Homology
BLAST of mRNA_E-siliculosus-1a_M_contig93.17324.1 vs. uniprot
Match:
D7G907_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G907_ECTSI)
HSP 1 Score: 283 bits (723), Expect = 6.850e-95
Identity = 187/191 (97.91%), Postives = 188/191 (98.43%), Query Frame = 0
Query: 1 MRISLLQLCLGFLAVCLVLGEQVEEAPSSNLFKKFFTKTKNGLGKVRKSLAVKKDKAVDEEDPLGEGVEAVLDAIDEFVAEGEKNTGKAAEDVKKVVDETKESVKSAISASKDKLNEAGADIKSTVDAAVEGAAADMEAVRGSLQDGIKNVGDQVTEAARXXXXXXXXXXXXXXXXXXXXXXXASTAAGEL 191
MRISLLQLC GFLAVCLVLGEQVEEAPSSNLFKKFFTKTKNGLGKVRKSLAVKKDKAVDEEDPLGEGVEAVLDAIDEFVAEGEKNTGKAAEDVKKVVDETKESVKSAISASKDKLNEAGADIKSTVDAAVEGAAADM+AVRGSLQDGIKNVGDQV EAA XXXXXXXXXXXXXXXXXXXXXXXASTAAGEL
Sbjct: 1 MRISLLQLCFGFLAVCLVLGEQVEEAPSSNLFKKFFTKTKNGLGKVRKSLAVKKDKAVDEEDPLGEGVEAVLDAIDEFVAEGEKNTGKAAEDVKKVVDETKESVKSAISASKDKLNEAGADIKSTVDAAVEGAAADMDAVRGSLQDGIKNVGDQVAEAAXXXXXXXXXXXXXXXXXXXXXXXXASTAAGEL 191
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig93.17324.1 vs. uniprot
Analysis Date: 2022-09-16 (
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90 )
Total hits: 1
M R I S L L Q L C L G F L A V C L V L G E Q V E E A P S S N L F K K F F T K T K N G L G K V R K S L A V K K D K A V D E E D P L G E G V E A V L D A I D E F V A E G E K N T G K A A E D V K K V V D E T K E S V K S A I S A S K D K L N E A G A D I K S T V D A A V E G A A A D M E A V R G S L Q D G I K N V G D Q V T E A A R E A A E S A A A A S K Q A Q E D A E E T A E K A S T A A G E L * 20 40 60 80 100 120 140 160 180 Expect = 6.85e-95 / Id = 97.91 Sequence D7G907_ECTSI
Match Name E-value Identity Description
D7G907_ECTSI 6.850e-95 97.91 Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male
Date Performed: 2022-09-29
M R I S L L Q L C L G F L A V C L V L G E Q V E E A P S S N L F K K F F T K T K N G L G K V R K S L A V K K D K A V D E E D P L G E G V E A V L D A I D E F V A E G E K N T G K A A E D V K K V V D E T K E S V K S A I S A S K D K L N E A G A D I K S T V D A A V E G A A A D M E A V R G S L Q D G I K N V G D Q V T E A A R E A A E S A A A A S K Q A Q E D A E E T A E K A S T A A G E L * 20 40 60 80 100 120 140 160 180 Score = Expect = 1.2E-6 / Score = 30.3 Score = Score = Score = Score = Score = Score = 0.904 Score = Sequence Coil G3DSA:1.20.120.20 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_C_REGION NON_CYTOPLASMIC_DOMAIN SIGNAL_PEPTIDE_N_REGION SignalP-noTM SSF58113
IPR Term IPR Description Source Source Term Source Description Alignment
None No IPR available COILS Coil Coil coord: 160..183 None No IPR available GENE3D 1.20.120.20 coord: 37..191 None No IPR available PHOBIUS SIGNAL_PEPTIDE Signal Peptide coord: 1..20 None No IPR available PHOBIUS SIGNAL_PEPTIDE_H_REGION Signal peptide H-region coord: 5..16 None No IPR available PHOBIUS SIGNAL_PEPTIDE_C_REGION Signal peptide C-region coord: 17..20 None No IPR available PHOBIUS NON_CYTOPLASMIC_DOMAIN Non cytoplasmic domain coord: 21..191 None No IPR available PHOBIUS SIGNAL_PEPTIDE_N_REGION Signal peptide N-region coord: 1..4 None No IPR available SIGNALP_EUK SignalP-noTM SignalP-noTM coord: 1..20 None No IPR available SUPERFAMILY 58113 Apolipoprotein A-I coord: 72..183
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence
>prot_E-siliculosus-1a_M_contig93.17324.1 ID=prot_E-siliculosus-1a_M_contig93.17324.1|Name=mRNA_E-siliculosus-1a_M_contig93.17324.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=192bp back to top