Homology
BLAST of mRNA_E-siliculosus-1a_M_contig92.17259.1 vs. uniprot
Match:
D7FRA2_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FRA2_ECTSI)
HSP 1 Score: 250 bits (639), Expect = 9.450e-83
Identity = 124/127 (97.64%), Postives = 126/127 (99.21%), Query Frame = 0
Query: 29 QGLWCFRTFGRWQVFGLAVTSTVYYVCYHGMLEAAKSGVGGGAYFDVFAVCVAGQLVSAFSAYGTYIYMLVPGYYACLAGYWVFRKLGGWVRSQQELNASEEPSAADLKREAKKERKAARAPRVRMR 155
+GLWCFRTFGRWQVFGLAVTSTVYYVCYHGMLEAAKSGVGGGAYFDVFAVCVAGQLVS FSAYGTYIYMLVPGYYACLAGYWVFRKLGGWVRSQQELNASEEPSAADLKR+AKKERKAARAPRVRMR
Sbjct: 63 RGLWCFRTFGRWQVFGLAVTSTVYYVCYHGMLEAAKSGVGGGAYFDVFAVCVAGQLVSTFSAYGTYIYMLVPGYYACLAGYWVFRKLGGWVRSQQELNASEEPSAADLKRQAKKERKAARAPRVRMR 189
BLAST of mRNA_E-siliculosus-1a_M_contig92.17259.1 vs. uniprot
Match:
B6AJ88_CRYMR (Uncharacterized protein n=2 Tax=Cryptosporidium TaxID=5806 RepID=B6AJ88_CRYMR)
HSP 1 Score: 53.5 bits (127), Expect = 4.430e-6
Identity = 29/81 (35.80%), Postives = 43/81 (53.09%), Query Frame = 0
Query: 22 HFSISRSQGLWCFRTFGRWQVFGLAVTSTVYYVCYHGMLEAAKSGVGGGAYFDVFAVCVAGQLVSAFSAYGTYIYMLVPGY 102
HF R L +++ W G++V + +Y V Y G++ K G G Y D+F V L+S FS Y YIY+++PGY
Sbjct: 31 HFLFKRLYSLSYYKS---WDFIGISVIAIIYIVTYSGIVSRLKVGAGYSIYQDIFIVNTIVALLSIFSKYAWYIYLVIPGY 108
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig92.17259.1 vs. uniprot
Analysis Date: 2022-09-16 (
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90 )
Total hits: 2
M A D C I N T P M A S C A S Y V F L P Y A H F S I S R S Q G L W C F R T F G R W Q V F G L A V T S T V Y Y V C Y H G M L E A A K S G V G G G A Y F D V F A V C V A G Q L V S A F S A Y G T Y I Y M L V P G Y Y A C L A G Y W V F R K L G G W V R S Q Q E L N A S E E P S A A D L K R E A K K E R K A A R A P R V R M R * 20 40 60 80 100 120 140 Expect = 9.45e-83 / Id = 97.64 Expect = 4.43e-6 / Id = 35.80 Sequence D7FRA2_ECTSI B6AJ88_CRYMR
Match Name E-value Identity Description
D7FRA2_ECTSI 9.450e-83 97.64 Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more] B6AJ88_CRYMR 4.430e-6 35.80 Uncharacterized protein n=2 Tax=Cryptosporidium Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male
Date Performed: 2022-09-29
M A D C I N T P M A S C A S Y V F L P Y A H F S I S R S Q G L W C F R T F G R W Q V F G L A V T S T V Y Y V C Y H G M L E A A K S G V G G G A Y F D V F A V C V A G Q L V S A F S A Y G T Y I Y M L V P G Y Y A C L A G Y W V F R K L G G W V R S Q Q E L N A S E E P S A A D L K R E A K K E R K A A R A P R V R M R * 20 40 60 80 100 120 140 Expect = 5.8E-7 / Score = 29.4 Score = Score = Score = Score = Score = Score = Score = Score = Score = Score = Sequence PF05620 PTHR13505 TRANSMEMBRANE CYTOPLASMIC_DOMAIN NON_CYTOPLASMIC_DOMAIN TRANSMEMBRANE CYTOPLASMIC_DOMAIN TRANSMEMBRANE NON_CYTOPLASMIC_DOMAIN TMhelix TMhelix
IPR Term IPR Description Source Source Term Source Description Alignment
IPR008506 SRP-independent targeting protein 2/TMEM208 PFAM PF05620 TMEM208_SND2 coord: 72..146 IPR008506 SRP-independent targeting protein 2/TMEM208 PANTHER PTHR13505 FAMILY NOT NAMED coord: 35..151 None No IPR available PHOBIUS TRANSMEMBRANE Transmembrane region coord: 40..59 None No IPR available PHOBIUS CYTOPLASMIC_DOMAIN Cytoplasmic domain coord: 60..70 None No IPR available PHOBIUS NON_CYTOPLASMIC_DOMAIN Non cytoplasmic domain coord: 1..39 None No IPR available PHOBIUS TRANSMEMBRANE Transmembrane region coord: 94..112 None No IPR available PHOBIUS CYTOPLASMIC_DOMAIN Cytoplasmic domain coord: 113..155 None No IPR available PHOBIUS TRANSMEMBRANE Transmembrane region coord: 71..88 None No IPR available PHOBIUS NON_CYTOPLASMIC_DOMAIN Non cytoplasmic domain coord: 89..93 None No IPR available TMHMM TMhelix coord: 42..60 None No IPR available TMHMM TMhelix coord: 90..112
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence
>prot_E-siliculosus-1a_M_contig92.17259.1 ID=prot_E-siliculosus-1a_M_contig92.17259.1|Name=mRNA_E-siliculosus-1a_M_contig92.17259.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=156bp back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
Term Definition
IPR008506 SND2/TMEM208