prot_E-siliculosus-1a_M_contig91.17201.1 (polypeptide) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_E-siliculosus-1a_M_contig91.17201.1
Unique Name	prot_E-siliculosus-1a_M_contig91.17201.1
Type	polypeptide
Organism	Ectocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Sequence length	199

Homology

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BLAST of mRNA_E-siliculosus-1a_M_contig91.17201.1 vs. uniprot
Match: D7FNV2_ECTSI (Rab1B, RAB family GTPase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FNV2_ECTSI)

HSP 1 Score: 387 bits (993), Expect = 9.910e-136
Identity = 198/198 (100.00%), Postives = 198/198 (100.00%), Query Frame = 0

Query:    1 DYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDSKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDKESFNNVKQWLHEIDRYACENVNKLLVGNKSDLEAKRAVTTEEAKAFADTLGIEFLETSAKNASNVEKAFMMMASQIKSRMKSQPTGAPRGGTRLTASTQVSGAGSGGGCC 198
            DYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDSKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDKESFNNVKQWLHEIDRYACENVNKLLVGNKSDLEAKRAVTTEEAKAFADTLGIEFLETSAKNASNVEKAFMMMASQIKSRMKSQPTGAPRGGTRLTASTQVSGAGSGGGCC
Sbjct:    6 DYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDSKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDKESFNNVKQWLHEIDRYACENVNKLLVGNKSDLEAKRAVTTEEAKAFADTLGIEFLETSAKNASNVEKAFMMMASQIKSRMKSQPTGAPRGGTRLTASTQVSGAGSGGGCC 203

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BLAST of mRNA_E-siliculosus-1a_M_contig91.17201.1 vs. uniprot
Match: A0A836CKR4_9STRA (Ras related protein PiYpt1 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CKR4_9STRA)

HSP 1 Score: 344 bits (883), Expect = 5.800e-119
Identity = 173/198 (87.37%), Postives = 184/198 (92.93%), Query Frame = 0

Query:    1 DYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDSKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDKESFNNVKQWLHEIDRYACENVNKLLVGNKSDLEAKRAVTTEEAKAFADTLGIEFLETSAKNASNVEKAFMMMASQIKSRMKSQPTGAPRGGTRLTASTQVSGAGSGGGCC 198
            DYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDSKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTD++SF NVKQWLHEIDRYACENVNKLLVGNKSDLEAKRAVTTEEAK FAD+LGIEFLETSAKNA+NV+ AFM M++ IK RMK+QPT   +GGT+LT S QVSG  + GGCC
Sbjct:    6 DYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDSKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDRDSFQNVKQWLHEIDRYACENVNKLLVGNKSDLEAKRAVTTEEAKEFADSLGIEFLETSAKNATNVDSAFMTMSAAIKGRMKTQPTAGAKGGTKLTPSAQVSGGATSGGCC 203

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BLAST of mRNA_E-siliculosus-1a_M_contig91.17201.1 vs. uniprot
Match: A0A835YQS3_9STRA (Ras related protein PiYpt1 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQS3_9STRA)

HSP 1 Score: 340 bits (872), Expect = 2.850e-117
Identity = 171/199 (85.93%), Postives = 183/199 (91.96%), Query Frame = 0

Query:    1 DYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDSKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDKESFNNVKQWLHEIDRYACENVNKLLVGNKSDLEAKRAVTTEEAKAFADTLGIEFLETSAKNASNVEKAFMMMASQIKSRMKSQPTGAPRGGTRLTASTQVSGAGSGG-GCC 198
            DYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRT+ELD KT+KLQIWDTAGQERFRTIT+SYYRGAHGIIVVYDVTD+ESFNNVKQWL EI+RYACENVNKLLVGNKSDLEAKRAVTTEE K FAD++GIEFLETSAKNA NVEKAF+MM+ QIK RMK+ P G  +GGTRLTA  QV G G+GG GCC
Sbjct:    6 DYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTVELDGKTVKLQIWDTAGQERFRTITASYYRGAHGIIVVYDVTDRESFNNVKQWLTEIERYACENVNKLLVGNKSDLEAKRAVTTEEGKEFADSIGIEFLETSAKNADNVEKAFLMMSQQIKGRMKTAPAGGAKGGTRLTAGEQVGGGGAGGSGCC 204

