mRNA_E-siliculosus-1a_F_contig1072.516.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1072.516.1 vs. uniprot
Match: D8LEG9_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LEG9_ECTSI) HSP 1 Score: 3784 bits (9812), Expect = 0.000e+0 Identity = 2439/2877 (84.78%), Postives = 2475/2877 (86.03%), Query Frame = 1
Query: 1522 MAVEKTLDGVAGGTVSALALIDRFAGTLYRHSRRVKDMEDQVWTMRNRCARLARLARGDTADGGSPSGAAAALAVASGAERSGAPGRPRSEERREEDESWVAAGVQEAAAAMEAGRRRALEQEVESLKNEVLAERRRADAAQLEARDERRLRSLAAPAXXXXXXXXXS-QDYTINCAYKGDEAALRRKLELAAGEIEALRTHTRDLRSQVQSGWWSWRPSSSETGAFNDGCEPLSGGGGGGVEDEELGFLDGLVSSGACPAAEAALREIDATGGXXXXXXXXNDSNISIEVDRLTSLLSEKDAQIGVLTSTVEALQTSPAFAPXXXXXXXXXXXXGGVAAAPGVNVDGAAVGASSPRLRTDQETARTPTSRGSLKLSSFWAADVSGCGVDSGGEGVGVLNHVGAQGLARRCVALTVRLTSALAREGRAERRAERLAAEAGRRDRKIRAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALRDAELGADDACQRLASSRAECHALVVELRENRQQHREEVLRLSEAHDAKIKEYGDRLSLNGASLPQPPLGGHGTRGRRRGATATVATSVASSPVAAAIAELAAQWRAFASNGTGDDCENDGNNKXXXXXXXXXXXXXDVTGLSGXXXXXXXXXXXXXXXXX--SKGTVISERQLTATATFLQETAVRLDTECSRAVRRARALEWELAGARRGQLDATTALEEAREEVCRLSARAAVAEASVXXXXXXXXXXXXXPAGKPSYAGHLAESSXXXXXXXXXXXXX---IRFGGDDAGEEASTGTGRWSYYTVAAVSLLEKRFAAAVEDLVAAGAARAAAVAGEAXXNARXDXXXXXXRESLARADLLAADLERHKVSATMEQDGAAAAEWRREIRAELGRWWKDDLLALHSGVVLDWGSAGAADAAXXXXXXXXXXXXXXXXXXXXXXX----FTSGSRYSTNPDAEGGHATASVERIEHGVSGEEAMAQALIAGREEQARLEDRLQLSERRVGKLRGETLRLRATLERWHAEFVAPALQEAQKCRRRLPKPGDAGSAAWEAPQRGPTAAATVAVVDGKSVLERKLLEATAGLLGVREEATGLXXXXXXXXXLVARLREDENDARETAGRRVEAAREASRRRADGDLKDAAERLEEERERFKAQLGAAHAEILRLGAEAAESERRRNLDRERRNRQASAARLSSTIEHCGVGDNGPSGEGSITVDDSGVGRRTAGVGGGGGV-ILEERTGVPTGGRKRPAEGTGRAGGGAGGEEIEREQALRREVEGEREALRRMCNGLAVDLKGAVEARSEATDEREALVQEAARAKAEAKLAGLARENLEAALKELGRLLEFARETAGATRDAPVGQGDDEGRPLHATGLYGWDRSKVEAQRFARVMVAAKVAEADLLRRLQGAASAEAELRHLIRRRDIRIEELKRDLAAYDRLGRSMSGGSGSGGNRHHYQRL-SLRESGSTSSPGNVSGAXXXXXXXADTAARGSQAKAVVRERAAKEVALTAALKHLELELAEASARGEVGDAVTRAAERFALRLFPEAESSGGGGRGAWSSKGYCTACGVTPERARRPVANLADSGRGALFLVPSADVERKAALAASSAALDAAAEAQPEIPAAAAGNSSASANNDAGAVEVSPARSAARTTSADTPTRTAGEGERRNRVSSPPTAAVLGLSSGVQSLEANLARLEAIVAGNGPAGVAESTDGTPDGLGWIRSGSAHRGTVVEAAWAEAVRGLRAQVLDLGHRAEVTEELLEEERAAKGNLDEEVLRLRTELLRQQRSYWQATAKFKESRYERALHEDNEQEGNEEDEPVPLGVAAAAGSHETAVSSGARGTPAHEDEEGTDATGARAQXXXXXXXXXXXXXXXRSSLAEAEERLRDRARELRQVRRLHAREAKEVAAELARVVEAHRARVAILEEKLRRTTRKIKAMARPKPKTAAKRGRESVSGGGGDAGGYRCAFSSGTPLSTDELLNLLAAADEEVFEARFRTQRLEFELRTRTAEVDALLREDGGDIAANPVPTERVGIEGDGDGQSTGKATGLASVACAARLAAAEAEVATLTEEGLAARELAVGAQRESAALKLAAHRRTADRADESRSREKELRRQVSAYRREAERLRSTATAASALAPTAGKNGGPRKXXXXXXXXXXXXXXXXXXXXXXAAALKLRTQQLGVIREESERRGRTIVALRAAKAALGEDLRRLRQEAAGQEEKLARAFRDAGVKGNTVKALREKVTALEAEIVALKSARTNTNATTSGGRVLSAEARGGSLPATDAVTADSPGDAVGAALQPSVPLCDVQTATVRDLRAERDRLRASMRGWHGSLSKKTAEIDAQVAELQRLEAEAGTLRAAVARKDDAYRATKKQASFRLREEYEQFKDSSHRWRADAEAKWRGLRRASEAAVRRAKDSEKSGDAAELELAALKSAFRSFLKTLWDDLRSRPPLAPPAAGAADACPAAPDVVGGHAGRAGIDSSAKASAGQHGSGSGSAPGDGGSAKGAKSWTRKGGDAAAAPTSTGLLPINAAERHKQGDAGQEMFAGLAKATAAMAAAGERGGVEVSPIGRGGRKGGEGAGGSPFGELTEAEVSDIMQALSLSDDQGGXXXXXXXXXXXXXXXXXXXXXXNVPVAXXXXTRTGXXXXXXXXXXXXXX-QEIVDGRVERPTETAPPRPQRDGELEKRGFPDGSGEVGNEKEPNAEHNSTDFEGTTAFADRVESALGGSNTSADLAQVLRSLRASGLSKTVADIAVDDEAIFRSTSLVVPQEPTTLSRSWSQPTSHPAAAAGHPLAPGGRDPDDTVERLSSSRDGTTPALGGPVLLGDRWGGTGRTLSPLEEETSAGSLAETAAFGGLVGDNSEPLLVGDLASPS 10113
MAVEKTLDGVAGGTVSALALIDRFAGTLYR SRRVKDMEDQVWTMRNRCARLARLARGDTADGGSPSGAAAA AV SGA RSG PGR RSEERREEDE WVAAGVQEAAAAMEAGRRR LEQEVESL+NEVLAERRRADAAQLEARDERRLRSLAAPA S Q YTINCA KGDEAALRRKLELAAGEIEALRTHTRDLRSQVQSGWWSWRPSSSE GA NDG EP SGG G V+ EELG LDGLVSSGAC AAEAALREIDATG XXXXXXXX SN+SIEVDRLTSLLSEKDAQIGVLTSTVEALQTSPAFAP GGVAA PGVNVDGAAVGASSPRLRTD+ETARTPTSRGSLKLSSFWAADVSGCGVD GGEGVGVLNHVGAQGLARRCV+L VRLTSALAREGRAERRAERLAAEAGRRDRKIR XXXXXXXXXXXXXXXXXXX ALRDAELGADDACQRLASSRAECHAL VELRENRQQHREEVLRLSEAHDA+IKE DRLSL+GASLPQPPL GHGTRGRRRGATATVA SVASSPVAAAIAELAA WRAF SNG GDD ENDGNN XXXXXXXXXXXXX XXXXXXXXXXXXXXXXX SKGTV+SERQLTATATFLQETAVRLDTECSRAVRRARALEWELAGARRGQLDATTALEEAREEVCRLSARAAVAEASVXXXXXXXXXXXXX KPSYA LAES XXXXXXXXXXXXX IRFGG DAGEEAST TGRWSYYTVAAVSLLEKRFAAAVEDLVAAGAARAAAVAGE XX X XXXXXX E LARADLLAADLERHKVSATMEQDGAAAAEWRREIRAELGRWWKDDLLALH GVVLDWGSAGAADAA XXXXXX FTSGSRYS NPD EG HATAS+ERIEHGVSGEEAMAQALIAGREEQA LEDRLQLSERRVGKLRGETLRLRATLERWH EFVAPALQEAQKCRR LP PGDA AA APQRG TAAATVAVVDGKSVLERKLLEATAGLLGVREEAT L LVARLREDENDARETAGRRVE+AREASRRRADGDLKDAAERLEEERERFKAQLGAAHAEILRLGAEAAESERRRNLD+ERRNRQASAARLSST EH GVGDNGPSGEGSITVDD GVGRRTA ILEERTGVPTGGRKRPAEGTGR AGGEEIERE ALRREVEGEREALRRMCNGLAVDLKGAVEARSEA DEREALVQEAARAKAEAKLAGLARENLE ALKELGRLLEFARETAGATRDAPVG +DE RPLHA GL GWDRSKVEAQRFARVMVAAKVA+ADLLRRLQGAASAEAELRHLIRRRDIRIEELK DLAA DRLGRS SGGS SLRESGSTSSPGNVSGA DT+ RGSQAKAV ER AKEVALTAALKHLELELAEASARGEVGDAVTRAAERFALRLFPEAESSGGGGRGAWSSKGYCTACG+TPERARRPV NL DSGRGALFLVPSAD+ERKAALAASSAALDAAAEAQPE PAA DAGAVE SPARSAARTT GERRNRVSSP TAA LGLSSGVQSLEANLARLEA+VAGNGPAGVAESTDG PDGLGWIRSGSA+ GTVVEAAWAEAVRGLRAQVLDLGHRAEVTEELLEEERAAKGNLDEEVLRLRTELLRQQRS+WQATAK KE RYERALHEDNEQEGNEED XXXXXXXXXXXXXXX ERLR RARELR+VRRLHAR AAELARVVEAHRARVAILEEKLRRTTRKIKAMARPKPKTAAKRGRESVSGGGGDAGGY+CAFSS PLSTDELLNLLAAADEEVFEAR RTQRLEFELRT+TAE DALLREDGG IAANPVPTERVG+EGDGDGQSTG+ATGLASVACAARLAAAEAEVATL EEGLAAREL VGAQRESAALKLAAHR+TADRADESRSREKELRRQVSAY+REAERLRSTATA+SALAPTAGK GGPR XXXXXXXXXXXXXXX AAALKLRTQQLGVIREESERRGRTIVALRAAKAALGEDLRRLRQEAAGQEEKLARAFRDAGVKGNTVKALREKVTALEAEIVALKSARTN N TT GGRVLSAEARGGSLP TDAVTADSPG+AVGAALQPSVPLCDVQTATVRDLRAERDRLRASMRGWHGSLSKKTAEIDAQVAELQRLEAEAGTLRAAVARKDDAYRATKKQ +REEYEQFKDSSHRWR DAEAKWRGLRRASEAAVRRAKDSEKSGDAAELELAALKSAFRSFLKTLWDDLRSRPPLAPPAAGAADACPAAPDVVGG AGR GIDSS KASAGQHGSG GSA GDG S KGAKSWTRK GDAAA ++HKQGDAGQE+FAGLAKATAA+ GSPFGELTEAEVSDIMQALSLSDDQGG XXXXXXXXXXXXXXXXX NVPVA TR G XXXXXX QEI DGRVERPTETAPPRP RDGELEKRGFPDGSG+VGNEKEP EH ST+FEGTTAFADRVESALGGSNTSADLA+VLRSLRASGLSKTVADIAVDDE IFRSTSL VPQEPTTLSRSWSQPTSHPAAAAGHPLAPGGR PDDTVERLSSSRDGT PALGGPVLLGDRWGGTGR LSPLEEETSAGSLAETA FGGLVGDNSEPLLVGDLASPS
Sbjct: 1 MAVEKTLDGVAGGTVSALALIDRFAGTLYRQSRRVKDMEDQVWTMRNRCARLARLARGDTADGGSPSGAAAAPAVVSGAGRSGTPGRLRSEERREEDECWVAAGVQEAAAAMEAGRRRDLEQEVESLRNEVLAERRRADAAQLEARDERRLRSLAAPAGGGDGSSNSSIQGYTINCATKGDEAALRRKLELAAGEIEALRTHTRDLRSQVQSGWWSWRPSSSEAGADNDGSEPSSGGRGR-VKGEELGLLDGLVSSGACAAAEAALREIDATGXXXXXXXXX--SNVSIEVDRLTSLLSEKDAQIGVLTSTVEALQTSPAFAPPPLPPSPRK---GGVAA-PGVNVDGAAVGASSPRLRTDRETARTPTSRGSLKLSSFWAADVSGCGVDDGGEGVGVLNHVGAQGLARRCVSLAVRLTSALAREGRAERRAERLAAEAGRRDRKIRXXXXXXXXXXXXXXXXXXXXXKTAAALGSLRAESAARLREAGEEASQLRRALRDAELGADDACQRLASSRAECHALAVELRENRQQHREEVLRLSEAHDARIKECADRLSLDGASLPQPPLCGHGTRGRRRGATATVAASVASSPVAAAIAELAAHWRAFVSNGMGDDYENDGNNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSKGTVLSERQLTATATFLQETAVRLDTECSRAVRRARALEWELAGARRGQLDATTALEEAREEVCRLSARAAVAEASVXXXXXXXXXXXXXXXXKPSYADQLAESXXXXXXXXXXXXXXXXXIRFGGGDAGEEASTRTGRWSYYTVAAVSLLEKRFAAAVEDLVAAGAARAAAVAGEXXXXXXXXXXXXXXXEPLARADLLAADLERHKVSATMEQDGAAAAEWRREIRAELGRWWKDDLLALHGGVVLDWGSAGAADAAAVALTRKNKKMPADGIGXXXXXXXXXXFTSGSRYSANPDVEGRHATASIERIEHGVSGEEAMAQALIAGREEQAHLEDRLQLSERRVGKLRGETLRLRATLERWHTEFVAPALQEAQKCRRSLPPPGDARGAALAAPQRGSTAAATVAVVDGKSVLERKLLEATAGLLGVREEATDLRREVASLRALVARLREDENDARETAGRRVESAREASRRRADGDLKDAAERLEEERERFKAQLGAAHAEILRLGAEAAESERRRNLDKERRNRQASAARLSSTGEHGGVGDNGPSGEGSITVDDGGVGRRTAXXXXXXXXXILEERTGVPTGGRKRPAEGTGRXXXXAGGEEIEREWALRREVEGEREALRRMCNGLAVDLKGAVEARSEAKDEREALVQEAARAKAEAKLAGLARENLEVALKELGRLLEFARETAGATRDAPVGLRNDEDRPLHAAGLSGWDRSKVEAQRFARVMVAAKVAQADLLRRLQGAASAEAELRHLIRRRDIRIEELKHDLAASDRLGRSTSGGSXXXXXXXXXXXXXSLRESGSTSSPGNVSGAAAAAVAAGDTSTRGSQAKAVASERVAKEVALTAALKHLELELAEASARGEVGDAVTRAAERFALRLFPEAESSGGGGRGAWSSKGYCTACGLTPERARRPVVNLTDSGRGALFLVPSADIERKAALAASSAALDAAAEAQPETPAAXXXXXXXXXXXDAGAVETSPARSAARTTXXXXXXXXXXXGERRNRVSSPSTAAALGLSSGVQSLEANLARLEAVVAGNGPAGVAESTDGAPDGLGWIRSGSAYGGTVVEAAWAEAVRGLRAQVLDLGHRAEVTEELLEEERAAKGNLDEEVLRLRTELLRQQRSHWQATAKLKE-RYERALHEDNEQEGNEEDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXERLRVRARELREVRRLHARXXXXXAAELARVVEAHRARVAILEEKLRRTTRKIKAMARPKPKTAAKRGRESVSGGGGDAGGYQCAFSSSVPLSTDELLNLLAAADEEVFEARSRTQRLEFELRTKTAEADALLREDGGVIAANPVPTERVGVEGDGDGQSTGEATGLASVACAARLAAAEAEVATLREEGLAARELVVGAQRESAALKLAAHRKTADRADESRSREKELRRQVSAYKREAERLRSTATASSALAPTAGKKGGPRXXXXXXXXXXXXXXXXDAE----AAALKLRTQQLGVIREESERRGRTIVALRAAKAALGEDLRRLRQEAAGQEEKLARAFRDAGVKGNTVKALREKVTALEAEIVALKSARTNANTTTLGGRVLSAEARGGSLPDTDAVTADSPGEAVGAALQPSVPLCDVQTATVRDLRAERDRLRASMRGWHGSLSKKTAEIDAQVAELQRLEAEAGTLRAAVARKDDAYRATKKQL-LSVREEYEQFKDSSHRWREDAEAKWRGLRRASEAAVRRAKDSEKSGDAAELELAALKSAFRSFLKTLWDDLRSRPPLAPPAAGAADACPAAPDVVGGLAGRTGIDSSTKASAGQHGSGGGSASGDGRSGKGAKSWTRKEGDAAA-------------QKHKQGDAGQELFAGLAKATAAIXXXXXXXXXXXXXXXXXXXX--XXXEGSPFGELTEAEVSDIMQALSLSDDQGGSRXXXXXXXXXXXXXXXXXLYLNVPVAATEPTRMGTALLTSQQXXXXXXXQEIADGRVERPTETAPPRPLRDGELEKRGFPDGSGQVGNEKEPYTEHKSTEFEGTTAFADRVESALGGSNTSADLAEVLRSLRASGLSKTVADIAVDDEGIFRSTSLAVPQEPTTLSRSWSQPTSHPAAAAGHPLAPGGRCPDDTVERLSSSRDGTAPALGGPVLLGDRWGGTGRKLSPLEEETSAGSLAETATFGGLVGDNSEPLLVGDLASPS 2849
BLAST of mRNA_E-siliculosus-1a_F_contig1072.516.1 vs. uniprot
Match: D8LEH0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEH0_ECTSI) HSP 1 Score: 530 bits (1364), Expect = 3.550e-165 Identity = 406/447 (90.83%), Postives = 409/447 (91.50%), Query Frame = 1
