prot_E-siliculosus-1a_M_contig91.17216.1 (polypeptide) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_E-siliculosus-1a_M_contig91.17216.1
Unique Name	prot_E-siliculosus-1a_M_contig91.17216.1
Type	polypeptide
Organism	Ectocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Sequence length	636

Homology

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BLAST of mRNA_E-siliculosus-1a_M_contig91.17216.1 vs. uniprot
Match: D7FTW6_ECTSI (HTH La-type RNA-binding domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTW6_ECTSI)

HSP 1 Score: 762 bits (1967), Expect = 1.670e-271
Identity = 459/505 (90.89%), Postives = 465/505 (92.08%), Query Frame = 0

Query:   47 SFRRPLDTETAVAAPASEEASSSVVVEDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPPVEELPKDTKAALVKQVEFYFSDENLPTDAFMKKKVKAGGAQGWVPLKVICSFPKVKKLSKDIRAIALALEDSQALVVAKATRVRRKTPFKFPDKDGMADVTSRTVVAVNIPADSTVESLTPFFSSCGVAELIRVIHKSKSAGTTKTDNRSSEIQAPVGPNRDLYATCQFSTLEEAIRAVNELTDRKSWRGGLRVSLANGVTVEKALAKLKAASNKKAKQEQKQRVNSRSPVDRGQRNVRDGQMRSRSLTELELERTAGANGGASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPTTRKPRSVSNVDALFSSSTGGSGGGIENGSPPRHTMGSAGDGLPRKGVVQTLSSEGWSWIKKDGQGSRKSGNRIPFVMGDVVMKDGEQRQPLQKGDHVEYRVWKDTEGRSMAVRVERAKERPXXXXXXXXXXSRSTQAHFR 551
            S + PLDTET VAAPASEEAS  VVVEDG      XXXXXXXXXXXXXXX           PPVEELP+DTKAALVKQVEFYFSDENLPTDAFMKKKVKAGGAQGWVPLKVICSFPKVKK+SKDIRAIALALEDSQALVVAKATRVRRKTPFKFPDKDG ADVTSRTVVAVNIPA+STVESLTPFFSSCGVAELIRVIHKSK+AGTTKTDNRSS IQAP GPNRDLYATCQFSTLEEAIRAVNELTDRKSWRGGLRVSLANGVTVEKALAKLKAASNKKAKQEQKQRVNSRSPVDRGQRNVRDGQMRSRSLTELELERTAGA+GGAS  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   APTTRKPRSVSNVDALFSSSTGGSGGGIENGSPPRHTMGSAGDGLPRKGVVQTLSSEGWSWIKKDGQGSRKSGNRIPFVMGDVVMKDGEQRQPLQKGDHVEYRVWKDTEGRSMAVRVERAKERP          SRSTQAHFR
Sbjct:   22 SAKMPLDTET-VAAPASEEASGPVVVEDGENGLAPXXXXXXXXXXXXXXXTSGKEDTAEVAPPVEELPEDTKAALVKQVEFYFSDENLPTDAFMKKKVKAGGAQGWVPLKVICSFPKVKKMSKDIRAIALALEDSQALVVAKATRVRRKTPFKFPDKDGRADVTSRTVVAVNIPAESTVESLTPFFSSCGVAELIRVIHKSKTAGTTKTDNRSSGIQAPAGPNRDLYATCQFSTLEEAIRAVNELTDRKSWRGGLRVSLANGVTVEKALAKLKAASNKKAKQEQKQRVNSRSPVDRGQRNVRDGQMRSRSLTELELERTAGASGGASSRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGEAAPTTRKPRSVSNVDALFSSSTGGSGGGIENGSPPRHTMGSAGDGLPRKGVVQTLSSEGWSWIKKDGQGSRKSGNRIPFVMGDVVMKDGEQRQPLQKGDHVEYRVWKDTEGRSMAVRVERAKERPRPAGGAVGSGSRSTQAHFR 525

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BLAST of mRNA_E-siliculosus-1a_M_contig91.17216.1 vs. uniprot
Match: A0A6H5JW40_9PHAE (HTH La-type RNA-binding domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JW40_9PHAE)