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BLAST of mRNA_E-siliculosus-1a_M_contig91.17201.1 vs. uniprot
Match: W7TST3_9STRA (Rab family gtpase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TST3_9STRA)

HSP 1 Score: 333 bits (854), Expect = 1.520e-114
Identity = 169/198 (85.35%), Postives = 181/198 (91.41%), Query Frame = 0

Query:    1 DYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDSKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDKESFNNVKQWLHEIDRYACENVNKLLVGNKSDLEAKRAVTTEEAKAFADTLGIEFLETSAKNASNVEKAFMMMASQIKSRMKSQPTGAPRGGTRLTASTQVSGAGSGGGCC 198
            DYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIEL+ KTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTD+ESFNNVKQWLHEI+RYA ENVNKLLVGNKSDLE KR V+TE AK FAD+LGI FLETSAKN++NVEKAF+ MASQIK+RMK+QP G   GGT+LTAST V G G+  GCC
Sbjct:    6 DYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELEGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLHEINRYASENVNKLLVGNKSDLEPKRVVSTETAKEFADSLGIAFLETSAKNSTNVEKAFLTMASQIKARMKTQPVGPKTGGTKLTASTAVGGPGASSGCC 203

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BLAST of mRNA_E-siliculosus-1a_M_contig91.17201.1 vs. uniprot
Match: YPT1_PHYIN (Ras-like GTP-binding protein YPT1 n=22 Tax=Oomycota TaxID=4762 RepID=YPT1_PHYIN)

HSP 1 Score: 322 bits (824), Expect = 5.290e-110
Identity = 167/198 (84.34%), Postives = 177/198 (89.39%), Query Frame = 0

Query:    1 DYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDSKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDKESFNNVKQWLHEIDRYACENVNKLLVGNKSDLEAKRAVTTEEAKAFADTLGIEFLETSAKNASNVEKAFMMMASQIKSRMKSQPTGAPRGGTRLTASTQVSGAGSGGGCC 198
            DYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELD KTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTD+ESFNNVKQWLHEIDRYACENVNKLLVGNKSDL AKR V+T+ AK FA++LGIEFLETSAKNA+NVEKAFMMMA+QIK RM + P  AP+ G +LT   QV   G G  CC
Sbjct:    6 DYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLHEIDRYACENVNKLLVGNKSDLTAKRVVSTDAAKEFAESLGIEFLETSAKNAANVEKAFMMMAAQIKKRMANAPV-APKAGVKLTPGQQVPSNG-GSKCC 201

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BLAST of mRNA_E-siliculosus-1a_M_contig91.17201.1 vs. uniprot
Match: K3W769_GLOUD (Uncharacterized protein n=4 Tax=Oomycota TaxID=4762 RepID=K3W769_GLOUD)

HSP 1 Score: 321 bits (822), Expect = 1.070e-109
Identity = 168/198 (84.85%), Postives = 177/198 (89.39%), Query Frame = 0

Query:    1 DYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDSKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDKESFNNVKQWLHEIDRYACENVNKLLVGNKSDLEAKRAVTTEEAKAFADTLGIEFLETSAKNASNVEKAFMMMASQIKSRMKSQPTGAPRGGTRLTASTQVSGAGSGGGCC 198
            DYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELD KTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTD+ESFNNVKQWLHEIDRYACENVNKLLVGNKSDL AKR V+TE AK FA++LGIEFLETSAKNA+NVEKAFMMMA+QIK RM + PT AP+   +L   T V   G GG CC
Sbjct:    6 DYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLHEIDRYACENVNKLLVGNKSDLTAKRVVSTEAAKEFAESLGIEFLETSAKNAANVEKAFMMMAAQIKKRMANAPT-APKPTLKLNQGTNVQQNG-GGKCC 201

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BLAST of mRNA_E-siliculosus-1a_M_contig91.17201.1 vs. uniprot
Match: A0A140YWP8_PHYNI (Ras-related protein (Fragment) n=4 Tax=Peronosporaceae TaxID=4777 RepID=A0A140YWP8_PHYNI)

HSP 1 Score: 320 bits (820), Expect = 1.740e-109
Identity = 162/188 (86.17%), Postives = 173/188 (92.02%), Query Frame = 0

