prot_E-siliculosus-1a_M_contig90.17137.1 (polypeptide) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_M_contig90.17137.1
Unique Nameprot_E-siliculosus-1a_M_contig90.17137.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Sequence length194
Homology
BLAST of mRNA_E-siliculosus-1a_M_contig90.17137.1 vs. uniprot
Match: D8LKJ9_ECTSI (Arf2B, ARF family GTPase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LKJ9_ECTSI)

HSP 1 Score: 390 bits (1002), Expect = 2.400e-137
Identity = 189/193 (97.93%), Postives = 192/193 (99.48%), Query Frame = 0
Query:    1 MGHVVSRLVHILGTLKEKRLLLLGLDNAGKTSLLYNLHLNEAVGTVPTVGFNMEQVEYNNMVMTIWDVGGQAKLRSLWRYYFVDTDALIFMVDSSDEARIEEARDEMFHVLRDPNMEGCQTVLIMLNKQDVPGAVGPGIVIDRMGLNSAGDNPLRERNWYMQSCCALTGEGVFYGLDWLCEALKKKNKRGAKR 193
            MGHVVSRLVHILGTLKEKRLLLLGLDNAGKTSLLYNLHLNEAVGTVPTVGFNMEQVEYNNMVMTIWDVGGQAKLRSLWRYYFVDTDALIFMVDSSDE RIEEARDEMFHVLRDPNM+GCQTVLIMLNKQDVPGAVGPGIVIDRMGLNSAGDNPLRERNWYMQSCCALTGEGVFYGLDWLCEALKKKN+RGA+R
Sbjct:    1 MGHVVSRLVHILGTLKEKRLLLLGLDNAGKTSLLYNLHLNEAVGTVPTVGFNMEQVEYNNMVMTIWDVGGQAKLRSLWRYYFVDTDALIFMVDSSDENRIEEARDEMFHVLRDPNMDGCQTVLIMLNKQDVPGAVGPGIVIDRMGLNSAGDNPLRERNWYMQSCCALTGEGVFYGLDWLCEALKKKNRRGARR 193          
BLAST of mRNA_E-siliculosus-1a_M_contig90.17137.1 vs. uniprot
Match: D8LKJ1_ECTSI (Arf2A, ARF family GTPase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKJ1_ECTSI)

HSP 1 Score: 283 bits (725), Expect = 3.100e-95
Identity = 129/186 (69.35%), Postives = 159/186 (85.48%), Query Frame = 0
Query:    1 MGHVVSRLVHILGTLKEKRLLLLGLDNAGKTSLLYNLHLNEAVGTVPTVGFNMEQVEYNNMVMTIWDVGGQAKLRSLWRYYFVDTDALIFMVDSSDEARIEEARDEMFHVLRDPNMEGCQTVLIMLNKQDVPGAVGPGIVIDRMGLNSAGDNPLRERNWYMQSCCALTGEGVFYGLDWLCEALKKK 186
            MG +++RL +IL  L+EKRLLLLGLD AGKTSLLY LHLNE V T+PT+GFN+E+VEYN M+MTIWD+GGQ KLR LW +YF++TDALIF+VDS+D  RIEEARDE+FH+L+DPNM+GCQTVLI+LNKQD+PGA+ P  +  ++GL+ AG NPL +RNWYMQ CCA+TGEGV+ GLDWL  AL KK
Sbjct:    1 MGQIIARLANILNGLQEKRLLLLGLDAAGKTSLLYRLHLNEVVTTIPTIGFNVERVEYNRMMMTIWDIGGQTKLRPLWHHYFINTDALIFVVDSNDHERIEEARDELFHILQDPNMDGCQTVLILLNKQDLPGAISPSAMRSKLGLDGAGRNPLMKRNWYMQGCCAVTGEGVYDGLDWLRGALNKK 186          
BLAST of mRNA_E-siliculosus-1a_M_contig90.17137.1 vs. uniprot
Match: UPI001929E330 (ADP-ribosylation factor 1-like n=1 Tax=Dioscorea cayennensis subsp. rotundata TaxID=55577 RepID=UPI001929E330)

