
Match: A0A2P6MXW1_9EUKA (Cohesin subunit SA-1 n=1 Tax=Planoprotostelium fungivorum TaxID=1890364 RepID=A0A2P6MXW1_9EUKA)

HSP 1 Score: 117 bits (294), Expect = 1.270e-23
Identity = 87/334 (26.05%), Postives = 168/334 (50.30%), Query Frame = 2

Query:  803 LMEAVLRNDTALSSVVSDWVSSYKEDSDKAMKELLNFVFLACGAPSTEGPYGPPADVSVIEMDGEQWAELLKVVIEDMQGQPGTKGVPSFPLAPAAKGKSGKPARIFRSNYCEVFNRLAEACRRGDDHDASTLEAVVGMLVALSSHSASQDIRLAATLAGMEMGLGVAEEL-AGLHEKLGLSERQLEAAKSSAGKGGGKKAAEKSRKIQGLESQVERIFSATETLTTVSDLVFSKITQKRYRDVSPLIRSIALEGLSKIMLALPEFYVQDKLMRYHGWSLNDKNPAVRVLALQSIQRLLRDPASSARLEKFSAHFFSRVKAMIQDVDNTVAREA 1801
            L EA+ +  T+++++V +W+ +Y +D  +A  +++NF+  ACG  + E        ++V E + ++  ELL  +I     +   +G  ++P+  A KG +      F S + + +N++          D   L+++   + A S+ + ++  R  AT+A ME+   + + +   +++ +   +R +   +      G +K  + ++K   LE   +++  A   L             K YRD  P IR   +E L + + + PEFY+ DKL++Y GW+L+DK+  VR+LAL+ ++RL   P  +  LE F + F +R+  M+ D +  V  EA
Sbjct:   32 LFEALKKKGTSINTLVDEWIKNYTKDRKEATVQIINFLIKACGCETGE--------LTVDEYEEDEAQELLNGIITPEYLK---EGEMNYPIV-ARKGTN------FASQFAKFWNQIISKSTNKILFDGYFLDSISSWISAFSN-ALARPFRHTATMAAMEVNSALIKVINERINKDISALDRSISTERRKGASSGSQKMKDLTKKKNRLEQNKQQLQEAMNVL------------YKGYRDTVPEIRCTCVEALGRWINSYPEFYLDDKLLKYIGWALSDKDARVRILALKVVERLYAQPELADTLEIFISTFENRLIQMVADNEIDVGVEA 334

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BLAST of mRNA_E-siliculosus-1a_F_contig1074.525.1 vs. uniprot
Match: A0A5C6MJK5_9TELE (DNA helicase n=1 Tax=Takifugu flavidus TaxID=433684 RepID=A0A5C6MJK5_9TELE)

HSP 1 Score: 117 bits (294), Expect = 1.630e-23
Identity = 89/351 (25.36%), Postives = 172/351 (49.00%), Query Frame = 2

Query:  803 LMEAVLRNDTALSSVVSDWVSSYKEDSDKAMKELLNFVFLACGAPSTEGPYGPPADVSVIEMDGEQWAELLKVVIEDMQGQPGTKGVPSFPLAPAAKGKSGKPARIFRSNYCEVFNRLAEACRRGDDHDASTLEAVVGMLVALSSHSASQDIRLAATLAGMEMGLGVAEELAGLHEKLGLSERQ--LEAAKSSAGKGGGKKAAEKSRKIQGLESQVERIFSATETLTTVSDLVFSKITQKRYRDVSPLIRSIALEGLSKIMLALPEFYVQDKLMRYHGWSLNDKNPAVRVLALQSIQRLLRDPASSARLEKFSAHFFSRVKAMIQDVDNTVAREAGVALRLMLSNGFLESI 1849
            + EAV     A+ +VV +W+ SYK++   +   L+NF+  +CG             VS    D  Q AE++  + +D       +   ++PL+       G   + F++  CE    L  +CR    +D     +++ +L  LS  S  +  R  +TL  M++   + +   G+  +L  ++R+  +E +K    +         S +++ L++ +  +    E ++++ + +F  +   RYRD  P IR+I +E L   +   PE ++ DK ++Y GW+L+DK  +VR+  ++++Q L ++     RLE F++ F  R+ +M+ D D+ VA E  + L L++  G  E +
Sbjct:  102 IYEAVSSGKNAMLTVVDEWLDSYKQNQKDSFLVLINFIVQSCGCKGV---------VSSEMFDNLQNAEIIGALTKDFN-----EDSVNYPLS-----TPGPQLKRFKAGLCEFAQLLVYSCRNSLIYDEYLFPSLLALLTGLSD-SQVRAFRHTSTLLAMKLMTSLVKVFLGVSIQLQTAQRRCDIECSKRDPDRA--------SDRLEELKASISELHENKEEVSSMMNGMFRGVFVHRYRDQLPEIRAICIEELGIWLKLDPEHFLNDKCLKYLGWTLHDKRSSVRLQCVRALQGLYQEKEFIGRLELFTSRFKERMLSMVLDKDSDVAVEV-LNLLLLIHQGTEEGL 423

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BLAST of mRNA_E-siliculosus-1a_F_contig1074.525.1 vs. uniprot
Match: A0A6I8RR30_XENTR (Stromal antigen 3 n=5 Tax=Xenopus tropicalis TaxID=8364 RepID=A0A6I8RR30_XENTR)

HSP 1 Score: 117 bits (292), Expect = 2.400e-23
Identity = 91/348 (26.15%), Postives = 169/348 (48.56%), Query Frame = 2

