prot_E-siliculosus-1a_M_contig90.17130.1 (polypeptide) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_M_contig90.17130.1
Unique Nameprot_E-siliculosus-1a_M_contig90.17130.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Sequence length272
Homology
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BLAST of mRNA_E-siliculosus-1a_M_contig90.17130.1 vs. uniprot
Match: D8LKJ4_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LKJ4_ECTSI)

HSP 1 Score: 375 bits (962), Expect = 9.230e-129
Identity = 252/271 (92.99%), Postives = 254/271 (93.73%), Query Frame = 0 
Query:    1 MSAAVSSGAASASAIGEQEEERQDAAATLAEIDGCLRRWKAARHEGQAVLTDLSNALLLRTYVDKGGGXXXXXXGRAATDGAVWGALAGAGTTVSRVSVATEARARRLHGDLSALQDAMVAAAGELRRHAQEVRRRWVSARVGGEGHRPSGSSSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVGGGYGLVDVADTTSQVAEMLMKEALVTATVVQGVGQEHGRDDREALTVYAAAWMMQPYVDAGRLKELEVMVGGQGRGKRG 271
            MSAAVSSGA  AS IGEQE+ERQDAAATL EIDGCLRRWKAARHEGQAVLTDLSNALLLRTYVDKG  XXXXXX RAATDGAVWGALAGAGTTVSRVSVATE RARRLHGDLSALQDAMVAAAGELRRHA+EVRRRWVSAR GGE HR SGSSSG   XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  VGGGY LVDVADTTSQVAEMLMKEALVTATVVQGVGQEHGRDDREALTVYAAAWMMQPYVDAGRLKELEVMVGGQGRGKRG
Sbjct:    1 MSAAVSSGA--ASGIGEQEKERQDAAATLDEIDGCLRRWKAARHEGQAVLTDLSNALLLRTYVDKG--XXXXXXXRAATDGAVWGALAGAGTTVSRVSVATEHRARRLHGDLSALQDAMVAAAGELRRHAREVRRRWVSARAGGEDHRTSGSSSGAKAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAVGGGYALVDVADTTSQVAEMLMKEALVTATVVQGVGQEHGRDDREALTVYAAAWMMQPYVDAGRLKELEVMVGGQGRGKRG 267
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BLAST of mRNA_E-siliculosus-1a_M_contig90.17130.1 vs. uniprot
Match: A0A835ZE08_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZE08_9STRA)

HSP 1 Score: 53.5 bits (127), Expect = 4.860e-5
Identity = 28/66 (42.42%), Postives = 35/66 (53.03%), Query Frame = 0 
Query:  193 GGYGLVDVADTTSQVAEMLMKEALVTATVVQGVGQEHGRDDREALTVYAAAWMMQPYVDAGRLKEL 258
            GGY   D+A     +  ML +E  V   V    G    RD    LT+YAAAWMMQPY++ G  K+L
Sbjct:  116 GGYSAADIAQAALALGRMLEREVAVAEAVCADAGDCSSRD---TLTLYAAAWMMQPYMERGLWKDL 178
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig90.17130.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LKJ4_ECTSI9.230e-12992.99Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835ZE08_9STRA4.860e-542.42Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_M_contig90contigE-siliculosus-1a_M_contig90:233613..234428 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_M_contig90.17130.1mRNA_E-siliculosus-1a_M_contig90.17130.1Ectocarpus siliculosus Ec864m_EcPH12_78m malemRNAE-siliculosus-1a_M_contig90 232679..235290 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_M_contig90.17130.1 ID=prot_E-siliculosus-1a_M_contig90.17130.1|Name=mRNA_E-siliculosus-1a_M_contig90.17130.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=272bp
MSAAVSSGAASASAIGEQEEERQDAAATLAEIDGCLRRWKAARHEGQAVL
TDLSNALLLRTYVDKGGGGGGGRGGRAATDGAVWGALAGAGTTVSRVSVA
TEARARRLHGDLSALQDAMVAAAGELRRHAQEVRRRWVSARVGGEGHRPS
GSSSGAKARVEAAAVVAVAVQDGDGAGCGSGAGGGGGAAAVGGGYGLVDV
ADTTSQVAEMLMKEALVTATVVQGVGQEHGRDDREALTVYAAAWMMQPYV
DAGRLKELEVMVGGQGRGKRG*
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