HSP 1 Score: 201 bits (510), Expect = 1.320e-62
Identity = 94/185 (50.81%), Postives = 132/185 (71.35%), Query Frame = 0
Query:    1 MGHVVSRLVHILGTLKEKRLLLLGLDNAGKTSLLYNLHLNEAVGTVPTVGFNMEQVEYNNMVMTIWDVGGQAKLRSLWRYYFVDTDALIFMVDSSDEARIEEARDEMFHVLRDPNMEGCQTVLIMLNKQDVPGAVGPGIVIDRMGLNSAGDNPLRERNWYMQSCCALTGEGVFYGLDWLCEALKK 185
            MG  +S LV +L   KE R+L++GLD AGKT++LY L L E + T+PT+GFN+E VEY N+  T+WDVGGQ K+R LWR+YF +T  LIF++DS+D  RI EAR+E+  +L +  + G  T+L+  NKQD+P A+    + D++GL+S     LR+RNWY+QSCCA +GEG++ GLDWL   + K
Sbjct:    1 MGMTISTLVRMLFAKKEMRILMVGLDAAGKTTILYKLKLGEVITTIPTIGFNVETVEYKNVSFTVWDVGGQDKIRPLWRHYFQNTQGLIFVIDSNDRERIAEARNELHRILSEDELRGA-TLLVFANKQDLPNAMRVSEITDKLGLHS-----LRQRNWYIQSCCAASGEGLYEGLDWLSSNISK 179          
BLAST of mRNA_E-siliculosus-1a_M_contig90.17137.1 vs. uniprot
Match: A0A2H9ZX41_9ASPA (ADP-ribosylation factor n=3 Tax=Orchidaceae TaxID=4747 RepID=A0A2H9ZX41_9ASPA)

HSP 1 Score: 197 bits (500), Expect = 4.480e-61
Identity = 94/188 (50.00%), Postives = 133/188 (70.74%), Query Frame = 0
Query:    1 MGHVVSRLVHILGTLKEKRLLLLGLDNAGKTSLLYNLHLNEAVGTVPTVGFNMEQVEYNNMVMTIWDVGGQAKLRSLWRYYFVDTDALIFMVDSSDEARIEEARDEMFHVLRDPNMEGCQTVLIMLNKQDVPGAVGPGIVIDRMGLNSAGDNPLRERNWYMQSCCALTGEGVFYGLDWLCEALKKKNK 188
            MG  +SRLV +L   +E R+L++GLD AGKT++LY L L E + T+PT+GFN+E V+Y N+  T+WDVGGQ K+R LWR+YF +T  LIF++DS+D  RI EARDE+  +L +  ++G  T+LI  NKQD+P A+    + D++GL++     LR+R WY+QS CA TGEG++ GLDWL   +  K K
Sbjct:    1 MGLALSRLVKMLFARREMRILMVGLDAAGKTTILYKLKLGEVITTIPTIGFNVETVDYKNVSFTVWDVGGQDKIRPLWRHYFQNTQGLIFVIDSNDRERISEARDELHRMLSEDELQGA-TLLIFANKQDLPNAMSISEITDKLGLHA-----LRQRRWYIQSACATTGEGLYEGLDWLSNNIFSKAK 182          
BLAST of mRNA_E-siliculosus-1a_M_contig90.17137.1 vs. uniprot
Match: A0A3S3Q2S8_9MAGN (ADP-ribosylation factor n=1 Tax=Cinnamomum micranthum f. kanehirae TaxID=337451 RepID=A0A3S3Q2S8_9MAGN)