Query:  803 LMEAVLRNDTALSSVVSDWVSSYKEDSDKAMKELLNFVFLACGAPSTEGPYGPPADVSVIEMDGEQWAELLKVVIEDMQGQPGTKGVPSFPLAPAAKGKSGKPARIFRSNYCEVFNRLAEACRRGDDHDASTLEAVVGMLVALSSHSASQDIRLAATLAGMEMGLGVAEELAGLHEKLGLSERQ--LEAAKSSAGKGGGKKAAEKSRKIQGLESQVERIFSATETLTTVSDL---VFSKITQKRYRDVSPLIRSIALEGLSKIMLALPEFYVQDKLMRYHGWSLNDKNPAVRVLALQSIQRLLRDPASSARLEKFSAHFFSRVKAMIQDVDNTVAREAGVALRLMLSN 1831
            L EA+    +A+  +V DW+ SYK+D + A+ EL+NF+ LACG             V++  ++  Q +++++ +  +   +      P +PL       S KP + F +N+ + F  L   C+    +D   ++A++ +L  LS  S  +  R  +T A +++  G+ +    +   L  ++RQ  +E AKS            ++R  + LE+ + +       L  V D+   +F  +   RY D S  IR+I +E +   M    + ++ D  ++Y GW+L DK  AVR+  ++++  L   P  + +LE F++ F +R+  M+ D +  VA EA   + L+  N
Sbjct:  119 LFEAIRMGRSAMHVLVDDWLDSYKQDREAALLELINFLMLACGCNGV---------VTLEMLENMQNSDIIRKMTMEFNEE-----TPDYPLL-----LSTKPWKKFHANFGDFFKVLVNRCQYNIIYDELLMDALISLLTGLSD-SQVRAFRHTSTFAAVKLMSGLVKVAWDVSHHLNTTKRQFVVEHAKSP-----------ETRSPERLEALLAKQRGLQGNLEEVVDMMNGIFKGVFVHRYCDTSADIRAICMEEIGVWMRTYSQSFLSDSCLKYVGWTLYDKQGAVRLQCIRTLHSLYSVPEMAPKLELFTSRFKNRMVFMVLDKEQQVAVEAIKLIGLISQN 435

The following BLAST results are available for this feature:

BLAST of mRNA_E-siliculosus-1a_F_contig1074.525.1 vs. uniprot

BLAST of mRNA_E-siliculosus-1a_F_contig1074.525.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D7G0R2_ECTSI	1.980e-279	95.21	Sister chromatid cohesion complex Cohesin, subunit...	[more]
A0A6H5J7R4_9PHAE	1.590e-206	90.49	SCD domain-containing protein n=1 Tax=Ectocarpus s...	[more]
A0A225W8S9_9STRA	1.320e-27	27.93	SCD domain-containing protein n=1 Tax=Phytophthora...	[more]
H2UK91_TAKRU	2.480e-24	25.64	SCD domain-containing protein n=3 Tax=Takifugu rub...	[more]
A0A8J4S7P5_9STRA	2.710e-24	28.65	SCD domain-containing protein n=2 Tax=Phytophthora...	[more]
A0A8C5HDV9_9TELE	5.750e-24	25.65	Stromal antigen 3 n=1 Tax=Gouania willdenowi TaxID...	[more]
UPI00186403F1	7.580e-24	27.40	cohesin subunit SA-1 n=1 Tax=Megalops cyprinoides ...	[more]
A0A2P6MXW1_9EUKA	1.270e-23	26.05	Cohesin subunit SA-1 n=1 Tax=Planoprotostelium fun...	[more]
A0A5C6MJK5_9TELE	1.630e-23	25.36	DNA helicase n=1 Tax=Takifugu flavidus TaxID=43368...	[more]
A0A6I8RR30_XENTR	2.400e-23	26.15	Stromal antigen 3 n=5 Tax=Xenopus tropicalis TaxID...	[more]

Pages

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
E-siliculosus-1a_F_contig1074	contig	E-siliculosus-1a_F_contig1074:23076..34860 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90	2022-09-19
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female	2021-02-24

Properties


Property Name	Value
Start	1
Stop	0
Cds size	1176
Model size	1951
Exons	14
Hectar predicted targeting category	other localisation
BRITE	ko00000,ko00001,ko03036
Best eggNOG OG	NA\|NA\|NA
Best tax level	Eukaryota
COG Functional cat.	D
Ec32 ortholog	Ec-20_001380.2
Ec32 ortholog description	Sister chromatid cohesion complex Cohesin, subunit STAG/IRR1/SCC3
EggNOG OGs	COG5537@1,KOG2011@2759
EggNOG free text desc.	chromosome segregation
GOs	GO:0000003,GO:0000070,GO:0000228,GO:0000278,GO:0000280,GO:0000785,GO:0000790,GO:0000793,GO:0000794,GO:0000798,GO:0000819,GO:0003674,GO:0003682,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005694,GO:0005737,GO:0005829,GO:0006996,GO:0007049,GO:0007059,GO:0007062,GO:0007064,GO:0007127,GO:0007129,GO:0007135,GO:0008150,GO:0008278,GO:0008608,GO:0009987,GO:0010789,GO:0016043,GO:0022402,GO:0022414,GO:0022607,GO:0030892,GO:0030893,GO:0030999,GO:0031619,GO:0031974,GO:0031981,GO:0032991,GO:0034990,GO:0034991,GO:0043060,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0044085,GO:0044422,GO:0044424,GO:0044427,GO:0044428,GO:0044444,GO:0044446,GO:0044454,GO:0044464,GO:0045132,GO:0045143,GO:0045144,GO:0048285,GO:0050000,GO:0051177,GO:0051179,GO:0051234,GO:0051276,GO:0051303,GO:0051310,GO:0051311,GO:0051316,GO:0051321,GO:0051455,GO:0051640,GO:0051641,GO:0051649,GO:0051656,GO:0061982,GO:0061983,GO:0070013,GO:0070192,GO:0071840,GO:0098813,GO:0140013,GO:0140014,GO:1903046,GO:1903047
KEGG Pathway	ko04110,ko04111,ko04113,map04110,map04111,map04113
KEGG ko	ko:K06671
Preferred name	IRR1
Seed eggNOG ortholog	2880.D7G0R2
Seed ortholog evalue	4.2e-209
Seed ortholog score	733.8
Taxonomic scope	Eukaryota