HSP 1 Score: 185 bits (469), Expect = 1.420e-45
Identity = 107/146 (73.29%), Postives = 109/146 (74.66%), Query Frame = 0

Query:   50 RPLDTETAVAAPASEEASSSVVVEDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPPVEELPKDTKAALVKQVEFYFSDENLPTDAFMKKKVKAGGAQGWVPLKVICSFPKVKKLSKDIRAIALALEDSQALVVAKATRVRRK 195
            RPL+TET VAAPASEE S  VV EDG                                PPVEELP+DTKAALVKQVEFYFSDENLPTDAFMKKKVKAGGAQGWVPLKVICSFPKVKKLSKDIRAIALALEDSQALVVAKATRVRRK
Sbjct: 1107 RPLNTET-VAAPASEEGSGPVVAEDGESGLAPPAAMASSAAVVSSDETNGKEDTSEA-PPVEELPEDTKAALVKQVEFYFSDENLPTDAFMKKKVKAGGAQGWVPLKVICSFPKVKKLSKDIRAIALALEDSQALVVAKATRVRRK 1250

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BLAST of mRNA_E-siliculosus-1a_M_contig91.17216.1 vs. uniprot
Match: A0A2R6XE71_MARPO (Uncharacterized protein n=3 Tax=Marchantia polymorpha TaxID=3197 RepID=A0A2R6XE71_MARPO)

HSP 1 Score: 140 bits (352), Expect = 1.030e-31
Identity = 80/192 (41.67%), Postives = 125/192 (65.10%), Query Frame = 0

Query:  115 KDTKAALVKQVEFYFSDENLPTDAFMKKKVKAGGAQGWVPLKVICSFPKVKKLSKDIRAIALALEDSQALVVAK-ATRVRRKTPFKFPDKDGMADVTSRTVVAVNIPADSTVESLTPFFSSCGVAELIRVIHKSKSAGTTKTDNRSSEIQAPVGPNRDLYATCQFSTLEEAIRAVNELTDRKSWRGGLRVSL 305
            ++ KA +VKQVEFYFSD+NLPTD ++ K VK    +G+VP+ V+ SF K+K L K+   +A AL +S  LVV++   +VRR  P   PD D + +V SRTVVA N+P D ++ES+   F S G  +++R+     + G ++T   +++ ++ +  +  L+A  +F T+E+A +AV+ LTD ++WR GLRV L
Sbjct:  197 EELKAKIVKQVEFYFSDQNLPTDNYLMKFVKKD-PEGFVPIPVVASFRKIKNLVKNHGIVAAALRNSTLLVVSEDGKKVRRAQPL--PDVD-LEEVQSRTVVAENLPEDHSIESVEQLFGSVGNVKMVRICQPEAANGASQT---AAKFKSDMVVSNKLHALIEFETVEQAEKAVSALTDERNWRSGLRVRL 381

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BLAST of mRNA_E-siliculosus-1a_M_contig91.17216.1 vs. uniprot
Match: A0A5J4Y4J7_9CHLO (La-related 7 n=1 Tax=Trebouxia sp. A1-2 TaxID=2608996 RepID=A0A5J4Y4J7_9CHLO)

HSP 1 Score: 135 bits (340), Expect = 2.190e-31
Identity = 78/190 (41.05%), Postives = 113/190 (59.47%), Query Frame = 0

Query:  116 DTKAALVKQVEFYFSDENLPTDAFMKKKVKAGGAQGWVPLKVICSFPKVKKLSKDIRAIALALEDSQALVVAKATRVRRKTPFKFPDKDGMADVTSRTVVAVNIPADSTVESLTPFFSSCGVAELIRVIHKSKSAGTTKTDNRSSEIQAPVGPNRDLYATCQFSTLEEAIRAVNELTDRKSWRGGLRVSL 305
            D  A +VKQV FYFSD NLPTD F+ K+V+    +GWVP+++I SF ++K LSKDI+ IA ALE S  LVV+   RVRRK P    D+    +V  RT +  N+P  +T++SLT  FS+ G  +++R+   +    +       S   A +  +R L+A  +F   E+   AV +LTD  +WR GLR ++
Sbjct:   47 DLVAKIVKQVNFYFSDTNLPTDNFLLKEVRKT-PEGWVPIRLIASFKRMKSLSKDIKVIAAALETSTELVVS-GHRVRRKEPLPQVDE---TEVLYRTAIVDNLPDQATIDSLTGMFSAAGKVKMVRICQPNSGPRSIA----QSIPGADLAVSRQLHALIEFENQEQVAAAVKQLTDSNNWRSGLRAAI 227

