prot_E-siliculosus-1a_M_contig91.17195.1 (polypeptide) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_M_contig91.17195.1
Unique Nameprot_E-siliculosus-1a_M_contig91.17195.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Sequence length1274
Homology
BLAST of mRNA_E-siliculosus-1a_M_contig91.17195.1 vs. uniprot
Match: D7FNU7_ECTSI (Hypothetical leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNU7_ECTSI)

HSP 1 Score: 2120 bits (5493), Expect = 0.000e+0
Identity = 1133/1280 (88.52%), Postives = 1156/1280 (90.31%), Query Frame = 0
Query:    1 MMRLVGLDACPGVTSLDVSWNALTELDSACLEGCKELWIVDASHNRLESLGGLSRVMALGYLNLSSNFIPLDGLRPLARAHILELFLGSGRSSKERRRTLCVLPNLWVLDDEFVTAEERRIADDNHQHNGRGGGGTSDHLLPTWNQPSPKRGKTRDKNGSTAIASPSSIVVVKDAGRQHPPQNQEESACKSGFVDLETQGHLTQEFYENVVWKIPSRAVILFTRSPACPELVAWQTSPMDQRVYDQMEPLLARAKLSHDDLHPTSVSFGGEGHGDHRRDGLGGGSVVPSRHRSPRTPCFHFDPLPADDDRGDRGGVYATQLADSVNSLPPPDAGFWRANIRRPRSGERVQVLCDTWSVIVTVDPEAFLVTVAPFEGIQTSAYGGEARIDSRDLYYDPRGWWSHVPAIAGNATAGPSRLHRQSRGLSASGLPRGAGSLNEALEEGDGDEPSQILNGRPSGGDREVVVDSSRNYTDLLLPSAAQQLSPPASPAAAPVSENLSPAVSTEPSTARGLTASSNAAAAPSNPSPAPSVLRSHRCPNNNVVDVFSAEGSWDPVFVVAPPRLVGLQNQTAARRMGGRRARQVAWYRIDGPEVSVAPRPTMPRCSSLTTPFRVGDTPSRQLQQSASTSSIPRLSSKHAPLRLAAVAPSYGGGSSVYARFSQSRGLSVPSINTNSCSTPAPEKLPTAADEAWLELQREMGSLKADNRMLVRDSSRGGXXXXXXXXSGECINTSTIFASSPAMSVVTKSLAENSTVGAQATTDMLAKTLTQTLDSPPSAWKGGNPVSATATVFELTEVDGRPEKDAGEGAGSPTSASLAHETTRSTGNWRVDNQQQEVSPPEECSKQVRMGEGDKPDTAASSHRXXXIPDXGNSTAASATTRKWKPNAFRPLEWFPVPGRQVFLVDPNDAKAAPAAEPVGRPVESDTSNTXXXPPEXXXXXXXXXXXXXXXX-------SSESRQAVGGEGTVEQDKARTRGGQAKDKRGIDSGKGQPGSGSPSTRSPFPTAAVLNNSLLSPATNRDTGGRPRIWTRSRRARSSRSLHSAGALRALAGQKSIGLLADALRPKSPDSLGVITSSSTQVRLEIDPDDVRSRGFHRREEEHLRETRQYVEASDVASGLAVTPSVRPMVSGSTGRRTALTKAVVPHWRHDKRHPARRLPQCQRLTISGWEGAEDAGSPSVDLGRLPTFKPSESLELESSCRNLGAVRDKGGRGASPSGGILKSSFARGNRGGVRVKARPASPHHSDSGLDECFSISSAATSNNNSCCGWRKSDSM 1273
            M RLVGLDACP VTSLDVSWNALTELDSACLE CKELWIVDASHNRLESLGGLSRVMALGYLNLSSNFIPLDGLRPL+RAHILELFLGSGRSSKERRRTLCVLPNLWVLDDEFVTAEERRIADDNHQHNGRG G TSDHLLPTWNQ SPKR KTRDKN STAIASPSSIVVVKDAGR HPPQ Q+ESACKSGFVDLETQGHLTQ+FYENVVWKIPSRAVILFTRSPACPELVAWQTSPMDQ  YDQMEPLLARAKLSHDDLHPTSVSFGGE  GDHRRDGLGGGSVVPSRHRSPRTPCFHFDPLPADDDRGDRGGV+ATQLADSV+SLP PDAGFWRA+IRRPRSGERVQVLCDTWSVIVTVDPEAFLVTVAPFEGIQTSAY