Relationships

The following UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1622927575.4147627-UTR-E-siliculosus-1a_F_contig1074:23075..23102	1622927575.4147627-UTR-E-siliculosus-1a_F_contig1074:23075..23102	Ectocarpus siliculosus Ec863f_EcPH12_90f female	UTR	E-siliculosus-1a_F_contig1074 23076..23102 +
1696318593.6415393-UTR-E-siliculosus-1a_F_contig1074:23075..23102	1696318593.6415393-UTR-E-siliculosus-1a_F_contig1074:23075..23102	Ectocarpus siliculosus Ec863f_EcPH12_90f female	UTR	E-siliculosus-1a_F_contig1074 23076..23102 +
1622927575.4315987-UTR-E-siliculosus-1a_F_contig1074:24360..24590	1622927575.4315987-UTR-E-siliculosus-1a_F_contig1074:24360..24590	Ectocarpus siliculosus Ec863f_EcPH12_90f female	UTR	E-siliculosus-1a_F_contig1074 24361..24590 +
1696318593.6510887-UTR-E-siliculosus-1a_F_contig1074:24360..24590	1696318593.6510887-UTR-E-siliculosus-1a_F_contig1074:24360..24590	Ectocarpus siliculosus Ec863f_EcPH12_90f female	UTR	E-siliculosus-1a_F_contig1074 24361..24590 +
1622927575.4454517-UTR-E-siliculosus-1a_F_contig1074:25282..25574	1622927575.4454517-UTR-E-siliculosus-1a_F_contig1074:25282..25574	Ectocarpus siliculosus Ec863f_EcPH12_90f female	UTR	E-siliculosus-1a_F_contig1074 25283..25574 +
1696318593.6582246-UTR-E-siliculosus-1a_F_contig1074:25282..25574	1696318593.6582246-UTR-E-siliculosus-1a_F_contig1074:25282..25574	Ectocarpus siliculosus Ec863f_EcPH12_90f female	UTR	E-siliculosus-1a_F_contig1074 25283..25574 +
1622927575.4618888-UTR-E-siliculosus-1a_F_contig1074:26659..26747	1622927575.4618888-UTR-E-siliculosus-1a_F_contig1074:26659..26747	Ectocarpus siliculosus Ec863f_EcPH12_90f female	UTR	E-siliculosus-1a_F_contig1074 26660..26747 +
1696318593.665549-UTR-E-siliculosus-1a_F_contig1074:26659..26747	1696318593.665549-UTR-E-siliculosus-1a_F_contig1074:26659..26747	Ectocarpus siliculosus Ec863f_EcPH12_90f female	UTR	E-siliculosus-1a_F_contig1074 26660..26747 +
1622927575.471621-UTR-E-siliculosus-1a_F_contig1074:27562..27700	1622927575.471621-UTR-E-siliculosus-1a_F_contig1074:27562..27700	Ectocarpus siliculosus Ec863f_EcPH12_90f female	UTR	E-siliculosus-1a_F_contig1074 27563..27700 +
1696318593.672826-UTR-E-siliculosus-1a_F_contig1074:27562..27700	1696318593.672826-UTR-E-siliculosus-1a_F_contig1074:27562..27700	Ectocarpus siliculosus Ec863f_EcPH12_90f female	UTR	E-siliculosus-1a_F_contig1074 27563..27700 +

The following CDS feature(s) are a part of this mRNA:

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
mRNA_E-siliculosus-1a_F_contig1074.525.1	prot_E-siliculosus-1a_F_contig1074.525.1	Ectocarpus siliculosus Ec863f_EcPH12_90f female	polypeptide	E-siliculosus-1a_F_contig1074 27701..34860 +

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at E-siliculosus-1a_F_contig1074:23076..34860+
coding sequence from alignment at E-siliculosus-1a_F_contig1074:23076..34860+

protein sequence of mRNA_E-siliculosus-1a_F_contig1074.525.1

>prot_E-siliculosus-1a_F_contig1074.525.1 ID=prot_E-siliculosus-1a_F_contig1074.525.1|Name=mRNA_E-siliculosus-1a_F_contig1074.525.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=392bp
MGGGGAENGLMEAVLRNDTALSSVVSDWVSSYKEDSDKAMKELLNFVFLA
CGAPSTEGPYGPPADVSVIEMDGEQWAELLKVVIEDMQGQPGTKGVPSFP
LAPAAKGKSGKPARIFRSNYCEVFNRLAEACRRGDDHDASTLEAVVGMLV
ALSSHSASQDIRLAATLAGMEMGLGVAEELAGLHEKLGLSERQLEAAKSS
AGKGGGKKAAEKSRKIQGLESQVERIFSATETLTTVSDLVFSKITQKRYR
DVSPLIRSIALEGLSKIMLALPEFYVQDKLMRYHGWSLNDKNPAVRVLAL
QSIQRLLRDPASSARLEKFSAHFFSRVKAMIQDVDNTVAREAGVALRLML
SNGFLESIERADEMDIEAGIFEEGLGLPARTECMGFFVDGIQ