Query: 1 MEGRAAATPLGLVDSGSGNAQRLLKKENARLQVIRLRSATAPDNASRTTFTQGEEGRLDAVHPGSRDGRGSASTHPPPLHSEYDACADDEERRGVMGAPRKGPAPEGVATGDLRSEVARLETVALSRKDDALERATAEHREREARLGDRVRALERLQETARRTVLDREERLRNAEAAVAEASVTAXXXXXXXXXMPPSSPPVNAEQGVTGFEAAPTGVPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-GGKEARRLHRLLEEQGLEVVALRQRVLKAEIVARTRDSGRRDEERWAKEEGKERGGLKGVGVEGSSTKTQKLVESADLAEMEGRVADLHARGDTREALMVAREAVSALKLALIRTEGEVELHAQLLSVCLFNTPHRLYPADARSST 1338
MEGRAAA PLGLVDSGSGN QRLLKKENARLQVIRLRSATAPDNASRTTFT+GEEGR DAVHPGSR GRGS ST P LHSEY ACA+DEERRGV GAPRKGPAPE VATGDL SEVARLETVALSRKDDALERATAEHREREARLGDRVRALERLQETARRTVLDREERLR AEAAVAEA VTAXXXXXXXX P SSPPVNAEQGVTGFEAAP GVPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX GGKEARRLHRLLEEQGLEVVALRQRVLKAEIVARTRDSGR DEERWAKEE KERGGLKGVGVEGSSTKTQKLVESA LAEMEGRVADLHARGDTREALMVARE VSALKLALIRTEGEVELHAQLLS L R+ AR T
Sbjct: 1 MEGRAAAAPLGLVDSGSGNVQRLLKKENARLQVIRLRSATAPDNASRTTFTEGEEGRRDAVHPGSRGGRGSVSTQSPSLHSEYGACANDEERRGVKGAPRKGPAPEAVATGDLHSEVARLETVALSRKDDALERATAEHREREARLGDRVRALERLQETARRTVLDREERLRKAEAAVAEAPVTAXXXXXXXXTSP-SSPPVNAEQGVTGFEAAPAGVPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDGAGGKEARRLHRLLEEQGLEVVALRQRVLKAEIVARTRDSGRHDEERWAKEEAKERGGLKGVGVEGSSTKTQKLVESAVLAEMEGRVADLHARGDTREALMVARETVSALKLALIRTEGEVELHAQLLSAVLAEMEGRVADLHARGDT 446 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1072.516.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90) Total hits: 2
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig1072.516.1 >prot_E-siliculosus-1a_F_contig1072.516.1 ID=prot_E-siliculosus-1a_F_contig1072.516.1|Name=mRNA_E-siliculosus-1a_F_contig1072.516.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=3372bp MEGRAAATPLGLVDSGSGNAQRLLKKENARLQVIRLRSATAPDNASRTTFback to top mRNA from alignment at E-siliculosus-1a_F_contig1072:16046..32612- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_F_contig1072.516.1 ID=mRNA_E-siliculosus-1a_F_contig1072.516.1|Name=mRNA_E-siliculosus-1a_F_contig1072.516.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=16567bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1072:16046..32612- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig1072:16046..32612- >mRNA_E-siliculosus-1a_F_contig1072.516.1 ID=mRNA_E-siliculosus-1a_F_contig1072.516.1|Name=mRNA_E-siliculosus-1a_F_contig1072.516.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=20232bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1072:16046..32612- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top |