HSP 1 Score: 197 bits (500), Expect = 4.480e-61
Identity = 93/188 (49.47%), Postives = 133/188 (70.74%), Query Frame = 0
Query:    1 MGHVVSRLVHILGTLKEKRLLLLGLDNAGKTSLLYNLHLNEAVGTVPTVGFNMEQVEYNNMVMTIWDVGGQAKLRSLWRYYFVDTDALIFMVDSSDEARIEEARDEMFHVLRDPNMEGCQTVLIMLNKQDVPGAVGPGIVIDRMGLNSAGDNPLRERNWYMQSCCALTGEGVFYGLDWLCEALKKKNK 188
            MG  +SRL+  L + KE R+L++GLD AGKT++LY L L E V T+PT+GFN+E V+Y N+  T+WDVGGQ K+R LWR+YF +T  LIF++DS+D+ RI EARDE+  +L +  +    T+L+  NKQD+P A+    + D++GL+S     LR+R WY+QS CA TGEG++ GLDWL   +  K++
Sbjct:    1 MGMTISRLIRQLFSRKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVDYKNVSFTVWDVGGQDKIRPLWRHYFQNTQGLIFVIDSNDKERISEARDELHRMLSEEELRDA-TLLVFANKQDLPNAMSVSEITDKLGLHS-----LRQRRWYIQSACATTGEGLYEGLDWLSNNISTKSR 182          
BLAST of mRNA_E-siliculosus-1a_M_contig90.17137.1 vs. uniprot
Match: A0A1R3GES4_COCAP (ADP-ribosylation factor n=1 Tax=Corchorus capsularis TaxID=210143 RepID=A0A1R3GES4_COCAP)

HSP 1 Score: 196 bits (497), Expect = 2.130e-60
Identity = 94/189 (49.74%), Postives = 132/189 (69.84%), Query Frame = 0
Query:    1 MGHVVSRLVHILGTLKEKRLLLLGLDNAGKTSLLYNLHLNEAVGTVPTVGFNMEQVEYNNMVMTIWDVGGQAKLRSLWRYYFVDTDALIFMVDSSDEARIEEARDEMFHVLRDPNMEGCQTVLIMLNKQDVPGAVGPGIVIDRMGLNSAGDNPLRERNWYMQSCCALTGEGVFYGLDWLCEALKKKNKR 189
            MG  +SRLV +L   KE R+L++GLD AGKT++LY L L E V T+PT+GFN+E VEY N+  T+WDVGGQ K+R LWR+YF +T  LIF+VDS+D  RI EARDE+  +L +  +    T+L+  NKQD+P A+    + D++GLNS     LR+R WY+Q+ CA +G+G++ GLDWL   +  K ++
Sbjct:    1 MGMTISRLVRMLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNVSFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERISEARDELHRMLSEDELRDA-TLLVFANKQDLPNALTVSEITDKLGLNS-----LRQRRWYIQATCATSGQGLYEGLDWLSSNISTKARQ 183          
BLAST of mRNA_E-siliculosus-1a_M_contig90.17137.1 vs. uniprot
Match: A0A7C8ZII1_OPUST (ADP-ribosylation factor n=3 Tax=Pentapetalae TaxID=1437201 RepID=A0A7C8ZII1_OPUST)

HSP 1 Score: 195 bits (495), Expect = 2.490e-60
Identity = 93/187 (49.73%), Postives = 130/187 (69.52%), Query Frame = 0
Query:    1 MGHVVSRLVHILGTLKEKRLLLLGLDNAGKTSLLYNLHLNEAVGTVPTVGFNMEQVEYNNMVMTIWDVGGQAKLRSLWRYYFVDTDALIFMVDSSDEARIEEARDEMFHVLRDPNMEGCQTVLIMLNKQDVPGAVGPGIVIDRMGLNSAGDNPLRERNWYMQSCCALTGEGVFYGLDWLCEALKKKN 187
            MG  +SR V  L   KE R+L++GLD AGKT++LY L L E V T+PT+GFN+E VEY N+  T+WDVGGQ K+R LWR+YF +T  LIF+VDS+D  R+ EARDE+  +L +  +    T+L+  NKQD+P A+    + D++GL+S     LR+R WY+Q+CCA +GEG++ GLDWL   +  K+
Sbjct:    1 MGAALSRWVKTLFAKKEMRILMVGLDAAGKTTILYKLKLGEVVTTIPTIGFNVETVEYKNVSFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVTEARDELHRMLNEDELRDA-TLLVFANKQDLPNAMSVAEITDKLGLHS-----LRQRRWYIQACCATSGEGLYEGLDWLSNNIASKS 181          
BLAST of mRNA_E-siliculosus-1a_M_contig90.17137.1 vs. uniprot
Match: ARF_DUGJA (ADP-ribosylation factor n=3 Tax=Eumetazoa TaxID=6072 RepID=ARF_DUGJA)