mRNA from alignment at E-siliculosus-1a_F_contig1074:23076..34860+

Legend: UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_E-siliculosus-1a_F_contig1074.525.1 ID=mRNA_E-siliculosus-1a_F_contig1074.525.1|Name=mRNA_E-siliculosus-1a_F_contig1074.525.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=11785bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1074:23076..34860+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
CACAGCAACGAGGAGCTGGTGCATCAGGTAAGAAGAGGGAGAGCCAGCCA
TTCCCTATATGTCTTGTTGCTTGGCCATCAGGTGTCGGCGGTGCTTGATT
GCCCTCTCCTTTTCCCCGCACTGAGAAACATGGACTCCATTTTCAAAATT
TTGCCCAGAGAGAGCGAGTTGTACATAGCAACGCCACACGGCGGTTGCAT
TGATTGGGGTTGGAGTATGGCGTCCAACCGCCCAACCTGTTCTTTCTCGA
TCGGTGTCTTCCCTTGTTCTGAACGTTATTACCCTCGTCTTTTTGCAAAG
CGAAAGGAAATGTGAAAATCATACATACCTGATGGAGTACAGCGGTCAGT
AGATAGATACACATCTAAACATGGTTCAGATTTCAAATCTCATGGGTGGA
TTCAAATTACGGCACATGAGAGAGACCAGGTATTGTAAGGCATCTGAACG
AATTCGTTGCTCGTGCACCCACCGTCCGCAGCAGTCTCAAAGTTGTAGTC
TATCGTACGTATCGACACGCCTATTATAGCCTCGAAGTACCGACACTTCT
GGCCAAAGCTTCCGGGCATGTCGTTGTTTGCAACACAATCTCACAGCTTT
GTTTGGTGGCCCATTATTGATCGATCGATCCCCCCGCCGGCGGTTGACTG
CTGCTGTGGGTCTTTTTTAGAAGGAAGGAAATATAATCTCACAGAGAGAC
TATGCTGCCCGTTCGAGATAATAATAATAATAATACCCACAGCAGTCTAA
AGGGAGGTGTTGACTACAGTATGCTGTCGACTGGTGTTGACGCAGTGTTG
CACTCGCACACCCCTTTGACTTCGACTGTAAAAGCGCGCGCCATCGAAAC
ACGCATGAAGAGAGAGAGGGAGAGAGAGGAATGACGTCCCTTGCGCTCCA
AAAGGCACAGGCTCTACACGGCGGCTCGTAGTTGAACTACACAGCAGTAC
ATGCAACCCGTGCCGATCAAGATGTGCTGAATAGCCTTACAGCAGTACAT
GGTGCATGGTAGACTTCTTCGAGTACAAAACCACGTCTGCCGTGAATTCG
ATACCTTGATGGTGTCTCCCAGACACACAGCATTTGCTCGAGAATGTGCT
CCCAGGCTCACCTCCAAGTCAAGTGGCCCTGACTGGCCACGGGGGTATTA
CAGCCAAGTGCACTAGAGGAGGGGTAACAAGGGCGGAGACGTTGTAGAGC
GACGCGCACTCGACAACAAACAGACTCCCCATGCACCAGGCTAACCGCCG
CCGCCCCTTTAAACCTTGTAACGGCCCGTTCATAGGCCCGTTACAAGGCG
GCAGCACCAGAGAGGGAACGATCGCAGTCGGCACAACGAGGGAGGAAGAG
CAGAGAGACGAGTGAAGCGCACGAGATACACAAGAAGCAGGCTTGTATCT
ACCGTCCGAGGGAGAGAGGATGACCGGTAGGGGTAGCAGCGGTCGGGTGC
GGAGGAAGCCCCAGACGGTTTACGACACCGCCCCCCTAGCGTCCGAGGAG
CAGCTGTCTCAGCAGGTGAGCTCTCAGTCGGCAGACAGCACGCGGAGGTC
TTGATAACGTTGTTGTTGATCGGCGTGTCGTGTTTTGTTTATACCAGTGC
ACCAGCACCAGAGAAATAGCCCAAACCAGCCCCCCCCCCCCCCCCCCCCC
CCCCCCCCCCCCCCCCCCCCCGGGCCGCCCGGGGGGGAGGGGGGGGCGGG
GGGGGGGAGAAAAAAGAGAAGAACCTGCGGACGGGGCGGGGACAAGTCGC
ACCATGACCAGTTTGCGGGCGTATCGGGATAAGGTGGTGGCGTGTTAGTG
AAATAAAACCTTGAGATCTCATGGGCTACGTGATGTCTTCACCTGCCGTT
TGTGCGCACGTGTGGGTACGTGCTCTCCTTCGCCGGGGCCCCCCGTCGCC
TTGGAGGCATCAGATCAGGGCACGCCGAACAAAAATATCATCTGCGTTTT
TTCTTGGGGTTAGGGTTAGGTGGATGATCAGAAAAGACGTGATGATGCCT
AGCAAAATGTAGCGGACGACAAAAATAGACAGACAGGCTCAAGAGGCATC
GAGAGAGAGAGAGAGAGAGAGAGAGAAGAGAGAGAAGAGAGAGAGGATGA
TGTGGCGGCAGGCAGATGATACGCCTGCCTGCTGCTGTTGGCGCCAACAT
ATTGTCGTTATTCCTTACCTCGTATTTCGTTTCTCCCCGTTCCGACATAG
AGCGAAGACGAAGGAAGGACCAGGACTGCTAGCGGCGGCCGGCGGCCCAA
CAAGAAGCAGAAGACGGCCGCTGGCACGCACAGGGCAAAGACGACGGCGG
CGGCAAAGGGGAGGGGGCGGGGCGGAGCGAGAAAATCGCGTGGCGGCGGC
GGTGGCGGCGGCGGCGGCGGCGGCGGTGGCGTCAGCAGTGACGACGGCCG
GGCTTTAGGGGAAGAGCAGGAAGAGGGGGCAGAGGAAAACGAGGGGAAGG
AGGAGGAGGAAGAGGAAGATCCGCAAGAGAAGCCGGCGTTGGGAAAGAGG
TGCGCCGCCTGTTTTTTTTGCACACGTTTGTGCCTTCGGGCGGAGAGGGG
CCAGTGAGACGGCGCCCCCCCCCTCACGGCGGTCCTCCGCTCGTCGCGTT
GTGATTCCGCTGCTGCTGTGAAAGGAGGGGAGGAAATGGAGAAGGAGGAG
