prot_E-siliculosus-1a_M_contig90.17131.1 (polypeptide) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_E-siliculosus-1a_M_contig90.17131.1
Unique Name	prot_E-siliculosus-1a_M_contig90.17131.1
Type	polypeptide
Organism	Ectocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Sequence length	734

Homology

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BLAST of mRNA_E-siliculosus-1a_M_contig90.17131.1 vs. uniprot
Match: D8LKJ5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKJ5_ECTSI)

HSP 1 Score: 335 bits (859), Expect = 8.120e-101
Identity = 273/276 (98.91%), Postives = 273/276 (98.91%), Query Frame = 0

Query:   39 MGKSGRTLLVALLALLVSPDVLGFSLSPAGARRSRQQHQRAPRGKRSSAARTLNMAADPRFDSLVDRVETAAKAPRESIPVFKSQEADAPATIAEVKEQVXXXXXXXXXXXXXXXXXXXXXXXAYDSAVSVGSVGLQVAEGLAVLAAVPAILTALNKQKATQERKDKNQARADELAKGRQARADAKAAALAQAAIDRKEKQEGIAQRIEAAXXXXXXXXXXXXXXXXXXXXXXXXXXAAXXXXXXXXXXXXXXXXXRREASRKEREIRMAAKAAEE 314
            MGKSGRTLLVALLALLVSPDVLGFSLSPAGARRSRQQHQRAPRGKRSSAARTLNMAADPRFD LVDRVETAAKAPRESIPVFKSQEADAPATIAEVKEQVXXXXXXXXXXXXXXXXXXXXXXXAYDSAVSVGSVGLQVAEGLAVLAAVPAILTALNKQKATQERKDKNQARADELAKGRQARADAKAAALAQAAIDRKEKQEGIAQRIEAA XXXXXXXXXXXXXXXXXXXXXXXXXAA XXXXXXXXXXXXXXXXRREASRKEREIRMAAKAAEE
Sbjct:    1 MGKSGRTLLVALLALLVSPDVLGFSLSPAGARRSRQQHQRAPRGKRSSAARTLNMAADPRFDGLVDRVETAAKAPRESIPVFKSQEADAPATIAEVKEQVXXXXXXXXXXXXXXXXXXXXXXXAYDSAVSVGSVGLQVAEGLAVLAAVPAILTALNKQKATQERKDKNQARADELAKGRQARADAKAAALAQAAIDRKEKQEGIAQRIEAARXXXXXXXXXXXXXXXXXXXXXXXXXAAAXXXXXXXXXXXXXXXXRREASRKEREIRMAAKAAEE 276

[Close]

BLAST of mRNA_E-siliculosus-1a_M_contig90.17131.1 vs. uniprot
Match: A0A6H5JMY3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMY3_9PHAE)

HSP 1 Score: 328 bits (840), Expect = 9.040e-96
Identity = 256/276 (92.75%), Postives = 258/276 (93.48%), Query Frame = 0

Query:   39 MGKSGRTLLVALLALLVSPDVLGFSLSPAGARRSRQQHQRAPRGKRSSAARTLNMAADPRFDSLVDRVETAAKAPRESIPVFKSQEADAPATIAEVKEQVXXXXXXXXXXXXXXXXXXXXXXXAYDSAVSVGSVGLQVAEGLAVLAAVPAILTALNKQKATQERKDKNQARADELAKGRQARADAKAAALAQAAIDRKEKQEGIAQRIEAAXXXXXXXXXXXXXXXXXXXXXXXXXXAAXXXXXXXXXXXXXXXXXRREASRKEREIRMAAKAAEE 314
            MGKSGRTLLVALLALLVSPDVLGFSLSPAGARRSRQQHQRAPRGKR SAARTLNMAADPRFDSLVDRVETAAKAP ES+PVFKSQEADAPATIAEVKEQV  XXXXXXXXX            AYDSAVSVGSVGLQV EGLAVLAAVPAILTALNKQKATQERK+KNQARADELAKGRQARADAKAAALAQAAIDRKEKQEGIAQRIEAA XXXXXXXXXXXXXXXXXXXXXXXXXAAXXXXXXXXXXXXXXXXXRREASRKEREIRMAAKAAEE
Sbjct:    1 MGKSGRTLLVALLALLVSPDVLGFSLSPAGARRSRQQHQRAPRGKRLSAARTLNMAADPRFDSLVDRVETAAKAPVESVPVFKSQEADAPATIAEVKEQVAPXXXXXXXXXRPPSVLAAGSGQAYDSAVSVGSVGLQVVEGLAVLAAVPAILTALNKQKATQERKEKNQARADELAKGRQARADAKAAALAQAAIDRKEKQEGIAQRIEAARXXXXXXXXXXXXXXXXXXXXXXXXXAAXXXXXXXXXXXXXXXXXRREASRKEREIRMAAKAAEE 276

The following BLAST results are available for this feature:

BLAST of mRNA_E-siliculosus-1a_M_contig90.17131.1 vs. uniprot

BLAST of mRNA_E-siliculosus-1a_M_contig90.17131.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
D8LKJ5_ECTSI	8.120e-101	98.91	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A6H5JMY3_9PHAE	9.040e-96	92.75	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 268..657
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 1..45
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 46..64
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 65..734

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
E-siliculosus-1a_M_contig90	contig	E-siliculosus-1a_M_contig90:235794..244193 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male	2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90	2022-09-16
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_E-siliculosus-1a_M_contig90.17131.1	mRNA_E-siliculosus-1a_M_contig90.17131.1	Ectocarpus siliculosus Ec864m_EcPH12_78m male	mRNA	E-siliculosus-1a_M_contig90 235794..244193 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_E-siliculosus-1a_M_contig90.17131.1 ID=prot_E-siliculosus-1a_M_contig90.17131.1|Name=mRNA_E-siliculosus-1a_M_contig90.17131.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=734bp
LLSTAILLYPGDSCCAQRERNRPLVVRPLLSAVFPEKNMGKSGRTLLVAL
LALLVSPDVLGFSLSPAGARRSRQQHQRAPRGKRSSAARTLNMAADPRFD
SLVDRVETAAKAPRESIPVFKSQEADAPATIAEVKEQVAPAATKVVAEQR
PPSASAAGSGQAYDSAVSVGSVGLQVAEGLAVLAAVPAILTALNKQKATQ
ERKDKNQARADELAKGRQARADAKAAALAQAAIDRKEKQEGIAQRIEAAR
IEEERQESVRQMVLEAQVKKQAEEAAAAKVAAEEAAAEKAASDARREASR
KEREIRMAAKAAEEAKAAEEAKAKQEAAAAKAAEEAKAAEEAKAAEEAKA
AEEAKAAEEAKAAEEAKAAEEAKAAEEAKAAEEAKAAEEAKAAEEAKAAA
EAKAAEEAKAAAEAKAAEEAKAAAEAKAAEEAKAAAEAKAAEEAKAAAEA
KAAEEAEAKAAEEAKAAAEAKAAADAKAAEEAEAKAAEDAKAAEEAEAAA
EAKAISIQLAQAEKAKAAKAAEAKAAEEAKEAEAKAISRQLAQAEKAKAA
KAAEAKAAEEAKEAEAKAISRQLAQAEEAKAAKAAEAKAAEEAKEAEAKA
ISRQLAQAEEAKAAKAAEAKAEEEAKEAEAKAISRQLAQAEEAKAAAEAK
AAAEAKAAADAKAGEEAKAAADLKAKQEAQEKEAKAPAEAMAAKVENEQE
APVRPSSLPPSDARSVFFREWYSAGLRGADDGAF