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BLAST of mRNA_E-siliculosus-1a_M_contig91.17216.1 vs. uniprot
Match: D8QWC1_SELML (Uncharacterized protein (Fragment) n=2 Tax=Selaginella moellendorffii TaxID=88036 RepID=D8QWC1_SELML)

HSP 1 Score: 132 bits (331), Expect = 6.480e-31
Identity = 77/194 (39.69%), Postives = 119/194 (61.34%), Query Frame = 0

Query:  113 LPKDTKAALVKQVEFYFSDENLPTDAFMKKKVKAGGAQGWVPLKVICSFPKVKKLSKDIRAIALALEDSQALVVAK-ATRVRRKTPFKFPDKDGMADVTSRTVVAVNIPADSTVESLTPFFSSCGVAELIRVIHKSKSAGTTKTDNRSSEIQAPVGPNRDLYATCQFSTLEEAIRAVNELTDRKSWRGGLRVSL 305
            L +DT+  +V+QVEFYFSD NLPTD ++ K +K    +G+VP+ +I SF K+K+L+K+  A+A AL  S  LVV++   +VRR  P    D D   ++  RTVVA N+P D +++SL   F + G  +++RV     SA +  +   +   +     +  L+A  ++ TLE+A +AV ELTD+++WR GL V L
Sbjct:   76 LSEDTRTQVVQQVEFYFSDANLPTDNYLMKFIKKD-PEGFVPIPIIGSFRKIKQLTKNYGALAAALRSSSKLVVSEDGKKVRRAEPLADIDLD---EIQGRTVVAENLPEDHSIQSLEKLFGTIGSVKMVRVCEPG-SANSVNSAALAKHSKTDRVVSNKLHALVEYETLEQAEKAVAELTDQRNWRSGLHVRL 264

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BLAST of mRNA_E-siliculosus-1a_M_contig91.17216.1 vs. uniprot
Match: C1N3J9_MICPC (Predicted protein n=1 Tax=Micromonas pusilla (strain CCMP1545) TaxID=564608 RepID=C1N3J9_MICPC)

HSP 1 Score: 134 bits (338), Expect = 1.760e-30
Identity = 87/206 (42.23%), Postives = 116/206 (56.31%), Query Frame = 0

Query:  108 PPVEELPKDTKAALVKQVEFYFSDENLPTDAFMKKKVKAGGAQGWVPLKVICSFPKVKKLSK----DIRAIALALEDSQALVVAKA-TRVRRKTPFKFPDKDGMADVTSRTVVAVNIPADS-----TVESLTPFFSSCGVAELIRVIHKSKSAGTTKTDNRSSEIQAPVGPNRDLYATCQFSTLEEAIRAVNELTDRKSWRGGLRV 303
            P  + L  + K  +  QVEFYFSD NLPTDAF+ KKV+AGG +GWVPL VICSF ++K+L K     +    LA   S  LV   A T VRR  P   PD D + +V SRTV+A N P  +     T+E++   F+S G   ++RV H   +        +SS +     PN  ++A  +F T EEA+RAV  L + + WR GLRV
Sbjct:   68 PAPKPLTAEQKEKIFAQVEFYFSDANLPTDAFLMKKVRAGGDEGWVPLDVICSFNRMKQLLKKRPHSVVCDVLAELGSALLVSDDAKTAVRRVAPL--PDVD-LEEVQSRTVLAENFPGVNAGEAPTIEAVRELFASAGEVLVVRVRHPGMTQPAGVAAAKSSGLDLIQTPNAHVHALVEFKTAEEALRAVTTLNNDRDWRNGLRV 270