GAGGGATGGAGCAGGGTTTCCTACAGATTGCAGTCCTGCTTTTGGAACAT
TGGCCTGTGCGTGACGCTTGACCACCAATCCTTGTCCTTGCCGTCTTGAG
CAAGAAAAGAGGCGTTTTTGTGTTCGCTTGCGGGGCAAGGGGGTGGTGCT
CTGCGAACACATGTGAAGCACGTACGCTGCTGTGCGGGCGGGCTCCGTGT
TGTGTGTGTTGCTATTGTCGGGCTTAGGGGGGCGTTTCATGCGGCACCAG
GGAGGCATGTGAACGTCTGCTTGCGAAAGAAGACGGTTTGGTGTGTCGGA
GAGGTGTGTCTTGAAGACGCGCTGCGTGTGCGCTCTTGGGGCGGATTGTT
GGTTTTCTCCTTTCGTTTGTTGTGGTCCAGACACGGGGCCCCCGACCCAA
GACCGGTACTAAACCAAGTACAATGGGCGCCCCCATACTAAAACCATAAC
AACAAGAGACCCATACCAAATCCTATATACACTTGAGGCCCCCATAGATT
GCGACATGACCCCCCCCCCAGGAATCTCGACGTCCAGACACGAGATCCCC
AGCCTCTCTGTGTGGCTGTTGTACACTGATTGTGTCGCCGTTCGCTGGCT
GCCTGGTTGCCGTGTCTCTCACTCGCCCCCCAAATTTCTCTCCCCCTCTC
TCCTTCACGAGCTAAGTTGTTCCATCGCAGAATATCTTCCTCCATTTTCG
CGTTTCCGCACAAAAAGAGAAAAAGATCACGTGCTCGCACGAACCATTTA
TTACCGACCACGCACCCTCTCTCTCGTTCTATCATACATGGACACATATT
TTCCAGCCCTATCAAATCTTCCGCTCAAGAACCTCGAGGTCTCTCGAACG
TACTCACTCAAACGCTAGCTAACGAGCTTCACGTTTGTTTTTTGTGTGTG
ACCGCTATCCTTGCCCGTTCTGCCCTCTTCCGAGCAGAAAGAAGCCCGCC
CGCCGCGCCTCCGCGCCCCCGGCCCCCTCCGGGAAAACCGTCTCCCGGGG
CGCAAAGAACACCGGGGGCAAGGTGTGCGCCTGTTCCGTTGCCCTTCATT
TCGTGTGCTTGTTGTGTGTTCATGGGCGTGAGTTTTCTCAAGTCTAGGCT
CCATGGCTTTTTTTTTGTGGTGATTACCGGCCGGTTCCGATGTTCTCGAG
GGGGTTTCGTGGTCTTGTTAACTTGAGGGACTGACCTGCTGTTGTTGGGA
GCATTAATTTCGTCTGCTTCCCTCCAAGAAAGGAAGTGTGCAGTATTTTC
AGGTGTTCTGCTGTTGCAGGATGGTGTGCATAGCCTTTTCTTGGTCCTGG
GGTATTTCAAAATGTAGGAAGGGGTTCTCGATCAATCCTCTTGACGGCCA
TCGCGCTCAAACTCGTCCATGTAGCGCGCCGGTCCCAATGGTGTGCCCCC
CCCCCCCAAACGGTGCCATCTAGTTCGAAAGGTTATTATGTTTCTTATTA
GAGGAGCGCCTACGGAGGGACAGAAAGCAGCTGGAAGCAGGAGCTCTTGT
CCAGAAATTTTGTTTCTGCGTTTCTTGATAAGTGCATCCGTTTTTTAGTC
CGCGTGTGAAGAAGCCTTAGCCCTTGTCTCGTCTCCCGCGTTCTCGGAAA
GAGTGTCTGGCCGCATGTTTGCTTTGAGTTGGTGTTGACGGTAAATAAAT
ACCATCACTGAACGGTTGCTCTCGGCACGGGGGGGCTCGGGACAACATGG
TCCCACTCCTTCCTTCATTCCACCATCAGAATACATCTTCCGTCCATCTG
ACGTTGATTTTCCCTGCTGCAACGTCGTTTTACTACCACCTTGTTTCGTT
GCTGTTGGTGGGTGGATTGTTTGCCTGTGTGCCCCAGAAGAAGGCGAGAG
GGCGCAAGTCTACCGGCGGCATCCCCACCTCCCGAAAGGCTGCGACGACA
TCAGCAGCACAAGCAGACGGCGAAGAGAGCGAGGGAGAAGATGGAAACGT
CTTGGGAGGAGCAGTCGGCGGCGGGATGGGCGGGGGAGGGGCGGAGAACG
GCCTCATGGAAGCGGTGCTCCGCAACGACACCGCCCTCTCATCGGTAGTG
TCTGACTGGGTAAGGGTAAGGGTAAGGGTATTGTACGCTACACTGCGGTC
TGCGGGTGCCCCAACCAAAGGGAAGCGGTCGAGCCCACGGCACCCACCCA
AGGGACGCGTATCCCTCTGCCGTGCTGCCGCTTGCCATTCTCTGGCGCTA
CCCTGCTTTTTTTCGGTTGTTGGCGGCTCCTATCTCAGCGCGTGTCGTCC
ATGAAGACGTTGTATAGTTGTCCGTCCATGTATATACTCGGGTATAAGCA
GCATACATGTAGGTTAGTTGCTTAAGACTTGAGAGCATGCCCGATTTCGT
ATTCCTTCTTTTCCATGGGCACGCGCGCTTTGTGCAAGTGTCGATCTACA
GGAGGACGGTCTACAGGAGGACACTACATGCTTGTGTGTTTTAATTGCTG
AAAAGCATGCCCGATTTCGTGTGTGTTGTTTGTGCATGCTTTGTGCAGGT
CTCTAGCTACAAGGAGGACAGCGACAAGGCCATGAAAGAGCTCCTCAACT
TCGTCTTTCTCGCCTGCGGAGCCCCCTCGACGGAGGGTCCCTACGGGCCG
CCCGCGGTAATCGAATTGTTTCTTTGTGGTATGTCTTTTTGGGATTTTTG
CTGCTGTTGATAGCACGCGAAACCGTACCAAAGCCCTTTGTTTTTGGTCC
AAATATTTCCCGTCTTTTCATTGCTGTATATTTTAGGGTTTGCTGCTGTT
GGTAGCACGCGAAACCGTAAATAGCTCAGTTGTTTTCGTCTAAAACAATC
CTCCTTTTTTGATTCCTTATTCTCTGGGTGTCCTTGTTGCTGGGGCTCTT
CCCATGGCAGGACGTGTCCGTGATAGAGATGGACGGAGAGCAGTGGGCGG
AGCTGCTGAAGGTTGTGATAGAGGACATGCAGGGGCAGCCCGGAACGAAA
GGGGTACCCTCCTTTCCCCTGGCTCCCGCCGCAAAGGGGAAGTCCGGAAA
GGTTTGTTCGTTATTACAGCGTGGGGTTTGCAATTTTTGGTGTTTGGTAG