GEARIDSRDLYYDPRGWWSHVPAIAGNATAGPSRLHRQSRGLSASGLPRGAGSLNEALEEG GDEPSQILNGRPSGGDREVVVDSSRNYTDLLLPSAAQQLS PAS AAAPVS++LSPAVSTEPS                      SVLRSHRCPNNNVVDVFSAEGSWDPVFVVAPPRLVGLQNQTAARRMGGRRARQVAWYRIDGPEVSVAPRPTMPRCSSL  PFRVGDTPSR LQQSASTSS+PRLSSK APLRLAAVAPS+GGG+SVYARFSQSRGLSVPSINTNSCS PA +KLPTAADEAWLELQREMGSLKADNRML+RDSS+G     XXXX  ECINTSTI ASSPAMSVVTKSLAENSTVGAQATTDMLAKTLT+TLDSP SAWKGGN VSATATVFELT+V GRPEKDAGE A SPTS SL HETTRST NWRVDNQQQEVSPPEECSKQVR+ EGDKPDTAASSHRXXX P X NSTAASATTRKWKPNAFRPLEWFPVPGRQVF VDPND  AAPAAEPVGRPVES TSNT   PPE      XXXXXXXXXX        S  RQAVGGE TVEQDKA  RGGQAK+K  I+SGKGQPG+GSPSTRSPFPTAAVLNN LLSPATNRD G RP IWTRSRRARSSRSLHSAGA RAL  QK  GLLADALRPKSPDSLGVITS STQVRLEIDP DVRSRGFHRREEEH RETRQ VEASDV+SGLAVTP VRPMVSG TG+R A TKAVVPHW+HDKRHPARR PQCQRLTISGWEGAE AGS S DL RLPTFKPSES ELESSCRNLGAV DKGG GA PSGGILKSS ARG RGG RVKARPASPHHSDSGLDECFSISSAATSNNNSCCGWRKSDSM
Sbjct:    1 MTRLVGLDACPSVTSLDVSWNALTELDSACLEECKELWIVDASHNRLESLGGLSRVMALGYLNLSSNFIPLDGLRPLSRAHILELFLGSGRSSKERRRTLCVLPNLWVLDDEFVTAEERRIADDNHQHNGRGWGATSDHLLPTWNQSSPKRDKTRDKNSSTAIASPSSIVVVKDAGRHHPPQKQKESACKSGFVDLETQGHLTQDFYENVVWKIPSRAVILFTRSPACPELVAWQTSPMDQPAYDQMEPLLARAKLSHDDLHPTSVSFGGEVDGDHRRDGLGGGSVVPSRHRSPRTPCFHFDPLPADDDRGDRGGVHATQLADSVDSLPLPDAGFWRASIRRPRSGERVQVLCDTWSVIVTVDPEAFLVTVAPFEGIQTSAYRGEARIDSRDLYYDPRGWWSHVPAIAGNATAGPSRLHRQSRGLSASGLPRGAGSLNEALEEGKGDEPSQILNGRPSGGDREVVVDSSRNYTDLLLPSAAQQLSQPASSAAAPVSKSLSPAVSTEPSXXXXXXXXXXXXXXXXXXXXXXSVLRSHRCPNNNVVDVFSAEGSWDPVFVVAPPRLVGLQNQTAARRMGGRRARQVAWYRIDGPEVSVAPRPTMPRCSSLRMPFRVGDTPSRHLQQSASTSSVPRLSSKQAPLRLAAVAPSHGGGNSVYARFSQSRGLSVPSINTNSCSMPAAKKLPTAADEAWLELQREMGSLKADNRMLIRDSSQG-----XXXXXXECINTSTISASSPAMSVVTKSLAENSTVGAQATTDMLAKTLTRTLDSPLSAWKGGNTVSATATVFELTQVGGRPEKDAGECASSPTSVSLTHETTRSTDNWRVDNQQQEVSPPEECSKQVRVAEGDKPDTAASSHRXXXXPXXXNSTAASATTRKWKPNAFRPLEWFPVPGRQVFRVDPNDVNAAPAAEPVGRPVESGTSNTPNVPPEGQGAEGXXXXXXXXXXXXXXXXCGSSERQAVGGEDTVEQDKAGRRGGQAKEKIRIESGKGQPGNGSPSTRSPFPTAAVLNNGLLSPATNRDMGVRPTIWTRSRRARSSRSLHSAGAFRALDRQKPNGLLADALRPKSPDSLGVITSFSTQVRLEIDPHDVRSRGFHRREEEHCRETRQCVEASDVSSGLAVTPGVRPMVSGPTGQRPARTKAVVPHWQHDKRHPARRQPQCQRLTISGWEGAEGAGSTSGDLMRLPTFKPSESPELESSCRNLGAVSDKGGPGAPPSGGILKSSLARGKRGGARVKARPASPHHSDSGLDECFSISSAATSNNNSCCGWRKSDSM 1275          
BLAST of mRNA_E-siliculosus-1a_M_contig91.17195.1 vs. uniprot