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BLAST of mRNA_E-siliculosus-1a_M_contig91.17216.1 vs. uniprot
Match: A0A7R9TLI1_MICPS (Hypothetical protein (Fragment) n=1 Tax=Micromonas pusilla TaxID=38833 RepID=A0A7R9TLI1_MICPS)

HSP 1 Score: 134 bits (338), Expect = 2.360e-30
Identity = 87/206 (42.23%), Postives = 116/206 (56.31%), Query Frame = 0

Query:  108 PPVEELPKDTKAALVKQVEFYFSDENLPTDAFMKKKVKAGGAQGWVPLKVICSFPKVKKLSK----DIRAIALALEDSQALVVAKA-TRVRRKTPFKFPDKDGMADVTSRTVVAVNIPADS-----TVESLTPFFSSCGVAELIRVIHKSKSAGTTKTDNRSSEIQAPVGPNRDLYATCQFSTLEEAIRAVNELTDRKSWRGGLRV 303
            P  + L  + K  +  QVEFYFSD NLPTDAF+ KKV+AGG +GWVPL VICSF ++K+L K     +    LA   S  LV   A T VRR  P   PD D + +V SRTV+A N P  +     T+E++   F+S G   ++RV H   +        +SS +     PN  ++A  +F T EEA+RAV  L + + WR GLRV
Sbjct:   47 PAPKPLTAEQKEKIFAQVEFYFSDANLPTDAFLMKKVRAGGDEGWVPLDVICSFNRMKQLLKKRPHSVVCDVLAELGSALLVSDDAKTAVRRVAPL--PDVD-LEEVQSRTVLAENFPGVNAGEAPTIEAVRELFASAGEVLVVRVRHPGMTQPAGVAAAKSSGLDLIQTPNAHVHALVEFKTAEEALRAVTTLNNDRDWRNGLRV 249

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BLAST of mRNA_E-siliculosus-1a_M_contig91.17216.1 vs. uniprot
Match: A0A2K1LA96_PHYPA (Uncharacterized protein n=1 Tax=Physcomitrium patens TaxID=3218 RepID=A0A2K1LA96_PHYPA)

HSP 1 Score: 134 bits (337), Expect = 1.520e-29
Identity = 79/194 (40.72%), Postives = 119/194 (61.34%), Query Frame = 0

Query:  113 LPKDTKAALVKQVEFYFSDENLPTDAFMKKKVKAGGAQGWVPLKVICSFPKVKKLSKDIRAIALALEDSQALVVAK-ATRVRRKTPFKFPDKDGMADVTSRTVVAVNIPADSTVESLTPFFSSCGVAELIRVIHKSKSAGTTKTDNRSSEIQAPVGPNRDLYATCQFSTLEEAIRAVNELTDRKSWRGGLRVSL 305
            L ++TKA +VKQVEFYFSD NLPTD ++ K VK   ++G+VP+ V+ SF K+K L K+   +A  L +S  LVV++   +VRR  P   P+ D + ++ +RTVVA N+P D ++ESL   F   G  +++R+     + G   T  +  +    V  +  L+A  ++ T+E A +AV ELTD ++WR GLRV L
Sbjct:  241 LTEETKAKIVKQVEFYFSDTNLPTDNYLMKFVKKD-SEGFVPIPVVASFRKIKNLVKNHGVLAATLRNSTQLVVSEDGKKVRRAHPL--PEVD-LEEIQARTVVAENLPEDHSIESLEQLFGKVGTVKMVRICSPEAANGANATGAKHPKTDMLV--SNKLHALVEYETVELAEKAVAELTDERNWRSGLRVRL 428

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BLAST of mRNA_E-siliculosus-1a_M_contig91.17216.1 vs. uniprot
Match: UPI000D1C965E (la-related protein 6C n=2 Tax=Selaginella moellendorffii TaxID=88036 RepID=UPI000D1C965E)

HSP 1 Score: 133 bits (334), Expect = 1.840e-29
Identity = 78/194 (40.21%), Postives = 119/194 (61.34%), Query Frame = 0

