Homology
BLAST of mRNA_E-siliculosus-1a_M_contig98.17685.1 vs. uniprot
Match:
D7FZP1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZP1_ECTSI)
HSP 1 Score: 60.5 bits (145), Expect = 2.590e-8
Identity = 28/33 (84.85%), Postives = 29/33 (87.88%), Query Frame = 0
Query: 1 LWDVGNDTLRNEDVSGLWKLTVLTSLVGWSPWV 33
LWDVGNDTLRNEDVSGLWKLTVLTSL+ P V
Sbjct: 468 LWDVGNDTLRNEDVSGLWKLTVLTSLISPVPLV 500
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig98.17685.1 vs. uniprot
Analysis Date: 2022-09-16 (
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90 )
Total hits: 1
L W D V G N D T L R N E D V S G L W K L T V L T S L V G W S P W V G I A D G G L V F V F V L A S S F F S E C T E N R F G V C V V S L P P S L V V G C N G S N F G V F E V A R L S P T P E N Q H Q D L G V L H L P R D T P L N R T M * 10 20 30 40 50 60 70 80 90 100 110 Expect = 2.59e-8 / Id = 84.85 Sequence D7FZP1_ECTSI
Match Name E-value Identity Description
D7FZP1_ECTSI 2.590e-8 84.85 Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male
Date Performed: 2022-09-29
L W D V G N D T L R N E D V S G L W K L T V L T S L V G W S P W V G I A D G G L V F V F V L A S S F F S E C T E N R F G V C V V S L P P S L V V G C N G S N F G V F E V A R L S P T P E N Q H Q D L G V L H L P R D T P L N R T M * 10 20 30 40 50 60 70 80 90 100 110 Score = Score = Score = Score = Sequence TRANSMEMBRANE CYTOPLASMIC_DOMAIN NON_CYTOPLASMIC_DOMAIN TMhelix
IPR Term IPR Description Source Source Term Source Description Alignment
None No IPR available PHOBIUS TRANSMEMBRANE Transmembrane region coord: 29..51 None No IPR available PHOBIUS CYTOPLASMIC_DOMAIN Cytoplasmic domain coord: 52..113 None No IPR available PHOBIUS NON_CYTOPLASMIC_DOMAIN Non cytoplasmic domain coord: 1..28 None No IPR available TMHMM TMhelix coord: 29..51
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence
>prot_E-siliculosus-1a_M_contig98.17685.1 ID=prot_E-siliculosus-1a_M_contig98.17685.1|Name=mRNA_E-siliculosus-1a_M_contig98.17685.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=114bp back to top