TGACGGGGGGGGGGGAGGTATCCGTCGCCCGAGCCACCGCCGGTGCTGCA
GGCTGCTCACCTTGACGAAAACCATACCATCTACAATGGAAAAAGCTCGT
TTCCACCCAACCTCCACCCGTTTTTTGCCGCTGAGACCACGTCGCCAAGC
CCTTCGTCACCGCTGGTACTCCTTCAAGAAACCGCGGGTTGCTGTTATAC
GAATGAAACCAGTAGAGAGACCTCTAGCACGCCACTTCCATTGTCGCGCG
CAGATAAAAATGAGTTGGTATGTGGCACGGTTTTTGTTCTAAACCGGGCA
GATGACGTGTCCTTATACGTACAAGTACTGTAGATACAGTTGCTGCTGGT
GCAAGCCTCGTGTCACAGCTCACGGCACCAATTCACGCGTCCCATGAGGA
TCGAAATAGTTGACGAACTCGCTCGATAATTTGCCAAACAATTCTCCGTA
CCAGTCCGACTTTCGGGTACAATTAACAATGAAGAGAGTGAGGTTTCACT
CGCCTGCAGCGCGGGGTGAGCGTGTGGGGTTGCTCGCCATGTCCTCGGTG
AAACCGGAGCAAACGTCAACCTCGGTGGTGTCGGTGTCCAACCGTGCCCC
CCCCCCCCCCCCCCCGCCCCCCCCCCCGCCCCCGAGCAGCCCGCGGCGGG
GGCCGGGGGGGAGGGGGCGGGGGNNNNNNNCACCCCCCCCCCCCCCCCCC
CCCCCCCCCCCGCAAAAAAAAAAAACAGCCGGCGAGGATCTTCCGTTCAA
ACTACTGCGAGGTTTTCAACAGGCTGGCGGAGGCGTGCCGGCGCGGGGAC
GACCACGACGCGAGCACCCTCGAGGCCGTGGTGGGGATGCTGGTGGCCCT
CTCGAGCCACTCGGCTTCGCAGGACATTCGTCTCGCCGCAACTCTGGCCG
GCATGGAGGTGGGTGATTGTTTGTTTTTGATCATCAAGTGCTGCTGCTGT
CGTGTTTTTTTTTTTTTTTTTCTTGTACGAAAGCACAACGAATCGATCTC
TATGCACAGGTTGGGCCGGCATGGAGGTACATGTAGGTGATTGTGCGTTT
TGTCGTGTGTGTGTTTTTTCTTGTTCTTCTTCAAAAGCGCAACGAATTCA
TTCATCAACTGGTTGGGTGCATATGTTGGTCATGGTTTGTGTGTTGCGGT
GGAGTCGAAAAGTGTGTTGCTGTTCACGCGTCCCCTTTGTGCTTGTATTT
TTTGTGGTACAAGTACTGTATCGTGCTTGTATTTTCAACCCCGTCCCTAA
CCTACAGTAGGCCGGCGAACCCGGCATATCGCTCCGTCTCGGCGTTGTAA
GGATGCGAGACCAATGGTCTAACTACTACGCCATGCGCTCACATAAGTAC
AACCCCCCGTCCCGCCCCGTCTCATCCCGTCCTGTCCCGTCAGATGGGCC
TCGGCGTCGCGGAAGAACTCGCGGGTCTTCACGAGAAGCTTGGACTCTCC
GAGAGACAGCTGGAGGCGGCCAAGTCGTCCGCCGGCAAGGGGGGGGGCAA
GAAAGCCGCGGAAAAATCCAGGAAAATTCAGGGCCTCGAGAGCCAGGTAC
AGCTCCATCTCACTCCCATGTGATTGAATGGCGTTTGCCGGAACGGTACG
GTAGGGCGCGGTACGGTGGGTGCGGTGCGGTACCTTCCTTTTGTGGCGGA
CTCGATTCCATACAGATACAGAAGCAATATGTATATCCTTTGATCTTGTG
GCGCGCGGCAGAATGCTATGGTGGTGTGCACGATGACTTGTTTCGTTCCG
GGGCGCGATGTACGATACGGTGCGGGATGGCAATGGCTCTTCGAATTTTT
TTGCACCGAGGAGCTTCTGTCTCTTTCTTCTCTCAAACAGCTTCGATAGA
CCAAAATTACTGACATCTGCAGCTCAGGCCCTGACTCCGGCTTCTCAGAG
CTCGCTGTCCCTACTACATGTGCGAACCCCCCCCCCCCCCAAAGTCTACC
ACGTGGGTTCACAACAACTTTACCCCCCGCTCTTTGATGATGCGCTATGT
ATGCTTATCCTTGGCTGGTACAGGTGGAACGTATCTTCAGCGCCACGGAG
ACACTCACGACGGTGTCTGATCTGGTGGGTGCCTATGCAAATGGGGCTCA
GTCCACCCACGTAGGCTATATCCTGCGAGCACAAGCCCTTGATATTTACT
CTTTTGGTAATAGTCGCACTGTAAGATGTGGTATTCTACCTGTTGCGACA
GCTGCTACGGAAGAGTCGTCTCGGGTGCGCGTTGTCGCCGTTTAGTTGTC
TCTGCTGATCACCGGCTTGAATGATATATATATACATGGCATTCGGAAAT
ATGTCGTATACACAATGCTGCTGGTCCTGCTGCCACCGCTACAATCAGGC
AAACAAACGCTCTCGCGTGTTGTGTTTTGCTTTCCCGTGTCGGCAAGCAA
GCCTGTTTTTTTTGTGTATCCCTTCGTTCAGTATTACAGCATCTTGGTTT
CCCACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGTTGGTG
TTTTCGAAGATCACCCAGAAGCGCTACCGCGACGTGTCCCCGCTTTTCCG
TTCGTTCGCTTTTGAGGGNNNNNNNNNNCGCCCACCCGGCGTGTTTTTTT
CTTCTCCCCCCTCGTTCCGTATTCCAGCCTCTTGTTTTCCCTTTTTTTTT
TTTTTTTTTTTTTGCGGCGTTCTTGTTCTGGCAGGTGTTCTCGAAGATCA
CCCAGAAGCGCTACCGCGACGTGTCCCCGCTTATCCGTTCGATCGCTCTC
GAGGGGCTGAGCAAGATCATGCTGGCTCTACCGGAGTTTTACGTGCAGGT
ATTGTACCTACACGTAGGTTCCTGTTTCGTTCTCGCAGGATGAGTGAGCG
TTCTTCGAGCAAAGTATAGGATTTAGTATGAAGTACACCCTACAGTGAAA
ACAAGAGTGGGGCCGTCGTAGATTCGAGGCGACTGATAGGCCGGCAGGTG
AAGCCGTGTGGTATTTCTTCCGTCTTGGTCCGCGGCTTTTCCCAAACACC
CGACGAGAAAGAGATGGAAGCTAAGATTGTTGCAGTACTGCTGTAGACAC