Match: A0A6H5J9X4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J9X4_9PHAE)

HSP 1 Score: 2034 bits (5271), Expect = 0.000e+0
Identity = 1106/1370 (80.73%), Postives = 1139/1370 (83.14%), Query Frame = 0
Query:    1 MMRLVGLDACPGVTSLDVSWNALTELDSACLEGCKELWIVDASHNRLESLGGLSRVMALGYLNLSSNFIPLDGLRPLARAHILELFLGSGRSSKERRRTLCVLPNLWVLDDEFVTAEERRIADDNHQHNGRGGGGTSDHLLPTWNQPSPKRGKTRDKNGSTAIASPSSIVVVKDAGRQHPPQNQEESACKSGFVDLETQGHLTQEFYENVVWKIPSR--------------------------------------------------------------------------AVILFTRSPACPELVAWQTSPMDQRVYDQMEPLLARAKLSHDDLHPTSV-----------------------SFGGEGHGDHRRDGLGGGSVVPSRHRSPRTPCFHFDPLPADDDRGDRGGVYATQLADSVNSLPPPDAGFWRANIRRPRSGERVQVLCDTWSVIVTVDPEAFLVTVAPFEGIQTSAYGGEARIDSRDLYYDPRGWWSHVPAIAGNATAGPSRLHRQSRGLSASGLPRGAGSLNEALEEGDGDEPSQILNGRPSGGDREVVVDSSRNYTDLLLPSAAQQLSPPASPAAAPVSENLSPAVSTEPSTARGLTASSNAAAAPSNPSPAPSVLRSHRCPNNNVVDVFSAEGSWDPVFVVAPPRLVGLQNQTAARRMGGRRARQVAWYRIDGPEVSVAPRPTMPRCSSLTTPFRVGDTPSRQLQQSASTSSIPRLSSKHAPLRLAAVAPSYGGGSSVYARFSQSRGLSVPSINTNSCSTPAPEKLPTAADEAWLELQREMGSLKADNRMLVRDSSRGGXXXXXXXXSGECINTSTIFASSPAMSVVTKSLAENSTVGAQATTDMLAKTLTQTLDSPPSAWKGGNPVSATATVFELTEVDGRPEKDAGEGAGSPTSASLAHETTRSTGNWRVDNQQQEVSPPEECSKQVRMGEGDKPDTAASSHRXXXIPDXGNSTAASATTRKWKPNAFRPLEWFPVPGRQVFLVDPNDAKAAPAAEPVGRPVESDTSNTXXXPPEXXXXXXXXXXXXXXXXSSESRQAVGGEGTVEQDKARTRGGQAKDKRGIDSGKGQPGSGSPSTRSPFPTAAVLNNSLLSPATNRDTGGRPRIWTRSRRARSSRSLHSAGALRALAGQKSIGLLADALRPKSPDSLGVITSSSTQVRLEIDPDDVRSRGFHRREEEHLRETRQYVEASDVASGLAVTPSVRPMVSGSTGRRTALTKAVVPHWRHDKRHPARRLPQCQRLTISGWEGAEDAGSPSVDLGRLPTFKPSESLELESSCRNLGAVRDKGGRGASPSGGILKSSFARGNRGGVRVKARPASPHHSDSGLDECFSISSAATSNNNSCCGWRKSDSM 1273
            M RLVGLDACPGVTSLDVSWNALTELDSACLEGCKELWIVDASHNRLESLGGLSRVMALGYLNLSSNFIPLDGLRPLARAHILEL LGSGRSS+ERRRTLC LPNLWVLDDEFVTAEERRIADD+HQHNG GGG TSDHLLPTWNQPSPKR KTRDK+GSTAIASPSSIVVVKD GR HP Q Q+ SA KSGFVDLETQGHLTQ+FYENVVWKIPSR                                                                          AVILFTRSPACPELVAW+TSPMDQR YDQMEPLLARAKLSHDDLHPTSV                       SFGGE HGDHRRDGLG GSVVPSRHRSPRTPCFH DPLPADDD GDRGGV ATQ A SV+S  PPDAGFWRANIRRPRSGERVQVLC TWSVIVTVDPEAFLVTVAPFE IQ+SAY G+ RIDSRDLYYDPRGWW HVPA+AGNATAGPSRLHRQSRGLSASGLPRGAGSLNEALEEGDGDEPSQILNGRPSGGDREV+VDSSRNYT                  +APVSEN SPAVSTEPSTA GLTASSNAAAAPSN SP PSVLR H