Query:    1 DYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDSKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDKESFNNVKQWLHEIDRYACENVNKLLVGNKSDLEAKRAVTTEEAKAFADTLGIEFLETSAKNASNVEKAFMMMASQIKSRMKSQPTGAPRGGTRLTASTQV 188
            DYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELD KTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTD+ESFNNVKQWLHEIDRYACENVNKLLVGNKSDL AKR V+T+ AK FA++LGIEFLETSA+NA+NVEKAFMMMA+QIK RM + P  AP+ G +LT   QV
Sbjct:    1 DYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLHEIDRYACENVNKLLVGNKSDLTAKRVVSTDAAKEFAESLGIEFLETSARNAANVEKAFMMMAAQIKKRMANAPV-APKAGVKLTPGQQV 187

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BLAST of mRNA_E-siliculosus-1a_M_contig91.17201.1 vs. uniprot
Match: A0A140YWQ0_PHYNI (Ras-related protein (Fragment) n=4 Tax=Phytophthora TaxID=4783 RepID=A0A140YWQ0_PHYNI)

HSP 1 Score: 319 bits (817), Expect = 5.000e-109
Identity = 162/188 (86.17%), Postives = 172/188 (91.49%), Query Frame = 0

Query:    1 DYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDSKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDKESFNNVKQWLHEIDRYACENVNKLLVGNKSDLEAKRAVTTEEAKAFADTLGIEFLETSAKNASNVEKAFMMMASQIKSRMKSQPTGAPRGGTRLTASTQV 188
            DYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELD KTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTD+ESFNNVKQWLHEIDRYACENVNKLLVGNKSDL AKR V+T+ A+ FA++LGIEFLETSAKNA+NVEKAFMMMA+QIK RM + P  APR G +LT    V
Sbjct:    1 DYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLHEIDRYACENVNKLLVGNKSDLTAKRVVSTDAAQEFAESLGIEFLETSAKNAANVEKAFMMMAAQIKKRMANAPV-APRAGVKLTPGQHV 187

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BLAST of mRNA_E-siliculosus-1a_M_contig91.17201.1 vs. uniprot
Match: A0A6A3UIH2_9STRA (Ras-like GTP-binding protein n=90 Tax=Phytophthora TaxID=4783 RepID=A0A6A3UIH2_9STRA)

HSP 1 Score: 321 bits (823), Expect = 8.450e-109
Identity = 163/188 (86.70%), Postives = 173/188 (92.02%), Query Frame = 0

Query:    1 DYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDSKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDKESFNNVKQWLHEIDRYACENVNKLLVGNKSDLEAKRAVTTEEAKAFADTLGIEFLETSAKNASNVEKAFMMMASQIKSRMKSQPTGAPRGGTRLTASTQV 188
            DYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELD KTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTD+ESFNNVKQWLHEIDRYACENVNKLLVGNKSDL AKR V+T+ AK FA++LGIEFLETSAKNA+NVEKAFMMMA+QIK RM + P  AP+ G +LT   QV
Sbjct:    6 DYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLHEIDRYACENVNKLLVGNKSDLTAKRVVSTDAAKEFAESLGIEFLETSAKNAANVEKAFMMMAAQIKKRMANAPV-APKAGVKLTPGQQV 192

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BLAST of mRNA_E-siliculosus-1a_M_contig91.17201.1 vs. uniprot
Match: A0A067C976_SAPPC (Ras-like GTP-binding protein YPT1 n=11 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067C976_SAPPC)

HSP 1 Score: 316 bits (809), Expect = 9.840e-108
Identity = 166/198 (83.84%), Postives = 174/198 (87.88%), Query Frame = 0

Query:    1 DYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDSKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDKESFNNVKQWLHEIDRYACENVNKLLVGNKSDLEAKRAVTTEEAKAFADTLGIEFLETSAKNASNVEKAFMMMASQIKSRMKSQPTGAPRGGTRLTASTQVSGAGSGGGCC 198
            DYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELD KTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTD+ESFNNVKQWLHEIDRYACENVNKLLVGNKSDL AKR V+T+ AK FAD+LGIEFLETSAKNA+NVEKAFMMMA+QIK RM S P  + +    L     VSG    GGCC
Sbjct:    6 DYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLHEIDRYACENVNKLLVGNKSDLTAKRVVSTDAAKDFADSLGIEFLETSAKNAANVEKAFMMMAAQIKKRMASAPMQS-KPAISLQPGQNVSG--KSGGCC 200

The following BLAST results are available for this feature:

BLAST of mRNA_E-siliculosus-1a_M_contig91.17201.1 vs. uniprot

BLAST of mRNA_E-siliculosus-1a_M_contig91.17201.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D7FNV2_ECTSI	9.910e-136	100.00	Rab1B, RAB family GTPase n=2 Tax=Ectocarpus TaxID=...	[more]
A0A836CKR4_9STRA	5.800e-119	87.37	Ras related protein PiYpt1 n=1 Tax=Tribonema minus...	[more]
A0A835YQS3_9STRA	2.850e-117	85.93	Ras related protein PiYpt1 n=1 Tax=Tribonema minus...	[more]
W7TST3_9STRA	1.520e-114	85.35	Rab family gtpase n=2 Tax=Monodopsidaceae TaxID=42...	[more]
YPT1_PHYIN	5.290e-110	84.34	Ras-like GTP-binding protein YPT1 n=22 Tax=Oomycot...	[more]
K3W769_GLOUD	1.070e-109	84.85	Uncharacterized protein n=4 Tax=Oomycota TaxID=476...	[more]
A0A140YWP8_PHYNI	1.740e-109	86.17	Ras-related protein (Fragment) n=4 Tax=Peronospora...	[more]
A0A140YWQ0_PHYNI	5.000e-109	86.17	Ras-related protein (Fragment) n=4 Tax=Phytophthor...	[more]
A0A6A3UIH2_9STRA	8.450e-109	86.70	Ras-like GTP-binding protein n=90 Tax=Phytophthora...	[more]
A0A067C976_SAPPC	9.840e-108	83.84	Ras-like GTP-binding protein YPT1 n=11 Tax=Saprole...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PRINTS	PR00449	RASTRNSFRMNG	coord: 27..43 score: 35.4 coord: 142..164 score: 43.84 coord: 107..120 score: 55.32 coord: 45..67 score: 56.42 coord: 4..25 score: 56.84
None	No IPR available	SMART	SM00175	rab_sub_5	coord: 4..167 e-value: 1.2E-108 score: 377.0
None	No IPR available	SMART	SM00173	ras_sub_4	coord: 1..167 e-value: 1.2E-36 score: 137.8
None	No IPR available	SMART	SM00174	rho_sub_3	coord: 6..167 e-value: 1.6E-14 score: 64.2
None	No IPR available	SMART	SM00177	arf_sub_2	coord: 1..168 e-value: 0.0068 score: -2.2
None	No IPR available	SMART	SM00176	ran_sub_2	coord: 9..198 e-value: 1.5E-6 score: 37.7
None	No IPR available	GENE3D	3.40.50.300		coord: 1..197 e-value: 7.5E-74 score: 249.4
None	No IPR available	PANTHER	PTHR24073	FAMILY NOT NAMED	coord: 1..174
None	No IPR available	PANTHER	PTHR24073:SF963	RAS-RELATED PROTEIN RAB-1A	coord: 1..174
None	No IPR available	PROSITE	PS51419	RAB	coord: 1..198 score: 38.955
IPR001806	Small GTPase	PFAM	PF00071	Ras	coord: 5..165 e-value: 3.3E-67 score: 225.1
IPR005225	Small GTP-binding protein domain	TIGRFAM	TIGR00231	TIGR00231	coord: 2..160 e-value: 1.4E-34 score: 117.3
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 1..179

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
E-siliculosus-1a_M_contig91	contig	E-siliculosus-1a_M_contig91:189968..193518 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male	2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90	2022-09-16
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_E-siliculosus-1a_M_contig91.17201.1	mRNA_E-siliculosus-1a_M_contig91.17201.1	Ectocarpus siliculosus Ec864m_EcPH12_78m male	mRNA	E-siliculosus-1a_M_contig91 189968..193518 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_E-siliculosus-1a_M_contig91.17201.1 ID=prot_E-siliculosus-1a_M_contig91.17201.1|Name=mRNA_E-siliculosus-1a_M_contig91.17201.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=199bp
DYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDSK
TIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDKESFNNVKQWLHE
IDRYACENVNKLLVGNKSDLEAKRAVTTEEAKAFADTLGIEFLETSAKNA
SNVEKAFMMMASQIKSRMKSQPTGAPRGGTRLTASTQVSGAGSGGGCC*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR027417	P-loop_NTPase
IPR005225	Small_GTP-bd_dom
IPR001806	Small_GTPase