HSP 1 Score: 194 bits (494), Expect = 3.770e-60
Identity = 91/189 (48.15%), Postives = 134/189 (70.90%), Query Frame = 0
Query:    1 MGHVVSRLVHILGTLKEKRLLLLGLDNAGKTSLLYNLHLNEAVGTVPTVGFNMEQVEYNNMVMTIWDVGGQAKLRSLWRYYFVDTDALIFMVDSSDEARIEEARDEMFHVLRDPNMEGCQTVLIMLNKQDVPGAVGPGIVIDRMGLNSAGDNPLRERNWYMQSCCALTGEGVFYGLDWLCEALKKKNKR 189
            MG++V+ L+  L   KE R+L++GLD AGKT++LY L L E V T+PT+GFN+E VEY N+  T+WDVGGQ K+R LWR+YF +T  LIF+VDS+D  R+ EAR+E+  +L +  +     +L+  NKQD+P A+ P  + D++GL+S     LR R+WY+Q+ CA +G+G++ GLDWL   LK ++K+
Sbjct:    1 MGNLVTHLLDRLFGKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVNEAREELMRMLNEDELRDA-VLLVFANKQDLPNAMNPAEITDKLGLHS-----LRNRSWYIQATCATSGDGLYEGLDWLSTTLKNRSKK 183          
BLAST of mRNA_E-siliculosus-1a_M_contig90.17137.1 vs. uniprot
Match: A0A8B7CCW4_PHODC (ADP-ribosylation factor 1-like n=2 Tax=Phoenix dactylifera TaxID=42345 RepID=A0A8B7CCW4_PHODC)

HSP 1 Score: 198 bits (503), Expect = 3.910e-60
Identity = 93/188 (49.47%), Postives = 134/188 (71.28%), Query Frame = 0
Query:    1 MGHVVSRLVHILGTLKEKRLLLLGLDNAGKTSLLYNLHLNEAVGTVPTVGFNMEQVEYNNMVMTIWDVGGQAKLRSLWRYYFVDTDALIFMVDSSDEARIEEARDEMFHVLRDPNMEGCQTVLIMLNKQDVPGAVGPGIVIDRMGLNSAGDNPLRERNWYMQSCCALTGEGVFYGLDWLCEALKKKNK 188
            MG  +SR+V +L   +E R+L++GLD AGKT++LY L L E + T+PT+GFN+E VEY N+  T+WDVGGQ K+R LWR+YF +T  LIF+VDS+D+ RI EARDE+  +L +  ++G  T+L+  NKQD+P A+    + D++GL++     LR+R WY+QS CA TGEG++ GLDWL   +  K +
Sbjct:  105 MGLAISRMVRMLFAKREMRILMVGLDAAGKTTILYKLKLGEVITTIPTIGFNVETVEYKNVSFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDKERILEARDELHRMLGEDELQGA-TLLVFANKQDLPNAMSVSEITDKLGLHA-----LRQRRWYIQSACATTGEGLYEGLDWLSSNISDKTR 286          
BLAST of mRNA_E-siliculosus-1a_M_contig90.17137.1 vs. uniprot
Match: A0A2C9UQV1_MANES (ADP-ribosylation factor n=4 Tax=fabids TaxID=91835 RepID=A0A2C9UQV1_MANES)