GGAACAGATTGACTTGACGGTTACGGTGTAAAGGTAAGAGGTGCATTGTT
GCTGGAGTTTGTTTTTGTGAATTTGAAGCTAGGGGTTGTTGGCTTACACG
AAACAAACTGACTTGGATATGAATTGCAATTGCATTGTAAATACTGACAT
TTGTGTTTTTTTTTGGCCGTGCTACAATCGACGACAAGAATGACAAAGGA
AGGAAGTTAATTGGACTCTTGTTGGTCGCGCTCGCTGTCGCATCCCCCAG
GACAAGCTGATGAGGTATCACGGCTGGAGCCTGAACGACAAGAACCCCGC
CGTCAGGGTACTCGCCTTGCAGGTAGCTGATTGGTTGATTGCCGACCTAC
CTGCCTTGCAGCCAGAACCGCGCTTTTACGGGAGAGGTCTTGTGCGTAAT
ATAGCGTGTTCTTTCTTTTTTTTTTTCTTGCAAAACTATAACAAAGTTCA
TCTCGATTCACTCATACAAGAAGTCAGGGTAAGCCAGCAAAATACTTCAT
AGGGTTTTGTGATCACCGACCTGTCGAGGATAGTTCGGCAAACCTGGGGA
TACCATGGACTCGTGTCGTTCGGTACTGAACTGTACTGTATATATTCTCT
TGAAAATATTTCATCGCGTGGGCGGTACGTTGGGCCTTCGTCACCTACAT
ACCAGGTGGCTTTGGTATTGTTTTAAGGCGGGTGGAATCATGACGTTAAA
AAAGTGATGTACACGCTATGGGCCATTGGGTCATGTCTTCGAATACAAAG
TACCACATACTTACGAGAGCAATCTGAACAGCTGGGGGAGTTCGAAGTAG
CTACCCATGGTTCATTCCCACCCTTTGACGGCGATCCATTCCAGTGCGGT
TGAATAGTTAGACGTAGCGCGGGCATTGTATGTACGCCCAGCTCATGCCA
ATGAAGACGAGATCAGCGGAGATAAATTGCGCTGGAAACATATCCTTCGA
ACCTGCCGTGGTATTAACCTGTAGGGTTGGATGACGTTCTGCATTGTTGC
ATCAACTTTGTGTGGGATGCACGTCCGTGGGGGAAGATCGTTCGAATTCG
CCGTGACAGCAGTTCATTGTAGGCAGACCGGTGCGAAGTTTGTTTGTTCT
GTTGAGAAAATATTTTCGAACCCGCGGTAACAACTCGTTCAGGACGGGTT
GTACATGTTGTTTTGTCCATTTTTGCAACTTTTGGGTGTACGTTCACTAT
GTTGAAGGAAAGTAAATCCAACACGGCGATGGTGGTTCATTTCGCACCTT
GTACATAGAGCTAGCCGAGATAAGGGTTGTGAGCTTTGCTTCGCCTTTGC
ATCTGTCGGCGGGACTCATTTACTTCAGGGCAAGCGAATTCAACACGGTA
GTGATTGTTCGTTTAACGAGGCGTGATCGACTCCTTCGACTACCCGGAGT
GACGACTCCTTCGACTACCCAGACGATTCATTCGCCTACCCGGACGATTC
ATTCGACTACCCGGAGTGACGCTTTATTCATTCCCGCCTTGAAGGTTTAT
TCATTCCTTGTGTGCATGCACAACGATGGCACCTGGTCCGAAAAACCTGG
CACACTATTGTACATTCATCAGTTACCCCGTGTTGGCTGGTACGGGAGGC
CCCGATGACAGGAAATGAAACCCGTTCGTGTTGCCGGCAGCCCTTTCAAT
CTACTCTACTCTACTGTAAGCGAGGCTAACTCTACGAATACTGTACGTGG
GGCTGAACGGGGATAGGGATGACGGTATCTCGATACACCAAAACGAAGAT
AGCGGGCACCAGAGATATGAATATGCCTTGCCAGGCTAATTTCCGGGTTT
TGGTTTTGAGACTATTTAGCTCTCCTCACATTTGTATTCTGCTTGTTTTT
CTTTACTTTCTTGCATGGTTTGACTGCATTCAAACGGTTTCGCGTGCCTA
TTACTCTTTCAGCTTGGCATTGTGTTCCCCGGTCTTGTCCGTCTTTGCTG
CGTTTTCGATTCACGATGTATTTTCCCGTTGGTGTTTTTTTTTTTTACGT
CTGATGTACCGCAGTCGATCCAGCGACTTCTGAGGGATCCGGCATCATCG
GCTAGGCTGGAAAAGTTCTCGGCCCACTTTTTCTCGAGGGTCAAGGCCAT
GATCCAAGACGTGGACAACACCGTTGCCAGGTATGTAGTCTTCGACGGCA
GGCTACCTTGCTACCAATTTGTCTGTCTGTTTGTCTGTCTGTCTGTCTGT
CTGTCTGTCTGTCTGTCTGTCTGTCTGTCTGTCTGTCTGTCTGTCTGTCT
TTCTGTCTGTCTGTCTGTCTGTCTGTCTGTTTGTCTTTGTCTGTCTGTCT
GCCTCTGTCTGTCTATTTGTCTGTCTGATTGTCTTTTTCTGTCTGTCTGT
CCATCTGTGTGTCTGTATCGGCATTCCTCGAGTCGAATGTTGCACGATTC
GTGTGTTCTAGGCATCGTTGTTTGTCTACGTGCACGTCTGCACCCTGTAG
AGCAATGTCAAAACACGATGACGGTGCCCATGTAGTTGGAGTTCTCGTGG
TTGGTTGCAGCAGCGGCTGAGAGTTTCACAACTGACGCGCATGGTACAGC
ATAAGATGGACGACACATACACCCTTTCATGAGCGTCCCTCATGCAAAAT
GAATCACTCCTCTGTTTTTCTTGATCGTGCGCACGCTTCATGTCATGAGT
GCAATATCTTGGTATTGAGGCTGCGAATCCTGTTGATCAGGGCTTCCTCT
GATCGTGCAAGAATGGTCTGATCTACGTATTATCTGCGGACATCTATGTA
TGTATATGCTTAGCCGATCGACTGTGGTGACTTTGATCCTGTCGCTGTAA
ACACTCTCCCGAAATATTTTCTTGTTAATGCATATTTGGTACTTACCAAC
GGCCATTTTTTTTTGTTTGCTTCTTCAGGGAGGCTGGTGTCGCGCTGAGG
CTGATGCTGTCGAACGGTTTCCTGGAGAGCATCGAGAGGGCGGACGAGAT
GGACATCGAGGCGGGCATCTTCGAGGAGGGCCTTGGCCTGCCGGCGAGGA
CCGAGTGCATGGGATTCTTCGTCGACGGGATACAG

Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig1074:23076..34860+

>mRNA_E-siliculosus-1a_F_contig1074.525.1 ID=mRNA_E-siliculosus-1a_F_contig1074.525.1|Name=mRNA_E-siliculosus-1a_F_contig1074.525.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=2352bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1074:23076..34860+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
ATGGGCGGGGGAGGGGCGGAGAACGGCCTCATGGAAGCGGTGCTCCGCAA
CGACACCGCCCTCTCATCGGTAGTGTCTGACTGGATGGGCGGGGGAGGGG
CGGAGAACGGCCTCATGGAAGCGGTGCTCCGCAACGACACCGCCCTCTCA
TCGGTAGTGTCTGACTGGGTCTCTAGCTACAAGGAGGACAGCGACAAGGC
CATGAAAGAGCTCCTCAACTTCGTCTTTCTCGCCTGCGGAGCCCCCTCGA
CGGAGGGTCCCTACGGGCCGCCCGCGGTCTCTAGCTACAAGGAGGACAGC
GACAAGGCCATGAAAGAGCTCCTCAACTTCGTCTTTCTCGCCTGCGGAGC
CCCCTCGACGGAGGGTCCCTACGGGCCGCCCGCGGACGTGTCCGTGATAG
AGATGGACGGAGAGCAGTGGGCGGAGCTGCTGAAGGTTGTGATAGAGGAC
ATGCAGGGGCAGCCCGGAACGAAAGGGGTACCCTCCTTTCCCCTGGCTCC
CGCCGCAAAGGGGAAGTCCGGAAAGGACGTGTCCGTGATAGAGATGGACG
GAGAGCAGTGGGCGGAGCTGCTGAAGGTTGTGATAGAGGACATGCAGGGG
CAGCCCGGAACGAAAGGGGTACCCTCCTTTCCCCTGGCTCCCGCCGCAAA
GGGGAAGTCCGGAAAGCCGGCGAGGATCTTCCGTTCAAACTACTGCGAGG
TTTTCAACAGGCTGGCGGAGGCGTGCCGGCGCGGGGACGACCACGACGCG
AGCACCCTCGAGGCCGTGGTGGGGATGCTGGTGGCCCTCTCGAGCCACTC
GGCTTCGCAGGACATTCGTCTCGCCGCAACTCTGGCCGGCATGGAGCCGG
CGAGGATCTTCCGTTCAAACTACTGCGAGGTTTTCAACAGGCTGGCGGAG
GCGTGCCGGCGCGGGGACGACCACGACGCGAGCACCCTCGAGGCCGTGGT
GGGGATGCTGGTGGCCCTCTCGAGCCACTCGGCTTCGCAGGACATTCGTC
TCGCCGCAACTCTGGCCGGCATGGAGATGGGCCTCGGCGTCGCGGAAGAA
CTCGCGGGTCTTCACGAGAAGCTTGGACTCTCCGAGAGACAGCTGGAGGC
GGCCAAGTCGTCCGCCGGCAAGGGGGGGGGCAAGAAAGCCGCGGAAAAAT
CCAGGAAAATTCAGGGCCTCGAGAGCCAGATGGGCCTCGGCGTCGCGGAA
GAACTCGCGGGTCTTCACGAGAAGCTTGGACTCTCCGAGAGACAGCTGGA
GGCGGCCAAGTCGTCCGCCGGCAAGGGGGGGGGCAAGAAAGCCGCGGAAA
AATCCAGGAAAATTCAGGGCCTCGAGAGCCAGGTGGAACGTATCTTCAGC
GCCACGGAGACACTCACGACGGTGTCTGATCTGGTGGAACGTATCTTCAG
CGCCACGGAGACACTCACGACGGTGTCTGATCTGGTGTTCTCGAAGATCA
CCCAGAAGCGCTACCGCGACGTGTCCCCGCTTATCCGTTCGATCGCTCTC
GAGGGGCTGAGCAAGATCATGCTGGCTCTACCGGAGTTTTACGTGCAGGT
GTTCTCGAAGATCACCCAGAAGCGCTACCGCGACGTGTCCCCGCTTATCC
GTTCGATCGCTCTCGAGGGGCTGAGCAAGATCATGCTGGCTCTACCGGAG
TTTTACGTGCAGGACAAGCTGATGAGGTATCACGGCTGGAGCCTGAACGA
CAAGAACCCCGCCGTCAGGGTACTCGCCTTGCAGGACAAGCTGATGAGGT
ATCACGGCTGGAGCCTGAACGACAAGAACCCCGCCGTCAGGGTACTCGCC
TTGCAGTCGATCCAGCGACTTCTGAGGGATCCGGCATCATCGGCTAGGCT
GGAAAAGTTCTCGGCCCACTTTTTCTCGAGGGTCAAGGCCATGATCCAAG
ACGTGGACAACACCGTTGCCAGTCGATCCAGCGACTTCTGAGGGATCCGG
CATCATCGGCTAGGCTGGAAAAGTTCTCGGCCCACTTTTTCTCGAGGGTC
AAGGCCATGATCCAAGACGTGGACAACACCGTTGCCAGGGAGGCTGGTGT
CGCGCTGAGGCTGATGCTGTCGAACGGTTTCCTGGAGAGCATCGAGAGGG
CGGACGAGATGGACATCGAGGCGGGCATCTTCGAGGAGGGCCTTGGCCTG
CCGGCGAGGACCGAGTGCATGGGATTCTTCGTCGACGGGATACAGGGAGG
CTGGTGTCGCGCTGAGGCTGATGCTGTCGAACGGTTTCCTGGAGAGCATC
GAGAGGGCGGACGAGATGGACATCGAGGCGGGCATCTTCGAGGAGGGCCT
TGGCCTGCCGGCGAGGACCGAGTGCATGGGATTCTTCGTCGACGGGATAC
AG