CP NNVVDVFSAEGSWDPVFVVAPPRLVGLQNQTAA RMGGRRARQVAWY IDG EVSVAPRPTMPRC+SLT PFRVGDTP RQLQQSASTSSIPRLSSKHA LRLAAV PS+GG +SVYARFSQSRGLSVPSINT+SCS PA EK+PT+ADEAWLELQREMGSLKADNRMLVRDSSRGGXXXXXX  SGECINTSTI ASSPAMSVVTKSLAENSTVGAQATT+MLAKTLT+TLDSP SAWKGGNPVSATATVFELT+VDGRPEKDAGEGA SP+SASLAHETTRST  WRVDNQQQEVSPPE+CSKQVRMGEGDKPD  ASSHR   IPD GNSTAASATTRKWKPNA RPLEWFPVPG+QVFLVDPND  AAPAAEPVGRPVESDTSNT   PPE     XXXXX      SSESR AVGGE  VEQD A  RGGQ  +KR IDSGKG+ G GSPSTRSPFPTAAVLNNSLLSPATNRDTG  PRIWTRSRRARSS+SL SAGAL A+ G KS GLLADALRP+SP SLGV+TSSSTQVRLEIDPDD RSRGFHRREE H RETRQ VEASDV SGLAVTP VRPMVSGSTG+R A TKAV PHWRHDK  PARRLPQCQRLTISG EGA+DAGS S DLGRLPTF PSES ELESSCRNLGAVRDK  RGA PSG ILKSSFARGNRGGVRVKARPASPHH DSGLDE  SISSAATSNNNSCCGW+KSDSM
Sbjct:    1 MTRLVGLDACPGVTSLDVSWNALTELDSACLEGCKELWIVDASHNRLESLGGLSRVMALGYLNLSSNFIPLDGLRPLARAHILELSLGSGRSSEERRRTLCALPNLWVLDDEFVTAEERRIADDSHQHNGSGGGATSDHLLPTWNQPSPKRDKTRDKDGSTAIASPSSIVVVKDVGRHHPSQKQKASAYKSGFVDLETQGHLTQDFYENVVWKIPSRQQRDLLEALPPIITGIDVDHVFESWEDSSGHARGSNQEGEAAWGADDEAGATGLGSIEANVPPRGIGLTRLCRRAVILFTRSPACPELVAWKTSPMDQRAYDQMEPLLARAKLSHDDLHPTSVVAIGAIGTFPGFPIATLCSLPSQSFGGEVHGDHRRDGLGWGSVVPSRHRSPRTPCFHLDPLPADDDSGDRGGVCATQQAASVDSSSPPDAGFWRANIRRPRSGERVQVLCGTWSVIVTVDPEAFLVTVAPFESIQSSAYRGDVRIDSRDLYYDPRGWWCHVPALAGNATAGPSRLHRQSRGLSASGLPRGAGSLNEALEEGDGDEPSQILNGRPSGGDREVIVDSSRNYTG-----------------SAPVSENFSPAVSTEPSTANGLTASSNAAAAPSNLSPTPSVLRIHLCPKNNVVDVFSAEGSWDPVFVVAPPRLVGLQNQTAALRMGGRRARQVAWYHIDGSEVSVAPRPTMPRCTSLTMPFRVGDTPPRQLQQSASTSSIPRLSSKHAHLRLAAVVPSHGGDNSVYARFSQSRGLSVPSINTSSCSRPAAEKVPTSADEAWLELQREMGSLKADNRMLVRDSSRGGXXXXXX--SGECINTSTISASSPAMSVVTKSLAENSTVGAQATTNMLAKTLTRTLDSPLSAWKGGNPVSATATVFELTQVDGRPEKDAGEGASSPSSASLAHETTRSTDIWRVDNQQQEVSPPEDCSKQVRMGEGDKPDATASSHRRRRIPDDGNSTAASATTRKWKPNASRPLEWFPVPGKQVFLVDPNDVMAAPAAEPVGRPVESDTSNTSNVPPEDQGAEXXXXXNCG---SSESRHAVGGEDAVEQDPAGKRGGQVNEKRRIDSGKGKTGGGSPSTRSPFPTAAVLNNSLLSPATNRDTGVTPRIWTRSRRARSSQSLRSAGALGAIGGHKSNGLLADALRPESPGSLGVMTSSSTQVRLEIDPDDERSRGFHRREEGHRRETRQCVEASDVGSGLAVTPGVRPMVSGSTGQRPARTKAVAPHWRHDKTQPARRLPQCQRLTISGLEGAKDAGSTSGDLGRLPTFSPSESPELESSCRNLGAVRDKSCRGAPPSGRILKSSFARGNRGGVRVKARPASPHHLDSGLDERLSISSAATSNNNSCCGWQKSDSM 1348          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig91.17195.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FNU7_ECTSI0.000e+088.52Hypothetical leucine rich repeat protein n=1 Tax=E... [more]
