mRNA_E-siliculosus-1a_M_contig90.17130.1 (mRNA) Ectocarpus siliculosus Ec864m_EcPH12_78m male
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_M_contig90.17130.1 vs. uniprot
Match: D8LKJ4_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LKJ4_ECTSI) HSP 1 Score: 375 bits (963), Expect = 1.300e-122 Identity = 252/271 (92.99%), Postives = 254/271 (93.73%), Query Frame = 3
Query: 441 MSAAVSSGAASASAIGEQEEERQDAAATLAEIDGCLRRWKAARHEGQAVLTDLSNALLLRTYVDKGGGXXXXXXGRAATDGAVWGALAGAGTTVSRVSVATEARARRLHGDLSALQDAMVAAAGELRRHAQEVRRRWVSARVGGEGHRPSGSSSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVGGGYGLVDVADTTSQVAEMLMKEALVTATVVQGVGQEHGRDDREALTVYAAAWMMQPYVDAGRLKELEVMVGGQGRGKRG 1253
MSAAVSSGAAS IGEQE+ERQDAAATL EIDGCLRRWKAARHEGQAVLTDLSNALLLRTYVDKG XXXXXX RAATDGAVWGALAGAGTTVSRVSVATE RARRLHGDLSALQDAMVAAAGELRRHA+EVRRRWVSAR GGE HR SGSSSG XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX VGGGY LVDVADTTSQVAEMLMKEALVTATVVQGVGQEHGRDDREALTVYAAAWMMQPYVDAGRLKELEVMVGGQGRGKRG
Sbjct: 1 MSAAVSSGAASG--IGEQEKERQDAAATLDEIDGCLRRWKAARHEGQAVLTDLSNALLLRTYVDKG--XXXXXXXRAATDGAVWGALAGAGTTVSRVSVATEHRARRLHGDLSALQDAMVAAAGELRRHAREVRRRWVSARAGGEDHRTSGSSSGAKAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAVGGGYALVDVADTTSQVAEMLMKEALVTATVVQGVGQEHGRDDREALTVYAAAWMMQPYVDAGRLKELEVMVGGQGRGKRG 267
BLAST of mRNA_E-siliculosus-1a_M_contig90.17130.1 vs. uniprot
Match: A0A835Z1C5_9STRA (Costars domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z1C5_9STRA) HSP 1 Score: 98.2 bits (243), Expect = 4.190e-21 Identity = 44/59 (74.58%), Postives = 55/59 (93.22%), Query Frame = 1
Query: 7 GAVGVSFGNLFDDEEGQQFFEAIVGTLRAAKKRGVVDFKGQMLLKGAHDDVIITLLKPI 183
G +GV++G LFDDEEGQ +FEA++GTL+AAKKRGVVDF+GQMLLKGAHD V++TLLKP+
Sbjct: 26 GKIGVTYGVLFDDEEGQDYFEALMGTLKAAKKRGVVDFQGQMLLKGAHDSVMVTLLKPL 84
BLAST of mRNA_E-siliculosus-1a_M_contig90.17130.1 vs. uniprot
Match: B7FY17_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7FY17_PHATC) HSP 1 Score: 81.6 bits (200), Expect = 3.950e-15 Identity = 37/55 (67.27%), Postives = 47/55 (85.45%), Query Frame = 1
Query: 7 GAVGVSFGNLFDDEEGQQFFEAIVGTLRAAKKRGVVDFKGQMLLKGAHDDVIITL 171
G+ V FG LFDD+ QQF+EA+VGTL++AK+RGV+DFKGQMLLKG HD VII++
Sbjct: 37 GSPQVKFGELFDDDNVQQFYEALVGTLKSAKRRGVIDFKGQMLLKGMHDSVIISI 91
BLAST of mRNA_E-siliculosus-1a_M_contig90.17130.1 vs. uniprot
Match: G0QMS5_ICHMG (Costars domain-containing protein n=1 Tax=Ichthyophthirius multifiliis (strain G5) TaxID=857967 RepID=G0QMS5_ICHMG) HSP 1 Score: 80.9 bits (198), Expect = 4.830e-15 Identity = 37/57 (64.91%), Postives = 47/57 (82.46%), Query Frame = 1
Query: 1 TIGAVGVSFGNLFDDEEGQQFFEAIVGTLRAAKKRGVVDFKGQMLLKGAHDDVIITL 171
T+G V FG LFDDE+ QQ++EA+VGTL+AAKK+GVVDF+GQ+LLKG HD + I L
Sbjct: 24 TLGKFSVPFGQLFDDEKAQQYYEALVGTLKAAKKQGVVDFQGQILLKGQHDKIEIIL 80
BLAST of mRNA_E-siliculosus-1a_M_contig90.17130.1 vs. uniprot
Match: A0A5B8MVS8_9CHLO (Costars domain-containing protein n=1 Tax=Chloropicon primus TaxID=1764295 RepID=A0A5B8MVS8_9CHLO) HSP 1 Score: 80.1 bits (196), Expect = 1.160e-14 Identity = 37/52 (71.15%), Postives = 46/52 (88.46%), Query Frame = 1
Query: 19 VSFGNLFDDEEGQQFFEAIVGTLRAAKKRGVVDFKGQMLLKGAHDDVIITLL 174
V FG LF+DE+ +Q++EAIVGTL+AAKKRG +DFKGQMLLKGAHDDV + L+
Sbjct: 33 VKFGVLFEDEKVEQYYEAIVGTLKAAKKRGFIDFKGQMLLKGAHDDVDVILV 84
BLAST of mRNA_E-siliculosus-1a_M_contig90.17130.1 vs. uniprot
Match: A0A2R5G5I4_9STRA (Costars family protein ABRACL n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5G5I4_9STRA) HSP 1 Score: 77.0 bits (188), Expect = 1.360e-13 Identity = 36/52 (69.23%), Postives = 45/52 (86.54%), Query Frame = 1