Query:  113 LPKDTKAALVKQVEFYFSDENLPTDAFMKKKVKAGGAQGWVPLKVICSFPKVKKLSKDIRAIALALEDSQALVVAK-ATRVRRKTPFKFPDKDGMADVTSRTVVAVNIPADSTVESLTPFFSSCGVAELIRVIHKSKSAGTTKTDNRSSEIQAPVGPNRDLYATCQFSTLEEAIRAVNELTDRKSWRGGLRVSL 305
            L +DT+A +V+QVEFYFSD NLPTD ++ K +K    +G+VP+ +I SF K+K+L+K+  A+A AL  S  LVV++   +VRR  P    D D   ++  RTVVA N+P D +++SL   F + G  +++RV     SA +      +   +     +  L+A  ++ TLE+A +AV ELTD+++WR GL V L
Sbjct:  173 LSEDTRAQVVQQVEFYFSDANLPTDNYLMKFIKKD-PEGFVPIPIIGSFRKIKQLTKNYGALAAALRSSSKLVVSEDGKKVRRAEPLADIDLD---EIQGRTVVAENLPEDHSIQSLEKLFGTIGSVKMVRVCEPG-SANSVNNAALAKHSKTDRVVSNKLHALVEYETLEQAEKAVAELTDQRNWRSGLHVRL 361

[Close]

BLAST of mRNA_E-siliculosus-1a_M_contig91.17216.1 vs. uniprot
Match: C1E3K5_MICCC (Uncharacterized protein n=1 Tax=Micromonas commoda (strain RCC299 / NOUM17 / CCMP2709) TaxID=296587 RepID=C1E3K5_MICCC)

HSP 1 Score: 130 bits (328), Expect = 2.270e-29
Identity = 86/192 (44.79%), Postives = 114/192 (59.38%), Query Frame = 0

Query:  121 LVKQVEFYFSDENLPTDAFMKKKVKAGGAQGWVPLKVICSFPKVKKLSKD---IRAIALAL-EDSQALVVAK-ATRVRRKTPFKFPDKDGMADVTSRTVVAVNIPADSTVESLTPFFSSCGVAELIRVIHKSKS--AGTTKTDNRSSEIQAPVGPNRDLYATCQFSTLEEAIRAVNELTDRKSWRGGLRVSL 305
            +VKQVEFYFSD NLPTDAF+ KKV+A    G+VP+ V+C F ++K L K    I  +A  L + S+ALVV++   RVRR TP   PD D + DV +RTVVA N     T+ES+   FS+ G   ++RV H      AG TK     S +     P+  ++A  +F+T ++A RA   L D K WR GLRV L
Sbjct:   67 IVKQVEFYFSDANLPTDAFLMKKVRAD-PNGFVPIGVVCGFNRMKTLLKKHPPIETVAAILRQHSEALVVSEDGIRVRRATPL--PDID-LEDVQARTVVAENFKTQPTIESVRDLFSAAGDVAMVRVRHPGMQTPAGATKP----SGLDLIATPSNAVHALIEFNTRDDAARAAETLNDDKDWRNGLRVRL 250

The following BLAST results are available for this feature:

BLAST of mRNA_E-siliculosus-1a_M_contig91.17216.1 vs. uniprot

BLAST of mRNA_E-siliculosus-1a_M_contig91.17216.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D7FTW6_ECTSI	1.670e-271	90.89	HTH La-type RNA-binding domain-containing protein ...	[more]
A0A6H5JW40_9PHAE	1.420e-45	73.29	HTH La-type RNA-binding domain-containing protein ...	[more]
A0A2R6XE71_MARPO	1.030e-31	41.67	Uncharacterized protein n=3 Tax=Marchantia polymor...	[more]
A0A5J4Y4J7_9CHLO	2.190e-31	41.05	La-related 7 n=1 Tax=Trebouxia sp. A1-2 TaxID=2608...	[more]
D8QWC1_SELML	6.480e-31	39.69	Uncharacterized protein (Fragment) n=2 Tax=Selagin...	[more]
C1N3J9_MICPC	1.760e-30	42.23	Predicted protein n=1 Tax=Micromonas pusilla (stra...	[more]
A0A7R9TLI1_MICPS	2.360e-30	42.23	Hypothetical protein (Fragment) n=1 Tax=Micromonas...	[more]
A0A2K1LA96_PHYPA	1.520e-29	40.72	Uncharacterized protein n=1 Tax=Physcomitrium pate...	[more]
UPI000D1C965E	1.840e-29	40.21	la-related protein 6C n=2 Tax=Selaginella moellend...	[more]
C1E3K5_MICCC	2.270e-29	44.79	Uncharacterized protein n=1 Tax=Micromonas commoda...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 311..331
None	No IPR available	GENE3D	2.40.50.140		coord: 454..531 e-value: 2.9E-5 score: 25.9
None	No IPR available	PANTHER	PTHR22792:SF102	LA-RELATED PROTEIN 6A	coord: 95..394
None	No IPR available	PANTHER	PTHR22792	LUPUS LA PROTEIN-RELATED	coord: 95..394
IPR006630	La-type HTH domain	SMART	SM00715	la	coord: 115..195 e-value: 4.8E-30 score: 115.8
IPR006630	La-type HTH domain	PFAM	PF05383	La	coord: 121..179 e-value: 1.0E-22 score: 79.9
IPR006630	La-type HTH domain	PROSITE	PS50961	HTH_LA	coord: 111..204 score: 23.941
IPR036388	Winged helix-like DNA-binding domain superfamily	GENE3D	1.10.10.10		coord: 113..201 e-value: 2.5E-26 score: 93.3
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 202..313 e-value: 1.2E-7 score: 33.7
IPR036390	Winged helix DNA-binding domain superfamily	SUPERFAMILY	46785	"Winged helix" DNA-binding domain	coord: 113..202
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 209..307

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
E-siliculosus-1a_M_contig91	contig	E-siliculosus-1a_M_contig91:357016..364243 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male	2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90	2022-09-16
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_E-siliculosus-1a_M_contig91.17216.1	mRNA_E-siliculosus-1a_M_contig91.17216.1	Ectocarpus siliculosus Ec864m_EcPH12_78m male	mRNA	E-siliculosus-1a_M_contig91 355948..365089 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_E-siliculosus-1a_M_contig91.17216.1 ID=prot_E-siliculosus-1a_M_contig91.17216.1|Name=mRNA_E-siliculosus-1a_M_contig91.17216.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=636bp
MPAVLRLETYSCRSRVVVGKHDLNLSARRCLQLLRPELLSETHEPASFRR
PLDTETAVAAPASEEASSSVVVEDGENGLASPAAVASSAAVVSSDETSGK
EDTAEVAPPVEELPKDTKAALVKQVEFYFSDENLPTDAFMKKKVKAGGAQ
GWVPLKVICSFPKVKKLSKDIRAIALALEDSQALVVAKATRVRRKTPFKF
PDKDGMADVTSRTVVAVNIPADSTVESLTPFFSSCGVAELIRVIHKSKSA
GTTKTDNRSSEIQAPVGPNRDLYATCQFSTLEEAIRAVNELTDRKSWRGG
LRVSLANGVTVEKALAKLKAASNKKAKQEQKQRVNSRSPVDRGQRNVRDG
QMRSRSLTELELERTAGANGGASSRGGGKPRNSRENQHHHEHEASREDGG
SSGDGGEAAPTTRKPRSVSNVDALFSSSTGGSGGGIENGSPPRHTMGSAG
DGLPRKGVVQTLSSEGWSWIKKDGQGSRKSGNRIPFVMGDVVMKDGEQRQ
PLQKGDHVEYRVWKDTEGRSMAVRVERAKERPRPAGGGVGSGSRSTQAHF
RMAVGPEEGKSGFAAGRGRPIVVAESSPNEVLRRPRGSSMGGVDSKVFVP
SAAASVAAEAAAAAATAAAAVAVAAPSTQQFEDAD*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR035979	RBD_domain_sf
IPR036390	WH_DNA-bd_sf
IPR012677	Nucleotide-bd_a/b_plait_sf
IPR036388	WH-like_DNA-bd_sf
IPR006630	La_HTH