HSP 1 Score: 194 bits (493), Expect = 5.010e-60
Identity = 93/186 (50.00%), Postives = 131/186 (70.43%), Query Frame = 0
Query:    1 MGHVVSRLVHILGTLKEKRLLLLGLDNAGKTSLLYNLHLNEAVGTVPTVGFNMEQVEYNNMVMTIWDVGGQAKLRSLWRYYFVDTDALIFMVDSSDEARIEEARDEMFHVLRDPNMEGCQTVLIMLNKQDVPGAVGPGIVIDRMGLNSAGDNPLRERNWYMQSCCALTGEGVFYGLDWLCEALKKK 186
            MG  +SRL+ +L   KE R+L++GLD AGKT++LY L L E V T+PT+GFN+E VEY N+  T+WDVGGQ K+R LWR+YF +T  LIF+VDS+D+ RI EARDE+  +L +  +    T+L+  NKQD+P A+    + D++GL+S     LR+R WY+QS CA +G+G++ GLDWL   +  K
Sbjct:    1 MGLAISRLLKLLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNVSFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDKERISEARDELHRMLNEDELRDA-TLLVFANKQDLPNAMTVSEITDKLGLHS-----LRQRRWYIQSTCATSGQGLYEGLDWLSSNISSK 180          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig90.17137.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LKJ9_ECTSI2.400e-13797.93Arf2B, ARF family GTPase n=2 Tax=Ectocarpus TaxID=... [more]
D8LKJ1_ECTSI3.100e-9569.35Arf2A, ARF family GTPase n=1 Tax=Ectocarpus silicu... [more]
UPI001929E3301.320e-6250.81ADP-ribosylation factor 1-like n=1 Tax=Dioscorea c... [more]
A0A2H9ZX41_9ASPA4.480e-6150.00ADP-ribosylation factor n=3 Tax=Orchidaceae TaxID=... [more]
A0A3S3Q2S8_9MAGN4.480e-6149.47ADP-ribosylation factor n=1 Tax=Cinnamomum micrant... [more]
A0A1R3GES4_COCAP2.130e-6049.74ADP-ribosylation factor n=1 Tax=Corchorus capsular... [more]
A0A7C8ZII1_OPUST2.490e-6049.73ADP-ribosylation factor n=3 Tax=Pentapetalae TaxID... [more]
ARF_DUGJA3.770e-6048.15ADP-ribosylation factor n=3 Tax=Eumetazoa TaxID=60... [more]
A0A8B7CCW4_PHODC3.910e-6049.47ADP-ribosylation factor 1-like n=2 Tax=Phoenix dac... [more]
A0A2C9UQV1_MANES5.010e-6050.00ADP-ribosylation factor n=4 Tax=fabids TaxID=91835... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006689Small GTPase superfamily, ARF/SAR typePRINTSPR00328SAR1GTPBPcoord: 47..71
score: 26.82
coord: 19..42
score: 54.9
coord: 120..141
score: 32.62
coord: 157..181
score: 22.35
coord: 74..99
score: 35.52
IPR006689Small GTPase superfamily, ARF/SAR typePFAMPF00025Arfcoord: 11..182
e-value: 4.2E-56
score: 189.2
NoneNo IPR availableSMARTSM00178sar_sub_1coord: 1..183
e-value: 4.6E-15
score: 66.1
NoneNo IPR availableSMARTSM00177arf_sub_2coord: 1..187
e-value: 5.2E-69
score: 245.2
NoneNo IPR availableGENE3D3.40.50.300coord: 18..183
e-value: 2.8E-54
score: 185.1
NoneNo IPR availablePANTHERPTHR11711ADP RIBOSYLATION FACTOR-RELATEDcoord: 1..186
NoneNo IPR availablePANTHERPTHR11711:SF314coord: 1..186
NoneNo IPR availablePROSITEPS51417ARFcoord: 11..183
score: 19.625
IPR005225Small GTP-binding protein domainTIGRFAMTIGR00231TIGR00231coord: 16..133
e-value: 4.1E-18
score: 63.7
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 16..189

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_M_contig90contigE-siliculosus-1a_M_contig90:272493..277840 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_M_contig90.17137.1mRNA_E-siliculosus-1a_M_contig90.17137.1Ectocarpus siliculosus Ec864m_EcPH12_78m malemRNAE-siliculosus-1a_M_contig90 272136..278101 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_M_contig90.17137.1 ID=prot_E-siliculosus-1a_M_contig90.17137.1|Name=mRNA_E-siliculosus-1a_M_contig90.17137.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=194bp
MGHVVSRLVHILGTLKEKRLLLLGLDNAGKTSLLYNLHLNEAVGTVPTVG
FNMEQVEYNNMVMTIWDVGGQAKLRSLWRYYFVDTDALIFMVDSSDEARI
EEARDEMFHVLRDPNMEGCQTVLIMLNKQDVPGAVGPGIVIDRMGLNSAG
DNPLRERNWYMQSCCALTGEGVFYGLDWLCEALKKKNKRGAKR*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR027417P-loop_NTPase
IPR005225Small_GTP-bd_dom
IPR006689Small_GTPase_ARF/SAR