A0A6H5J9X4_9PHAE0.000e+080.73Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 2..131
e-value: 1.1E-12
score: 49.2
NoneNo IPR availablePANTHERPTHR18849LEUCINE RICH REPEAT PROTEINcoord: 6..163
NoneNo IPR availableSUPERFAMILY52058L domain-likecoord: 6..117

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_M_contig91contigE-siliculosus-1a_M_contig91:125011..133170 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_M_contig91.17195.1mRNA_E-siliculosus-1a_M_contig91.17195.1Ectocarpus siliculosus Ec864m_EcPH12_78m malemRNAE-siliculosus-1a_M_contig91 125011..133170 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_M_contig91.17195.1 ID=prot_E-siliculosus-1a_M_contig91.17195.1|Name=mRNA_E-siliculosus-1a_M_contig91.17195.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=1274bp
MMRLVGLDACPGVTSLDVSWNALTELDSACLEGCKELWIVDASHNRLESL
GGLSRVMALGYLNLSSNFIPLDGLRPLARAHILELFLGSGRSSKERRRTL
CVLPNLWVLDDEFVTAEERRIADDNHQHNGRGGGGTSDHLLPTWNQPSPK
RGKTRDKNGSTAIASPSSIVVVKDAGRQHPPQNQEESACKSGFVDLETQG
HLTQEFYENVVWKIPSRAVILFTRSPACPELVAWQTSPMDQRVYDQMEPL
LARAKLSHDDLHPTSVSFGGEGHGDHRRDGLGGGSVVPSRHRSPRTPCFH
FDPLPADDDRGDRGGVYATQLADSVNSLPPPDAGFWRANIRRPRSGERVQ
VLCDTWSVIVTVDPEAFLVTVAPFEGIQTSAYGGEARIDSRDLYYDPRGW
WSHVPAIAGNATAGPSRLHRQSRGLSASGLPRGAGSLNEALEEGDGDEPS
QILNGRPSGGDREVVVDSSRNYTDLLLPSAAQQLSPPASPAAAPVSENLS
PAVSTEPSTARGLTASSNAAAAPSNPSPAPSVLRSHRCPNNNVVDVFSAE
GSWDPVFVVAPPRLVGLQNQTAARRMGGRRARQVAWYRIDGPEVSVAPRP
TMPRCSSLTTPFRVGDTPSRQLQQSASTSSIPRLSSKHAPLRLAAVAPSY
GGGSSVYARFSQSRGLSVPSINTNSCSTPAPEKLPTAADEAWLELQREMG
SLKADNRMLVRDSSRGGGGGGGGGGSGECINTSTIFASSPAMSVVTKSLA
ENSTVGAQATTDMLAKTLTQTLDSPPSAWKGGNPVSATATVFELTEVDGR
PEKDAGEGAGSPTSASLAHETTRSTGNWRVDNQQQEVSPPEECSKQVRMG
EGDKPDTAASSHRRRRIPDDGNSTAASATTRKWKPNAFRPLEWFPVPGRQ
VFLVDPNDAKAAPAAEPVGRPVESDTSNTSNVPPEGQGAEGGGGGDGGNC
GSSESRQAVGGEGTVEQDKARTRGGQAKDKRGIDSGKGQPGSGSPSTRSP
FPTAAVLNNSLLSPATNRDTGGRPRIWTRSRRARSSRSLHSAGALRALAG
QKSIGLLADALRPKSPDSLGVITSSSTQVRLEIDPDDVRSRGFHRREEEH
LRETRQYVEASDVASGLAVTPSVRPMVSGSTGRRTALTKAVVPHWRHDKR
HPARRLPQCQRLTISGWEGAEDAGSPSVDLGRLPTFKPSESLELESSCRN
LGAVRDKGGRGASPSGGILKSSFARGNRGGVRVKARPASPHHSDSGLDEC
FSISSAATSNNNSCCGWRKSDSM*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR032675LRR_dom_sf