Query: 19 VSFGNLFDDEEGQQFFEAIVGTLRAAKKRGVVDFKGQMLLKGAHDDVIITLL 174
V FG LFDD++ QQF+EAIVGTL+AA+ +G +D+KG +LLKGAHDDV ITLL
Sbjct: 33 VKFGVLFDDDKTQQFYEAIVGTLKAARTKGFIDWKGMILLKGAHDDVDITLL 84
BLAST of mRNA_E-siliculosus-1a_M_contig90.17130.1 vs. uniprot
Match: A0A139AT62_GONPJ (C6orf115 protein n=1 Tax=Gonapodya prolifera (strain JEL478) TaxID=1344416 RepID=A0A139AT62_GONPJ) HSP 1 Score: 76.6 bits (187), Expect = 1.490e-13 Identity = 35/57 (61.40%), Postives = 45/57 (78.95%), Query Frame = 1
Query: 7 GAVGVSFGNLFDDEEGQQFFEAIVGTLRAAKKRGVVDFKGQMLLKGAHDDVIITLLK 177
G V V +G LF D++ FEA++GTLRAAKKR +VDFKG+MLL+G HDDV++ LLK
Sbjct: 24 GIVSVKYGKLFSDDKVANTFEALLGTLRAAKKRKIVDFKGEMLLQGVHDDVVVILLK 80
BLAST of mRNA_E-siliculosus-1a_M_contig90.17130.1 vs. uniprot
Match: F2UD85_SALR5 (Costars domain-containing protein n=1 Tax=Salpingoeca rosetta (strain ATCC 50818 / BSB-021) TaxID=946362 RepID=F2UD85_SALR5) HSP 1 Score: 77.8 bits (190), Expect = 1.500e-13 Identity = 34/57 (59.65%), Postives = 49/57 (85.96%), Query Frame = 1
Query: 7 GAVGVSFGNLFDDEEGQQFFEAIVGTLRAAKKRGVVDFKGQMLLKGAHDDVIITLLK 177
G + V+FG +F DE +Q E++VGT++AA+KRG++DFKGQ+LL+GAHDDV++TLLK
Sbjct: 59 GKIQVTFGEIFRDEVLEQQLESLVGTMKAARKRGLIDFKGQILLQGAHDDVVVTLLK 115
BLAST of mRNA_E-siliculosus-1a_M_contig90.17130.1 vs. uniprot
Match: A0A6G0X2G9_9STRA (Costars domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0X2G9_9STRA) HSP 1 Score: 75.1 bits (183), Expect = 5.180e-13 Identity = 35/53 (66.04%), Postives = 44/53 (83.02%), Query Frame = 1
Query: 16 GVSFGNLFDDEEGQQFFEAIVGTLRAAKKRGVVDFKGQMLLKGAHDDVIITLL 174
GV+FG LFDDE Q FEA++GTLRAAK++ V+DF+GQ+LLKG HD+V I LL
Sbjct: 31 GVTFGILFDDERCQDLFEALMGTLRAAKRKKVIDFQGQLLLKGPHDNVFIRLL 83
BLAST of mRNA_E-siliculosus-1a_M_contig90.17130.1 vs. uniprot
Match: A0A7S2IC92_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2IC92_9STRA) HSP 1 Score: 80.1 bits (196), Expect = 1.360e-12 Identity = 36/58 (62.07%), Postives = 48/58 (82.76%), Query Frame = 1
Query: 7 GAVGVSFGNLFDDEEGQQFFEAIVGTLRAAKKRGVVDFKGQMLLKGAHDDVIITLLKP 180
G V+FG LFDD+E Q ++EA+VGTL++AK+RGVV FKGQMLLKG HD+V+I ++ P
Sbjct: 262 GEPSVAFGELFDDDEVQNYYEALVGTLKSAKRRGVVHFKGQMLLKGMHDNVMIDIVNP 319 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig90.17130.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_M_contig90.17130.1 >prot_E-siliculosus-1a_M_contig90.17130.1 ID=prot_E-siliculosus-1a_M_contig90.17130.1|Name=mRNA_E-siliculosus-1a_M_contig90.17130.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=272bp MSAAVSSGAASASAIGEQEEERQDAAATLAEIDGCLRRWKAARHEGQAVLback to top mRNA from alignment at E-siliculosus-1a_M_contig90:232679..235290+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_M_contig90.17130.1 ID=mRNA_E-siliculosus-1a_M_contig90.17130.1|Name=mRNA_E-siliculosus-1a_M_contig90.17130.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=mRNA|length=2612bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig90:232679..235290+ (Ectocarpus siliculosus Ec864m_EcPH12_78m male)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_M_contig90:232679..235290+ >mRNA_E-siliculosus-1a_M_contig90.17130.1 ID=mRNA_E-siliculosus-1a_M_contig90.17130.1|Name=mRNA_E-siliculosus-1a_M_contig90.17130.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=CDS|length=1632bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig90:232679..235290+ (Ectocarpus siliculosus Ec864m_EcPH12_78m male)back to top |